F275553

General Info

Members Datasets Scaffolds Average Seq Length
180 77 282 356

Family's Representative Sequence

Representative Sequence 3300009551|Ga0105238_10213987|Ga0105238_102139872
Length 374
Sequence MDERVMKSCVGGPVPEWDLVHRLQIKEPVGPEIKDFGANFCTNSCFMDVIEPSLLEKQWPIMGVAIAFAGIAIGPYLYWLTNIRYPDPGGLLGDIFAALISLSFGSIVWKLGRGLFFGLRYHPIRFHRETRKLYAIRERRFFAKPGEGDVVWEAPWTDESIFCLHREVTPFETVFHIRHYTVDDEGQVTRVFSIGREWTGESQIRLALAQWNYWCKYMNDGPSELPKPMLFHTQHETPRESFLFSLYSFGMNAPVFMRLLAMPAVLIFTAMRMLANATCRAPVWPEAIEKLSRIALDDPYAEPRAGTPVGWAQTILAQQRGEYPEDSNARVDGWTGEPDGRTYAAAWLENPEAATRTATHAMRVARERARATGS

Samples

Sample ID Description Type Environment
1 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
5 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
6 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
14 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
15 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
16 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
17 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
18 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
19 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
20 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
21 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
22 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
25 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
26 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
31 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
43 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
44 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
45 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
46 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
47 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
48 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
53 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
54 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
55 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
56 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
57 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
58 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
59 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
60 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
61 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
62 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
63 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
64 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
65 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
66 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
67 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
68 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
69 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
70 2904564687 Burkholderia sp. 571 Isolate Unclassified
71 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
72 2928108538 Paraburkholderia terricola 1595 Isolate Rhizosphere
73 2928503688 Paraburkholderia terricola 1263 Isolate Rhizosphere
74 2928536128 Burkholderia sola 565 Isolate Unclassified
75 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
76 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
77 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.78
Metatranscriptomes 0
Isolates 7.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10
Nodule 0
Rhizoplane 0.56
Rhizosphere 84.44
Stem 0
Stem Tuber 0
Unclassified 0.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105238_10213987 3300009551 Bacteria 1904
2 JGI24736J21556_1001157 3300001904 Bacteria 4842
3 JGI24735J21928_10002923 3300002067 Bacteria 5878
4 JGI24735J21928_10004488 3300002067 Bacteria 4692
5 Ga0055532_1000744 3300003758 Bacteria 11865
6 Ga0055527_1000536 3300003760 Bacteria 12768
7 Ga0055527_1002911 3300003760 Bacteria 2709
8 Ga0055535_1000943 3300003761 Bacteria 19288
9 Ga0055542_1001407 3300003762 Bacteria 12144
10 Ga0055529_1000516 3300003763 Bacteria 33894
11 Ga0070658_10015243 3300005327 Bacteria 6150
12 Ga0070658_10044158 3300005327 Bacteria 3601
13 Ga0070658_10230844 3300005327 Bacteria 1567
14 Ga0070660_100009295 3300005339 Bacteria 6907
15 Ga0070660_100017125 3300005339 Bacteria 5276
16 Ga0070660_100046447 3300005339 Bacteria 3328
17 Ga0068855_100044195 3300005563 Bacteria 5273
18 Ga0068855_100083486 3300005563 Bacteria 3700
19 Ga0068856_100134063 3300005614 Bacteria 2482
20 Ga0068856_100154065 3300005614 Bacteria 2308
21 Ga0105251_10002396 3300009011 Bacteria 14812
22 Ga0105240_10008496 3300009093 Bacteria 14685
23 Ga0105240_10056989 3300009093 Bacteria 4886
24 Ga0105240_10110847 3300009093 Bacteria 3321
25 Ga0105240_10311545 3300009093 Bacteria 1797
26 Ga0105241_10019326 3300009174 Bacteria 5023
27 Ga0105237_10014346 3300009545 Bacteria 8292
28 Ga0105237_10041082 3300009545 Bacteria 4665
29 Ga0105237_10177532 3300009545 Bacteria 2130
30 Ga0105239_10006011 3300010375 Bacteria 14120
31 Ga0105239_10115774 3300010375 Bacteria 2974
32 Ga0105239_10182479 3300010375 Bacteria 2348
33 Ga0157373_10002328 3300013100 Bacteria 14407
34 Ga0157371_10013018 3300013102 Bacteria 6333
35 Ga0157370_10000414 3300013104 Bacteria 53923
36 Ga0157370_10002253 3300013104 Bacteria 23432
37 Ga0157370_10026050 3300013104 Bacteria 5778
38 Ga0157370_10058506 3300013104 Bacteria 3663
39 Ga0157370_10083043 3300013104 Bacteria 3012
40 Ga0157369_10000362 3300013105 Bacteria 60506
41 Ga0157369_10009970 3300013105 Bacteria 10853
42 Ga0157369_10017553 3300013105 Bacteria 8042
43 Ga0157369_10115733 3300013105 Bacteria 2847
44 Ga0157374_10000102 3300013296 Bacteria 78555
45 Ga0157374_10000139 3300013296 Bacteria 65427
46 Ga0157374_10000146 3300013296 Bacteria 64549
47 Ga0157372_10004271 3300013307 Bacteria 15275
48 Ga0157372_10023465 3300013307 Bacteria 6687
49 Ga0182008_10143700 3300014497 Bacteria 1195
50 Ga0182006_1048264 3300015261 Bacteria 1647
51 Ga0209672_100071 3300025228 Bacteria 169941
52 Ga0209672_100374 3300025228 Bacteria 27534
53 Ga0209672_100486 3300025228 Bacteria 22082
54 Ga0209672_100576 3300025228 Bacteria 19498
55 Ga0209672_100817 3300025228 Bacteria 14658
56 Ga0209147_100173 3300025229 Bacteria 82900
57 Ga0209258_100207 3300025242 Bacteria 119062
58 Ga0209148_1000134 3300025254 Bacteria 169941
59 Ga0209148_1000598 3300025254 Bacteria 32567
60 Ga0209759_1002061 3300025256 Bacteria 9421
61 Ga0209759_1011312 3300025256 Bacteria 2544
62 Ga0209455_1000562 3300025272 Bacteria 24879
63 Ga0207713_1000064 3300025735 Bacteria 200324
64 Ga0207647_10000987 3300025904 Bacteria 22063
65 Ga0207647_10002153 3300025904 Bacteria 15056
66 Ga0207647_10013122 3300025904 Bacteria 5757
67 Ga0207647_10093184 3300025904 Bacteria 1795
68 Ga0207705_10034612 3300025909 Bacteria 3612
69 Ga0207654_10120892 3300025911 Bacteria 1644
70 Ga0207695_10011120 3300025913 Bacteria 10925
71 Ga0207695_10014662 3300025913 Bacteria 9270
72 Ga0207695_10048023 3300025913 Bacteria 4511
73 Ga0207671_10008756 3300025914 Bacteria 8525
74 Ga0207671_10012552 3300025914 Bacteria 6804
75 Ga0207671_10076620 3300025914 Bacteria 2503
76 Ga0207671_10083133 3300025914 Bacteria 2403
77 Ga0207657_10002768 3300025919 Bacteria 18875
78 Ga0207657_10010466 3300025919 Bacteria 9254
79 Ga0207657_10025064 3300025919 Bacteria 5509
80 Ga0207694_10151265 3300025924 Bacteria 1870
81 Ga0207667_10021737 3300025949 Bacteria 7108
82 Ga0207702_10106099 3300026078 Bacteria 2489
83 Ga0307412_10000011 3300031911 Bacteria 405842
84 Ga0395900_0000383 3300037418 Bacteria 63792
85 Ga0395900_0018938 3300037418 Bacteria 7021
86 Ga0395900_0024337 3300037418 Bacteria 6200
87 Ga0395898_0008275 3300037466 Bacteria 11001
88 Ga0395898_0009958 3300037466 Bacteria 9957
89 Ga0395898_0011239 3300037466 Bacteria 9316
90 Ga0395898_0011995 3300037466 Bacteria 8970
91 Ga0395898_0015755 3300037466 Bacteria 7747
92 Ga0395898_0051819 3300037466 Bacteria 4011
93 Ga0395898_0071814 3300037466 Bacteria 3344
94 Ga0395898_0074203 3300037466 Bacteria 3286
95 Ga0395901_0008041 3300038443 Bacteria 10652
96 Ga0395901_0016029 3300038443 Bacteria 7634
97 Ga0395901_0047312 3300038443 Bacteria 4466
98 Ga0395901_0078129 3300038443 Bacteria 3455
99 Ga0395901_0343940 3300038443 Bacteria 1540
100 Ga0395901_0388794 3300038443 Bacteria 1434
101 Ga0439448_0000027 3300042005 Bacteria 24032
102 Ga0439448_0000077 3300042005 Bacteria 17051
103 Ga0466969_0004448 3300044656 Bacteria 7455
104 Ga0466969_0051513 3300044656 Bacteria 2026
105 Ga0466965_0004515 3300044683 Bacteria 6198
106 Ga0466966_0000758 3300044684 Bacteria 20485
107 Ga0466966_0000844 3300044684 Bacteria 19509
108 Ga0466961_0000627 3300044693 Bacteria 22139
109 Ga0466963_0076303 3300044694 Bacteria 2263
110 Ga0466970_0074977 3300044765 Bacteria 1822
111 Ga0466960_0008207 3300044901 Bacteria 4270
112 Ga0466959_0016425 3300045049 Bacteria 5408
113 Ga0466959_0026565 3300045049 Bacteria 4290
114 Ga0466959_0039664 3300045049 Bacteria 3480
115 Ga0466959_0042706 3300045049 Bacteria 3344
116 Ga0466959_0102482 3300045049 Bacteria 2048
117 Ga0466959_0138361 3300045049 Bacteria 1722
118 Ga0466958_0032632 3300045836 Bacteria 3099
119 Ga0466958_0289474 3300045836 Unclassified 1050
120 Ga0466967_0477691 3300045976 Bacteria 1221
121 Ga0495651_0056501 3300046462 Bacteria 3015
122 Ga0495596_0054693 3300046500 Bacteria 1560
123 Ga0495606_0031923 3300046507 Bacteria 3656
124 Ga0495599_0000165 3300046678 Bacteria 43569
125 Ga0496104_0016594 3300048907 Bacteria 6692
126 Ga0496116_0006304 3300048919 Bacteria 10795
127 Ga0496117_0007017 3300048920 Bacteria 11159
128 Ga0496118_0008442 3300048921 Bacteria 10647
129 2808968405 2808606384 Bacteria 8474373
130 2809003236 2808606390 Bacteria 8476311
131 2809010513 2808606391 Bacteria 8308166
132 2817453632 2816332286 Bacteria 6853759
133 2863426312 2863421361 Bacteria 7300805
134 2904567874 2904564687 Bacteria 7609577
135 2904574724 2904571731 Bacteria 7608790
136 2928112743 2928108538 Bacteria 7360024
137 2928508401 2928503688 Bacteria 7268108
138 2928539184 2928536128 Bacteria 7657547
139 2981992993 2981990288 Bacteria 7590678
140 8018850774 8018845410 Bacteria 8933938
141 8020949219 8020945358 Bacteria 8467355
142 Ga0105238_10213987
143 JGI24736J21556_1001157
144 JGI24735J21928_10002923
145 JGI24735J21928_10004488
146 Ga0055532_1000744
147 Ga0055527_1000536
148 Ga0055527_1002911
149 Ga0055535_1000943
150 Ga0055542_1001407
151 Ga0055529_1000516
152 Ga0070658_10015243
153 Ga0070658_10044158
154 Ga0070658_10230844
155 Ga0070660_100009295
156 Ga0070660_100017125
157 Ga0070660_100046447
158 Ga0068855_100044195
159 Ga0068855_100083486
160 Ga0068856_100134063
161 Ga0068856_100154065
162 Ga0105251_10002396
163 Ga0105240_10008496
164 Ga0105240_10056989
165 Ga0105240_10110847
166 Ga0105240_10311545
167 Ga0105241_10019326
168 Ga0105237_10014346
169 Ga0105237_10041082
170 Ga0105237_10177532
171 Ga0105239_10006011
172 Ga0105239_10115774
173 Ga0105239_10182479
174 Ga0157373_10002328
175 Ga0157371_10013018
176 Ga0157370_10000414
177 Ga0157370_10002253
178 Ga0157370_10026050
179 Ga0157370_10058506
180 Ga0157370_10083043
181 Ga0157369_10000362
182 Ga0157369_10009970
183 Ga0157369_10017553
184 Ga0157369_10115733
185 Ga0157374_10000102
186 Ga0157374_10000139
187 Ga0157374_10000146
188 Ga0157372_10004271
189 Ga0157372_10023465
190 Ga0182008_10143700
191 Ga0182006_1048264
192 Ga0209672_100071
193 Ga0209672_100374
194 Ga0209672_100486
195 Ga0209672_100576
196 Ga0209672_100817
197 Ga0209147_100173
198 Ga0209258_100207
199 Ga0209148_1000134
200 Ga0209148_1000598
201 Ga0209759_1002061
202 Ga0209759_1011312
203 Ga0209455_1000562
204 Ga0207713_1000064
205 Ga0207647_10000987
206 Ga0207647_10002153
207 Ga0207647_10013122
208 Ga0207647_10093184
209 Ga0207705_10034612
210 Ga0207654_10120892
211 Ga0207695_10011120
212 Ga0207695_10014662
213 Ga0207695_10048023
214 Ga0207671_10008756
215 Ga0207671_10012552
216 Ga0207671_10076620
217 Ga0207671_10083133
218 Ga0207657_10002768
219 Ga0207657_10010466
220 Ga0207657_10025064
221 Ga0207694_10151265
222 Ga0207667_10021737
223 Ga0207702_10106099
224 Ga0307412_10000011
225 Ga0395900_0000383
226 Ga0395900_0018938
227 Ga0395900_0024337
228 Ga0395898_0008275
229 Ga0395898_0009958
230 Ga0395898_0011239
231 Ga0395898_0011995
232 Ga0395898_0015755
233 Ga0395898_0051819
234 Ga0395898_0071814
235 Ga0395898_0074203
236 Ga0395901_0008041
237 Ga0395901_0016029
238 Ga0395901_0047312
239 Ga0395901_0078129
240 Ga0395901_0343940
241 Ga0395901_0388794
242 Ga0439448_0000027
243 Ga0439448_0000077
244 Ga0466969_0004448
245 Ga0466969_0051513
246 Ga0466965_0004515
247 Ga0466966_0000758
248 Ga0466966_0000844
249 Ga0466961_0000627
250 Ga0466963_0076303
251 Ga0466970_0074977
252 Ga0466960_0008207
253 Ga0466959_0016425
254 Ga0466959_0026565
255 Ga0466959_0039664
256 Ga0466959_0042706
257 Ga0466959_0102482
258 Ga0466959_0138361
259 Ga0466958_0032632
260 Ga0466958_0289474
261 Ga0466967_0477691
262 Ga0495651_0056501
263 Ga0495596_0054693
264 Ga0495606_0031923
265 Ga0495599_0000165
266 Ga0496104_0016594
267 Ga0496116_0006304
268 Ga0496117_0007017
269 Ga0496118_0008442
270 2808968405
271 2809003236
272 2809010513
273 2817453632
274 2863426312
275 2904567874
276 2904574724
277 2928112743
278 2928508401
279 2928539184
280 2981992993
281 8018850774
282 8020949219

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20455

DUF6708

Family of unknown function (DUF6708)

101

296

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
2y3b-assembly1.cif.gz_A co-bound form of cupriavidus metallidurans ch34 cnrxs 0.7998 55 113
7jta-assembly1.cif.gz_A crystal structure of a putative nuclease with anti-cas9 activity from an uncultured clostridia bacterium 0.7645 157 200
6le2-assembly1.cif.gz_B structure of d-carbamoylase mutant from nitratireductor indicus 0.7377 160 193
6h2f-assembly1.cif.gz_J structure of the pre-pore ahlb of the tripartite alpha-pore forming toxin, ahl, from aeromonas hydrophila. 0.7347 60 115
8i7o-assembly1.cif.gz_C4 in situ structure of axonemal doublet microtubules in mouse sperm with 16-nm repeat 0.7302 55 115
ID Description Score Start End Superfamily
af_A0A0B4K6B2_1_102_1.20.58.90 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.8327 53 115 1.20.58.90
3m7gA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8108 53 115 1.10.8.1010
af_A0A078BPE5_147_314_1.20.120.30 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Aspartate receptor, ligand-binding domain 0.7922 54 116 1.20.120.30
af_Q54W19_24_269_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.7824 54 115 1.20.1560.10
af_A0A1D6FII0_204_293_1.10.287.10 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;S15/NS1, RNA-binding 0.7764 63 115 1.10.287.10
ID Description Score Start End GO Terms
AF-A0A2T3XXK0-F1-model_v4 DUF6708 domain-containing protein 0.9062 124 349 GO:0016020
AF-A0A7Y5Y7H6-F1-model_v4 DUF6708 domain-containing protein 0.8742 163 362
AF-A0A7Y5Y7H6-F1-model_v4 DUF6708 domain-containing protein 0.8619 163 362
AF-A0A2T3XXK0-F1-model_v4 DUF6708 domain-containing protein 0.8502 124 349 GO:0016020
AF-A0A6P2NRB8-F1-model_v4 DUF6708 domain-containing protein 0.8386 169 362 GO:0016020

Map