F275211

General Info

Members Datasets Scaffolds Average Seq Length
180 126 360 805

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100029883|Ga0070698_1000298833
Length 854
Sequence MCAIARVSTGLNETFDYVPEAHAPGFTLSPASQAVSQRGKSTREAPMLKRLTVFIAFVTAISYSAIPSQTQPRDYPVKPVPFTSVHFNDTFWAPRLEINRKTTIPFAFKKDEETKRIYHFERAAAVLRGETLTDKKPPGYPFDDTDVYKVLEGAAYALNVQRDPQLENYVDALIEKIAAAQEPDGYLYTTRTIDPQKPHPWAGTKRWELEKVDSHELYNLGHLYEAAVAYYQATGKRKLLDVALKSANLLDQTFGPGKQSIWPGHQITEMGLAKLYRATGDVRYLNLAKFLLDVRGPDGSRGAGRKYNQSHLKVVEQTEAVGHAVRATYMYSGMADVAALTGDLSYVNAIDKIWGDVAEKKLYITGGIGATGSGEAFGAAYELPNMSAYNETCAAVGNDFWNERLFLLHADAKYIDVMERTLYNGLISGVSLDGQSFFYPNPLESAGQHRRSPWFGVACCPGNITRFLPSLPGYVYAQQRDSLYVNLFVGSTATIKMDNGRQVKVLQDTRYPWDGIVKMTVTPDRVSNLNINVRIPGWARNEPIPSSLYRFADKNDEPVTLKVNGKPVQFAIEKGYATLKRKWKRGDVIELNLPMPVRRIQANELVVADRGRVALQRGPIVYAAEWPDNPGGRVRNLVLANDNKLDAEFRSDLLNGVVVVKGNAAALSYNEQGAVERKEQAFTAIPYYAWANRGPGEMAVWIANDPASARPLPWPTVASTSKVTTSGGQNPRAINDQNEPQSSRDPSSSYFHWWPKKGTVEWVEYAFAKESTVSEVELYWFDDTGRGECRVPKSWKLFYKDGSDWKPVETAASFGVEKDRYNNVSFKPVVTTALRLEVTLQPEWSAGIQEWKAK

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
78 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
82 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
85 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
92 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
93 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
96 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
97 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
102 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
105 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
106 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
117 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
122 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
123 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
124 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
125 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
126 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.78
Nodule 0
Rhizoplane 2.22
Rhizosphere 89.44
Stem 0
Stem Tuber 0
Unclassified 3.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100029883 3300005471 Bacteria 5654
2 Ga0065712_10000547 3300005290 Bacteria 10301
3 Ga0070683_100000006 3300005329 Bacteria 361071
4 Ga0070690_100028598 3300005330 Bacteria 3453
5 Ga0070680_100000115 3300005336 Bacteria 46887
6 Ga0070680_100074588 3300005336 Unclassified 2792
7 Ga0070669_100013403 3300005353 Bacteria 5830
8 Ga0070675_100004246 3300005354 Bacteria 10905
9 Ga0070674_100019759 3300005356 Bacteria 4286
10 Ga0070688_100000995 3300005365 Bacteria 14215
11 Ga0070694_100011434 3300005444 Bacteria 5497
12 Ga0070663_100017670 3300005455 Unclassified 4659
13 Ga0070681_10000336 3300005458 Bacteria 38138
14 Ga0070685_10008185 3300005466 Bacteria 5361
15 Ga0070706_100082191 3300005467 Bacteria 2984
16 Ga0070707_100029466 3300005468 Bacteria 5226
17 Ga0070698_100015461 3300005471 Bacteria 8063
18 Ga0070699_100041997 3300005518 Bacteria 3956
19 Ga0070699_100078125 3300005518 Bacteria 2882
20 Ga0070679_100000256 3300005530 Bacteria 44524
21 Ga0070684_100000018 3300005535 Bacteria 136597
22 Ga0070697_100005096 3300005536 Bacteria 10093
23 Ga0070696_100056967 3300005546 Bacteria 2727
24 Ga0070704_100011954 3300005549 Bacteria 5348
25 Ga0070704_100039780 3300005549 Bacteria 3230
26 Ga0068857_100010541 3300005577 Bacteria 8035
27 Ga0068856_100027846 3300005614 Bacteria 5513
28 Ga0068864_100013538 3300005618 Bacteria 6763
29 Ga0068863_100017867 3300005841 Bacteria 6786
30 Ga0068860_100028710 3300005843 Bacteria 5355
31 Ga0068862_100038446 3300005844 Bacteria 4058
32 Ga0081455_10006632 3300005937 Bacteria 12377
33 Ga0081455_10007021 3300005937 Bacteria 11960
34 Ga0081539_10008975 3300005985 Bacteria 8507
35 Ga0075428_100011640 3300006844 Bacteria 9788
36 Ga0075428_100057023 3300006844 Bacteria 4277
37 Ga0075428_100127795 3300006844 Bacteria 2765
38 Ga0075430_100009576 3300006846 Bacteria 8187
39 Ga0075431_100002684 3300006847 Bacteria 17243
40 Ga0075431_100083325 3300006847 Bacteria 3301
41 Ga0075434_100033372 3300006871 Bacteria 5080
42 Ga0075434_100037967 3300006871 Bacteria 4769
43 Ga0075429_100031344 3300006880 Bacteria 4620
44 Ga0105240_10000006 3300009093 Bacteria 669662
45 Ga0105240_10008541 3300009093 Bacteria 14636
46 Ga0105240_10008593 3300009093 Bacteria 14595
47 Ga0105240_10008623 3300009093 Bacteria 14565
48 Ga0111539_10001354 3300009094 Bacteria 32628
49 Ga0111539_10003903 3300009094 Bacteria 19610
50 Ga0111539_10016874 3300009094 Bacteria 9043
51 Ga0111539_10023128 3300009094 Bacteria 7633
52 Ga0111539_10059040 3300009094 Bacteria 4550
53 Ga0105247_10035240 3300009101 Bacteria 3050
54 Ga0114129_10003600 3300009147 Bacteria 21781
55 Ga0114129_10007589 3300009147 Bacteria 15441
56 Ga0114129_10024154 3300009147 Bacteria 8614
57 Ga0114129_10026834 3300009147 Bacteria 8154
58 Ga0114129_10046616 3300009147 Bacteria 6090
59 Ga0114129_10081777 3300009147 Bacteria 4490
60 Ga0105243_10004290 3300009148 Bacteria 11290
61 Ga0105242_10008739 3300009176 Bacteria 7772
62 Ga0105242_10025802 3300009176 Bacteria 4654
63 Ga0105242_10063743 3300009176 Bacteria 3035
64 Ga0105248_10010205 3300009177 Bacteria 10344
65 Ga0105248_10037728 3300009177 Bacteria 5407
66 Ga0105248_10047099 3300009177 Bacteria 4834
67 Ga0105237_10072590 3300009545 Unclassified 3435
68 Ga0105249_10103198 3300009553 Bacteria 2685
69 Ga0105239_10020457 3300010375 Bacteria 7299
70 Ga0157378_10052983 3300013297 Bacteria 3611
71 Ga0163162_10042763 3300013306 Bacteria 4536
72 Ga0157375_10040220 3300013308 Bacteria 4505
73 Ga0163163_10010906 3300014325 Bacteria 8207
74 Ga0157380_10006604 3300014326 Bacteria 8181
75 Ga0157377_10009379 3300014745 Bacteria 4799
76 Ga0157376_10092869 3300014969 Bacteria 2618
77 Ga0213876_10023078 3300021384 Unclassified 3287
78 Ga0213875_10000084 3300021388 Bacteria 109683
79 Ga0207707_10000190 3300025912 Bacteria 64802
80 Ga0207695_10000017 3300025913 Bacteria 769384
81 Ga0207695_10000988 3300025913 Bacteria 50418
82 Ga0207660_10000117 3300025917 Bacteria 46029
83 Ga0207662_10009492 3300025918 Bacteria 5356
84 Ga0207652_10000028 3300025921 Bacteria 150429
85 Ga0207646_10001984 3300025922 Bacteria 24577
86 Ga0207681_10029897 3300025923 Bacteria 3546
87 Ga0207669_10010534 3300025937 Bacteria 4455
88 Ga0207704_10053834 3300025938 Bacteria 2449
89 Ga0207691_10029201 3300025940 Bacteria 5158
90 Ga0207661_10000011 3300025944 Bacteria 361200
91 Ga0207712_10013303 3300025961 Bacteria 5275
92 Ga0207639_10050816 3300026041 Bacteria 3150
93 Ga0207678_10006508 3300026067 Bacteria 10370
94 Ga0207708_10045337 3300026075 Bacteria 3351
95 Ga0207702_10054786 3300026078 Unclassified 3380
96 Ga0207641_10015335 3300026088 Bacteria 6280
97 Ga0207648_10002171 3300026089 Bacteria 21320
98 Ga0207648_10007460 3300026089 Bacteria 10750
99 Ga0207674_10030033 3300026116 Bacteria 5718
100 Ga0207675_100040368 3300026118 Bacteria 4358
101 Ga0207428_10000595 3300027907 Bacteria 42731
102 Ga0207428_10004673 3300027907 Bacteria 12977
103 Ga0207428_10033041 3300027907 Bacteria 4251
104 Ga0268264_10013732 3300028381 Bacteria 6666
105 Ga0307515_10000005 3300028794 Bacteria 758563
106 Ga0265320_10002239 3300031240 Bacteria 13579
107 Ga0265320_10008267 3300031240 Bacteria 6379
108 Ga0265331_10009221 3300031250 Bacteria 5561
109 Ga0265316_10010976 3300031344 Bacteria 8218
110 Ga0307416_100066188 3300032002 Unclassified 2974
111 Ga0373927_0003912 3300035695 Bacteria 10559
112 Ga0373947_0018025 3300035725 Bacteria 4063
113 Ga0395905_0000018 3300037471 Bacteria 369321
114 Ga0436364_0880534 3300037853 Bacteria 127762
115 Ga0436364_0950392 3300037853 Bacteria 2791
116 Ga0436364_0962262 3300037853 Bacteria 3738
117 Ga0436364_1042639 3300037853 Bacteria 51100
118 Ga0436364_1109573 3300037853 Bacteria 5732
119 Ga0400490_14507 3300038726 Bacteria 7605
120 Ga0436365_0104260 3300039437 Bacteria 4094
121 Ga0451577_0000475 3300042876 Bacteria 68655
122 Ga0451577_0007470 3300042876 Bacteria 10734
123 Ga0453683_0000546 3300044673 Bacteria 41787
124 Ga0453683_0001118 3300044673 Bacteria 24483
125 Ga0453683_0003600 3300044673 Bacteria 11375
126 Ga0453683_0011038 3300044673 Bacteria 5971
127 Ga0453684_0001888 3300044712 Bacteria 54432
128 Ga0453684_0004008 3300044712 Bacteria 32105
129 Ga0453684_0009892 3300044712 Bacteria 16467
130 Ga0453684_0100200 3300044712 Bacteria 3546
131 Ga0451576_0000141 3300045051 Bacteria 183004
132 Ga0451576_0000474 3300045051 Bacteria 90757
133 Ga0451576_0000484 3300045051 Bacteria 87970
134 Ga0451576_0002021 3300045051 Bacteria 32067
135 Ga0451576_0011959 3300045051 Bacteria 9808
136 Ga0451576_0018259 3300045051 Bacteria 7692
137 Ga0495592_0011826 3300046454 Bacteria 6611
138 Ga0495638_0002983 3300046460 Bacteria 13504
139 Ga0495653_0052575 3300046463 Bacteria 3122
140 Ga0495580_0042311 3300046472 Bacteria 3246
141 Ga0495662_0021153 3300046476 Bacteria 3146
142 Ga0495664_0002391 3300046477 Bacteria 10067
143 Ga0495608_0045644 3300046511 Bacteria 2919
144 Ga0495630_0000090 3300046517 Bacteria 71226
145 Ga0495586_0000059 3300046535 Bacteria 66207
146 Ga0495645_0020920 3300046543 Bacteria 4728
147 Ga0495667_0000384 3300046559 Bacteria 28041
148 Ga0495599_0009939 3300046678 Bacteria 5824
149 Ga0495674_0000212 3300047319 Bacteria 48127
150 Ga0495674_0027888 3300047319 Bacteria 5156
151 Ga0495676_0035279 3300047321 Bacteria 4185
152 Ga0495680_0037144 3300047322 Bacteria 3904
153 Ga0496109_0000107 3300048912 Bacteria 86168
154 Ga0496109_0000139 3300048912 Bacteria 72541
155 Ga0496109_0035667 3300048912 Bacteria 4488
156 Ga0496112_0001920 3300048915 Bacteria 16398
157 Ga0501036_0031506 3300049572 Bacteria 4481
158 Ga0501039_0052999 3300049575 Bacteria 3139
159 Ga0501040_0041070 3300049576 Bacteria 3150
160 Ga0501047_0019113 3300049581 Bacteria 6574
161 Ga0501070_0002511 3300049586 Bacteria 16074
162 Ga0501076_0002581 3300049592 Bacteria 12453
163 Ga0501035_0025278 3300049822 Bacteria 5444
164 Ga0501044_0000491 3300049823 Bacteria 47931
165 nmdc:mga0k408_458_c1 3300050493 Bacteria 22385
166 nmdc:mga06z11_14180_c1 3300050494 Bacteria 3524
167 nmdc:mga05p37_101_c1 3300050507 Bacteria 77106
168 nmdc:mga05p37_5175_c1 3300050507 Bacteria 15297
169 nmdc:mga05p37_6879_c1 3300050507 Bacteria 13405
170 nmdc:mga05p37_68_c1 3300050507 Bacteria 91472
171 nmdc:mga05p37_70260_c1 3300050507 Bacteria 4307
172 nmdc:mga06r32_26757_c1 3300050510 Bacteria 5383
173 nmdc:mga08y16_31407_c1 3300050511 Bacteria 5586
174 nmdc:mga0n895_19877_c1 3300050512 Bacteria 6252
175 nmdc:mga0n895_77855_c1 3300050512 Bacteria 3299
176 Ga0500555_000135 3300053103 Bacteria 35097
177 Ga0500616_0000796 3300053153 Bacteria 36154
178 Ga0500645_000766 3300053730 Bacteria 19549
179 Ga0501084_0059079 3300054114 Bacteria 3209
180 Ga0501082_0046598 3300060353 Bacteria 3737
181 Ga0070698_100029883
182 Ga0065712_10000547
183 Ga0070683_100000006
184 Ga0070690_100028598
185 Ga0070680_100000115
186 Ga0070680_100074588
187 Ga0070669_100013403
188 Ga0070675_100004246
189 Ga0070674_100019759
190 Ga0070688_100000995
191 Ga0070694_100011434
192 Ga0070663_100017670
193 Ga0070681_10000336
194 Ga0070685_10008185
195 Ga0070706_100082191
196 Ga0070707_100029466
197 Ga0070698_100015461
198 Ga0070699_100041997
199 Ga0070699_100078125
200 Ga0070679_100000256
201 Ga0070684_100000018
202 Ga0070697_100005096
203 Ga0070696_100056967
204 Ga0070704_100011954
205 Ga0070704_100039780
206 Ga0068857_100010541
207 Ga0068856_100027846
208 Ga0068864_100013538
209 Ga0068863_100017867
210 Ga0068860_100028710
211 Ga0068862_100038446
212 Ga0081455_10006632
213 Ga0081455_10007021
214 Ga0081539_10008975
215 Ga0075428_100011640
216 Ga0075428_100057023
217 Ga0075428_100127795
218 Ga0075430_100009576
219 Ga0075431_100002684
220 Ga0075431_100083325
221 Ga0075434_100033372
222 Ga0075434_100037967
223 Ga0075429_100031344
224 Ga0105240_10000006
225 Ga0105240_10008541
226 Ga0105240_10008593
227 Ga0105240_10008623
228 Ga0111539_10001354
229 Ga0111539_10003903
230 Ga0111539_10016874
231 Ga0111539_10023128
232 Ga0111539_10059040
233 Ga0105247_10035240
234 Ga0114129_10003600
235 Ga0114129_10007589
236 Ga0114129_10024154
237 Ga0114129_10026834
238 Ga0114129_10046616
239 Ga0114129_10081777
240 Ga0105243_10004290
241 Ga0105242_10008739
242 Ga0105242_10025802
243 Ga0105242_10063743
244 Ga0105248_10010205
245 Ga0105248_10037728
246 Ga0105248_10047099
247 Ga0105237_10072590
248 Ga0105249_10103198
249 Ga0105239_10020457
250 Ga0157378_10052983
251 Ga0163162_10042763
252 Ga0157375_10040220
253 Ga0163163_10010906
254 Ga0157380_10006604
255 Ga0157377_10009379
256 Ga0157376_10092869
257 Ga0213876_10023078
258 Ga0213875_10000084
259 Ga0207707_10000190
260 Ga0207695_10000017
261 Ga0207695_10000988
262 Ga0207660_10000117
263 Ga0207662_10009492
264 Ga0207652_10000028
265 Ga0207646_10001984
266 Ga0207681_10029897
267 Ga0207669_10010534
268 Ga0207704_10053834
269 Ga0207691_10029201
270 Ga0207661_10000011
271 Ga0207712_10013303
272 Ga0207639_10050816
273 Ga0207678_10006508
274 Ga0207708_10045337
275 Ga0207702_10054786
276 Ga0207641_10015335
277 Ga0207648_10002171
278 Ga0207648_10007460
279 Ga0207674_10030033
280 Ga0207675_100040368
281 Ga0207428_10000595
282 Ga0207428_10004673
283 Ga0207428_10033041
284 Ga0268264_10013732
285 Ga0307515_10000005
286 Ga0265320_10002239
287 Ga0265320_10008267
288 Ga0265331_10009221
289 Ga0265316_10010976
290 Ga0307416_100066188
291 Ga0373927_0003912
292 Ga0373947_0018025
293 Ga0395905_0000018
294 Ga0436364_0880534
295 Ga0436364_0950392
296 Ga0436364_0962262
297 Ga0436364_1042639
298 Ga0436364_1109573
299 Ga0400490_14507
300 Ga0436365_0104260
301 Ga0451577_0000475
302 Ga0451577_0007470
303 Ga0453683_0000546
304 Ga0453683_0001118
305 Ga0453683_0003600
306 Ga0453683_0011038
307 Ga0453684_0001888
308 Ga0453684_0004008
309 Ga0453684_0009892
310 Ga0453684_0100200
311 Ga0451576_0000141
312 Ga0451576_0000474
313 Ga0451576_0000484
314 Ga0451576_0002021
315 Ga0451576_0011959
316 Ga0451576_0018259
317 Ga0495592_0011826
318 Ga0495638_0002983
319 Ga0495653_0052575
320 Ga0495580_0042311
321 Ga0495662_0021153
322 Ga0495664_0002391
323 Ga0495608_0045644
324 Ga0495630_0000090
325 Ga0495586_0000059
326 Ga0495645_0020920
327 Ga0495667_0000384
328 Ga0495599_0009939
329 Ga0495674_0000212
330 Ga0495674_0027888
331 Ga0495676_0035279
332 Ga0495680_0037144
333 Ga0496109_0000107
334 Ga0496109_0000139
335 Ga0496109_0035667
336 Ga0496112_0001920
337 Ga0501036_0031506
338 Ga0501039_0052999
339 Ga0501040_0041070
340 Ga0501047_0019113
341 Ga0501070_0002511
342 Ga0501076_0002581
343 Ga0501035_0025278
344 Ga0501044_0000491
345 nmdc:mga0k408_458_c1
346 nmdc:mga06z11_14180_c1
347 nmdc:mga05p37_101_c1
348 nmdc:mga05p37_5175_c1
349 nmdc:mga05p37_6879_c1
350 nmdc:mga05p37_68_c1
351 nmdc:mga05p37_70260_c1
352 nmdc:mga06r32_26757_c1
353 nmdc:mga08y16_31407_c1
354 nmdc:mga0n895_19877_c1
355 nmdc:mga0n895_77855_c1
356 Ga0500555_000135
357 Ga0500616_0000796
358 Ga0500645_000766
359 Ga0501084_0059079
360 Ga0501082_0046598

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20736

Glyco_hydro127M

Beta-L-arabinofuranosidase, GH127 middle domain

482

595

0.96

PF07944

Beta-AFase-like_GH127_cat

Beta-L-arabinofuranosidase, GH127 catalytic domain

84

473

0.94

PF20737

Glyco_hydro127C

Glycoside hydrolase family 127 C-terminal domain

597

703

0.82

PF00754

F5_F8_type_C

F5/8 type C domain

716

851

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ex6-assembly2.cif.gz_A the gh127, beta-arabinofuranosidase, bt3674 0.9602 34 665
6ex6-assembly2.cif.gz_A the gh127, beta-arabinofuranosidase, bt3674 0.9557 34 665
4qjy-assembly1.cif.gz_B crystal structure of native ara127n, a gh127 beta-l-arabinofuranosidase from geobacillus stearothermophilus t6 0.8953 46 657
3wrg-assembly1.cif.gz_A the complex structure of hypba1 with l-arabinose 0.8943 46 655
7dif-assembly1.cif.gz_A-2 gh127 beta-l-arabinofuranosidase hypba1 covalently complexed with beta-l-arabinofuranose-configured cyclophellitol at 1.75-angstrom resolution 0.8927 45 657
ID Description Score Start End Superfamily
4cuaB00 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.7851 673 805 2.60.120.260
3mo4B02 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.7743 673 805 2.60.120.260
4a42B00 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.7741 672 806 2.60.120.260
4cu9A00 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.7601 673 806 2.60.120.260
1tvgA00 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.7491 671 806 2.60.120.260
ID Description Score Start End GO Terms
AF-A0A356EQI6-F1-model_v4 Six-hairpin glycosidase 0.9851 692 806 GO:0016798
AF-A0A3E5HD28-F1-model_v4 deleted 0.9837 716 806
AF-A0A3N5EST6-F1-model_v4 Glycoside hydrolase family 127 protein 0.9822 673 806 GO:0016787
AF-A0A2N9MHE6-F1-model_v4 Uncharacterized protein 0.982 685 806
AF-X0UTH2-F1-model_v4 Non-reducing end beta-L-arabinofuranosidase-like GH127 catalytic domain-containing protein 0.9814 183 450 GO:0005975

Map