F274581

General Info

Members Datasets Scaffolds Average Seq Length
179 150 358 285

Family's Representative Sequence

Representative Sequence 3300050507|nmdc:mga05p37_149486_c1|nmdc:mga05p37_149486_c1_1141_2115
Length 324
Sequence MDRKVTKSLTSTDERSTTSKSNKEVVMKIAVRWTLVLLLIFAGKLQAQHQTHDHSLVEPQGEAAKPMDRDPSLPASEATAKAALDSSPRHGDWVDIKVEGSEKPVRTWIVYPEKKDKAPVVIVIHEIYGLTDWIRAVADQVAKEGFIGVAPDLISGKGPGGGNTDSVASRDDVVKLVRSLTPDEVASRLNAVRQYAISLPAANGKSASIGFCWGGSTSFSFATIQPNLNAAVVYYGTAPSDSSKLASIQAPVLGLYGGDDARVTATVEPTGAEMKKLSKLYDPNIYAGAGHGFLRAQEGKDGANLKATQQAWPKTIAFLRARTK

Samples

Sample ID Description Type Environment
1 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
34 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
44 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
47 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
48 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
70 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
110 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
111 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
113 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
114 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
115 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
120 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
121 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
124 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
125 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
126 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
131 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
134 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
135 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
138 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
139 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
140 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
141 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
142 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
143 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
147 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
148 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
149 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.26
Nodule 0
Rhizoplane 3.35
Rhizosphere 89.39
Stem 0
Stem Tuber 0
Unclassified 11.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga05p37_149486_c1 3300050507 Unclassified 2858
2 Ga0070676_10154808 3300005328 Bacteria 1470
3 Ga0070683_100000080 3300005329 Bacteria 65261
4 Ga0070690_100039297 3300005330 Bacteria 2989
5 Ga0070670_100055838 3300005331 Bacteria 3389
6 Ga0068869_100566298 3300005334 Bacteria 956
7 Ga0068868_100183583 3300005338 Bacteria 1736
8 Ga0070689_100031882 3300005340 Bacteria 4006
9 Ga0070687_100031164 3300005343 Bacteria 2614
10 Ga0070661_100013604 3300005344 Bacteria 5712
11 Ga0070675_100058246 3300005354 Bacteria 3186
12 Ga0070671_100004666 3300005355 Bacteria 10871
13 Ga0070673_100031111 3300005364 Bacteria 4002
14 Ga0070667_100316494 3300005367 Bacteria 1408
15 Ga0070703_10064331 3300005406 Bacteria 1208
16 Ga0070714_100260617 3300005435 Unclassified 1605
17 Ga0070705_100075543 3300005440 Bacteria 2052
18 Ga0070694_100402779 3300005444 Bacteria 1071
19 Ga0070708_100007008 3300005445 Bacteria 8992
20 Ga0070678_100249168 3300005456 Bacteria 1489
21 Ga0070681_10366439 3300005458 Bacteria 1351
22 Ga0068867_100079318 3300005459 Bacteria 2471
23 Ga0070706_100007940 3300005467 Bacteria 9909
24 Ga0070706_100042184 3300005467 Bacteria 4214
25 Ga0070706_100058939 3300005467 Bacteria 3543
26 Ga0070698_100229899 3300005471 Bacteria 1788
27 Ga0070679_100029939 3300005530 Bacteria 5371
28 Ga0070697_100431244 3300005536 Bacteria 1146
29 Ga0070697_100544343 3300005536 Unclassified 1018
30 Ga0070686_100012526 3300005544 Bacteria 4832
31 Ga0070695_100091011 3300005545 Bacteria 2037
32 Ga0070696_100004691 3300005546 Bacteria 9136
33 Ga0070665_100267270 3300005548 Bacteria 1711
34 Ga0070704_100104212 3300005549 Bacteria 2144
35 Ga0070664_100297073 3300005564 Unclassified 1459
36 Ga0068854_100248786 3300005578 Bacteria 1418
37 Ga0068854_100565803 3300005578 Unclassified 966
38 Ga0070702_100202750 3300005615 Bacteria 1314
39 Ga0068852_100272401 3300005616 Bacteria 1629
40 Ga0068859_100887891 3300005617 Bacteria 976
41 Ga0068866_10029010 3300005718 Bacteria 2642
42 Ga0068861_100360859 3300005719 Bacteria 1278
43 Ga0068870_10034709 3300005840 Bacteria 2582
44 Ga0068863_100002065 3300005841 Bacteria 19913
45 Ga0068863_100060843 3300005841 Bacteria 3571
46 Ga0068863_100100459 3300005841 Bacteria 2750
47 Ga0068860_100117710 3300005843 Bacteria 2542
48 Ga0068860_100132834 3300005843 Unclassified 2390
49 Ga0068862_100432061 3300005844 Bacteria 1238
50 Ga0075365_10013641 3300006038 Bacteria 4871
51 Ga0075368_10067932 3300006042 Bacteria 1436
52 Ga0075364_10029388 3300006051 Bacteria 3524
53 Ga0075364_10112747 3300006051 Bacteria 1816
54 Ga0070716_100021150 3300006173 Bacteria 3425
55 Ga0075362_10020095 3300006177 Bacteria 2787
56 Ga0075367_10005220 3300006178 Bacteria 6419
57 Ga0075366_10073253 3300006195 Bacteria 2041
58 Ga0075370_10196464 3300006353 Bacteria 1189
59 Ga0075431_100149582 3300006847 Bacteria 2405
60 Ga0075433_10032273 3300006852 Bacteria 4485
61 Ga0075434_100051014 3300006871 Bacteria 4110
62 Ga0075434_100146116 3300006871 Bacteria 2385
63 Ga0068865_100084282 3300006881 Bacteria 2290
64 Ga0097620_100887878 3300006931 Bacteria 976
65 Ga0075435_100016031 3300007076 Bacteria 5643
66 Ga0105240_10542631 3300009093 Bacteria 1287
67 Ga0111539_10293160 3300009094 Bacteria 1893
68 Ga0111539_10301160 3300009094 Bacteria 1866
69 Ga0114129_10043384 3300009147 Bacteria 6327
70 Ga0105243_10447546 3300009148 Bacteria 1211
71 Ga0105242_10310896 3300009176 Bacteria 1442
72 Ga0105248_10035930 3300009177 Bacteria 5543
73 Ga0105249_10273407 3300009553 Bacteria 1684
74 Ga0105239_10228568 3300010375 Unclassified 2087
75 Ga0157373_10035812 3300013100 Unclassified 3562
76 Ga0163162_10051407 3300013306 Bacteria 4135
77 Ga0163162_10166330 3300013306 Unclassified 2329
78 Ga0157372_10344011 3300013307 Bacteria 1737
79 Ga0157375_10024497 3300013308 Bacteria 5587
80 Ga0163163_10634466 3300014325 Bacteria 1132
81 Ga0157380_10057248 3300014326 Unclassified 3103
82 Ga0157376_10053763 3300014969 Bacteria 3355
83 Ga0207697_10044772 3300025315 Bacteria 1821
84 Ga0207653_10047576 3300025885 Bacteria 1420
85 Ga0207642_10046002 3300025899 Bacteria 1941
86 Ga0207645_10104705 3300025907 Bacteria 1827
87 Ga0207705_10391981 3300025909 Bacteria 1073
88 Ga0207684_10095595 3300025910 Unclassified 2535
89 Ga0207684_10112375 3300025910 Bacteria 2332
90 Ga0207660_10040449 3300025917 Bacteria 3264
91 Ga0207662_10022827 3300025918 Bacteria 3591
92 Ga0207646_10507072 3300025922 Unclassified 1087
93 Ga0207650_10073911 3300025925 Bacteria 2569
94 Ga0207650_10218446 3300025925 Unclassified 1533
95 Ga0207659_10083824 3300025926 Bacteria 2364
96 Ga0207664_10160466 3300025929 Unclassified 1917
97 Ga0207644_10047870 3300025931 Bacteria 3053
98 Ga0207690_10079649 3300025932 Bacteria 2283
99 Ga0207706_10019784 3300025933 Bacteria 6053
100 Ga0207709_10403792 3300025935 Bacteria 1045
101 Ga0207670_10027005 3300025936 Bacteria 3624
102 Ga0207670_10262855 3300025936 Bacteria 1338
103 Ga0207669_10033148 3300025937 Bacteria 2911
104 Ga0207665_10105749 3300025939 Bacteria 1971
105 Ga0207691_10000290 3300025940 Bacteria 49578
106 Ga0207691_10008885 3300025940 Bacteria 9648
107 Ga0207689_10293024 3300025942 Bacteria 1348
108 Ga0207651_10007469 3300025960 Bacteria 5825
109 Ga0207651_10587613 3300025960 Bacteria 972
110 Ga0207640_10296330 3300025981 Bacteria 1277
111 Ga0207658_10343778 3300025986 Bacteria 1297
112 Ga0207677_10379940 3300026023 Bacteria 1192
113 Ga0207703_10149635 3300026035 Unclassified 2034
114 Ga0207641_10072500 3300026088 Bacteria 2966
115 Ga0207648_10108280 3300026089 Bacteria 2439
116 Ga0207675_100007426 3300026118 Bacteria 10357
117 Ga0207675_100262635 3300026118 Bacteria 1674
118 Ga0207675_100597963 3300026118 Bacteria 1106
119 Ga0207683_10093358 3300026121 Bacteria 2682
120 Ga0207683_10094604 3300026121 Unclassified 2663
121 Ga0207698_10014002 3300026142 Bacteria 5313
122 Ga0209974_10036509 3300027876 Bacteria 1632
123 Ga0268266_10000506 3300028379 Bacteria 55170
124 Ga0268266_10588307 3300028379 Unclassified 1068
125 Ga0268265_10082389 3300028380 Bacteria 2544
126 Ga0265337_1073491 3300028556 Unclassified 938
127 Ga0307408_100237861 3300031548 Bacteria 1495
128 Ga0307405_10070571 3300031731 Bacteria 2244
129 Ga0307410_10055911 3300031852 Bacteria 2681
130 Ga0373926_0029007 3300035083 Bacteria 1944
131 Ga0373923_0136693 3300035111 Bacteria 1105
132 Ga0373939_0032857 3300035114 Bacteria 1511
133 Ga0373953_0010712 3300035117 Unclassified 3200
134 Ga0373960_0034239 3300035121 Bacteria 1436
135 Ga0373943_0108139 3300035170 Bacteria 1463
136 Ga0373937_0005440 3300036401 Bacteria 10904
137 Ga0373937_0009457 3300036401 Bacteria 8472
138 Ga0373937_0214843 3300036401 Bacteria 1810
139 Ga0373925_0147400 3300037068 Bacteria 1845
140 Ga0395905_0499267 3300037471 Bacteria 1117
141 Ga0453683_0117966 3300044673 Bacteria 1670
142 Ga0466966_0011899 3300044684 Bacteria 5765
143 Ga0466959_0001231 3300045049 Bacteria 15463
144 Ga0451576_0085290 3300045051 Bacteria 3285
145 Ga0495662_0033527 3300046476 Bacteria 2481
146 Ga0495586_0139981 3300046535 Bacteria 1358
147 Ga0495634_0041088 3300046642 Bacteria 3142
148 Ga0495635_0022034 3300046663 Bacteria 4440
149 Ga0495604_0175896 3300047317 Bacteria 1501
150 Ga0495602_0026045 3300048088 Bacteria 5649
151 Ga0496104_0121849 3300048907 Bacteria 2504
152 Ga0496105_0390024 3300048908 Bacteria 1107
153 Ga0496106_0171037 3300048909 Unclassified 1722
154 Ga0496109_0030143 3300048912 Bacteria 4863
155 Ga0496110_0166722 3300048913 Unclassified 1997
156 Ga0496112_0604968 3300048915 Bacteria 1028
157 Ga0501034_0002844 3300049571 Bacteria 20171
158 Ga0501047_0301478 3300049581 Bacteria 1445
159 Ga0501079_0410567 3300049741 Bacteria 1062
160 Ga0501080_0179520 3300049742 Bacteria 1949
161 Ga0501080_0417924 3300049742 Bacteria 1205
162 nmdc:mga00v17_159810_c1 3300050491 Bacteria 1450
163 nmdc:mga00v17_8273_c1 3300050491 Bacteria 5596
164 nmdc:mga0yw44_131775_c1 3300050492 Bacteria 1619
165 nmdc:mga06z11_189612_c1 3300050494 Bacteria 1190
166 nmdc:mga07m45_5162_c1 3300050496 Bacteria 6472
167 nmdc:mga05p37_149770_c1 3300050507 Bacteria 2855
168 nmdc:mga05p37_230394_c1 3300050507 Bacteria 2232
169 nmdc:mga06r32_111311_c1 3300050510 Bacteria 2694
170 nmdc:mga0n895_145143_c1 3300050512 Bacteria 2402
171 nmdc:mga0n895_222900_c1 3300050512 Bacteria 1914
172 nmdc:mga0rr50_19500_c1 3300050513 Bacteria 4580
173 nmdc:mga0rr50_552451_c1 3300050513 Bacteria 980
174 Ga0495601_0030931 3300053077 Bacteria 3327
175 Ga0495619_0010532 3300053085 Bacteria 5817
176 Ga0590075_029847 3300059424 Bacteria 1379
177 Ga0590077_041841 3300059426 Bacteria 1019
178 Ga0501082_0030046 3300060353 Bacteria 4682
179 Ga0501082_0044587 3300060353 Bacteria 3825
180 nmdc:mga05p37_149486_c1
181 Ga0070676_10154808
182 Ga0070683_100000080
183 Ga0070690_100039297
184 Ga0070670_100055838
185 Ga0068869_100566298
186 Ga0068868_100183583
187 Ga0070689_100031882
188 Ga0070687_100031164
189 Ga0070661_100013604
190 Ga0070675_100058246
191 Ga0070671_100004666
192 Ga0070673_100031111
193 Ga0070667_100316494
194 Ga0070703_10064331
195 Ga0070714_100260617
196 Ga0070705_100075543
197 Ga0070694_100402779
198 Ga0070708_100007008
199 Ga0070678_100249168
200 Ga0070681_10366439
201 Ga0068867_100079318
202 Ga0070706_100007940
203 Ga0070706_100042184
204 Ga0070706_100058939
205 Ga0070698_100229899
206 Ga0070679_100029939
207 Ga0070697_100431244
208 Ga0070697_100544343
209 Ga0070686_100012526
210 Ga0070695_100091011
211 Ga0070696_100004691
212 Ga0070665_100267270
213 Ga0070704_100104212
214 Ga0070664_100297073
215 Ga0068854_100248786
216 Ga0068854_100565803
217 Ga0070702_100202750
218 Ga0068852_100272401
219 Ga0068859_100887891
220 Ga0068866_10029010
221 Ga0068861_100360859
222 Ga0068870_10034709
223 Ga0068863_100002065
224 Ga0068863_100060843
225 Ga0068863_100100459
226 Ga0068860_100117710
227 Ga0068860_100132834
228 Ga0068862_100432061
229 Ga0075365_10013641
230 Ga0075368_10067932
231 Ga0075364_10029388
232 Ga0075364_10112747
233 Ga0070716_100021150
234 Ga0075362_10020095
235 Ga0075367_10005220
236 Ga0075366_10073253
237 Ga0075370_10196464
238 Ga0075431_100149582
239 Ga0075433_10032273
240 Ga0075434_100051014
241 Ga0075434_100146116
242 Ga0068865_100084282
243 Ga0097620_100887878
244 Ga0075435_100016031
245 Ga0105240_10542631
246 Ga0111539_10293160
247 Ga0111539_10301160
248 Ga0114129_10043384
249 Ga0105243_10447546
250 Ga0105242_10310896
251 Ga0105248_10035930
252 Ga0105249_10273407
253 Ga0105239_10228568
254 Ga0157373_10035812
255 Ga0163162_10051407
256 Ga0163162_10166330
257 Ga0157372_10344011
258 Ga0157375_10024497
259 Ga0163163_10634466
260 Ga0157380_10057248
261 Ga0157376_10053763
262 Ga0207697_10044772
263 Ga0207653_10047576
264 Ga0207642_10046002
265 Ga0207645_10104705
266 Ga0207705_10391981
267 Ga0207684_10095595
268 Ga0207684_10112375
269 Ga0207660_10040449
270 Ga0207662_10022827
271 Ga0207646_10507072
272 Ga0207650_10073911
273 Ga0207650_10218446
274 Ga0207659_10083824
275 Ga0207664_10160466
276 Ga0207644_10047870
277 Ga0207690_10079649
278 Ga0207706_10019784
279 Ga0207709_10403792
280 Ga0207670_10027005
281 Ga0207670_10262855
282 Ga0207669_10033148
283 Ga0207665_10105749
284 Ga0207691_10000290
285 Ga0207691_10008885
286 Ga0207689_10293024
287 Ga0207651_10007469
288 Ga0207651_10587613
289 Ga0207640_10296330
290 Ga0207658_10343778
291 Ga0207677_10379940
292 Ga0207703_10149635
293 Ga0207641_10072500
294 Ga0207648_10108280
295 Ga0207675_100007426
296 Ga0207675_100262635
297 Ga0207675_100597963
298 Ga0207683_10093358
299 Ga0207683_10094604
300 Ga0207698_10014002
301 Ga0209974_10036509
302 Ga0268266_10000506
303 Ga0268266_10588307
304 Ga0268265_10082389
305 Ga0265337_1073491
306 Ga0307408_100237861
307 Ga0307405_10070571
308 Ga0307410_10055911
309 Ga0373926_0029007
310 Ga0373923_0136693
311 Ga0373939_0032857
312 Ga0373953_0010712
313 Ga0373960_0034239
314 Ga0373943_0108139
315 Ga0373937_0005440
316 Ga0373937_0009457
317 Ga0373937_0214843
318 Ga0373925_0147400
319 Ga0395905_0499267
320 Ga0453683_0117966
321 Ga0466966_0011899
322 Ga0466959_0001231
323 Ga0451576_0085290
324 Ga0495662_0033527
325 Ga0495586_0139981
326 Ga0495634_0041088
327 Ga0495635_0022034
328 Ga0495604_0175896
329 Ga0495602_0026045
330 Ga0496104_0121849
331 Ga0496105_0390024
332 Ga0496106_0171037
333 Ga0496109_0030143
334 Ga0496110_0166722
335 Ga0496112_0604968
336 Ga0501034_0002844
337 Ga0501047_0301478
338 Ga0501079_0410567
339 Ga0501080_0179520
340 Ga0501080_0417924
341 nmdc:mga00v17_159810_c1
342 nmdc:mga00v17_8273_c1
343 nmdc:mga0yw44_131775_c1
344 nmdc:mga06z11_189612_c1
345 nmdc:mga07m45_5162_c1
346 nmdc:mga05p37_149770_c1
347 nmdc:mga05p37_230394_c1
348 nmdc:mga06r32_111311_c1
349 nmdc:mga0n895_145143_c1
350 nmdc:mga0n895_222900_c1
351 nmdc:mga0rr50_19500_c1
352 nmdc:mga0rr50_552451_c1
353 Ga0495601_0030931
354 Ga0495619_0010532
355 Ga0590075_029847
356 Ga0590077_041841
357 Ga0501082_0030046
358 Ga0501082_0044587

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01738

DLH

Dienelactone hydrolase family

105

323

0.94

PF07224

Chlorophyllase

Chlorophyllase

79

272

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zv9-assembly6.cif.gz_F 2.00 angstrom resolution crystal structure of an uncharacterized protein from escherichia coli o157:h7 str. sakai 0.9003 45 278
1ggv-assembly1.cif.gz_A crystal structure of the c123s mutant of dienelactone hydrolase (dlh) bound with the pms moiety of the protease inhibitor, phenylmethylsulfonyl fluoride (pmsf) 0.8634 50 279
4u2g-assembly1.cif.gz_A crystal structure of dienelactone hydrolase b-4 variant (q35h, f38l, y64h, q76l, q110l, c123s, y137c, a141v, y145c, n154d, e199g, s208g, g211d, s233g and 237q) at 1.80 a resolution 0.8631 50 280
4u2e-assembly1.cif.gz_A crystal structure of dienelactone hydrolase s-3 variant (q35h, f38l, q110l, c123s, y137c, y145c, n154d, e199g, s208g, g211d and k234n) at 1.70 a resolution 0.8611 50 280
1zix-assembly1.cif.gz_A crystal structure analysis of the dienelactone hydrolase mutant (e36d, r105h, c123s, g211d, k234n)- 1.8 a 0.8599 50 280
ID Description Score Start End Superfamily
4zv9B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9037 45 278 3.40.50.1820
4zv9B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8561 45 278 3.40.50.1820
4zi5A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8532 45 280 3.40.50.1820
1zi9A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8437 50 280 3.40.50.1820
3f67A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8426 43 276 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A7Z9QZG5-F1-model_v4 Dienelactone hydrolase domain-containing protein 0.9839 42 185 GO:0016787
AF-A0A3D2WCD0-F1-model_v4 Carboxymethylenebutenolidase 0.9811 42 278 GO:0016787
AF-A0A1F6CSA3-F1-model_v4 Carboxymethylenebutenolidase 0.9707 64 280 GO:0016787
AF-A0A355EZJ9-F1-model_v4 Carboxymethylenebutenolidase 0.9687 40 280 GO:0016787
AF-A0A1F2R409-F1-model_v4 Beta-lactamase-related domain-containing protein 0.9667 38 280 GO:0016787

Map