F275242
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 180 | 144 | 360 | 739 |
Family's Representative Sequence
| Representative Sequence | 3300005545|Ga0070695_100000544|Ga0070695_10000054414 |
| Length | 772 |
| Sequence | MVFRPIGGTKRGRRTPGHRLSRPASWANPRPMSKTVEPINLRDALEERYLAYALSTIMHRALPDVRDGLKPVHRRILYAMRELRLDPEGGYKKCAKIVGEVMGNYHPHGDQAIYDALVRLAQDFAVRYPLVDGQGNFGNVDGDNAAAMRYTESRLTNVAVLLLEGIDEDTVDFRPTYDGSNQEPAVLPANFPNLLANGTSGIAVGMATSVPPHNVEELCNALLHLIKHPNAHIEKLVEFVPGPDFPTGGVLVEPRDAILEAYKTGRGGFRLRARWQKEEGGRGTYQIVVTEVPYQVQKAKLVERIAELINDKKLPLLGDVRDESAETVRLVLEPKSRSIDPMLLMESMFRLTELEVRFSLNMNVLSAGQVPGVLSLRDVLRRWLEHRQVVLVRRSKFRLQKIEHRLEVLDGYLIAFLNIDEVIRIVRFEDDPKAKLIKRFKLSEVQADAVLNLRLRSLSKLEEVEIRAEHDKLSKERRGLKSLLKHEDEQWERITDEIKATRETYAKKTELGRRRTSFADAPSIEIDLEQAMIEKEPITVILSEKGWIRAMKGHLDDISKLEFKQGDALKRAVKASTTDRLLLLASNGKVFTLAADQLPGGRGHGEPVRLMVDLEENHDFVEIWMHEPGRKLLVGATSGHGFIVPEDEMVAMTRKGKQVMNVDPPAEACVVVPADGDLVASIGENRKMLIFPLEEVNEMTRGKGVILQRYKDGALSDLRVFKKADGLSWLDPAGRTFSLPMAELRDWLGLRAQSGRLAPKGFPRSNKFGPAF |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 2 | 3300001977 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 | Metagenome | Rhizosphere |
| 3 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 4 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 19 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 23 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 24 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 25 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 26 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 27 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 28 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 29 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 30 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 31 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 32 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 33 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 34 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 35 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 36 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 37 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 38 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 39 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 40 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 41 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 53 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 77 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 78 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 79 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 80 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 81 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 82 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 83 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 84 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 85 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 86 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 87 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 88 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 89 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 90 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 91 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046692 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 94 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 95 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 96 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 97 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 98 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 99 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 100 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 101 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 102 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 103 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 104 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 106 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 111 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 112 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 116 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 121 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 126 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 127 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 128 | 2511231221 | Azospirillum lipoferum 4B | Isolate | Rhizosphere |
| 129 | 2522572158 | Azospirillum halopraeferens DSM 3675 | Isolate | Unclassified |
| 130 | 2643221591 | Devosia sp. Root685 | Isolate | Unclassified |
| 131 | 2671180139 | Chelativorans sp. A52C2 | Isolate | Unclassified |
| 132 | 2738541281 | Methylobacterium sp. GV094 | Isolate | Unclassified |
| 133 | 2738543032 | Methylobacterium sp. GV104 | Isolate | Unclassified |
| 134 | 2829745981 | Methylorubrum rhodinum DSM 2163 | Isolate | Rhizosphere |
| 135 | 2841911363 | Bosea caraganae RCAM04685 | Isolate | Nodule |
| 136 | 2841917233 | Bosea caraganae RCAM04680 | Isolate | Nodule |
| 137 | 2854681122 | Luteovulum sphaeroides SCJ | Isolate | Unclassified |
| 138 | 2861691609 | Methylorubrum thiocyanatum DSM 11490 | Isolate | Rhizosphere |
| 139 | 2897803580 | Azospirillum doebereinerae GSF71 | Isolate | Unclassified |
| 140 | 2898795034 | Rhodobacter sp. SGA-6-6 | Isolate | Rhizosphere |
| 141 | 2919679072 | Pseudotabrizicola sp. 4114 | Isolate | Unclassified |
| 142 | 2929199973 | Roseomonas sp. R-73070 Hybrid assembly | Isolate | Unclassified |
| 143 | 8054002106 | Azospirillum lipoferum 59b | Isolate | Unclassified |
| 144 | 8055909800 | Plastoroseomonas hellenica LMG 31523 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.56 |
| Metatranscriptomes | 0 |
| Isolates | 9.44 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 5 |
| Nodule | 1.11 |
| Rhizoplane | 4.44 |
| Rhizosphere | 80 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070695_100000544 | 3300005545 | Bacteria | 19917 |
| 2 | JGI24746J21847_1001520 | 3300001977 | Bacteria | 3693 |
| 3 | JGI25165J46597_1003677 | 3300003214 | Bacteria | 3660 |
| 4 | Ga0070658_10019496 | 3300005327 | Bacteria | 5431 |
| 5 | Ga0070658_10033855 | 3300005327 | Bacteria | 4111 |
| 6 | Ga0070680_100079034 | 3300005336 | Bacteria | 2711 |
| 7 | Ga0070660_100018997 | 3300005339 | Bacteria | 5031 |
| 8 | Ga0070661_100030399 | 3300005344 | Bacteria | 3902 |
| 9 | Ga0070668_100000048 | 3300005347 | Bacteria | 75276 |
| 10 | Ga0070671_100014222 | 3300005355 | Bacteria | 6426 |
| 11 | Ga0070674_100041309 | 3300005356 | Bacteria | 3124 |
| 12 | Ga0070674_100050692 | 3300005356 | Bacteria | 2858 |
| 13 | Ga0070659_100018228 | 3300005366 | Bacteria | 5297 |
| 14 | Ga0070705_100000369 | 3300005440 | Bacteria | 26400 |
| 15 | Ga0070700_100004612 | 3300005441 | Bacteria | 7214 |
| 16 | Ga0070694_100000448 | 3300005444 | Bacteria | 22487 |
| 17 | Ga0070663_100037633 | 3300005455 | Bacteria | 3370 |
| 18 | Ga0070699_100000310 | 3300005518 | Bacteria | 47250 |
| 19 | Ga0070679_100056865 | 3300005530 | Bacteria | 3898 |
| 20 | Ga0068853_100037884 | 3300005539 | Bacteria | 4105 |
| 21 | Ga0068853_100046408 | 3300005539 | Bacteria | 3725 |
| 22 | Ga0070695_100009452 | 3300005545 | Bacteria | 5805 |
| 23 | Ga0070695_100012531 | 3300005545 | Bacteria | 5090 |
| 24 | Ga0070696_100009746 | 3300005546 | Bacteria | 6427 |
| 25 | Ga0070704_100001264 | 3300005549 | Bacteria | 13337 |
| 26 | Ga0068855_100035601 | 3300005563 | Bacteria | 5929 |
| 27 | Ga0068855_100066488 | 3300005563 | Bacteria | 4203 |
| 28 | Ga0068855_100141866 | 3300005563 | Bacteria | 2737 |
| 29 | Ga0068857_100004766 | 3300005577 | Bacteria | 11486 |
| 30 | Ga0068857_100036727 | 3300005577 | Bacteria | 4340 |
| 31 | Ga0068854_100038960 | 3300005578 | Bacteria | 3345 |
| 32 | Ga0068852_100016779 | 3300005616 | Bacteria | 5723 |
| 33 | Ga0068852_100043232 | 3300005616 | Bacteria | 3820 |
| 34 | Ga0068859_100014618 | 3300005617 | Bacteria | 7884 |
| 35 | Ga0068864_100028403 | 3300005618 | Bacteria | 4727 |
| 36 | Ga0068861_100000179 | 3300005719 | Bacteria | 33782 |
| 37 | Ga0068863_100000017 | 3300005841 | Bacteria | 207950 |
| 38 | Ga0068860_100007617 | 3300005843 | Bacteria | 10834 |
| 39 | Ga0068862_100007422 | 3300005844 | Bacteria | 9091 |
| 40 | Ga0068862_100093385 | 3300005844 | Bacteria | 2624 |
| 41 | Ga0068862_100101793 | 3300005844 | Bacteria | 2513 |
| 42 | Ga0081455_10011765 | 3300005937 | Bacteria | 8764 |
| 43 | Ga0081540_1000707 | 3300005983 | Bacteria | 30969 |
| 44 | Ga0081539_10000626 | 3300005985 | Bacteria | 71615 |
| 45 | Ga0075365_10006195 | 3300006038 | Bacteria | 6556 |
| 46 | Ga0075368_10000616 | 3300006042 | Bacteria | 10751 |
| 47 | Ga0075362_10010422 | 3300006177 | Bacteria | 3629 |
| 48 | Ga0075428_100013378 | 3300006844 | Bacteria | 9128 |
| 49 | Ga0075431_100030179 | 3300006847 | Bacteria | 5584 |
| 50 | Ga0075433_10034902 | 3300006852 | Bacteria | 4322 |
| 51 | Ga0075434_100014403 | 3300006871 | Bacteria | 7558 |
| 52 | Ga0075434_100076897 | 3300006871 | Bacteria | 3332 |
| 53 | Ga0097620_100014618 | 3300006931 | Bacteria | 7884 |
| 54 | Ga0105240_10020800 | 3300009093 | Bacteria | 8739 |
| 55 | Ga0105240_10048678 | 3300009093 | Bacteria | 5355 |
| 56 | Ga0111539_10004144 | 3300009094 | Bacteria | 19016 |
| 57 | Ga0111539_10153058 | 3300009094 | Bacteria | 2699 |
| 58 | Ga0105247_10023084 | 3300009101 | Bacteria | 3746 |
| 59 | Ga0114129_10051416 | 3300009147 | Bacteria | 5785 |
| 60 | Ga0114129_10219792 | 3300009147 | Bacteria | 2564 |
| 61 | Ga0105237_10000542 | 3300009545 | Bacteria | 53188 |
| 62 | Ga0105249_10068008 | 3300009553 | Bacteria | 3284 |
| 63 | Ga0105239_10098262 | 3300010375 | Bacteria | 3236 |
| 64 | Ga0105246_10044266 | 3300011119 | Bacteria | 3024 |
| 65 | Ga0157371_10010578 | 3300013102 | Bacteria | 7169 |
| 66 | Ga0157369_10042411 | 3300013105 | Bacteria | 4964 |
| 67 | Ga0213876_10000538 | 3300021384 | Bacteria | 28558 |
| 68 | Ga0207427_104216 | 3300025231 | Bacteria | 2532 |
| 69 | Ga0209233_1000811 | 3300025261 | Bacteria | 13925 |
| 70 | Ga0207653_10006016 | 3300025885 | Bacteria | 3783 |
| 71 | Ga0207705_10006899 | 3300025909 | Bacteria | 8391 |
| 72 | Ga0207707_10021466 | 3300025912 | Bacteria | 5645 |
| 73 | Ga0207695_10006605 | 3300025913 | Bacteria | 14987 |
| 74 | Ga0207695_10034758 | 3300025913 | Bacteria | 5476 |
| 75 | Ga0207695_10056339 | 3300025913 | Bacteria | 4091 |
| 76 | Ga0207671_10000649 | 3300025914 | Bacteria | 45408 |
| 77 | Ga0207657_10000880 | 3300025919 | Bacteria | 31754 |
| 78 | Ga0207664_10074498 | 3300025929 | Bacteria | 2743 |
| 79 | Ga0207644_10000010 | 3300025931 | Bacteria | 226989 |
| 80 | Ga0207667_10004813 | 3300025949 | Bacteria | 16512 |
| 81 | Ga0207667_10010371 | 3300025949 | Bacteria | 10889 |
| 82 | Ga0207667_10013707 | 3300025949 | Bacteria | 9264 |
| 83 | Ga0207668_10000075 | 3300025972 | Bacteria | 75329 |
| 84 | Ga0207658_10046159 | 3300025986 | Bacteria | 3180 |
| 85 | Ga0207639_10033291 | 3300026041 | Bacteria | 3801 |
| 86 | Ga0207708_10009024 | 3300026075 | Bacteria | 7379 |
| 87 | Ga0207708_10024930 | 3300026075 | Bacteria | 4525 |
| 88 | Ga0207702_10081547 | 3300026078 | Bacteria | 2809 |
| 89 | Ga0207641_10000036 | 3300026088 | Bacteria | 213165 |
| 90 | Ga0207648_10056010 | 3300026089 | Bacteria | 3442 |
| 91 | Ga0207676_10008988 | 3300026095 | Bacteria | 7108 |
| 92 | Ga0207674_10011683 | 3300026116 | Bacteria | 9858 |
| 93 | Ga0207674_10030752 | 3300026116 | Bacteria | 5643 |
| 94 | Ga0207675_100050348 | 3300026118 | Bacteria | 3887 |
| 95 | Ga0268266_10000442 | 3300028379 | Bacteria | 61975 |
| 96 | Ga0268266_10017438 | 3300028379 | Bacteria | 6124 |
| 97 | Ga0268266_10028524 | 3300028379 | Bacteria | 4743 |
| 98 | Ga0268264_10007660 | 3300028381 | Bacteria | 9000 |
| 99 | Ga0265318_10003649 | 3300028577 | Bacteria | 7685 |
| 100 | Ga0265332_10015627 | 3300031238 | Bacteria | 3351 |
| 101 | Ga0265331_10017579 | 3300031250 | Bacteria | 3724 |
| 102 | Ga0265327_10032252 | 3300031251 | Bacteria | 2934 |
| 103 | Ga0316579_10003543 | 3300031691 | Bacteria | 6108 |
| 104 | Ga0265314_10007515 | 3300031711 | Bacteria | 9444 |
| 105 | Ga0265314_10020670 | 3300031711 | Bacteria | 5080 |
| 106 | Ga0316576_10056370 | 3300031727 | Bacteria | 2870 |
| 107 | Ga0316574_0010705 | 3300035398 | Bacteria | 5193 |
| 108 | Ga0373931_0008062 | 3300035691 | Bacteria | 4984 |
| 109 | Ga0395899_0051669 | 3300037312 | Bacteria | 3049 |
| 110 | Ga0395899_0063320 | 3300037312 | Bacteria | 2721 |
| 111 | Ga0395900_0054487 | 3300037418 | Bacteria | 4118 |
| 112 | Ga0395898_0012496 | 3300037466 | Bacteria | 8780 |
| 113 | Ga0395905_0079092 | 3300037471 | Bacteria | 3082 |
| 114 | Ga0436365_0769465 | 3300039437 | Bacteria | 36515 |
| 115 | Ga0436363_0463011 | 3300039450 | Bacteria | 17896 |
| 116 | Ga0495668_0009628 | 3300046616 | Bacteria | 5913 |
| 117 | Ga0495671_0002122 | 3300046692 | Bacteria | 12669 |
| 118 | Ga0496102_0038909 | 3300048905 | Bacteria | 4295 |
| 119 | Ga0496103_0020728 | 3300048906 | Bacteria | 3952 |
| 120 | Ga0496104_0000182 | 3300048907 | Bacteria | 56117 |
| 121 | Ga0496108_0001152 | 3300048911 | Bacteria | 20646 |
| 122 | Ga0496109_0012939 | 3300048912 | Bacteria | 7214 |
| 123 | Ga0496110_0004193 | 3300048913 | Bacteria | 11138 |
| 124 | Ga0496110_0011445 | 3300048913 | Bacteria | 7261 |
| 125 | Ga0496112_0016459 | 3300048915 | Bacteria | 6929 |
| 126 | Ga0496122_0000176 | 3300048925 | Bacteria | 152190 |
| 127 | Ga0496123_0000291 | 3300048926 | Bacteria | 97989 |
| 128 | Ga0496125_0002605 | 3300048928 | Bacteria | 23158 |
| 129 | Ga0501037_0041449 | 3300049573 | Bacteria | 3386 |
| 130 | Ga0501037_0044769 | 3300049573 | Bacteria | 3249 |
| 131 | Ga0501038_0000374 | 3300049574 | Bacteria | 38571 |
| 132 | Ga0501039_0018801 | 3300049575 | Bacteria | 5303 |
| 133 | Ga0501043_0069282 | 3300049579 | Bacteria | 2770 |
| 134 | Ga0501046_0000319 | 3300049580 | Bacteria | 48364 |
| 135 | Ga0501046_0005376 | 3300049580 | Bacteria | 11448 |
| 136 | Ga0501047_0015156 | 3300049581 | Bacteria | 7339 |
| 137 | Ga0501048_0029459 | 3300049582 | Bacteria | 3982 |
| 138 | Ga0501069_0009209 | 3300049585 | Bacteria | 5208 |
| 139 | Ga0501070_0000413 | 3300049586 | Bacteria | 38928 |
| 140 | Ga0501070_0012588 | 3300049586 | Bacteria | 7137 |
| 141 | Ga0501070_0072756 | 3300049586 | Bacteria | 2845 |
| 142 | Ga0501070_0087737 | 3300049586 | Bacteria | 2575 |
| 143 | Ga0501074_0037743 | 3300049590 | Bacteria | 3501 |
| 144 | Ga0501076_0003666 | 3300049592 | Bacteria | 10797 |
| 145 | Ga0501077_0015638 | 3300049593 | Bacteria | 4779 |
| 146 | Ga0501257_000127 | 3300049686 | Bacteria | 17543 |
| 147 | Ga0501079_0002930 | 3300049741 | Bacteria | 12466 |
| 148 | Ga0501080_0002598 | 3300049742 | Bacteria | 15820 |
| 149 | Ga0501044_0012824 | 3300049823 | Bacteria | 9076 |
| 150 | Ga0501044_0042604 | 3300049823 | Bacteria | 4720 |
| 151 | Ga0501045_0112322 | 3300049824 | Bacteria | 2020 |
| 152 | nmdc:mga06z11_5968_c1 | 3300050494 | Bacteria | 4922 |
| 153 | nmdc:mga0qj67_1810_c1 | 3300050509 | Bacteria | 15115 |
| 154 | nmdc:mga0qj67_41148_c1 | 3300050509 | Bacteria | 3634 |
| 155 | nmdc:mga06r32_12011_c1 | 3300050510 | Bacteria | 7805 |
| 156 | nmdc:mga06r32_1207_c1 | 3300050510 | Bacteria | 23278 |
| 157 | nmdc:mga08y16_14389_c1 | 3300050511 | Bacteria | 8326 |
| 158 | nmdc:mga08y16_18295_c1 | 3300050511 | Bacteria | 7383 |
| 159 | nmdc:mga0a205_10587_c1 | 3300050515 | Bacteria | 8475 |
| 160 | Ga0500643_000513 | 3300053087 | Bacteria | 27509 |
| 161 | Ga0500643_000937 | 3300053087 | Bacteria | 18234 |
| 162 | Ga0501082_0015385 | 3300060353 | Bacteria | 6584 |
| 163 | Ga0530510_0057744 | 3300061734 | Bacteria | 2805 |
| 164 | 2512033555 | 2511231221 | Bacteria | 6846400 |
| 165 | 2523102358 | 2522572158 | Bacteria | 6514390 |
| 166 | 2643963956 | 2643221591 | Bacteria | 4397626 |
| 167 | 2671692587 | 2671180139 | Bacteria | 4196045 |
| 168 | 2738744541 | 2738541281 | Bacteria | 5112672 |
| 169 | 2739353771 | 2738543032 | Bacteria | 5115625 |
| 170 | 2829748914 | 2829745981 | Bacteria | 5406054 |
| 171 | 2841916216 | 2841911363 | Bacteria | 6173697 |
| 172 | 2841921115 | 2841917233 | Bacteria | 6173500 |
| 173 | 2854685299 | 2854681122 | Bacteria | 4548679 |
| 174 | 2861694969 | 2861691609 | Bacteria | 5628931 |
| 175 | 2897805642 | 2897803580 | Bacteria | 7000062 |
| 176 | 2898797049 | 2898795034 | Bacteria | 4294459 |
| 177 | 2919679343 | 2919679072 | Bacteria | 4629602 |
| 178 | 2929202633 | 2929199973 | Bacteria | 7260745 |
| 179 | 8054004796 | 8054002106 | Bacteria | 7987183 |
| 180 | 8055910205 | 8055909800 | Bacteria | 7278581 |
| 181 | Ga0070695_100000544 | |||
| 182 | JGI24746J21847_1001520 | |||
| 183 | JGI25165J46597_1003677 | |||
| 184 | Ga0070658_10019496 | |||
| 185 | Ga0070658_10033855 | |||
| 186 | Ga0070680_100079034 | |||
| 187 | Ga0070660_100018997 | |||
| 188 | Ga0070661_100030399 | |||
| 189 | Ga0070668_100000048 | |||
| 190 | Ga0070671_100014222 | |||
| 191 | Ga0070674_100041309 | |||
| 192 | Ga0070674_100050692 | |||
| 193 | Ga0070659_100018228 | |||
| 194 | Ga0070705_100000369 | |||
| 195 | Ga0070700_100004612 | |||
| 196 | Ga0070694_100000448 | |||
| 197 | Ga0070663_100037633 | |||
| 198 | Ga0070699_100000310 | |||
| 199 | Ga0070679_100056865 | |||
| 200 | Ga0068853_100037884 | |||
| 201 | Ga0068853_100046408 | |||
| 202 | Ga0070695_100009452 | |||
| 203 | Ga0070695_100012531 | |||
| 204 | Ga0070696_100009746 | |||
| 205 | Ga0070704_100001264 | |||
| 206 | Ga0068855_100035601 | |||
| 207 | Ga0068855_100066488 | |||
| 208 | Ga0068855_100141866 | |||
| 209 | Ga0068857_100004766 | |||
| 210 | Ga0068857_100036727 | |||
| 211 | Ga0068854_100038960 | |||
| 212 | Ga0068852_100016779 | |||
| 213 | Ga0068852_100043232 | |||
| 214 | Ga0068859_100014618 | |||
| 215 | Ga0068864_100028403 | |||
| 216 | Ga0068861_100000179 | |||
| 217 | Ga0068863_100000017 | |||
| 218 | Ga0068860_100007617 | |||
| 219 | Ga0068862_100007422 | |||
| 220 | Ga0068862_100093385 | |||
| 221 | Ga0068862_100101793 | |||
| 222 | Ga0081455_10011765 | |||
| 223 | Ga0081540_1000707 | |||
| 224 | Ga0081539_10000626 | |||
| 225 | Ga0075365_10006195 | |||
| 226 | Ga0075368_10000616 | |||
| 227 | Ga0075362_10010422 | |||
| 228 | Ga0075428_100013378 | |||
| 229 | Ga0075431_100030179 | |||
| 230 | Ga0075433_10034902 | |||
| 231 | Ga0075434_100014403 | |||
| 232 | Ga0075434_100076897 | |||
| 233 | Ga0097620_100014618 | |||
| 234 | Ga0105240_10020800 | |||
| 235 | Ga0105240_10048678 | |||
| 236 | Ga0111539_10004144 | |||
| 237 | Ga0111539_10153058 | |||
| 238 | Ga0105247_10023084 | |||
| 239 | Ga0114129_10051416 | |||
| 240 | Ga0114129_10219792 | |||
| 241 | Ga0105237_10000542 | |||
| 242 | Ga0105249_10068008 | |||
| 243 | Ga0105239_10098262 | |||
| 244 | Ga0105246_10044266 | |||
| 245 | Ga0157371_10010578 | |||
| 246 | Ga0157369_10042411 | |||
| 247 | Ga0213876_10000538 | |||
| 248 | Ga0207427_104216 | |||
| 249 | Ga0209233_1000811 | |||
| 250 | Ga0207653_10006016 | |||
| 251 | Ga0207705_10006899 | |||
| 252 | Ga0207707_10021466 | |||
| 253 | Ga0207695_10006605 | |||
| 254 | Ga0207695_10034758 | |||
| 255 | Ga0207695_10056339 | |||
| 256 | Ga0207671_10000649 | |||
| 257 | Ga0207657_10000880 | |||
| 258 | Ga0207664_10074498 | |||
| 259 | Ga0207644_10000010 | |||
| 260 | Ga0207667_10004813 | |||
| 261 | Ga0207667_10010371 | |||
| 262 | Ga0207667_10013707 | |||
| 263 | Ga0207668_10000075 | |||
| 264 | Ga0207658_10046159 | |||
| 265 | Ga0207639_10033291 | |||
| 266 | Ga0207708_10009024 | |||
| 267 | Ga0207708_10024930 | |||
| 268 | Ga0207702_10081547 | |||
| 269 | Ga0207641_10000036 | |||
| 270 | Ga0207648_10056010 | |||
| 271 | Ga0207676_10008988 | |||
| 272 | Ga0207674_10011683 | |||
| 273 | Ga0207674_10030752 | |||
| 274 | Ga0207675_100050348 | |||
| 275 | Ga0268266_10000442 | |||
| 276 | Ga0268266_10017438 | |||
| 277 | Ga0268266_10028524 | |||
| 278 | Ga0268264_10007660 | |||
| 279 | Ga0265318_10003649 | |||
| 280 | Ga0265332_10015627 | |||
| 281 | Ga0265331_10017579 | |||
| 282 | Ga0265327_10032252 | |||
| 283 | Ga0316579_10003543 | |||
| 284 | Ga0265314_10007515 | |||
| 285 | Ga0265314_10020670 | |||
| 286 | Ga0316576_10056370 | |||
| 287 | Ga0316574_0010705 | |||
| 288 | Ga0373931_0008062 | |||
| 289 | Ga0395899_0051669 | |||
| 290 | Ga0395899_0063320 | |||
| 291 | Ga0395900_0054487 | |||
| 292 | Ga0395898_0012496 | |||
| 293 | Ga0395905_0079092 | |||
| 294 | Ga0436365_0769465 | |||
| 295 | Ga0436363_0463011 | |||
| 296 | Ga0495668_0009628 | |||
| 297 | Ga0495671_0002122 | |||
| 298 | Ga0496102_0038909 | |||
| 299 | Ga0496103_0020728 | |||
| 300 | Ga0496104_0000182 | |||
| 301 | Ga0496108_0001152 | |||
| 302 | Ga0496109_0012939 | |||
| 303 | Ga0496110_0004193 | |||
| 304 | Ga0496110_0011445 | |||
| 305 | Ga0496112_0016459 | |||
| 306 | Ga0496122_0000176 | |||
| 307 | Ga0496123_0000291 | |||
| 308 | Ga0496125_0002605 | |||
| 309 | Ga0501037_0041449 | |||
| 310 | Ga0501037_0044769 | |||
| 311 | Ga0501038_0000374 | |||
| 312 | Ga0501039_0018801 | |||
| 313 | Ga0501043_0069282 | |||
| 314 | Ga0501046_0000319 | |||
| 315 | Ga0501046_0005376 | |||
| 316 | Ga0501047_0015156 | |||
| 317 | Ga0501048_0029459 | |||
| 318 | Ga0501069_0009209 | |||
| 319 | Ga0501070_0000413 | |||
| 320 | Ga0501070_0012588 | |||
| 321 | Ga0501070_0072756 | |||
| 322 | Ga0501070_0087737 | |||
| 323 | Ga0501074_0037743 | |||
| 324 | Ga0501076_0003666 | |||
| 325 | Ga0501077_0015638 | |||
| 326 | Ga0501257_000127 | |||
| 327 | Ga0501079_0002930 | |||
| 328 | Ga0501080_0002598 | |||
| 329 | Ga0501044_0012824 | |||
| 330 | Ga0501044_0042604 | |||
| 331 | Ga0501045_0112322 | |||
| 332 | nmdc:mga06z11_5968_c1 | |||
| 333 | nmdc:mga0qj67_1810_c1 | |||
| 334 | nmdc:mga0qj67_41148_c1 | |||
| 335 | nmdc:mga06r32_12011_c1 | |||
| 336 | nmdc:mga06r32_1207_c1 | |||
| 337 | nmdc:mga08y16_14389_c1 | |||
| 338 | nmdc:mga08y16_18295_c1 | |||
| 339 | nmdc:mga0a205_10587_c1 | |||
| 340 | Ga0500643_000513 | |||
| 341 | Ga0500643_000937 | |||
| 342 | Ga0501082_0015385 | |||
| 343 | Ga0530510_0057744 | |||
| 344 | 2512033555 | |||
| 345 | 2523102358 | |||
| 346 | 2643963956 | |||
| 347 | 2671692587 | |||
| 348 | 2738744541 | |||
| 349 | 2739353771 | |||
| 350 | 2829748914 | |||
| 351 | 2841916216 | |||
| 352 | 2841921115 | |||
| 353 | 2854685299 | |||
| 354 | 2861694969 | |||
| 355 | 2897805642 | |||
| 356 | 2898797049 | |||
| 357 | 2919679343 | |||
| 358 | 2929202633 | |||
| 359 | 8054004796 | |||
| 360 | 8055910205 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4ddq-assembly3.cif.gz_F | structural plasticity of the bacillus subtilis gyra homodimer | 0.917 | 39 | 497 |
| 2inr-assembly1.cif.gz_A-2 | crystal structure of a 59 kda fragment of topoisomerase iv subunit a (grla) from staphylococcus aureus | 0.9165 | 39 | 502 |
| 2inr-assembly1.cif.gz_A-2 | crystal structure of a 59 kda fragment of topoisomerase iv subunit a (grla) from staphylococcus aureus | 0.9145 | 39 | 502 |
| 4ddq-assembly3.cif.gz_F | structural plasticity of the bacillus subtilis gyra homodimer | 0.9131 | 39 | 497 |
| 6bq9-assembly1.cif.gz_A-2 | 2.55 angstrom resolution crystal structure of n-terminal fragment (residues 1-493) of dna topoisomerase iv subunit a from pseudomonas putida | 0.909 | 38 | 496 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2xcqA04 | Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 | 0.9512 | 378 | 462 | 1.10.268.10 |
| 2xcoA04 | Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 | 0.9505 | 378 | 462 | 1.10.268.10 |
| 4z3oB04 | Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 | 0.9497 | 378 | 461 | 1.10.268.10 |
| 2xcrU04 | Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 | 0.9465 | 378 | 462 | 1.10.268.10 |
| 4z3oA04 | Mainly Alpha;Orthogonal Bundle;Topoisomerase; domain 3;Topoisomerase, domain 3 | 0.942 | 378 | 461 | 1.10.268.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6N7FH94-F1-model_v4 | DNA topoisomerase IV subunit A | 0.9851 | 212 | 378 |
GO:0003677
GO:0005524 GO:0005737 GO:0006265 GO:0009330 GO:0034335 |
| AF-A0A4Q3KDC6-F1-model_v4 | deleted | 0.9764 | 215 | 505 |
|
| AF-A0A529NIJ0-F1-model_v4 | DNA topoisomerase IV subunit A | 0.9735 | 554 | 722 |
GO:0003677
GO:0003916 GO:0005524 GO:0006265 |
| AF-A0A850NX30-F1-model_v4 | DNA topoisomerase IV subunit A | 0.9714 | 208 | 484 |
GO:0003677
GO:0003918 GO:0005524 GO:0005737 GO:0006265 GO:0009330 |
| AF-A0A353LP26-F1-model_v4 | DNA topoisomerase IV subunit A | 0.9714 | 653 | 748 |
GO:0016853
|