F272905

General Info

Members Datasets Scaffolds Average Seq Length
178 154 356 638

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2823526263|2823529068
Length 651
Sequence QLVFRNLKKNLKNYYLYVFALVFSVALYFSFVTLQYSPALDDVKGSIKGGASIKAASVLLIAIVGIFLLYANSIFIKRRGREIGLLQLIGMTKQKISKLLNAENFILYVVSMAIGIIAGFIGSKLMLMVLFKVTGVNAIANLHFSGMALLQTLIVFFVIYGLIMLRNRWFINRQTILSLFRTTSSTEQRVKKISVFEIIIGVLGIAFISSGYYISSKLFTGTYTSMLALLLAMIYILASVIIGTFLFYKGSVSFIANIVRKRKNGYLAIHEVLSLSSIMFRLKSNALLLTIITTVSALAIGLLSLSYISYYSAEKTAEQQIPSHFVMGSEKEANTFTRALSDKHIAYDLKQVKVIRAKFDAKKLMDMDAELKNMNNEPGILTLPVISEKNAPNIHVGNNEVILSGYSDQLKKFMPIKSSGDVKLLIKKPLDLKVLDLKKDYLISYNFTFGGLPVAVVSQDVFEQLDQQKDPKLQLDQQKYLQFENSLYIAVNIKDKKNLEKANNVFNSLKLGENSMSQLASAQQQKQTIGLMMFIVGFLGLSFLVTSGCILYFKQMNESEEEQSSYTILRKLGFTEKDLLKGIRLKQLFNFGIPLVVGLLHSYFAVQSGWFFFGGELWTPMLIVMSIYTVLYSIFGFLSVQYYKKVIKESL

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
4 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
5 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
6 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
7 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
8 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
9 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
10 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
11 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
12 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
13 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
14 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
15 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
19 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
20 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
21 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
22 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
23 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
24 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
25 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
26 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
27 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
28 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
29 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
30 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
31 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
32 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
33 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
34 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
35 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
36 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
37 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
38 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
39 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
40 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
41 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
42 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
43 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
44 2554235283 Bacillus safensis VK Isolate Rhizosphere
45 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
46 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
47 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
48 2599185353 Staphylococcus sp. NFPP34 Isolate Rhizoplane
49 2600254943 Staphylococcus pasteuri NFIX07 Isolate Rhizoplane
50 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
51 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
52 2643221731 Bacillus sp. Root147 Isolate Unclassified
53 2643221732 Bacillus sp. Root239 Isolate Unclassified
54 2643221735 Bacillus sp. Root920 Isolate Unclassified
55 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
56 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
57 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
58 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
59 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
60 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
61 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
62 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
63 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
64 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
65 2738541295 Bacillus sp. OK085 Isolate Unclassified
66 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
67 2738543017 Bacillus sp. OV186 Isolate Unclassified
68 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
69 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
70 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
71 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
72 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
73 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
74 2811994870 Bacillus sp. JB4 Isolate Unclassified
75 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
76 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
77 2818991441 Niallia circulans 3243 Isolate Rhizosphere
78 2818991459 Paenibacillus sp. 597 Isolate Unclassified
79 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
80 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
81 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
82 2842682962 Bacillus sp. R-72492 Isolate Unclassified
83 2842882022 Bacillus sp. R-71893 Isolate Unclassified
84 2849139964 Bacillus sp. R-71875 Isolate Unclassified
85 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
86 2857581216 Bacillus sp. R-71922 Isolate Unclassified
87 2857586860 Bacillus sp. R-71935 Isolate Unclassified
88 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
89 2860837431 Bacillus sp. WR11 Isolate Unclassified
90 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
91 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
92 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
93 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
94 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
95 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
96 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
97 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
98 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
99 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
100 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
101 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
102 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
103 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
104 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
105 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
106 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
107 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
108 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
109 2919720352 Priestia megaterium 4340 Isolate Unclassified
110 2919726948 Bacillus pumilus 4489 Isolate Unclassified
111 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
112 2929004312 Priestia megaterium 1104 Isolate Unclassified
113 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
114 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
115 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
116 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
117 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
118 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
119 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
120 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
121 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
122 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
123 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
124 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
125 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
126 2969141011 Bacillus velezensis MH25 Isolate Unclassified
127 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
128 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
129 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
130 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
131 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
132 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
133 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
134 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
135 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
136 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
137 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
138 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
139 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
140 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
141 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
142 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
143 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
144 8022653035 Bacillus sp. Rc4 Isolate Unclassified
145 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
146 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
147 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
148 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
149 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
150 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
151 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
152 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
153 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
154 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 33.71
Metatranscriptomes 0.56
Isolates 65.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.11
Nodule 0.56
Rhizoplane 7.87
Rhizosphere 41.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000046 3300003187 Bacteria 168647
2 JGI25151J46595_10001644 3300003187 Bacteria 14698
3 JGI25151J46595_10002503 3300003187 Bacteria 10960
4 JGI25151J46595_10003096 3300003187 Bacteria 9372
5 JGI25151J46595_10010210 3300003187 Bacteria 4378
6 Ga0006562J51391_1002639 3300003578 Bacteria 4070
7 Ga0055538_1000189 3300003751 Bacteria 37630
8 Ga0055532_1000121 3300003758 Bacteria 80171
9 Ga0105251_10033990 3300009011 Bacteria 2527
10 Ga0105244_10018839 3300009036 Bacteria 3865
11 Ga0105244_10024856 3300009036 Bacteria 3263
12 Ga0105244_10027650 3300009036 Bacteria 3054
13 Ga0105250_10009595 3300009092 Bacteria 4071
14 Ga0105250_10031113 3300009092 Bacteria 2143
15 Ga0105246_10105509 3300011119 Bacteria 2060
16 Ga0209784_100198 3300025224 Bacteria 43159
17 Ga0209147_100062 3300025229 Bacteria 242831
18 Ga0209147_101090 3300025229 Bacteria 11375
19 Ga0209437_101005 3300025233 Bacteria 9800
20 Ga0209673_1014169 3300025273 Bacteria 3098
21 Ga0209676_1002524 3300025292 Bacteria 12769
22 Ga0209025_1000001 3300025294 Bacteria 1888151
23 Ga0209025_1000287 3300025294 Bacteria 113923
24 Ga0209025_1002175 3300025294 Bacteria 21791
25 Ga0209025_1002323 3300025294 Bacteria 20551
26 Ga0209025_1009313 3300025294 Bacteria 6872
27 Ga0207696_1007419 3300025711 Bacteria 4296
28 Ga0207696_1010260 3300025711 Bacteria 3446
29 Ga0207655_1008152 3300025728 Bacteria 6696
30 Ga0207655_1011500 3300025728 Bacteria 5262
31 Ga0207713_1027867 3300025735 Bacteria 2557
32 Ga0209371_1004583 3300027312 Bacteria 5917
33 Ga0268256_1003093 3300030500 Bacteria 7781
34 Ga0495660_0018264 3300046810 Bacteria 4030
35 Ga0495660_0021742 3300046810 Bacteria 3669
36 Ga0496101_0009437 3300048904 Bacteria 6413
37 Ga0496102_0169197 3300048905 Bacteria 2057
38 Ga0496104_0007340 3300048907 Bacteria 9732
39 Ga0496105_0031731 3300048908 Bacteria 4332
40 Ga0496107_0007172 3300048910 Bacteria 7680
41 Ga0496109_0015576 3300048912 Bacteria 6630
42 Ga0496110_0000447 3300048913 Bacteria 28092
43 Ga0496110_0051970 3300048913 Bacteria 3601
44 Ga0496111_0007350 3300048914 Bacteria 7211
45 Ga0496111_0070907 3300048914 Bacteria 2535
46 Ga0496112_0041143 3300048915 Bacteria 4520
47 Ga0496116_0016810 3300048919 Bacteria 5708
48 Ga0496116_0016868 3300048919 Bacteria 5695
49 Ga0496117_0047540 3300048920 Bacteria 3075
50 Ga0496119_0031606 3300048922 Bacteria 3545
51 Ga0496119_0046012 3300048922 Bacteria 2730
52 Ga0496120_0001344 3300048923 Bacteria 30284
53 Ga0496120_0008276 3300048923 Bacteria 7590
54 Ga0496121_0008191 3300048924 Bacteria 12405
55 Ga0496122_0010420 3300048925 Bacteria 9589
56 Ga0496122_0015132 3300048925 Bacteria 7395
57 Ga0496124_0000924 3300048927 Bacteria 47434
58 Ga0496125_0003247 3300048928 Bacteria 20031
59 Ga0496125_0024087 3300048928 Bacteria 5605
60 Ga0496126_0001573 3300048929 Bacteria 34950
61 Ga0496126_0032988 3300048929 Bacteria 4874
62 2823529068 2823526263 Bacteria 3765752
63 2511700696 2511231119 Bacteria 4019861
64 2540607920 2540341094 Bacteria 4061186
65 2545557394 2545555800 Bacteria 4222588
66 2550902796 2548877040 Bacteria 7507281
67 2555469902 2554235283 Bacteria 3683090
68 2571532028 2571042143 Bacteria 6986194
69 2578931660 2576861599 Bacteria 4217202
70 2595091891 2593339131 Bacteria 5116855
71 2600199184 2599185353 Bacteria 2219443
72 2600401745 2600254943 Bacteria 2613887
73 2631983575 2630968484 Bacteria 3876276
74 2643739289 2643221543 Bacteria 6628015
75 2644716948 2643221731 Bacteria 5623886
76 2644725769 2643221732 Bacteria 5756404
77 2644741491 2643221735 Bacteria 3676263
78 2651532586 2648501850 Bacteria 3975476
79 2672337462 2671180330 Bacteria 5521719
80 2674418482 2671180844 Bacteria 4164150
81 2686997914 2684623153 Bacteria 3878815
82 2687499254 2687453109 Bacteria 3860091
83 2695628686 2695420354 Bacteria 3922431
84 2717915617 2716884898 Bacteria 3928789
85 2723606757 2721755693 Bacteria 6126117
86 2728530800 2728368933 Bacteria 7044283
87 2730137338 2728369359 Bacteria 5621728
88 2738816536 2738541295 Bacteria 5730091
89 2738840544 2738541299 Bacteria 4020721
90 2739269348 2738543017 Bacteria 4271950
91 2757566938 2757320391 Bacteria 4746095
92 2777760841 2775507177 Bacteria 4384303
93 2777836609 2775507192 Bacteria 4622234
94 2802437578 2802428803 Bacteria 5806948
95 2808867594 2808606364 Bacteria 4465927
96 2808870841 2808606364 Bacteria 4465927
97 2809056286 2808606399 Bacteria 4021018
98 2812317108 2811994870 Bacteria 3776934
99 2816862128 2816332186 Bacteria 5331395
100 2817482270 2816332295 Bacteria 4352468
101 2819566857 2818991441 Bacteria 5062707
102 2819675852 2818991459 Bacteria 8736032
103 2819710393 2818991465 Bacteria 5388835
104 2819724188 2818991468 Bacteria 3723169
105 2821114166 2821111986 Bacteria 6894338
106 2842684961 2842682962 Bacteria 5589973
107 2842886835 2842882022 Bacteria 6158489
108 2849141520 2849139964 Bacteria 5613304
109 2857457904 2857453340 Bacteria 8090534
110 2857584042 2857581216 Bacteria 5522813
111 2857589031 2857586860 Bacteria 4354574
112 2857606073 2857604169 Bacteria 5111450
113 2860840699 2860837431 Bacteria 4202080
114 2877771610 2877768649 Bacteria 3957164
115 2880172456 2880169592 Bacteria 3900066
116 2881649667 2881644220 Bacteria 5302661
117 2885530523 2885526491 Bacteria 7164189
118 2889044225 2889042446 Bacteria 7618936
119 2889277306 2889276214 Bacteria 5979355
120 2897112730 2897109615 Bacteria 4009619
121 2904166071 2904162308 Bacteria 7086713
122 2904491115 2904490793 Bacteria 7046938
123 2904525725 2904524088 Bacteria 5887454
124 2904564057 2904560550 Bacteria 4029838
125 2904595982 2904595352 Bacteria 6124848
126 2904761459 2904755435 Bacteria 7986759
127 2908667720 2908665501 Bacteria 3678115
128 2919095514 2919093281 Bacteria 3660974
129 2919145680 2919143609 Bacteria 6219228
130 2919160363 2919160200 Bacteria 6929020
131 2919432229 2919425241 Bacteria 8055701
132 2919517621 2919517244 Bacteria 5858162
133 2919721995 2919720352 Bacteria 5986006
134 2919728776 2919726948 Bacteria 3696050
135 2928094241 2928093941 Bacteria 5965005
136 2929007217 2929004312 Bacteria 5678476
137 2931387660 2931384279 Bacteria 7299545
138 2936344424 2936340661 Bacteria 5139038
139 2936364056 2936361878 Bacteria 5632809
140 2938652334 2938649242 Bacteria 7118381
141 2939703283 2939702853 Bacteria 5139229
142 2945993752 2945991243 Bacteria 7008369
143 2946056486 2946053406 Bacteria 6978655
144 2954773386 2954773129 Bacteria 3741715
145 2960321027 2960319331 Bacteria 5502575
146 2960380133 2960375949 Bacteria 5361395
147 2962293918 2962290636 Bacteria 4072939
148 2968559488 2968558590 Bacteria 6956864
149 2969139904 2969136845 Bacteria 3923176
150 2969144053 2969141011 Bacteria 4118468
151 2969769627 2969765954 Bacteria 4216713
152 2969772691 2969770375 Bacteria 4271280
153 2971409150 2971403814 Bacteria 7370929
154 2971412907 2971410472 Bacteria 8311090
155 2971896278 2971893375 Bacteria 3929648
156 2977255731 2977254563 Bacteria 4828420
157 2980495693 2980492589 Bacteria 4072961
158 2988229993 2988225383 Bacteria 7221625
159 2990276539 2990275345 Bacteria 4887158
160 2996638429 2996632988 Bacteria 6921523
161 2996707931 2996706504 Bacteria 5757485
162 3001898444 3001892409 Bacteria 6328293
163 3006831667 3006826541 Bacteria 4678913
164 3006862704 3006858327 Bacteria 4317835
165 3006882127 3006879489 Bacteria 4064221
166 648172712 648028048 Bacteria 5394884
167 8022632337 8022630665 Bacteria 3886130
168 8022654859 8022653035 Bacteria 4035078
169 8022898742 8022893055 Bacteria 5300455
170 8022920652 8022914991 Bacteria 5584517
171 8051954771 8051952484 Bacteria 3926774
172 8052176522 8052174270 Bacteria 3881265
173 8054284541 8054280661 Bacteria 4232245
174 8054469268 8054465665 Bacteria 7323556
175 8054803313 8054795415 Bacteria 9785225
176 8056534404 8056533031 Bacteria 8964429
177 8057476492 8057473075 Bacteria 5892720
178 8057636827 8057632132 Bacteria 4726859
179 JGI25151J46595_10000046
180 JGI25151J46595_10001644
181 JGI25151J46595_10002503
182 JGI25151J46595_10003096
183 JGI25151J46595_10010210
184 Ga0006562J51391_1002639
185 Ga0055538_1000189
186 Ga0055532_1000121
187 Ga0105251_10033990
188 Ga0105244_10018839
189 Ga0105244_10024856
190 Ga0105244_10027650
191 Ga0105250_10009595
192 Ga0105250_10031113
193 Ga0105246_10105509
194 Ga0209784_100198
195 Ga0209147_100062
196 Ga0209147_101090
197 Ga0209437_101005
198 Ga0209673_1014169
199 Ga0209676_1002524
200 Ga0209025_1000001
201 Ga0209025_1000287
202 Ga0209025_1002175
203 Ga0209025_1002323
204 Ga0209025_1009313
205 Ga0207696_1007419
206 Ga0207696_1010260
207 Ga0207655_1008152
208 Ga0207655_1011500
209 Ga0207713_1027867
210 Ga0209371_1004583
211 Ga0268256_1003093
212 Ga0495660_0018264
213 Ga0495660_0021742
214 Ga0496101_0009437
215 Ga0496102_0169197
216 Ga0496104_0007340
217 Ga0496105_0031731
218 Ga0496107_0007172
219 Ga0496109_0015576
220 Ga0496110_0000447
221 Ga0496110_0051970
222 Ga0496111_0007350
223 Ga0496111_0070907
224 Ga0496112_0041143
225 Ga0496116_0016810
226 Ga0496116_0016868
227 Ga0496117_0047540
228 Ga0496119_0031606
229 Ga0496119_0046012
230 Ga0496120_0001344
231 Ga0496120_0008276
232 Ga0496121_0008191
233 Ga0496122_0010420
234 Ga0496122_0015132
235 Ga0496124_0000924
236 Ga0496125_0003247
237 Ga0496125_0024087
238 Ga0496126_0001573
239 Ga0496126_0032988
240 2823529068
241 2511700696
242 2540607920
243 2545557394
244 2550902796
245 2555469902
246 2571532028
247 2578931660
248 2595091891
249 2600199184
250 2600401745
251 2631983575
252 2643739289
253 2644716948
254 2644725769
255 2644741491
256 2651532586
257 2672337462
258 2674418482
259 2686997914
260 2687499254
261 2695628686
262 2717915617
263 2723606757
264 2728530800
265 2730137338
266 2738816536
267 2738840544
268 2739269348
269 2757566938
270 2777760841
271 2777836609
272 2802437578
273 2808867594
274 2808870841
275 2809056286
276 2812317108
277 2816862128
278 2817482270
279 2819566857
280 2819675852
281 2819710393
282 2819724188
283 2821114166
284 2842684961
285 2842886835
286 2849141520
287 2857457904
288 2857584042
289 2857589031
290 2857606073
291 2860840699
292 2877771610
293 2880172456
294 2881649667
295 2885530523
296 2889044225
297 2889277306
298 2897112730
299 2904166071
300 2904491115
301 2904525725
302 2904564057
303 2904595982
304 2904761459
305 2908667720
306 2919095514
307 2919145680
308 2919160363
309 2919432229
310 2919517621
311 2919721995
312 2919728776
313 2928094241
314 2929007217
315 2931387660
316 2936344424
317 2936364056
318 2938652334
319 2939703283
320 2945993752
321 2946056486
322 2954773386
323 2960321027
324 2960380133
325 2962293918
326 2968559488
327 2969139904
328 2969144053
329 2969769627
330 2969772691
331 2971409150
332 2971412907
333 2971896278
334 2977255731
335 2980495693
336 2988229993
337 2990276539
338 2996638429
339 2996707931
340 3001898444
341 3006831667
342 3006862704
343 3006882127
344 648172712
345 8022632337
346 8022654859
347 8022898742
348 8022920652
349 8051954771
350 8052176522
351 8054284541
352 8054469268
353 8054803313
354 8056534404
355 8057476492
356 8057636827

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

54

176

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g4c-assembly1.cif.gz_A bceabs atpgs high res tm 0.8943 1 622
8g4c-assembly1.cif.gz_A bceabs atpgs high res tm 0.893 1 622
8g3f-assembly1.cif.gz_A bceab-s nucleotide free bces state 1 0.8765 1 622
8g3f-assembly1.cif.gz_A bceab-s nucleotide free bces state 1 0.8752 1 622
7tcg-assembly1.cif.gz_A bceab nucleotide-free conformation 0.8673 2 622
ID Description Score Start End Superfamily
af_A8JV32_271_458_1.10.357.20 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;SLC41 divalent cation transporters, integral membrane domain 0.3494 187 302 1.10.357.20
af_O18070_42_323_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2678 461 620 1.20.1070.10
af_O76702_16_283_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2676 19 298 1.20.1070.10
af_O45174_35_354_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2675 13 294 1.20.1070.10
af_O16268_11_348_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2626 10 292 1.20.1070.10
ID Description Score Start End GO Terms
AF-G7WJ55-F1-model_v4 ABC-type antimicrobial peptide transport system, permease component 0.8916 1 173 GO:0005886
AF-A0A3D9UTH5-F1-model_v4 FtsX-like permease family protein 0.8909 5 180 GO:0005886
AF-A0A0S2SAU0-F1-model_v4 ABC3 transporter permease C-terminal domain-containing protein 0.883 1 200 GO:0005886
AF-G7WJ55-F1-model_v4 ABC-type antimicrobial peptide transport system, permease component 0.882 1 173 GO:0005886
AF-A0A3D9UTH5-F1-model_v4 FtsX-like permease family protein 0.8636 5 180 GO:0005886

Map