F272914

General Info

Members Datasets Scaffolds Average Seq Length
178 153 356 206

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862290372|2862296253
Length 230
Sequence SPVAPTRTVYAAVYEAYADWETGHTTAYLARGGHPVRTVGLTRDPVTSIGGLRITPDLALDELRAEDAALLILAGSDLWDTGDELAPFARKAREFVDAGVPVAAICGATAGLAREGLLDDRKHTSAISYYLAATGYDGGKHYVEADAVTDGGIVTAGPTEPVAFAREVLGLLGVYEGELLDAWYRLFHDSDPSAYETLAAAEAEAEADAEVETGTGTGTEAEAGSEAAAR

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
5 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
6 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
7 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
8 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
9 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
10 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
11 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
12 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
13 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
14 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
15 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
16 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
17 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
18 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
19 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
20 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
21 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
22 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
23 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
24 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
25 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
26 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
27 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
28 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
29 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
30 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
31 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
32 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
33 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
34 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
35 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
36 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
37 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
38 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
39 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
40 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
41 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
42 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
43 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
44 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
45 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
46 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
47 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
48 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
49 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
50 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
51 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
52 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
53 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
54 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
55 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
56 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
57 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
58 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
59 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
60 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
61 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
62 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
63 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
64 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
65 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
66 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
67 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
68 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
69 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
70 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
71 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
72 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
73 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
74 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
75 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
76 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
77 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
78 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
79 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
80 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
81 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
82 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
83 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
96 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
97 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
98 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
99 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
100 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
101 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
102 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
103 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
104 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
105 2643221548 Streptomyces sp. Root55 Isolate Unclassified
106 2643221578 Streptomyces sp. Root63 Isolate Unclassified
107 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
108 2643221647 Streptomyces sp. Root369 Isolate Unclassified
109 2643221670 Streptomyces sp. Root431 Isolate Unclassified
110 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
111 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
112 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
113 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
114 2643221714 Streptomyces sp. Root264 Isolate Unclassified
115 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
116 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
117 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
118 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
119 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
120 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
121 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
122 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
123 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
124 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
125 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
126 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
127 2862574272 Streptomyces sp. AcE210 Isolate Nodule
128 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
129 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
130 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
131 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
132 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
133 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
134 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
135 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
136 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
137 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
138 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
139 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
140 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
141 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
142 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
143 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
144 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
145 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
146 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
147 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
148 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
149 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
150 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
151 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
152 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
153 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 66.85
Metatranscriptomes 1.12
Isolates 32.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.81
Nodule 2.25
Rhizoplane 0
Rhizosphere 75.28
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10143492 3300003320 Bacteria 1107
2 JGI25160J50197_1007684 3300003354 Bacteria 4193
3 JGI25160J50197_1024220 3300003354 Bacteria 1727
4 Ga0006562J51391_1137632 3300003578 Bacteria 9250
5 Ga0006562J51391_1137633 3300003578 Bacteria 2470
6 Ga0068853_100451473 3300005539 Bacteria 1209
7 Ga0081455_10552635 3300005937 Bacteria 761
8 Ga0099826_10174766 3300006948 Bacteria 1202
9 Ga0207426_1003080 3300025302 Bacteria 9554
10 Ga0207426_1006941 3300025302 Bacteria 4813
11 Ga0207639_10602479 3300026041 Bacteria 1013
12 Ga0307515_10219292 3300028794 Bacteria 1725
13 Ga0307512_10006552 3300030522 Bacteria 11768
14 Ga0307512_10079304 3300030522 Bacteria 2372
15 Ga0307408_100677477 3300031548 Bacteria 925
16 Ga0307508_10009161 3300031616 Bacteria 9115
17 Ga0307514_10003943 3300031649 Bacteria 13874
18 Ga0307514_10303939 3300031649 Bacteria 891
19 Ga0307516_10021706 3300031730 Bacteria 6601
20 Ga0307410_10102706 3300031852 Bacteria 2052
21 Ga0307416_100161922 3300032002 Bacteria 2069
22 Ga0307510_10048767 3300033180 Bacteria 4514
23 Ga0395898_0024347 3300037466 Bacteria 6105
24 Ga0439436_0005478 3300041404 Bacteria 3887
25 Ga0439436_0007085 3300041404 Bacteria 3451
26 Ga0439439_0007234 3300041406 Bacteria 2591
27 Ga0451841_1308967 3300041498 Bacteria 1317
28 Ga0451853_0246657 3300041512 Bacteria 3758
29 Ga0439442_041392 3300042002 Bacteria 968
30 Ga0439448_0014090 3300042005 Bacteria 2409
31 Ga0439449_0088548 3300042007 Bacteria 1142
32 Ga0439455_0001381 3300042012 Bacteria 4033
33 Ga0439457_000034 3300042014 Bacteria 28537
34 Ga0439457_001237 3300042014 Bacteria 7675
35 Ga0439462_0002355 3300042015 Bacteria 4379
36 Ga0450894_001199 3300042131 Bacteria 3841
37 Ga0450896_000743 3300042133 Bacteria 3646
38 Ga0450898_000312 3300042134 Bacteria 5443
39 Ga0450903_008952 3300042138 Bacteria 1635
40 Ga0450906_002618 3300042145 Bacteria 3927
41 Ga0439458_0036157 3300042157 Bacteria 1188
42 Ga0466972_0001621 3300044658 Bacteria 10986
43 Ga0466965_0028065 3300044683 Bacteria 2733
44 Ga0466963_0048306 3300044694 Bacteria 2811
45 Ga0466967_0006623 3300045976 Bacteria 8234
46 Ga0495592_0099624 3300046454 Bacteria 2072
47 Ga0495603_0137465 3300046455 Bacteria 1422
48 Ga0495603_0234995 3300046455 Bacteria 1056
49 Ga0495629_0556511 3300046459 Bacteria 769
50 Ga0495638_0389273 3300046460 Bacteria 726
51 Ga0495651_0037915 3300046462 Bacteria 3753
52 Ga0495580_0034838 3300046472 Bacteria 3622
53 Ga0495605_0040938 3300046474 Bacteria 2310
54 Ga0495662_0104434 3300046476 Bacteria 1386
55 Ga0495662_0263564 3300046476 Bacteria 848
56 Ga0495583_0019320 3300046506 Bacteria 3560
57 Ga0495583_0136180 3300046506 Bacteria 1025
58 Ga0495608_0254881 3300046511 Bacteria 1093
59 Ga0495616_0060291 3300046513 Bacteria 1864
60 Ga0495618_0279499 3300046514 Bacteria 1041
61 Ga0495618_0290350 3300046514 Bacteria 1018
62 Ga0495620_0014867 3300046515 Bacteria 3945
63 Ga0495628_0029160 3300046516 Bacteria 4477
64 Ga0495628_0195174 3300046516 Bacteria 1527
65 Ga0495643_0123344 3300046522 Bacteria 1307
66 Ga0495648_0089199 3300046524 Bacteria 1731
67 Ga0495642_0187575 3300046528 Bacteria 901
68 Ga0495640_0012338 3300046533 Bacteria 6532
69 Ga0495597_0040718 3300046542 Bacteria 2077
70 Ga0495668_0035978 3300046616 Bacteria 2775
71 Ga0495634_0045135 3300046642 Bacteria 2980
72 Ga0495611_0035098 3300046648 Bacteria 2220
73 Ga0495625_0032369 3300046660 Bacteria 3878
74 Ga0495625_0178836 3300046660 Bacteria 1412
75 Ga0495635_0041974 3300046663 Bacteria 3160
76 Ga0495657_0073870 3300046675 Bacteria 2219
77 Ga0495657_0093274 3300046675 Bacteria 1927
78 Ga0495613_0018681 3300046689 Bacteria 5169
79 Ga0495613_0024895 3300046689 Bacteria 4459
80 Ga0495613_0132230 3300046689 Bacteria 1786
81 Ga0495613_0190339 3300046689 Bacteria 1450
82 Ga0495624_0199926 3300046690 Bacteria 1214
83 Ga0495649_0052764 3300046694 Bacteria 2202
84 Ga0495589_0009234 3300046794 Bacteria 5129
85 Ga0495589_0067177 3300046794 Bacteria 1755
86 Ga0495589_0096230 3300046794 Bacteria 1435
87 Ga0495589_0220018 3300046794 Bacteria 892
88 Ga0495600_0366652 3300046809 Bacteria 900
89 Ga0495660_0043944 3300046810 Bacteria 2460
90 Ga0495581_0220285 3300047315 Bacteria 1109
91 Ga0495604_0034137 3300047317 Bacteria 4026
92 Ga0495636_0002061 3300047318 Bacteria 7715
93 Ga0495636_0030809 3300047318 Bacteria 2195
94 Ga0495636_0109205 3300047318 Bacteria 1216
95 Ga0495676_0032085 3300047321 Bacteria 4437
96 Ga0495676_0119247 3300047321 Bacteria 1922
97 Ga0495680_0027994 3300047322 Bacteria 4624
98 Ga0495683_0058223 3300047323 Bacteria 1919
99 Ga0495687_009633 3300047443 Bacteria 5380
100 Ga0495677_0023255 3300047445 Bacteria 2250
101 Ga0495685_000843 3300047447 Bacteria 9336
102 Ga0495685_010425 3300047447 Bacteria 3116
103 Ga0495685_023887 3300047447 Bacteria 2104
104 Ga0495684_0052997 3300047471 Bacteria 3096
105 Ga0495593_0100379 3300047673 Bacteria 1484
106 Ga0495614_0058537 3300048089 Bacteria 1654
107 Ga0495626_0028390 3300048091 Bacteria 2714
108 Ga0501031_0114643 3300049568 Bacteria 1760
109 Ga0501032_0120018 3300049569 Bacteria 1738
110 Ga0501034_0014851 3300049571 Bacteria 8012
111 Ga0501036_0280671 3300049572 Bacteria 1394
112 Ga0501037_0073671 3300049573 Bacteria 2483
113 Ga0501038_0000928 3300049574 Bacteria 26058
114 Ga0501039_0126498 3300049575 Bacteria 2005
115 Ga0501043_0131363 3300049579 Bacteria 1962
116 Ga0501070_0246426 3300049586 Bacteria 1462
117 Ga0501080_0265360 3300049742 Bacteria 1563
118 Ga0501035_0042378 3300049822 Bacteria 4105
119 Ga0501044_0249009 3300049823 Bacteria 1718
120 Ga0500600_0256702 3300053149 Bacteria 779
121 Ga0466962_0086972 3300061719 Bacteria 1497
122 2862296253 2862290372 Bacteria 7471434
123 2547406373 2547132111 Bacteria 8013147
124 2554257174 2554235005 Bacteria 6457341
125 2585297910 2582581312 Bacteria 7308206
126 2585305371 2582581313 Bacteria 10042643
127 2585312892 2582581314 Bacteria 11452267
128 2616702338 2616644814 Bacteria 11555299
129 2616904509 2616644941 Bacteria 8510691
130 2643763380 2643221548 Bacteria 8053412
131 2643900570 2643221578 Bacteria 9213798
132 2643947513 2643221587 Bacteria 7586415
133 2644266091 2643221647 Bacteria 10741251
134 2644390362 2643221670 Bacteria 6497041
135 2644405209 2643221673 Bacteria 9196637
136 2644435205 2643221677 Bacteria 7584031
137 2644437443 2643221678 Bacteria 9540101
138 2644463750 2643221682 Bacteria 6743283
139 2644628155 2643221714 Bacteria 9015452
140 2676490355 2675903060 Bacteria 10051191
141 2785342336 2784746763 Bacteria 9783172
142 2785370342 2784746768 Bacteria 10036182
143 2786671450 2786546132 Bacteria 10419719
144 2808842865 2808606359 Bacteria 9866990
145 2808921263 2808606375 Bacteria 9466072
146 2811845477 2808606982 Bacteria 7791042
147 2812357210 2811994879 Bacteria 9313447
148 2812479876 2811994917 Bacteria 7761064
149 2819698129 2818991463 Bacteria 7948711
150 2852639897 2852635781 Bacteria 8251373
151 2862385210 2862382967 Bacteria 10317375
152 2862578601 2862574272 Bacteria 10567477
153 2873155132 2873151551 Bacteria 8625867
154 2875394825 2875391855 Bacteria 7600475
155 2877680282 2877676314 Bacteria 9512378
156 2895431964 2895427314 Bacteria 13147766
157 2912718925 2912715099 Bacteria 9460473
158 2912761716 2912757875 Bacteria 7940295
159 2918504793 2918501144 Bacteria 8668083
160 2919471304 2919468124 Bacteria 9133025
161 2946049121 2946045630 Bacteria 8527308
162 2946076657 2946072368 Bacteria 8999607
163 2947228237 2947224130 Bacteria 9938529
164 2954385319 2954380949 Bacteria 10050426
165 2954677773 2954673503 Bacteria 9685905
166 2954686381 2954682443 Bacteria 9862841
167 2954696054 2954691527 Bacteria 10720516
168 2954711227 2954701450 Bacteria 10834262
169 2954725380 2954721474 Bacteria 10456478
170 2954736415 2954731030 Bacteria 10243860
171 2954744316 2954740390 Bacteria 10229294
172 2954763288 2954759201 Bacteria 9358192
173 2966602362 2966598605 Bacteria 7676064
174 3006491645 3006486233 Bacteria 8157040
175 3006500238 3006493962 Bacteria 8825450
176 8008566029 8008558824 Bacteria 10610750
177 8025538292 8025530807 Bacteria 8495698
178 8056064100 8056060235 Bacteria 7259403
179 rootH2_10143492
180 JGI25160J50197_1007684
181 JGI25160J50197_1024220
182 Ga0006562J51391_1137632
183 Ga0006562J51391_1137633
184 Ga0068853_100451473
185 Ga0081455_10552635
186 Ga0099826_10174766
187 Ga0207426_1003080
188 Ga0207426_1006941
189 Ga0207639_10602479
190 Ga0307515_10219292
191 Ga0307512_10006552
192 Ga0307512_10079304
193 Ga0307408_100677477
194 Ga0307508_10009161
195 Ga0307514_10003943
196 Ga0307514_10303939
197 Ga0307516_10021706
198 Ga0307410_10102706
199 Ga0307416_100161922
200 Ga0307510_10048767
201 Ga0395898_0024347
202 Ga0439436_0005478
203 Ga0439436_0007085
204 Ga0439439_0007234
205 Ga0451841_1308967
206 Ga0451853_0246657
207 Ga0439442_041392
208 Ga0439448_0014090
209 Ga0439449_0088548
210 Ga0439455_0001381
211 Ga0439457_000034
212 Ga0439457_001237
213 Ga0439462_0002355
214 Ga0450894_001199
215 Ga0450896_000743
216 Ga0450898_000312
217 Ga0450903_008952
218 Ga0450906_002618
219 Ga0439458_0036157
220 Ga0466972_0001621
221 Ga0466965_0028065
222 Ga0466963_0048306
223 Ga0466967_0006623
224 Ga0495592_0099624
225 Ga0495603_0137465
226 Ga0495603_0234995
227 Ga0495629_0556511
228 Ga0495638_0389273
229 Ga0495651_0037915
230 Ga0495580_0034838
231 Ga0495605_0040938
232 Ga0495662_0104434
233 Ga0495662_0263564
234 Ga0495583_0019320
235 Ga0495583_0136180
236 Ga0495608_0254881
237 Ga0495616_0060291
238 Ga0495618_0279499
239 Ga0495618_0290350
240 Ga0495620_0014867
241 Ga0495628_0029160
242 Ga0495628_0195174
243 Ga0495643_0123344
244 Ga0495648_0089199
245 Ga0495642_0187575
246 Ga0495640_0012338
247 Ga0495597_0040718
248 Ga0495668_0035978
249 Ga0495634_0045135
250 Ga0495611_0035098
251 Ga0495625_0032369
252 Ga0495625_0178836
253 Ga0495635_0041974
254 Ga0495657_0073870
255 Ga0495657_0093274
256 Ga0495613_0018681
257 Ga0495613_0024895
258 Ga0495613_0132230
259 Ga0495613_0190339
260 Ga0495624_0199926
261 Ga0495649_0052764
262 Ga0495589_0009234
263 Ga0495589_0067177
264 Ga0495589_0096230
265 Ga0495589_0220018
266 Ga0495600_0366652
267 Ga0495660_0043944
268 Ga0495581_0220285
269 Ga0495604_0034137
270 Ga0495636_0002061
271 Ga0495636_0030809
272 Ga0495636_0109205
273 Ga0495676_0032085
274 Ga0495676_0119247
275 Ga0495680_0027994
276 Ga0495683_0058223
277 Ga0495687_009633
278 Ga0495677_0023255
279 Ga0495685_000843
280 Ga0495685_010425
281 Ga0495685_023887
282 Ga0495684_0052997
283 Ga0495593_0100379
284 Ga0495614_0058537
285 Ga0495626_0028390
286 Ga0501031_0114643
287 Ga0501032_0120018
288 Ga0501034_0014851
289 Ga0501036_0280671
290 Ga0501037_0073671
291 Ga0501038_0000928
292 Ga0501039_0126498
293 Ga0501043_0131363
294 Ga0501070_0246426
295 Ga0501080_0265360
296 Ga0501035_0042378
297 Ga0501044_0249009
298 Ga0500600_0256702
299 Ga0466962_0086972
300 2862296253
301 2547406373
302 2554257174
303 2585297910
304 2585305371
305 2585312892
306 2616702338
307 2616904509
308 2643763380
309 2643900570
310 2643947513
311 2644266091
312 2644390362
313 2644405209
314 2644435205
315 2644437443
316 2644463750
317 2644628155
318 2676490355
319 2785342336
320 2785370342
321 2786671450
322 2808842865
323 2808921263
324 2811845477
325 2812357210
326 2812479876
327 2819698129
328 2852639897
329 2862385210
330 2862578601
331 2873155132
332 2875394825
333 2877680282
334 2895431964
335 2912718925
336 2912761716
337 2918504793
338 2919471304
339 2946049121
340 2946076657
341 2947228237
342 2954385319
343 2954677773
344 2954686381
345 2954696054
346 2954711227
347 2954725380
348 2954736415
349 2954744316
350 2954763288
351 2966602362
352 3006491645
353 3006500238
354 8008566029
355 8025538292
356 8056064100

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01965

DJ-1_PfpI

DJ-1/PfpI family

7

171

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3efe-assembly2.cif.gz_C the crystal structure of the thij/pfpi family protein from bacillus anthracis 0.9072 9 210
3efe-assembly2.cif.gz_C the crystal structure of the thij/pfpi family protein from bacillus anthracis 0.8866 9 210
2fex-assembly2.cif.gz_C-2 the crystal structure of dj-1 superfamily protein atu0886 from agrobacterium tumefaciens 0.8818 9 198
2fex-assembly2.cif.gz_C-2 the crystal structure of dj-1 superfamily protein atu0886 from agrobacterium tumefaciens 0.8644 9 198
6f2f-assembly1.cif.gz_A crystal structure of protease 1 from pyrococcus horikoshii co-cystallized in presence of 10 mm tb-xo4 and ammonium sulfate. 0.8382 10 180
ID Description Score Start End Superfamily
3efeC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9072 9 210 3.40.50.880
3efeC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8866 9 210 3.40.50.880
2fexA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8771 10 198 3.40.50.880
2fexA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8595 10 198 3.40.50.880
6f2fA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.8382 10 180 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A5P9BG86-F1-model_v4 Putative protease YdeA (EC 3.2.-.-) 0.9651 9 210 GO:0006508
GO:0008233
GO:0016798
AF-A0A7X6D5N1-F1-model_v4 Glutamine amidotransferase 0.9622 8 211 GO:0016740
AF-A0A846XCE9-F1-model_v4 Glutamine amidotransferase 0.9611 7 212 GO:0005737
GO:0016740
AF-A0A0U3F7J1-F1-model_v4 Thiamine biosynthesis protein ThiJ 0.9581 8 209 GO:0005737
AF-V8CXJ5-F1-model_v4 Thiazole biosynthesis protein ThiJ 0.958 49 208 GO:0016020

Map