F272898
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 178 | 151 | 150 | 462 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2751185725|2753037364 |
| Length | 480 |
| Sequence | TRKWIEGVTVYRHTLAGTTYAFDGLVELLAKATPRRSGDELAGCAAESDTERAAAQWALADVPLTVFLSEAVVPYESDEVTRLIMDSHDSEAFSPVSSMTVGGLRDWLLEVAARPSDVAAATFRNVAPGLTPEMVAAVSKLMRNQDLIAVAKAVSVVTAFRTTIGLPGRLATRLQPNHPTDDPTGIAAATLDGLLLGCGDAVIGINPATDSPHATSELLLLLDDIRRRFEIPVQSCVLSHVTTTIGLVEAGAPVDLVFQSIAGTEGANKGFGVDLALLREGNEAGRSLSRGTVGDNVMYLETGQGSALSAGAHLGTGGRPVDQQTLETRAYAVARELEPLLINTVVGFIGPEYLYDGKQIVRAGLEDHFCGKLLGLPMGVDVCYTNHAEADQDDMDDLLTLLGVAGVPFVITVPGADDVMLGYQSLSFHDALYARRTLGLKPAPEFEAWLDRVGMLGADGRVLDLAPESSPLHSLTGPVG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2510065045 | Paraburkholderia sprentiae WSM5005 | Isolate | Nodule |
| 2 | 2515154123 | Trinickia symbiotica JPY347 | Isolate | Nodule |
| 3 | 2523231044 | Gordonia rhizosphera NBRC 16068 | Isolate | Rhizosphere |
| 4 | 2643221715 | Mycobacterium sp. Root265 | Isolate | Unclassified |
| 5 | 2718217991 | Paraburkholderia sprentiae WSM5005 | Isolate | Nodule |
| 6 | 2738543011 | Rhodococcus sp. OK611 | Isolate | Unclassified |
| 7 | 2744054611 | Aldersonia kunmingensis DSM 45001 | Isolate | Rhizosphere |
| 8 | 2751185725 | Microbispora sp. NRRL B-24597 | Isolate | Unclassified |
| 9 | 2751185792 | Kitasatospora arboriphila NRRL B-24581 | Isolate | Unclassified |
| 10 | 2842888712 | Tsukamurella sp. R-71941 | Isolate | Unclassified |
| 11 | 2889300758 | Rhodococcus sp. PvR099 | Isolate | Rhizosphere |
| 12 | 2902810491 | Mycolicibacterium sp. P9-22 | Isolate | Unclassified |
| 13 | 2904765812 | Rhodococcus fascians 1590 | Isolate | Rhizosphere |
| 14 | 2904770941 | Rhodococcus fascians 1339 | Isolate | Rhizosphere |
| 15 | 2908811453 | Rhodococcus sp. 1R11 | Isolate | Unclassified |
| 16 | 2919420072 | Rhodococcus fascians 3241 | Isolate | Rhizosphere |
| 17 | 2919432681 | Rhodococcus sp. 3258 | Isolate | Rhizosphere |
| 18 | 2919437846 | Mucilaginibacter pocheonensis 3262 | Isolate | Rhizosphere |
| 19 | 2919692658 | Algoriphagus sp. 4150 | Isolate | Rhizosphere |
| 20 | 2919713450 | Nocardia kruczakiae 4272 | Isolate | Rhizosphere |
| 21 | 2939743619 | Rhodococcus sp. PvR044 | Isolate | Rhizosphere |
| 22 | 2974315732 | Rhodococcus sp. SORGH_AS 301 | Isolate | Unclassified |
| 23 | 2977232053 | Mucilaginibacter terrae SORGH_AS 422 | Isolate | Unclassified |
| 24 | 2984523437 | Rhodococcus sp. SORGH_AS303 | Isolate | Aerial Root |
| 25 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 26 | 2984592036 | Aeromicrobium sp. SORGH_AS981 | Isolate | Aerial Root |
| 27 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 28 | 3300002077 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 | Metagenome | Rhizosphere |
| 29 | 3300002737 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA | Metagenome | Endosphere |
| 30 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 31 | 3300003790 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 | Metagenome | Endosphere |
| 32 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 33 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 34 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 35 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 36 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 38 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 39 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 40 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 42 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 43 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 44 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 45 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 46 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 47 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 48 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 49 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 50 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 51 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 52 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 54 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 55 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 61 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 62 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300025233 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 69 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 70 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 71 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 74 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 75 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 92 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 93 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 94 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 95 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 96 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 97 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 98 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 99 | 3300038725 | Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 | Metagenome | Unclassified |
| 100 | 3300041410 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 | Metagenome | Rhizosphere |
| 101 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 102 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 103 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 104 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 105 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 106 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 107 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 108 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 109 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 110 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 111 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 112 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 113 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 114 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 115 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 116 | 3300046518 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046525 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300048090 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 126 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 127 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 128 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 129 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 130 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 131 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 132 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 133 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 134 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 135 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 136 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 137 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 138 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 139 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 140 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 141 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 142 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 143 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 145 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 146 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 147 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 148 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 149 | 3300053157 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere | Metagenome | Endosphere |
| 150 | 3300053158 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere | Metagenome | Endosphere |
| 151 | 8002745576 | Marinomonas spartinae USM8 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 84.27 |
| Metatranscriptomes | 0 |
| Isolates | 15.73 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 2.25 |
| Bulb | 0 |
| Endosphere | 15.17 |
| Nodule | 1.69 |
| Rhizoplane | 6.18 |
| Rhizosphere | 60.67 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 14.04 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24744J21845_10006011 | 3300002077 | Bacteria | 2517 |
| 2 | JGI25162J39368_1000024 | 3300002737 | Bacteria | 229507 |
| 3 | Ga0055526_1011505 | 3300003771 | Bacteria | 3975 |
| 4 | Ga0055528_1000792 | 3300003790 | Bacteria | 21947 |
| 5 | Ga0055530_10000615 | 3300003791 | Bacteria | 30910 |
| 6 | Ga0055540_1000044 | 3300003792 | Bacteria | 153394 |
| 7 | Ga0065165_1000052 | 3300005262 | Bacteria | 192010 |
| 8 | Ga0065704_10114368 | 3300005289 | Unclassified | 1882 |
| 9 | Ga0070676_10000160 | 3300005328 | Bacteria | 27029 |
| 10 | Ga0068868_100138485 | 3300005338 | Bacteria | 1996 |
| 11 | Ga0070673_100001611 | 3300005364 | Bacteria | 13340 |
| 12 | Ga0070678_100070507 | 3300005456 | Bacteria | 2613 |
| 13 | Ga0070662_100000019 | 3300005457 | Bacteria | 101983 |
| 14 | Ga0068867_100000157 | 3300005459 | Bacteria | 43891 |
| 15 | Ga0070706_100003726 | 3300005467 | Bacteria | 14899 |
| 16 | Ga0070698_100005363 | 3300005471 | Bacteria | 14025 |
| 17 | Ga0070698_100049199 | 3300005471 | Bacteria | 4304 |
| 18 | Ga0068855_100159267 | 3300005563 | Bacteria | 2563 |
| 19 | Ga0068854_100038763 | 3300005578 | Bacteria | 3353 |
| 20 | Ga0068856_100000249 | 3300005614 | Bacteria | 58494 |
| 21 | Ga0068856_100088721 | 3300005614 | Bacteria | 3075 |
| 22 | Ga0068852_100024307 | 3300005616 | Bacteria | 4894 |
| 23 | Ga0068864_100024862 | 3300005618 | Bacteria | 5038 |
| 24 | Ga0068863_100073185 | 3300005841 | Bacteria | 3242 |
| 25 | Ga0075367_10016936 | 3300006178 | Bacteria | 3989 |
| 26 | Ga0075366_10001636 | 3300006195 | Bacteria | 11236 |
| 27 | Ga0075366_10015969 | 3300006195 | Bacteria | 4311 |
| 28 | Ga0097621_100000124 | 3300006237 | Bacteria | 44451 |
| 29 | Ga0068871_100000160 | 3300006358 | Bacteria | 44466 |
| 30 | Ga0068865_100001563 | 3300006881 | Bacteria | 13386 |
| 31 | Ga0105240_10095036 | 3300009093 | Bacteria | 3635 |
| 32 | Ga0105245_10008254 | 3300009098 | Bacteria | 9102 |
| 33 | Ga0105241_10005875 | 3300009174 | Bacteria | 9056 |
| 34 | Ga0105241_10124755 | 3300009174 | Bacteria | 2078 |
| 35 | Ga0105237_10002584 | 3300009545 | Bacteria | 22322 |
| 36 | Ga0105237_10005711 | 3300009545 | Bacteria | 13991 |
| 37 | Ga0105237_10008667 | 3300009545 | Bacteria | 10987 |
| 38 | Ga0105237_10019755 | 3300009545 | Bacteria | 6955 |
| 39 | Ga0105238_10046621 | 3300009551 | Bacteria | 4372 |
| 40 | Ga0105249_10004091 | 3300009553 | Bacteria | 12592 |
| 41 | Ga0105239_10000005 | 3300010375 | Bacteria | 496066 |
| 42 | Ga0105239_10000062 | 3300010375 | Bacteria | 153782 |
| 43 | Ga0105239_10021696 | 3300010375 | Bacteria | 7079 |
| 44 | Ga0105239_10068929 | 3300010375 | Bacteria | 3887 |
| 45 | Ga0157374_10000746 | 3300013296 | Bacteria | 28337 |
| 46 | Ga0157378_10017174 | 3300013297 | Bacteria | 6343 |
| 47 | Ga0163162_10107107 | 3300013306 | Bacteria | 2890 |
| 48 | Ga0157375_10209196 | 3300013308 | Bacteria | 2108 |
| 49 | Ga0157376_10014131 | 3300014969 | Bacteria | 5980 |
| 50 | Ga0209437_100017 | 3300025233 | Bacteria | 694471 |
| 51 | Ga0209673_1000226 | 3300025273 | Bacteria | 111427 |
| 52 | Ga0209564_1001122 | 3300025295 | Bacteria | 31508 |
| 53 | Ga0209564_1003198 | 3300025295 | Bacteria | 11503 |
| 54 | Ga0209758_1001591 | 3300025297 | Bacteria | 25975 |
| 55 | Ga0209758_1002183 | 3300025297 | Bacteria | 20512 |
| 56 | Ga0209050_1000259 | 3300025298 | Bacteria | 113475 |
| 57 | Ga0207426_1002384 | 3300025302 | Bacteria | 12129 |
| 58 | Ga0209051_1000051 | 3300025303 | Bacteria | 283620 |
| 59 | Ga0209257_1003464 | 3300025304 | Bacteria | 13484 |
| 60 | Ga0207645_10001043 | 3300025907 | Bacteria | 22916 |
| 61 | Ga0207705_10008285 | 3300025909 | Bacteria | 7593 |
| 62 | Ga0207684_10003490 | 3300025910 | Bacteria | 15343 |
| 63 | Ga0207695_10033263 | 3300025913 | Bacteria | 5626 |
| 64 | Ga0207695_10114047 | 3300025913 | Bacteria | 2678 |
| 65 | Ga0207671_10006702 | 3300025914 | Bacteria | 10204 |
| 66 | Ga0207671_10008433 | 3300025914 | Bacteria | 8740 |
| 67 | Ga0207671_10009530 | 3300025914 | Bacteria | 8107 |
| 68 | Ga0207671_10043632 | 3300025914 | Bacteria | 3316 |
| 69 | Ga0207709_10000373 | 3300025935 | Bacteria | 45160 |
| 70 | Ga0207704_10000135 | 3300025938 | Bacteria | 40033 |
| 71 | Ga0207667_10012891 | 3300025949 | Bacteria | 9605 |
| 72 | Ga0207667_10014802 | 3300025949 | Bacteria | 8874 |
| 73 | Ga0207712_10003852 | 3300025961 | Bacteria | 9475 |
| 74 | Ga0207640_10022295 | 3300025981 | Bacteria | 3788 |
| 75 | Ga0207640_10122853 | 3300025981 | Bacteria | 1864 |
| 76 | Ga0207677_10116657 | 3300026023 | Bacteria | 1999 |
| 77 | Ga0207639_10075897 | 3300026041 | Bacteria | 2645 |
| 78 | Ga0207678_10001394 | 3300026067 | Bacteria | 22232 |
| 79 | Ga0207702_10000646 | 3300026078 | Bacteria | 38120 |
| 80 | Ga0207648_10005143 | 3300026089 | Bacteria | 13243 |
| 81 | Ga0207676_10106285 | 3300026095 | Bacteria | 2338 |
| 82 | Ga0307517_10010330 | 3300028786 | Bacteria | 13079 |
| 83 | Ga0307517_10021566 | 3300028786 | Bacteria | 8130 |
| 84 | Ga0265340_10036857 | 3300031247 | Bacteria | 2422 |
| 85 | Ga0265327_10000081 | 3300031251 | Bacteria | 205988 |
| 86 | Ga0265327_10000532 | 3300031251 | Bacteria | 65543 |
| 87 | Ga0265327_10000974 | 3300031251 | Bacteria | 40908 |
| 88 | Ga0265327_10016564 | 3300031251 | Bacteria | 4672 |
| 89 | Ga0307509_10169771 | 3300031507 | Bacteria | 2063 |
| 90 | Ga0307516_10055523 | 3300031730 | Bacteria | 3865 |
| 91 | Ga0307410_10080895 | 3300031852 | Bacteria | 2281 |
| 92 | Ga0307406_10087135 | 3300031901 | Bacteria | 2092 |
| 93 | Ga0307510_10001317 | 3300033180 | Bacteria | 27057 |
| 94 | Ga0400484_32680 | 3300038725 | Bacteria | 10037 |
| 95 | Ga0439461_0000506 | 3300041410 | Bacteria | 5652 |
| 96 | Ga0439466_0009955 | 3300041411 | Bacteria | 3537 |
| 97 | Ga0439465_0014986 | 3300041413 | Bacteria | 2418 |
| 98 | Ga0451797_0304330 | 3300041453 | Bacteria | 3700 |
| 99 | Ga0439457_002268 | 3300042014 | Bacteria | 5546 |
| 100 | Ga0439434_0001915 | 3300042435 | Bacteria | 6039 |
| 101 | Ga0466972_0062991 | 3300044658 | Bacteria | 1776 |
| 102 | Ga0466965_0005883 | 3300044683 | Bacteria | 5539 |
| 103 | Ga0466966_0027110 | 3300044684 | Bacteria | 3736 |
| 104 | Ga0466966_0081214 | 3300044684 | Bacteria | 2018 |
| 105 | Ga0466961_0006974 | 3300044693 | Bacteria | 7185 |
| 106 | Ga0466968_0006302 | 3300044735 | Bacteria | 4466 |
| 107 | Ga0466970_0016348 | 3300044765 | Bacteria | 3823 |
| 108 | Ga0466957_0021094 | 3300044842 | Bacteria | 3836 |
| 109 | Ga0466960_0000324 | 3300044901 | Bacteria | 16442 |
| 110 | Ga0466959_0016065 | 3300045049 | Bacteria | 5464 |
| 111 | Ga0466967_0242572 | 3300045976 | Bacteria | 1719 |
| 112 | Ga0495631_0027566 | 3300046518 | Bacteria | 2598 |
| 113 | Ga0495644_0043303 | 3300046523 | Bacteria | 1694 |
| 114 | Ga0495663_0002061 | 3300046525 | Bacteria | 6153 |
| 115 | Ga0495668_0103878 | 3300046616 | Bacteria | 1555 |
| 116 | Ga0495625_0006029 | 3300046660 | Bacteria | 10889 |
| 117 | Ga0495649_0000739 | 3300046694 | Bacteria | 26443 |
| 118 | Ga0495660_0003137 | 3300046810 | Bacteria | 10290 |
| 119 | Ga0495687_000350 | 3300047443 | Bacteria | 59063 |
| 120 | Ga0495687_011935 | 3300047443 | Bacteria | 4634 |
| 121 | Ga0495615_0001415 | 3300048090 | Bacteria | 3561 |
| 122 | Ga0496100_0000058 | 3300048903 | Bacteria | 66204 |
| 123 | Ga0496101_0000020 | 3300048904 | Bacteria | 218859 |
| 124 | Ga0496106_0002153 | 3300048909 | Bacteria | 14717 |
| 125 | Ga0496107_0004160 | 3300048910 | Bacteria | 9764 |
| 126 | Ga0496108_0001018 | 3300048911 | Bacteria | 21838 |
| 127 | Ga0496109_0000130 | 3300048912 | Bacteria | 76879 |
| 128 | Ga0496110_0047570 | 3300048913 | Bacteria | 3757 |
| 129 | Ga0496111_0038107 | 3300048914 | Bacteria | 3443 |
| 130 | Ga0496113_0021840 | 3300048916 | Bacteria | 4519 |
| 131 | Ga0496114_0002655 | 3300048917 | Bacteria | 13643 |
| 132 | Ga0496117_0006914 | 3300048920 | Bacteria | 11250 |
| 133 | Ga0496119_0008333 | 3300048922 | Bacteria | 9136 |
| 134 | Ga0496121_0000002 | 3300048924 | Bacteria | 1494588 |
| 135 | Ga0496122_0000312 | 3300048925 | Bacteria | 107109 |
| 136 | Ga0496122_0021158 | 3300048925 | Bacteria | 5835 |
| 137 | Ga0496123_0104954 | 3300048926 | Bacteria | 1632 |
| 138 | Ga0496124_0000002 | 3300048927 | Bacteria | 1494588 |
| 139 | Ga0496125_0000002 | 3300048928 | Bacteria | 1480920 |
| 140 | Ga0496126_0000011 | 3300048929 | Bacteria | 744275 |
| 141 | Ga0496126_0027153 | 3300048929 | Bacteria | 5474 |
| 142 | Ga0501044_0017005 | 3300049823 | Bacteria | 7804 |
| 143 | nmdc:mga0k408_26987_c1 | 3300050493 | Bacteria | 3259 |
| 144 | Ga0500608_000370 | 3300053122 | Bacteria | 17462 |
| 145 | Ga0500658_0000961 | 3300053134 | Bacteria | 11768 |
| 146 | Ga0500616_0000612 | 3300053153 | Bacteria | 43296 |
| 147 | Ga0500622_0000034 | 3300053156 | Bacteria | 187647 |
| 148 | Ga0500622_0000235 | 3300053156 | Bacteria | 57565 |
| 149 | Ga0500624_000418 | 3300053157 | Bacteria | 13022 |
| 150 | Ga0500627_0098461 | 3300053158 | Bacteria | 1312 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300048926 | Ga0496123_0104954 | Ga0496123_0104954_296_1546 | 407 |
| 2 | 3300053158 | Ga0500627_0098461 | Ga0500627_0098461_30_1262 | 409 |
| 3 | 3300002737 | JGI25162J39368_1000024 | JGI25162J39368_100002457 | 443 |
| 4 | 3300010375 | Ga0105239_10000062 | Ga0105239_1000006265 | 443 |
| 5 | 3300025233 | Ga0209437_100017 | Ga0209437_10001758 | 443 |
| 6 | 3300044684 | Ga0466966_0081214 | Ga0466966_0081214_330_1721 | 443 |
| 7 | 3300044693 | Ga0466961_0006974 | Ga0466961_0006974_592_1983 | 443 |
| 8 | 3300044765 | Ga0466970_0016348 | Ga0466970_0016348_1568_2959 | 443 |
| 9 | 3300045049 | Ga0466959_0016065 | Ga0466959_0016065_3073_4464 | 443 |
| 10 | 3300025935 | Ga0207709_10000373 | Ga0207709_100003735 | 446 |
| 11 | 3300031251 | Ga0265327_10000974 | Ga0265327_1000097413 | 447 |
| 12 | 3300045976 | Ga0466967_0242572 | Ga0466967_0242572_318_1700 | 451 |
| 13 | 3300053153 | Ga0500616_0000612 | Ga0500616_0000612_26387_27793 | 451 |
| 14 | iso_pu_bacteria | 2919692658 | 2919693706 | 451 |
| 15 | iso_pu_bacteria | 2977232053 | 2977232922 | 453 |
| 16 | iso_pu_bacteria | 2523231044 | 2523387581 | 454 |
| 17 | iso_pu_bacteria | 2919437846 | 2919441238 | 454 |
| 18 | 3300003771 | Ga0055526_1011505 | Ga0055526_10115054 | 455 |
| 19 | 3300003790 | Ga0055528_1000792 | Ga0055528_100079210 | 455 |
| 20 | 3300003791 | Ga0055530_10000615 | Ga0055530_100006154 | 455 |
| 21 | 3300005262 | Ga0065165_1000052 | Ga0065165_100005299 | 455 |
| 22 | 3300005471 | Ga0070698_100005363 | Ga0070698_1000053634 | 455 |
| 23 | 3300005471 | Ga0070698_100049199 | Ga0070698_1000491994 | 455 |
| 24 | 3300005614 | Ga0068856_100000249 | Ga0068856_10000024917 | 455 |
| 25 | 3300009553 | Ga0105249_10004091 | Ga0105249_100040916 | 455 |
| 26 | 3300025273 | Ga0209673_1000226 | Ga0209673_100022696 | 455 |
| 27 | 3300025295 | Ga0209564_1001122 | Ga0209564_10011226 | 455 |
| 28 | 3300025295 | Ga0209564_1003198 | Ga0209564_10031984 | 455 |
| 29 | 3300025297 | Ga0209758_1001591 | Ga0209758_100159115 | 455 |
| 30 | 3300025297 | Ga0209758_1002183 | Ga0209758_10021833 | 455 |
| 31 | 3300025298 | Ga0209050_1000259 | Ga0209050_100025969 | 455 |
| 32 | 3300025302 | Ga0207426_1002384 | Ga0207426_10023848 | 455 |
| 33 | 3300025304 | Ga0209257_1003464 | Ga0209257_10034643 | 455 |
| 34 | 3300025961 | Ga0207712_10003852 | Ga0207712_100038524 | 455 |
| 35 | 3300026078 | Ga0207702_10000646 | Ga0207702_1000064619 | 455 |
| 36 | 3300046523 | Ga0495644_0043303 | Ga0495644_0043303_153_1532 | 455 |
| 37 | 3300046525 | Ga0495663_0002061 | Ga0495663_0002061_3437_4810 | 455 |
| 38 | 3300048090 | Ga0495615_0001415 | Ga0495615_0001415_548_1921 | 455 |
| 39 | iso_pu_bacteria | 2643221715 | 2644635777 | 456 |
| 40 | iso_pu_bacteria | 2902810491 | 2902813579 | 456 |
| 41 | iso_pu_bacteria | 2919713450 | 2919714408 | 456 |
| 42 | iso_pu_bacteria | 2984592036 | 2984593929 | 456 |
| 43 | 3300005563 | Ga0068855_100159267 | Ga0068855_1001592672 | 457 |
| 44 | 3300005614 | Ga0068856_100088721 | Ga0068856_1000887212 | 457 |
| 45 | 3300010375 | Ga0105239_10000005 | Ga0105239_10000005129 | 457 |
| 46 | 3300025909 | Ga0207705_10008285 | Ga0207705_100082853 | 457 |
| 47 | 3300025913 | Ga0207695_10033263 | Ga0207695_100332633 | 457 |
| 48 | 3300025949 | Ga0207667_10012891 | Ga0207667_100128913 | 457 |
| 49 | 3300025981 | Ga0207640_10122853 | Ga0207640_101228531 | 457 |
| 50 | 3300026067 | Ga0207678_10001394 | Ga0207678_100013948 | 457 |
| 51 | 3300031251 | Ga0265327_10000532 | Ga0265327_1000053250 | 457 |
| 52 | 3300053156 | Ga0500622_0000034 | Ga0500622_0000034_31301_32677 | 457 |
| 53 | 3300053156 | Ga0500622_0000235 | Ga0500622_0000235_12279_13655 | 457 |
| 54 | 3300053157 | Ga0500624_000418 | Ga0500624_000418_2892_4289 | 457 |
| 55 | iso_pu_bacteria | 2738543011 | 2739236808 | 457 |
| 56 | iso_pu_bacteria | 2889300758 | 2889305701 | 457 |
| 57 | iso_pu_bacteria | 2904765812 | 2904766169 | 457 |
| 58 | iso_pu_bacteria | 2904770941 | 2904773340 | 457 |
| 59 | iso_pu_bacteria | 2908811453 | 2908812068 | 457 |
| 60 | iso_pu_bacteria | 2919420072 | 2919421405 | 457 |
| 61 | iso_pu_bacteria | 2919432681 | 2919432837 | 457 |
| 62 | iso_pu_bacteria | 2939743619 | 2939743836 | 457 |
| 63 | iso_pu_bacteria | 2974315732 | 2974316167 | 457 |
| 64 | iso_pu_bacteria | 2984523437 | 2984524329 | 457 |
| 65 | iso_pu_bacteria | 2984576629 | 2984578245 | 457 |
| 66 | iso_pu_bacteria | 2990256926 | 2990257757 | 457 |
| 67 | 3300005578 | Ga0068854_100038763 | Ga0068854_1000387633 | 458 |
| 68 | 3300009093 | Ga0105240_10095036 | Ga0105240_100950363 | 458 |
| 69 | 3300009174 | Ga0105241_10124755 | Ga0105241_101247552 | 458 |
| 70 | 3300009545 | Ga0105237_10005711 | Ga0105237_100057118 | 458 |
| 71 | 3300009545 | Ga0105237_10008667 | Ga0105237_100086672 | 458 |
| 72 | 3300010375 | Ga0105239_10021696 | Ga0105239_100216962 | 458 |
| 73 | 3300025913 | Ga0207695_10114047 | Ga0207695_101140472 | 458 |
| 74 | 3300025914 | Ga0207671_10008433 | Ga0207671_100084338 | 458 |
| 75 | 3300025914 | Ga0207671_10009530 | Ga0207671_100095305 | 458 |
| 76 | 3300025981 | Ga0207640_10022295 | Ga0207640_100222952 | 458 |
| 77 | 3300042014 | Ga0439457_002268 | Ga0439457_002268_234_1613 | 458 |
| 78 | 3300048914 | Ga0496111_0038107 | Ga0496111_0038107_1619_3022 | 458 |
| 79 | iso_pu_bacteria | 2510065045 | 2510248049 | 458 |
| 80 | iso_pu_bacteria | 2515154123 | 2515687234 | 458 |
| 81 | iso_pu_bacteria | 2718217991 | 2719643524 | 458 |
| 82 | iso_pu_bacteria | 2744054611 | 2744954178 | 458 |
| 83 | iso_pu_bacteria | 2842888712 | 2842889479 | 458 |
| 84 | 3300013306 | Ga0163162_10107107 | Ga0163162_101071072 | 459 |
| 85 | 3300025949 | Ga0207667_10014802 | Ga0207667_100148023 | 459 |
| 86 | 3300031247 | Ga0265340_10036857 | Ga0265340_100368571 | 459 |
| 87 | 3300003792 | Ga0055540_1000044 | Ga0055540_100004443 | 460 |
| 88 | 3300009545 | Ga0105237_10019755 | Ga0105237_100197555 | 460 |
| 89 | 3300025303 | Ga0209051_1000051 | Ga0209051_100005142 | 460 |
| 90 | 3300025914 | Ga0207671_10006702 | Ga0207671_100067029 | 460 |
| 91 | 3300031251 | Ga0265327_10016564 | Ga0265327_100165642 | 460 |
| 92 | 3300031852 | Ga0307410_10080895 | Ga0307410_100808952 | 460 |
| 93 | 3300031901 | Ga0307406_10087135 | Ga0307406_100871352 | 460 |
| 94 | 3300041410 | Ga0439461_0000506 | Ga0439461_0000506_1621_3030 | 460 |
| 95 | 3300041411 | Ga0439466_0009955 | Ga0439466_0009955_1317_2726 | 460 |
| 96 | 3300041413 | Ga0439465_0014986 | Ga0439465_0014986_630_2039 | 460 |
| 97 | 3300041453 | Ga0451797_0304330 | Ga0451797_0304330_1614_3029 | 460 |
| 98 | 3300042435 | Ga0439434_0001915 | Ga0439434_0001915_2994_4403 | 460 |
| 99 | 3300044683 | Ga0466965_0005883 | Ga0466965_0005883_2314_3723 | 460 |
| 100 | 3300048903 | Ga0496100_0000058 | Ga0496100_0000058_63206_64615 | 460 |
| 101 | 3300048904 | Ga0496101_0000020 | Ga0496101_0000020_194703_196112 | 460 |
| 102 | 3300048909 | Ga0496106_0002153 | Ga0496106_0002153_10840_12249 | 460 |
| 103 | 3300048910 | Ga0496107_0004160 | Ga0496107_0004160_3244_4653 | 460 |
| 104 | 3300048911 | Ga0496108_0001018 | Ga0496108_0001018_18888_20297 | 460 |
| 105 | 3300048912 | Ga0496109_0000130 | Ga0496109_0000130_35702_37111 | 460 |
| 106 | 3300048913 | Ga0496110_0047570 | Ga0496110_0047570_2024_3433 | 460 |
| 107 | 3300048916 | Ga0496113_0021840 | Ga0496113_0021840_1603_3012 | 460 |
| 108 | 3300048917 | Ga0496114_0002655 | Ga0496114_0002655_1576_2985 | 460 |
| 109 | 3300048920 | Ga0496117_0006914 | Ga0496117_0006914_1525_2934 | 460 |
| 110 | 3300048922 | Ga0496119_0008333 | Ga0496119_0008333_820_2229 | 460 |
| 111 | 3300048924 | Ga0496121_0000002 | Ga0496121_0000002_901227_902636 | 460 |
| 112 | 3300048925 | Ga0496122_0000312 | Ga0496122_0000312_22719_24128 | 460 |
| 113 | 3300048927 | Ga0496124_0000002 | Ga0496124_0000002_591953_593362 | 460 |
| 114 | 3300048928 | Ga0496125_0000002 | Ga0496125_0000002_901227_902636 | 460 |
| 115 | 3300048929 | Ga0496126_0000011 | Ga0496126_0000011_591953_593362 | 460 |
| 116 | 3300005338 | Ga0068868_100138485 | Ga0068868_1001384852 | 461 |
| 117 | 3300005467 | Ga0070706_100003726 | Ga0070706_10000372614 | 461 |
| 118 | 3300005618 | Ga0068864_100024862 | Ga0068864_1000248624 | 461 |
| 119 | 3300005841 | Ga0068863_100073185 | Ga0068863_1000731852 | 461 |
| 120 | 3300006178 | Ga0075367_10016936 | Ga0075367_100169364 | 461 |
| 121 | 3300006195 | Ga0075366_10001636 | Ga0075366_100016367 | 461 |
| 122 | 3300006195 | Ga0075366_10015969 | Ga0075366_100159693 | 461 |
| 123 | 3300009098 | Ga0105245_10008254 | Ga0105245_100082544 | 461 |
| 124 | 3300013308 | Ga0157375_10209196 | Ga0157375_102091962 | 461 |
| 125 | 3300025910 | Ga0207684_10003490 | Ga0207684_1000349010 | 461 |
| 126 | 3300026023 | Ga0207677_10116657 | Ga0207677_101166572 | 461 |
| 127 | 3300026095 | Ga0207676_10106285 | Ga0207676_101062852 | 461 |
| 128 | 3300028786 | Ga0307517_10021566 | Ga0307517_100215666 | 461 |
| 129 | 3300031251 | Ga0265327_10000081 | Ga0265327_10000081191 | 461 |
| 130 | 3300031507 | Ga0307509_10169771 | Ga0307509_101697712 | 461 |
| 131 | 3300031730 | Ga0307516_10055523 | Ga0307516_100555233 | 461 |
| 132 | 3300046660 | Ga0495625_0006029 | Ga0495625_0006029_523_1911 | 461 |
| 133 | 3300046694 | Ga0495649_0000739 | Ga0495649_0000739_18310_19698 | 461 |
| 134 | 3300046810 | Ga0495660_0003137 | Ga0495660_0003137_2253_3641 | 461 |
| 135 | 3300047443 | Ga0495687_000350 | Ga0495687_000350_16991_18379 | 461 |
| 136 | 3300047443 | Ga0495687_011935 | Ga0495687_011935_2047_3435 | 461 |
| 137 | 3300050493 | nmdc:mga0k408_26987_c1 | nmdc:mga0k408_26987_c1_1292_2680 | 461 |
| 138 | 3300053134 | Ga0500658_0000961 | Ga0500658_0000961_8515_9903 | 461 |
| 139 | iso_pu_bacteria | 2751185725 | 2753037364 | 461 |
| 140 | iso_pu_bacteria | 2751185792 | 2753325233 | 461 |
| 141 | 3300002077 | JGI24744J21845_10006011 | JGI24744J21845_100060112 | 462 |
| 142 | 3300005289 | Ga0065704_10114368 | Ga0065704_101143681 | 462 |
| 143 | 3300005328 | Ga0070676_10000160 | Ga0070676_1000016013 | 462 |
| 144 | 3300005364 | Ga0070673_100001611 | Ga0070673_10000161112 | 462 |
| 145 | 3300005456 | Ga0070678_100070507 | Ga0070678_1000705072 | 462 |
| 146 | 3300005457 | Ga0070662_100000019 | Ga0070662_10000001911 | 462 |
| 147 | 3300005459 | Ga0068867_100000157 | Ga0068867_1000001577 | 462 |
| 148 | 3300005616 | Ga0068852_100024307 | Ga0068852_1000243073 | 462 |
| 149 | 3300006237 | Ga0097621_100000124 | Ga0097621_10000012422 | 462 |
| 150 | 3300006358 | Ga0068871_100000160 | Ga0068871_10000016022 | 462 |
| 151 | 3300006881 | Ga0068865_100001563 | Ga0068865_1000015633 | 462 |
| 152 | 3300009174 | Ga0105241_10005875 | Ga0105241_100058752 | 462 |
| 153 | 3300009545 | Ga0105237_10002584 | Ga0105237_1000258411 | 462 |
| 154 | 3300009551 | Ga0105238_10046621 | Ga0105238_100466212 | 462 |
| 155 | 3300010375 | Ga0105239_10068929 | Ga0105239_100689292 | 462 |
| 156 | 3300013296 | Ga0157374_10000746 | Ga0157374_1000074614 | 462 |
| 157 | 3300013297 | Ga0157378_10017174 | Ga0157378_100171745 | 462 |
| 158 | 3300014969 | Ga0157376_10014131 | Ga0157376_100141315 | 462 |
| 159 | 3300025907 | Ga0207645_10001043 | Ga0207645_1000104311 | 462 |
| 160 | 3300025914 | Ga0207671_10043632 | Ga0207671_100436323 | 462 |
| 161 | 3300025938 | Ga0207704_10000135 | Ga0207704_100001353 | 462 |
| 162 | 3300026041 | Ga0207639_10075897 | Ga0207639_100758972 | 462 |
| 163 | 3300026089 | Ga0207648_10005143 | Ga0207648_1000514312 | 462 |
| 164 | 3300028786 | Ga0307517_10010330 | Ga0307517_100103302 | 462 |
| 165 | 3300033180 | Ga0307510_10001317 | Ga0307510_100013178 | 462 |
| 166 | 3300038725 | Ga0400484_32680 | Ga0400484_32680_7164_8582 | 462 |
| 167 | 3300044658 | Ga0466972_0062991 | Ga0466972_0062991_268_1683 | 462 |
| 168 | 3300044684 | Ga0466966_0027110 | Ga0466966_0027110_1811_3205 | 462 |
| 169 | 3300044735 | Ga0466968_0006302 | Ga0466968_0006302_1581_2996 | 462 |
| 170 | 3300044842 | Ga0466957_0021094 | Ga0466957_0021094_1704_3119 | 462 |
| 171 | 3300044901 | Ga0466960_0000324 | Ga0466960_0000324_7057_8472 | 462 |
| 172 | 3300046518 | Ga0495631_0027566 | Ga0495631_0027566_1183_2571 | 462 |
| 173 | 3300046616 | Ga0495668_0103878 | Ga0495668_0103878_47_1441 | 462 |
| 174 | 3300048925 | Ga0496122_0021158 | Ga0496122_0021158_468_1883 | 462 |
| 175 | 3300048929 | Ga0496126_0027153 | Ga0496126_0027153_1738_3153 | 462 |
| 176 | 3300049823 | Ga0501044_0017005 | Ga0501044_0017005_2666_4078 | 462 |
| 177 | 3300053122 | Ga0500608_000370 | Ga0500608_000370_6887_8275 | 462 |
| 178 | iso_pu_bacteria | 8002745576 | 8002746174 | 462 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3abo-assembly1.cif.gz_A | crystal structure of ethanolamine ammonia-lyase from escherichia coli complexed with cn-cbl and ethanolamine | 0.9553 | 1 | 454 |
| 2qez-assembly4.cif.gz_C | crystal structure of ethanolamine ammonia-lyase heavy chain (yp_013784.1) from listeria monocytogenes 4b f2365 at 2.15 a resolution | 0.9534 | 11 | 449 |
| 2qez-assembly3.cif.gz_E | crystal structure of ethanolamine ammonia-lyase heavy chain (yp_013784.1) from listeria monocytogenes 4b f2365 at 2.15 a resolution | 0.9514 | 1 | 455 |
| 3abo-assembly1.cif.gz_A | crystal structure of ethanolamine ammonia-lyase from escherichia coli complexed with cn-cbl and ethanolamine | 0.9512 | 1 | 454 |
| 2qez-assembly2.cif.gz_A | crystal structure of ethanolamine ammonia-lyase heavy chain (yp_013784.1) from listeria monocytogenes 4b f2365 at 2.15 a resolution | 0.949 | 1 | 454 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2qezF01 | Mainly Beta;Roll;Ribosomal Protein L24e; Chain: T;;ethanolamine ammonia-lyase heavy chain domain like | 0.9912 | 10 | 53 | 2.30.170.30 |
| 3aboA01 | Mainly Beta;Roll;Ribosomal Protein L24e; Chain: T;;ethanolamine ammonia-lyase heavy chain domain like | 0.9579 | 1 | 54 | 2.30.170.30 |
| 3aboA01 | Mainly Beta;Roll;Ribosomal Protein L24e; Chain: T;;ethanolamine ammonia-lyase heavy chain domain like | 0.941 | 1 | 54 | 2.30.170.30 |
| 2qezE03 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I | 0.9173 | 143 | 455 | 3.20.20.70 |
| 2qezA02 | Mainly Alpha;Orthogonal Bundle;Annexin V; domain 1;lyase | 0.9098 | 56 | 140 | 1.10.220.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3B9L6R8-F1-model_v4 | Ethanolamine ammonia lyase large subunit | 0.9939 | 1 | 140 |
GO:0005829
GO:0006520 GO:0008851 GO:0009350 GO:0046336 |
| AF-A0A4Q3JM67-F1-model_v4 | deleted | 0.9932 | 48 | 128 |
|
| AF-A0A0C3AC28-F1-model_v4 | deleted | 0.9928 | 1 | 101 |
|
| AF-A0A3T1DIH3-F1-model_v4 | deleted | 0.9927 | 1 | 140 |
|
| AF-A0A3N5T7W1-F1-model_v4 | Ethanolamine ammonia lyase large subunit | 0.9923 | 1 | 153 |
GO:0005829
GO:0006520 GO:0008851 GO:0009350 GO:0046336 |
Predicted Structure (AlphaFold2)
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