F274048

General Info

Members Datasets Scaffolds Average Seq Length
179 133 358 538

Family's Representative Sequence

Representative Sequence 3300031247|Ga0265340_10017049|Ga0265340_100170492
Length 533
Sequence LDTQVLIVGAGPTGLTLAIALGQAGVRCTLIEQKEAPQFLPKMERCNARTMEIYRRMGIAETVRSAGLPAQCPMDVFIVLSVVEPPLVHHPYPSVVEAKAQIAACRDGTLPLEPYQLISQYTLEPLLKSVAERLPTVTVRYGCALEAFSQDQESITAQVRTAGGKIETIRAAYMAGCDGGGSLVRRQLGIALTGEANILQLRQALYYCEDLFERIPIGKGRHYHVADGRATFLIVQDSAKHFTLHSVVENDADMATMFERTIAMPLRYDMLYVGAWKQNLLLADRYRDGRVFLAGDAVHLMIPTGGLGMNSGAGDAIDLAWKLAATLQGWGGPNLLASYEIERRQIGERNVAASRYASQGRRKWRSMYRPNIRDDTPEGAETRANLTRVAETEQRKSNEMIGAELGYRYAASPLIWPETGEEPEHDFREYRPTTWPGTRLPHVWLDDGTAMQDRIGRGYTLLRLGGIQADASALERAFQTSRAPFEVLDVPDETPRAVYGHDLLLLRPDLHVVWRGNRLPDDPARLVAVATGC

Samples

Sample ID Description Type Environment
1 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
41 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
42 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
65 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
66 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
67 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
68 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
69 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
70 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
71 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
72 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
73 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
76 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
77 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
80 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
81 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
85 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
86 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
87 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
88 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
89 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
95 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
99 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
100 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
101 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
102 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
109 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
116 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
117 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
118 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
119 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
120 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
121 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
122 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
123 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
125 2582581306 Rhizobium sp. YR295 Isolate Rhizosphere
126 2582581865 Rhizobium sp. CF258 Isolate Rhizosphere
127 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
128 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
129 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
130 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
131 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
132 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
133 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.97
Metatranscriptomes 0
Isolates 5.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.47
Nodule 0
Rhizoplane 4.47
Rhizosphere 82.68
Stem 0
Stem Tuber 0
Unclassified 0.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265340_10017049 3300031247 Bacteria 3756
2 JGI25151J46595_10013497 3300003187 Bacteria 3674
3 Ga0065707_10009700 3300005295 Bacteria 3032
4 Ga0068869_100073639 3300005334 Bacteria 2533
5 Ga0070680_100118097 3300005336 Bacteria 2212
6 Ga0070689_100002005 3300005340 Bacteria 13198
7 Ga0070671_100025269 3300005355 Bacteria 4872
8 Ga0070714_100087540 3300005435 Bacteria 2724
9 Ga0070714_100092425 3300005435 Bacteria 2652
10 Ga0070708_100078161 3300005445 Bacteria 2991
11 Ga0070681_10229154 3300005458 Bacteria 1772
12 Ga0068867_100071669 3300005459 Bacteria 2592
13 Ga0070698_100118630 3300005471 Bacteria 2607
14 Ga0070699_100011737 3300005518 Bacteria 7562
15 Ga0070699_100042641 3300005518 Bacteria 3927
16 Ga0070697_100038342 3300005536 Bacteria 3871
17 Ga0070686_100105674 3300005544 Bacteria 1909
18 Ga0070696_100016170 3300005546 Bacteria 5019
19 Ga0070696_100086471 3300005546 Bacteria 2226
20 Ga0068859_100242845 3300005617 Bacteria 1890
21 Ga0068863_100050673 3300005841 Bacteria 3935
22 Ga0068858_100004874 3300005842 Bacteria 13162
23 Ga0068860_100240259 3300005843 Bacteria 1761
24 Ga0081539_10003048 3300005985 Bacteria 21654
25 Ga0070717_10000323 3300006028 Bacteria 31188
26 Ga0075365_10069067 3300006038 Bacteria 2375
27 Ga0070716_100005129 3300006173 Bacteria 6330
28 Ga0070712_100045795 3300006175 Bacteria 3022
29 Ga0075428_100038904 3300006844 Bacteria 5234
30 Ga0075428_100053486 3300006844 Bacteria 4424
31 Ga0075430_100091150 3300006846 Bacteria 2549
32 Ga0075431_100039363 3300006847 Bacteria 4870
33 Ga0075433_10013179 3300006852 Bacteria 6712
34 Ga0075434_100000396 3300006871 Bacteria 31984
35 Ga0075434_100008950 3300006871 Bacteria 9323
36 Ga0075434_100009594 3300006871 Bacteria 9035
37 Ga0075436_100002973 3300006914 Bacteria 11602
38 Ga0075436_100007190 3300006914 Bacteria 7613
39 Ga0097620_100242851 3300006931 Bacteria 1890
40 Ga0075435_100000044 3300007076 Bacteria 62958
41 Ga0075435_100002527 3300007076 Bacteria 12171
42 Ga0075435_100002621 3300007076 Bacteria 11986
43 Ga0075435_100078356 3300007076 Bacteria 2710
44 Ga0099794_10000137 3300007265 Bacteria 26849
45 Ga0099794_10014344 3300007265 Bacteria 3471
46 Ga0105251_10014814 3300009011 Bacteria 4289
47 Ga0114129_10006413 3300009147 Bacteria 16679
48 Ga0114129_10006563 3300009147 Bacteria 16511
49 Ga0114129_10059976 3300009147 Bacteria 5320
50 Ga0114129_10092463 3300009147 Bacteria 4190
51 Ga0099796_10005270 3300010159 Bacteria 3212
52 Ga0157378_10013753 3300013297 Bacteria 7079
53 Ga0157378_10147291 3300013297 Bacteria 2191
54 Ga0157379_10009680 3300014968 Bacteria 8389
55 Ga0209129_1000209 3300025258 Bacteria 68109
56 Ga0209025_1001222 3300025294 Bacteria 35884
57 Ga0209025_1003738 3300025294 Bacteria 13954
58 Ga0209051_1019474 3300025303 Bacteria 2959
59 Ga0207642_10031760 3300025899 Bacteria 2216
60 Ga0207645_10011964 3300025907 Bacteria 5903
61 Ga0207693_10013990 3300025915 Bacteria 6462
62 Ga0207662_10007412 3300025918 Bacteria 5973
63 Ga0207687_10038640 3300025927 Bacteria 3263
64 Ga0207700_10011391 3300025928 Bacteria 5666
65 Ga0207700_10079721 3300025928 Bacteria 2551
66 Ga0207644_10062985 3300025931 Bacteria 2691
67 Ga0207665_10009124 3300025939 Bacteria 6511
68 Ga0207691_10070559 3300025940 Bacteria 3154
69 Ga0207651_10002804 3300025960 Bacteria 8377
70 Ga0207640_10020264 3300025981 Bacteria 3946
71 Ga0207658_10038084 3300025986 Bacteria 3462
72 Ga0207703_10009428 3300026035 Bacteria 7667
73 Ga0207708_10008121 3300026075 Bacteria 7772
74 Ga0207648_10085660 3300026089 Bacteria 2749
75 Ga0207675_100023879 3300026118 Bacteria 5687
76 Ga0207683_10086846 3300026121 Bacteria 2781
77 Ga0209179_1000777 3300027512 Bacteria 3470
78 Ga0209588_1000221 3300027671 Bacteria 15257
79 Ga0207428_10012735 3300027907 Bacteria 7375
80 Ga0268264_10171003 3300028381 Bacteria 1965
81 Ga0307511_10000470 3300030521 Bacteria 43625
82 Ga0265332_10002934 3300031238 Bacteria 8389
83 Ga0265320_10016175 3300031240 Bacteria 4190
84 Ga0265340_10001308 3300031247 Bacteria 14259
85 Ga0265340_10033943 3300031247 Bacteria 2538
86 Ga0265316_10049112 3300031344 Bacteria 3325
87 Ga0265313_10010208 3300031595 Bacteria 5983
88 Ga0265314_10045782 3300031711 Bacteria 3090
89 Ga0265342_10002113 3300031712 Bacteria 17530
90 Ga0307516_10002130 3300031730 Bacteria 26799
91 Ga0307510_10002345 3300033180 Bacteria 21401
92 Ga0307510_10025490 3300033180 Bacteria 6817
93 Ga0307510_10042033 3300033180 Bacteria 4986
94 Ga0307510_10063852 3300033180 Bacteria 3744
95 Ga0373943_0000487 3300035170 Bacteria 16900
96 Ga0373935_0001143 3300035692 Bacteria 14514
97 Ga0373927_0001077 3300035695 Bacteria 20855
98 Ga0373927_0003203 3300035695 Bacteria 11789
99 Ga0373947_0000063 3300035725 Bacteria 53746
100 Ga0373947_0061353 3300035725 Bacteria 2285
101 Ga0373925_0000456 3300037068 Bacteria 41315
102 Ga0373925_0056140 3300037068 Bacteria 2949
103 Ga0436365_1288667 3300039437 Bacteria 3531
104 Ga0466957_0080326 3300044842 Bacteria 2030
105 Ga0466959_0138374 3300045049 Unclassified 1722
106 Ga0495638_0005923 3300046460 Bacteria 8975
107 Ga0495651_0074023 3300046462 Bacteria 2585
108 Ga0495653_0066550 3300046463 Bacteria 2710
109 Ga0495580_0023834 3300046472 Bacteria 4488
110 Ga0495580_0077912 3300046472 Bacteria 2312
111 Ga0495662_0008241 3300046476 Bacteria 5133
112 Ga0495606_0001364 3300046507 Bacteria 33033
113 Ga0495652_0023276 3300046529 Bacteria 5492
114 Ga0495640_0026947 3300046533 Bacteria 4147
115 Ga0495609_0018817 3300046538 Bacteria 3199
116 Ga0495645_0019230 3300046543 Bacteria 4917
117 Ga0495634_0001678 3300046642 Bacteria 19291
118 Ga0495634_0052253 3300046642 Bacteria 2739
119 Ga0495635_0029509 3300046663 Bacteria 3814
120 Ga0495658_0024508 3300046683 Bacteria 3215
121 Ga0495624_0003868 3300046690 Bacteria 11056
122 Ga0495624_0024760 3300046690 Bacteria 3947
123 Ga0495636_0024564 3300047318 Bacteria 2445
124 Ga0495674_0002228 3300047319 Bacteria 19072
125 Ga0496100_0032079 3300048903 Bacteria 3272
126 Ga0496104_0006193 3300048907 Bacteria 10506
127 Ga0496104_0063256 3300048907 Bacteria 3509
128 Ga0496104_0070190 3300048907 Bacteria 3330
129 Ga0496105_0018842 3300048908 Bacteria 5558
130 Ga0496106_0049474 3300048909 Bacteria 3167
131 Ga0496109_0039628 3300048912 Bacteria 4265
132 Ga0496121_0003694 3300048924 Bacteria 21478
133 Ga0496121_0018399 3300048924 Bacteria 7046
134 Ga0496121_0035884 3300048924 Bacteria 4430
135 Ga0496126_0057486 3300048929 Bacteria 3511
136 Ga0501036_0013468 3300049572 Bacteria 6797
137 Ga0501038_0060193 3300049574 Bacteria 3250
138 Ga0501038_0089017 3300049574 Bacteria 2590
139 Ga0501039_0066656 3300049575 Bacteria 2795
140 Ga0501047_0048162 3300049581 Bacteria 4116
141 Ga0501070_0134470 3300049586 Bacteria 2042
142 Ga0501083_0059978 3300049744 Bacteria 2543
143 Ga0501035_0024991 3300049822 Bacteria 5478
144 Ga0501044_0131044 3300049823 Bacteria 2501
145 nmdc:mga05p37_108738_c1 3300050507 Bacteria 3411
146 nmdc:mga05p37_132933_c1 3300050507 Bacteria 3052
147 nmdc:mga05p37_26507_c1 3300050507 Bacteria 7049
148 nmdc:mga05p37_31358_c1 3300050507 Bacteria 6492
149 nmdc:mga05p37_32468_c1 3300050507 Bacteria 6384
150 nmdc:mga05p37_36493_c1 3300050507 Bacteria 6030
151 nmdc:mga05p37_5960_c2 3300050507 Bacteria 12647
152 nmdc:mga05p37_87935_c1 3300050507 Bacteria 3830
153 nmdc:mga06r32_103590_c1 3300050510 Bacteria 2794
154 nmdc:mga08y16_189772_c1 3300050511 Bacteria 2132
155 nmdc:mga08y16_314035_c1 3300050511 Bacteria 1614
156 nmdc:mga0n895_128665_c1 3300050512 Bacteria 2557
157 nmdc:mga0n895_19_c1 3300050512 Bacteria 95133
158 nmdc:mga0n895_33824_c1 3300050512 Bacteria 4914
159 nmdc:mga0rr50_10_c1 3300050513 Bacteria 218067
160 nmdc:mga08x19_378_c1 3300050514 Bacteria 31201
161 nmdc:mga08x19_4633_c1 3300050514 Bacteria 8161
162 nmdc:mga08x19_90460_c1 3300050514 Bacteria 2020
163 nmdc:mga0a205_75684_c1 3300050515 Bacteria 3253
164 Ga0495601_0002493 3300053077 Bacteria 10469
165 Ga0495601_0018379 3300053077 Bacteria 4254
166 Ga0495612_0000270 3300053078 Bacteria 21369
167 Ga0495619_0003287 3300053085 Bacteria 10453
168 Ga0500643_002429 3300053087 Bacteria 9654
169 Ga0500619_000107 3300053154 Bacteria 22570
170 Ga0501082_0012892 3300060353 Bacteria 7185
171 2585269772 2582581306 Bacteria 6450535
172 2585391102 2582581865 Bacteria 6644329
173 2765468978 2765235802 Bacteria 5618596
174 2838079104 2838074704 Bacteria 6785777
175 2896385762 2896384573 Bacteria 7700774
176 2904584083 2904578770 Bacteria 5302906
177 2919124982 2919119836 Bacteria 5208557
178 2920766433 2920760137 Bacteria 7427611
179 3005413997 3005409236 Bacteria 7188837
180 Ga0265340_10017049
181 JGI25151J46595_10013497
182 Ga0065707_10009700
183 Ga0068869_100073639
184 Ga0070680_100118097
185 Ga0070689_100002005
186 Ga0070671_100025269
187 Ga0070714_100087540
188 Ga0070714_100092425
189 Ga0070708_100078161
190 Ga0070681_10229154
191 Ga0068867_100071669
192 Ga0070698_100118630
193 Ga0070699_100011737
194 Ga0070699_100042641
195 Ga0070697_100038342
196 Ga0070686_100105674
197 Ga0070696_100016170
198 Ga0070696_100086471
199 Ga0068859_100242845
200 Ga0068863_100050673
201 Ga0068858_100004874
202 Ga0068860_100240259
203 Ga0081539_10003048
204 Ga0070717_10000323
205 Ga0075365_10069067
206 Ga0070716_100005129
207 Ga0070712_100045795
208 Ga0075428_100038904
209 Ga0075428_100053486
210 Ga0075430_100091150
211 Ga0075431_100039363
212 Ga0075433_10013179
213 Ga0075434_100000396
214 Ga0075434_100008950
215 Ga0075434_100009594
216 Ga0075436_100002973
217 Ga0075436_100007190
218 Ga0097620_100242851
219 Ga0075435_100000044
220 Ga0075435_100002527
221 Ga0075435_100002621
222 Ga0075435_100078356
223 Ga0099794_10000137
224 Ga0099794_10014344
225 Ga0105251_10014814
226 Ga0114129_10006413
227 Ga0114129_10006563
228 Ga0114129_10059976
229 Ga0114129_10092463
230 Ga0099796_10005270
231 Ga0157378_10013753
232 Ga0157378_10147291
233 Ga0157379_10009680
234 Ga0209129_1000209
235 Ga0209025_1001222
236 Ga0209025_1003738
237 Ga0209051_1019474
238 Ga0207642_10031760
239 Ga0207645_10011964
240 Ga0207693_10013990
241 Ga0207662_10007412
242 Ga0207687_10038640
243 Ga0207700_10011391
244 Ga0207700_10079721
245 Ga0207644_10062985
246 Ga0207665_10009124
247 Ga0207691_10070559
248 Ga0207651_10002804
249 Ga0207640_10020264
250 Ga0207658_10038084
251 Ga0207703_10009428
252 Ga0207708_10008121
253 Ga0207648_10085660
254 Ga0207675_100023879
255 Ga0207683_10086846
256 Ga0209179_1000777
257 Ga0209588_1000221
258 Ga0207428_10012735
259 Ga0268264_10171003
260 Ga0307511_10000470
261 Ga0265332_10002934
262 Ga0265320_10016175
263 Ga0265340_10001308
264 Ga0265340_10033943
265 Ga0265316_10049112
266 Ga0265313_10010208
267 Ga0265314_10045782
268 Ga0265342_10002113
269 Ga0307516_10002130
270 Ga0307510_10002345
271 Ga0307510_10025490
272 Ga0307510_10042033
273 Ga0307510_10063852
274 Ga0373943_0000487
275 Ga0373935_0001143
276 Ga0373927_0001077
277 Ga0373927_0003203
278 Ga0373947_0000063
279 Ga0373947_0061353
280 Ga0373925_0000456
281 Ga0373925_0056140
282 Ga0436365_1288667
283 Ga0466957_0080326
284 Ga0466959_0138374
285 Ga0495638_0005923
286 Ga0495651_0074023
287 Ga0495653_0066550
288 Ga0495580_0023834
289 Ga0495580_0077912
290 Ga0495662_0008241
291 Ga0495606_0001364
292 Ga0495652_0023276
293 Ga0495640_0026947
294 Ga0495609_0018817
295 Ga0495645_0019230
296 Ga0495634_0001678
297 Ga0495634_0052253
298 Ga0495635_0029509
299 Ga0495658_0024508
300 Ga0495624_0003868
301 Ga0495624_0024760
302 Ga0495636_0024564
303 Ga0495674_0002228
304 Ga0496100_0032079
305 Ga0496104_0006193
306 Ga0496104_0063256
307 Ga0496104_0070190
308 Ga0496105_0018842
309 Ga0496106_0049474
310 Ga0496109_0039628
311 Ga0496121_0003694
312 Ga0496121_0018399
313 Ga0496121_0035884
314 Ga0496126_0057486
315 Ga0501036_0013468
316 Ga0501038_0060193
317 Ga0501038_0089017
318 Ga0501039_0066656
319 Ga0501047_0048162
320 Ga0501070_0134470
321 Ga0501083_0059978
322 Ga0501035_0024991
323 Ga0501044_0131044
324 nmdc:mga05p37_108738_c1
325 nmdc:mga05p37_132933_c1
326 nmdc:mga05p37_26507_c1
327 nmdc:mga05p37_31358_c1
328 nmdc:mga05p37_32468_c1
329 nmdc:mga05p37_36493_c1
330 nmdc:mga05p37_5960_c2
331 nmdc:mga05p37_87935_c1
332 nmdc:mga06r32_103590_c1
333 nmdc:mga08y16_189772_c1
334 nmdc:mga08y16_314035_c1
335 nmdc:mga0n895_128665_c1
336 nmdc:mga0n895_19_c1
337 nmdc:mga0n895_33824_c1
338 nmdc:mga0rr50_10_c1
339 nmdc:mga08x19_378_c1
340 nmdc:mga08x19_4633_c1
341 nmdc:mga08x19_90460_c1
342 nmdc:mga0a205_75684_c1
343 Ga0495601_0002493
344 Ga0495601_0018379
345 Ga0495612_0000270
346 Ga0495619_0003287
347 Ga0500643_002429
348 Ga0500619_000107
349 Ga0501082_0012892
350 2585269772
351 2585391102
352 2765468978
353 2838079104
354 2896385762
355 2904584083
356 2919124982
357 2920766433
358 3005413997

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

7

37

0.95

PF01494

FAD_binding_3

FAD binding domain

2

354

0.88

PF21274

Rng_hyd_C

Aromatic-ring hydroxylase, C-terminal

433

532

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r0g-assembly2.cif.gz_B chromopyrrolic acid-soaked rebc with bound 7-carboxy-k252c 0.939 2 534
6fqz-assembly1.cif.gz_B plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor nadp+ and in complex with its substrate 6-phosphogluconate 0.9383 4 34
4eip-assembly1.cif.gz_A native and k252c bound rebc-10x 0.9377 1 534
3ept-assembly1.cif.gz_A structure of the rebeccamycin biosynthetic enzyme rebc with reduced flavin 0.9359 2 535
3ept-assembly2.cif.gz_B structure of the rebeccamycin biosynthetic enzyme rebc with reduced flavin 0.934 2 535
ID Description Score Start End Superfamily
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9703 6 37 3.50.50.60
af_I1LIA8_18_345_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9661 5 35 3.50.50.60
af_P37127_327_452_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9634 4 35 3.50.50.60
af_Q5AMP2_2_178_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9387 4 32 3.40.50.720
af_O69721_5_180_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9346 4 35 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A292GM42-F1-model_v4 2,4-dichlorophenol 6-monooxygenase 0.9607 2 536 GO:0016709
GO:0071949
AF-A0A6B3BH44-F1-model_v4 2-polyprenyl-6-methoxyphenol hydroxylase 0.9586 4 534 GO:0016709
GO:0071949
AF-A0A7Z3BKR6-F1-model_v4 2-polyprenyl-6-methoxyphenol hydroxylase 0.9567 1 534 GO:0016709
GO:0071949
AF-A0A848WCD1-F1-model_v4 Monooxygenase 0.9539 433 536 GO:0004497
AF-A0A7Z3BKR6-F1-model_v4 2-polyprenyl-6-methoxyphenol hydroxylase 0.9515 1 534 GO:0016709
GO:0071949

Map