F272588

General Info

Members Datasets Scaffolds Average Seq Length
178 121 170 215

Family's Representative Sequence

Representative Sequence 3300046538|Ga0495609_0003634|Ga0495609_0003634_3231_3968
Length 245
Sequence MAAAANMGFLCFVLQSIHLIKYIMKTDLEIQKDVMDELKWQPFLHAAEIGVSVKNGVVTLSGQVDNYGKKLAAENAARKVAGVKALAEDLQVGISPAYRKTDAEIAEAVLNALKWHTAIPDDRIKVKVEDGIVKLEGEVEWEFQRNSAKTAVQYLTGVRSVVNLVTVRPKVSADDLEKKISAAFHRSATIDAAKVNVSVIGNKAVLTGKVRSFAEKQEAEDAVWAAPGIFSLESKLQVAEPELVF

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
3 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
6 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
7 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
61 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
62 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
63 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
64 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
90 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
91 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
92 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
93 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
98 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
103 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
104 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
105 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
106 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
107 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
108 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
109 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
110 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
111 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
114 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
115 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
116 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
117 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
118 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
120 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
121 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.63
Metatranscriptomes 1.69
Isolates 1.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.99
Nodule 0
Rhizoplane 0.56
Rhizosphere 83.15
Stem 0
Stem Tuber 0
Unclassified 7.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1663050 2162886007 Bacteria 482194
2 JGI25162J39368_1010866 3300002737 Bacteria 1127
3 JGI25164J39214_1001920 3300002772 Bacteria 3836
4 JGI25164J39214_1002702 3300002772 Bacteria 2557
5 JGI25165J46597_1001776 3300003214 Bacteria 9315
6 JGI25165J46597_1002558 3300003214 Bacteria 5619
7 rootH1_10043944 3300003316 Bacteria 11256
8 rootH1_10070827 3300003316 Bacteria 1875
9 rootH2_10014156 3300003320 Bacteria 18084
10 rootH2_10041573 3300003320 Bacteria 16998
11 rootH2_10061787 3300003320 Unclassified 2460
12 rootH2_10127792 3300003320 Bacteria 2236
13 rootH2_10263229 3300003320 Bacteria 2870
14 rootH2_10304198 3300003320 Bacteria 1202
15 rootH1_10122433 3300003323 Bacteria 9359
16 Ga0065714_10002588 3300005288 Bacteria 44774
17 Ga0065704_10070140 3300005289 Bacteria 482257
18 Ga0070658_10000153 3300005327 Bacteria 60625
19 Ga0068869_100005729 3300005334 Bacteria 7841
20 Ga0070680_100235069 3300005336 Bacteria 1548
21 Ga0070660_100295459 3300005339 Bacteria 1327
22 Ga0070668_100279809 3300005347 Bacteria 1393
23 Ga0070674_100466612 3300005356 Bacteria 1045
24 Ga0070659_100000352 3300005366 Bacteria 35096
25 Ga0070659_100005518 3300005366 Bacteria 9086
26 Ga0070667_100155438 3300005367 Bacteria 2011
27 Ga0070662_100711347 3300005457 Bacteria 850
28 Ga0068867_100306430 3300005459 Bacteria 1311
29 Ga0070679_100027248 3300005530 Bacteria 5622
30 Ga0070679_100056829 3300005530 Bacteria 3899
31 Ga0068853_100131307 3300005539 Bacteria 2242
32 Ga0068853_100431407 3300005539 Bacteria 1237
33 Ga0068853_100707596 3300005539 Bacteria 961
34 Ga0070672_100277197 3300005543 Bacteria 1417
35 Ga0068855_100000206 3300005563 Bacteria 75521
36 Ga0068855_100002297 3300005563 Bacteria 23625
37 Ga0068855_100025998 3300005563 Bacteria 7004
38 Ga0068857_100075049 3300005577 Bacteria 3014
39 Ga0068856_100004329 3300005614 Bacteria 14159
40 Ga0068856_100086828 3300005614 Bacteria 3109
41 Ga0068856_100142820 3300005614 Bacteria 2401
42 Ga0068859_100000029 3300005617 Bacteria 178422
43 Ga0068864_100118495 3300005618 Bacteria 2364
44 Ga0068851_10192552 3300005834 Bacteria 1134
45 Ga0068851_10399755 3300005834 Bacteria 808
46 Ga0068863_100020422 3300005841 Bacteria 6331
47 Ga0068863_100191540 3300005841 Bacteria 1965
48 Ga0068858_100002732 3300005842 Bacteria 17742
49 Ga0068860_100056933 3300005843 Unclassified 3715
50 Ga0097621_100026420 3300006237 Bacteria 4554
51 Ga0075370_10183245 3300006353 Bacteria 1233
52 Ga0068871_100314160 3300006358 Bacteria 1378
53 Ga0097620_100000029 3300006931 Bacteria 178422
54 Ga0105240_10000010 3300009093 Bacteria 537830
55 Ga0105240_10000082 3300009093 Bacteria 195184
56 Ga0105240_10042486 3300009093 Bacteria 5792
57 Ga0105245_10087878 3300009098 Bacteria 2854
58 Ga0105247_10007642 3300009101 Bacteria 6620
59 Ga0105241_10000937 3300009174 Bacteria 22075
60 Ga0105241_10001323 3300009174 Bacteria 18833
61 Ga0105241_10355342 3300009174 Bacteria 1273
62 Ga0105242_10078231 3300009176 Bacteria 2760
63 Ga0105248_10449453 3300009177 Bacteria 1452
64 Ga0105237_10000317 3300009545 Bacteria 67573
65 Ga0105237_10000801 3300009545 Bacteria 42937
66 Ga0105237_10003997 3300009545 Bacteria 17242
67 Ga0105237_10005818 3300009545 Bacteria 13830
68 Ga0105237_10033768 3300009545 Bacteria 5183
69 Ga0105237_10049177 3300009545 Bacteria 4239
70 Ga0105237_10055161 3300009545 Bacteria 3981
71 Ga0105238_11290928 3300009551 Bacteria 756
72 Ga0105239_10001363 3300010375 Bacteria 32814
73 Ga0105239_10002447 3300010375 Bacteria 23668
74 Ga0105246_10004737 3300011119 Bacteria 8286
75 Ga0157371_10006879 3300013102 Bacteria 9286
76 Ga0157371_10023522 3300013102 Unclassified 4506
77 Ga0157374_10163955 3300013296 Bacteria 2166
78 Ga0157374_10471025 3300013296 Bacteria 1258
79 Ga0157378_10040273 3300013297 Unclassified 4142
80 Ga0163162_10005972 3300013306 Bacteria 11787
81 Ga0163162_10672414 3300013306 Bacteria 1158
82 Ga0157372_10021627 3300013307 Bacteria 6953
83 Ga0157375_10069430 3300013308 Bacteria 3530
84 Ga0157375_10231367 3300013308 Bacteria 2007
85 Ga0163163_10018889 3300014325 Bacteria 6466
86 Ga0182008_10003011 3300014497 Bacteria 10354
87 Ga0157379_10041959 3300014968 Bacteria 4083
88 Ga0197907_10842051 3300020069 Bacteria 1326
89 Ga0206352_10048149 3300020078 Bacteria 1330
90 Ga0206354_10099768 3300020081 Bacteria 1327
91 Ga0207427_100060 3300025231 Bacteria 186274
92 Ga0209437_100021 3300025233 Bacteria 646400
93 Ga0209026_1000484 3300025250 Bacteria 29488
94 Ga0209026_1002963 3300025250 Bacteria 5909
95 Ga0209233_1000035 3300025261 Bacteria 568478
96 Ga0209233_1002794 3300025261 Bacteria 6275
97 Ga0209455_1003108 3300025272 Bacteria 6054
98 Ga0207710_10071089 3300025900 Bacteria 1596
99 Ga0207680_10000420 3300025903 Bacteria 20179
100 Ga0207705_10000108 3300025909 Bacteria 93501
101 Ga0207654_10002630 3300025911 Bacteria 9109
102 Ga0207654_10009966 3300025911 Bacteria 4830
103 Ga0207695_10000019 3300025913 Bacteria 732137
104 Ga0207695_10000053 3300025913 Bacteria 396740
105 Ga0207695_10138291 3300025913 Bacteria 2387
106 Ga0207695_10140443 3300025913 Bacteria 2364
107 Ga0207671_10000401 3300025914 Bacteria 60395
108 Ga0207671_10001364 3300025914 Bacteria 28531
109 Ga0207671_10003363 3300025914 Bacteria 16042
110 Ga0207671_10053801 3300025914 Bacteria 2983
111 Ga0207671_10133133 3300025914 Unclassified 1909
112 Ga0207660_10239864 3300025917 Bacteria 1428
113 Ga0207652_10018818 3300025921 Bacteria 5668
114 Ga0207694_10560322 3300025924 Bacteria 959
115 Ga0207687_10151400 3300025927 Bacteria 1770
116 Ga0207644_10177111 3300025931 Bacteria 1669
117 Ga0207690_10004237 3300025932 Bacteria 8469
118 Ga0207690_10007268 3300025932 Bacteria 6580
119 Ga0207686_10035342 3300025934 Bacteria 2999
120 Ga0207669_10515835 3300025937 Bacteria 959
121 Ga0207711_10306881 3300025941 Bacteria 1465
122 Ga0207689_10006726 3300025942 Bacteria 10139
123 Ga0207667_10000009 3300025949 Bacteria 603135
124 Ga0207667_10034849 3300025949 Bacteria 5403
125 Ga0207667_10139510 3300025949 Bacteria 2496
126 Ga0207703_10038962 3300026035 Unclassified 3796
127 Ga0207702_10026453 3300026078 Bacteria 4816
128 Ga0207702_10208379 3300026078 Bacteria 1816
129 Ga0207641_10001031 3300026088 Bacteria 28256
130 Ga0207676_10042022 3300026095 Bacteria 3514
131 Ga0207674_10094477 3300026116 Bacteria 2976
132 Ga0268264_10042593 3300028381 Unclassified 3759
133 Ga0265338_10040587 3300028800 Bacteria 4369
134 Ga0265324_10018870 3300029957 Bacteria 2487
135 Ga0265320_10129047 3300031240 Bacteria 1149
136 Ga0265340_10219072 3300031247 Unclassified 853
137 Ga0265327_10001743 3300031251 Bacteria 25762
138 Ga0307408_100000719 3300031548 Bacteria 26865
139 Ga0307408_100004527 3300031548 Bacteria 9421
140 Ga0307405_10059644 3300031731 Bacteria 2405
141 Ga0307412_10042385 3300031911 Bacteria 2957
142 Ga0307409_100248055 3300031995 Bacteria 1626
143 Ga0307507_10007645 3300033179 Bacteria 15521
144 Ga0451804_0287729 3300041463 Unclassified 847
145 Ga0453684_0034270 3300044712 Bacteria 7052
146 Ga0451576_0059084 3300045051 Bacteria 4004
147 Ga0451576_0627583 3300045051 Bacteria 1129
148 Ga0495629_0074460 3300046459 Bacteria 2371
149 Ga0495585_0000879 3300046492 Bacteria 25590
150 Ga0495606_0000143 3300046507 Bacteria 123231
151 Ga0495616_0020355 3300046513 Bacteria 3611
152 Ga0495637_0120308 3300046520 Bacteria 1011
153 Ga0495648_0032865 3300046524 Bacteria 3396
154 Ga0495663_0037097 3300046525 Bacteria 1469
155 Ga0495642_0129490 3300046528 Bacteria 1086
156 Ga0495652_0207947 3300046529 Unclassified 1480
157 Ga0495609_0003634 3300046538 Bacteria 8746
158 Ga0495609_0129240 3300046538 Bacteria 1082
159 Ga0495622_0030863 3300046557 Bacteria 2505
160 Ga0495668_0000134 3300046616 Bacteria 112135
161 Ga0495625_0000009 3300046660 Bacteria 404954
162 Ga0495625_0002496 3300046660 Bacteria 19821
163 Ga0495658_0053688 3300046683 Bacteria 2289
164 Ga0495649_0000008 3300046694 Bacteria 483706
165 Ga0495600_0296779 3300046809 Bacteria 1020
166 Ga0495660_0054756 3300046810 Unclassified 2161
167 Ga0501034_0419900 3300049571 Bacteria 1259
168 Ga0501242_011229 3300049674 Unclassified 1079
169 Ga0500614_078064 3300053123 Bacteria 921
170 Ga0500636_0079061 3300053177 Bacteria 1897

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005459 Ga0068867_100306430 Ga0068867_1003064302 167
2 3300009176 Ga0105242_10078231 Ga0105242_100782312 171
3 3300014968 Ga0157379_10041959 Ga0157379_100419592 171
4 3300025934 Ga0207686_10035342 Ga0207686_100353423 176
5 3300005334 Ga0068869_100005729 Ga0068869_1000057292 187
6 3300005347 Ga0070668_100279809 Ga0070668_1002798092 187
7 3300005367 Ga0070667_100155438 Ga0070667_1001554383 187
8 3300005543 Ga0070672_100277197 Ga0070672_1002771972 187
9 3300005617 Ga0068859_100000029 Ga0068859_100000029124 187
10 3300005618 Ga0068864_100118495 Ga0068864_1001184953 187
11 3300005842 Ga0068858_100002732 Ga0068858_10000273214 187
12 3300006237 Ga0097621_100026420 Ga0097621_1000264203 187
13 3300006358 Ga0068871_100314160 Ga0068871_1003141601 187
14 3300006931 Ga0097620_100000029 Ga0097620_100000029124 187
15 3300009098 Ga0105245_10087878 Ga0105245_100878782 187
16 3300009101 Ga0105247_10007642 Ga0105247_100076427 187
17 3300009174 Ga0105241_10001323 Ga0105241_1000132313 187
18 3300009177 Ga0105248_10449453 Ga0105248_104494531 187
19 3300009545 Ga0105237_10049177 Ga0105237_100491772 187
20 3300011119 Ga0105246_10004737 Ga0105246_100047377 187
21 3300013297 Ga0157378_10040273 Ga0157378_100402735 187
22 3300013306 Ga0163162_10005972 Ga0163162_100059729 187
23 3300013308 Ga0157375_10231367 Ga0157375_102313672 187
24 3300014325 Ga0163163_10018889 Ga0163163_100188896 187
25 3300025900 Ga0207710_10071089 Ga0207710_100710892 187
26 3300025911 Ga0207654_10002630 Ga0207654_100026309 187
27 3300025927 Ga0207687_10151400 Ga0207687_101514002 187
28 3300025931 Ga0207644_10177111 Ga0207644_101771112 187
29 3300025941 Ga0207711_10306881 Ga0207711_103068812 187
30 3300025942 Ga0207689_10006726 Ga0207689_100067268 187
31 3300026035 Ga0207703_10038962 Ga0207703_100389621 187
32 3300026095 Ga0207676_10042022 Ga0207676_100420223 187
33 3300005834 Ga0068851_10192552 Ga0068851_101925522 197
34 3300005841 Ga0068863_100020422 Ga0068863_1000204226 197
35 3300005843 Ga0068860_100056933 Ga0068860_1000569332 197
36 3300026088 Ga0207641_10001031 Ga0207641_1000103115 197
37 3300028381 Ga0268264_10042593 Ga0268264_100425932 197
38 3300013306 Ga0163162_10672414 Ga0163162_106724141 200
39 3300009093 Ga0105240_10000010 Ga0105240_10000010245 211
40 3300025913 Ga0207695_10000019 Ga0207695_10000019210 211
41 3300053177 Ga0500636_0079061 Ga0500636_0079061_350_1015 211
42 3300009545 Ga0105237_10000317 Ga0105237_1000031747 212
43 3300025914 Ga0207671_10000401 Ga0207671_1000040157 212
44 3300025924 Ga0207694_10560322 Ga0207694_105603221 212
45 3300003320 rootH2_10263229 rootH2_102632293 214
46 3300005336 Ga0070680_100235069 Ga0070680_1002350692 216
47 3300005530 Ga0070679_100027248 Ga0070679_1000272485 216
48 3300009545 Ga0105237_10033768 Ga0105237_100337687 216
49 3300010375 Ga0105239_10002447 Ga0105239_100024474 216
50 3300025913 Ga0207695_10138291 Ga0207695_101382912 216
51 3300025917 Ga0207660_10239864 Ga0207660_102398641 216
52 3300025921 Ga0207652_10018818 Ga0207652_100188185 216
53 3300046528 Ga0495642_0129490 Ga0495642_0129490_178_828 216
54 3300003320 rootH2_10061787 rootH2_100617872 217
55 3300009551 Ga0105238_11290928 Ga0105238_112909281 217
56 3300025272 Ga0209455_1003108 Ga0209455_10031089 217
57 3300028800 Ga0265338_10040587 Ga0265338_100405874 217
58 3300029957 Ga0265324_10018870 Ga0265324_100188702 217
59 3300031240 Ga0265320_10129047 Ga0265320_101290472 217
60 3300031247 Ga0265340_10219072 Ga0265340_102190721 217
61 3300025250 Ga0209026_1000484 Ga0209026_100048413 218
62 iso_pu_bacteria 2852623160 2852626081 218
63 iso_pu_bacteria 2884933994 2884935448 218
64 iso_pu_bacteria 2884933994 2884935468 218
65 3300041463 Ga0451804_0287729 Ga0451804_0287729_11_673 220
66 3300044712 Ga0453684_0034270 Ga0453684_0034270_2745_3416 221
67 3300045051 Ga0451576_0059084 Ga0451576_0059084_3312_3983 221
68 3300045051 Ga0451576_0627583 Ga0451576_0627583_431_1108 221
69 3300002737 JGI25162J39368_1010866 JGI25162J39368_10108662 222
70 3300002772 JGI25164J39214_1001920 JGI25164J39214_10019204 222
71 3300002772 JGI25164J39214_1002702 JGI25164J39214_10027022 222
72 3300003214 JGI25165J46597_1001776 JGI25165J46597_100177610 222
73 3300003214 JGI25165J46597_1002558 JGI25165J46597_10025584 222
74 3300003316 rootH1_10043944 rootH1_100439447 222
75 3300003320 rootH2_10014156 rootH2_1001415619 222
76 3300003320 rootH2_10014156 rootH2_100141567 222
77 3300003320 rootH2_10041573 rootH2_100415735 222
78 3300003323 rootH1_10122433 rootH1_101224333 222
79 3300005327 Ga0070658_10000153 Ga0070658_1000015350 222
80 3300005339 Ga0070660_100295459 Ga0070660_1002954592 222
81 3300005366 Ga0070659_100000352 Ga0070659_10000035218 222
82 3300005366 Ga0070659_100005518 Ga0070659_10000551811 222
83 3300005457 Ga0070662_100711347 Ga0070662_1007113471 222
84 3300005539 Ga0068853_100131307 Ga0068853_1001313072 222
85 3300005563 Ga0068855_100000206 Ga0068855_10000020626 222
86 3300005563 Ga0068855_100002297 Ga0068855_10000229714 222
87 3300005563 Ga0068855_100025998 Ga0068855_1000259985 222
88 3300005577 Ga0068857_100075049 Ga0068857_1000750494 222
89 3300005614 Ga0068856_100004329 Ga0068856_1000043298 222
90 3300005614 Ga0068856_100086828 Ga0068856_1000868284 222
91 3300005614 Ga0068856_100142820 Ga0068856_1001428202 222
92 3300005841 Ga0068863_100191540 Ga0068863_1001915402 222
93 3300009093 Ga0105240_10000082 Ga0105240_10000082157 222
94 3300009093 Ga0105240_10042486 Ga0105240_100424863 222
95 3300009174 Ga0105241_10000937 Ga0105241_1000093721 222
96 3300009174 Ga0105241_10355342 Ga0105241_103553422 222
97 3300009545 Ga0105237_10000801 Ga0105237_1000080110 222
98 3300009545 Ga0105237_10003997 Ga0105237_100039975 222
99 3300009545 Ga0105237_10055161 Ga0105237_100551616 222
100 3300010375 Ga0105239_10001363 Ga0105239_1000136310 222
101 3300013296 Ga0157374_10163955 Ga0157374_101639552 222
102 3300013296 Ga0157374_10471025 Ga0157374_104710251 222
103 3300013308 Ga0157375_10069430 Ga0157375_100694303 222
104 3300025231 Ga0207427_100060 Ga0207427_100060154 222
105 3300025231 Ga0207427_100060 Ga0207427_100060172 222
106 3300025233 Ga0209437_100021 Ga0209437_100021548 222
107 3300025233 Ga0209437_100021 Ga0209437_100021566 222
108 3300025250 Ga0209026_1002963 Ga0209026_10029636 222
109 3300025261 Ga0209233_1000035 Ga0209233_100003571 222
110 3300025261 Ga0209233_1000035 Ga0209233_100003589 222
111 3300025261 Ga0209233_1002794 Ga0209233_10027944 222
112 3300025909 Ga0207705_10000108 Ga0207705_1000010862 222
113 3300025911 Ga0207654_10009966 Ga0207654_100099665 222
114 3300025913 Ga0207695_10000053 Ga0207695_10000053194 222
115 3300025913 Ga0207695_10140443 Ga0207695_101404432 222
116 3300025914 Ga0207671_10003363 Ga0207671_100033639 222
117 3300025914 Ga0207671_10133133 Ga0207671_101331332 222
118 3300025932 Ga0207690_10004237 Ga0207690_100042379 222
119 3300025932 Ga0207690_10007268 Ga0207690_100072688 222
120 3300025949 Ga0207667_10000009 Ga0207667_1000000999 222
121 3300025949 Ga0207667_10034849 Ga0207667_100348493 222
122 3300025949 Ga0207667_10139510 Ga0207667_101395102 222
123 3300026078 Ga0207702_10026453 Ga0207702_100264537 222
124 3300026078 Ga0207702_10208379 Ga0207702_102083792 222
125 3300026116 Ga0207674_10094477 Ga0207674_100944772 222
126 3300031548 Ga0307408_100000719 Ga0307408_10000071913 222
127 3300031548 Ga0307408_100000719 Ga0307408_10000071914 222
128 3300031548 Ga0307408_100004527 Ga0307408_1000045272 222
129 3300031995 Ga0307409_100248055 Ga0307409_1002480552 222
130 3300033179 Ga0307507_10007645 Ga0307507_100076451 222
131 3300046459 Ga0495629_0074460 Ga0495629_0074460_231_899 222
132 3300046492 Ga0495585_0000879 Ga0495585_0000879_15664_16332 222
133 3300046507 Ga0495606_0000143 Ga0495606_0000143_57717_58385 222
134 3300046513 Ga0495616_0020355 Ga0495616_0020355_2524_3192 222
135 3300046520 Ga0495637_0120308 Ga0495637_0120308_263_931 222
136 3300046524 Ga0495648_0032865 Ga0495648_0032865_1627_2295 222
137 3300046525 Ga0495663_0037097 Ga0495663_0037097_414_1082 222
138 3300046529 Ga0495652_0207947 Ga0495652_0207947_793_1461 222
139 3300046538 Ga0495609_0003634 Ga0495609_0003634_3231_3968 222
140 3300046538 Ga0495609_0129240 Ga0495609_0129240_200_868 222
141 3300046557 Ga0495622_0030863 Ga0495622_0030863_1521_2189 222
142 3300046616 Ga0495668_0000134 Ga0495668_0000134_90011_90679 222
143 3300046660 Ga0495625_0000009 Ga0495625_0000009_15853_16521 222
144 3300046660 Ga0495625_0002496 Ga0495625_0002496_9372_10040 222
145 3300046683 Ga0495658_0053688 Ga0495658_0053688_970_1638 222
146 3300046694 Ga0495649_0000008 Ga0495649_0000008_232036_232704 222
147 3300046809 Ga0495600_0296779 Ga0495600_0296779_232_900 222
148 3300046810 Ga0495660_0054756 Ga0495660_0054756_398_1135 222
149 3300053123 Ga0500614_078064 Ga0500614_078064_176_844 222
150 2162886007 SwRhRL2b_contig_1663050 SwRhRL2b_0644.00004950 223
151 3300003316 rootH1_10070827 rootH1_100708272 223
152 3300003320 rootH2_10127792 rootH2_101277922 223
153 3300003320 rootH2_10304198 rootH2_103041982 223
154 3300005288 Ga0065714_10002588 Ga0065714_1000258816 223
155 3300005289 Ga0065704_10070140 Ga0065704_10070140459 223
156 3300005356 Ga0070674_100466612 Ga0070674_1004666121 223
157 3300005530 Ga0070679_100056829 Ga0070679_1000568293 223
158 3300005539 Ga0068853_100431407 Ga0068853_1004314072 223
159 3300005539 Ga0068853_100707596 Ga0068853_1007075962 223
160 3300005834 Ga0068851_10399755 Ga0068851_103997551 223
161 3300006353 Ga0075370_10183245 Ga0075370_101832452 223
162 3300009545 Ga0105237_10005818 Ga0105237_1000581811 223
163 3300013102 Ga0157371_10006879 Ga0157371_1000687912 223
164 3300013102 Ga0157371_10023522 Ga0157371_100235223 223
165 3300013307 Ga0157372_10021627 Ga0157372_100216272 223
166 3300014497 Ga0182008_10003011 Ga0182008_100030116 223
167 3300020069 Ga0197907_10842051 Ga0197907_108420512 223
168 3300020078 Ga0206352_10048149 Ga0206352_100481491 223
169 3300020081 Ga0206354_10099768 Ga0206354_100997682 223
170 3300025903 Ga0207680_10000420 Ga0207680_1000042014 223
171 3300025914 Ga0207671_10001364 Ga0207671_1000136415 223
172 3300025914 Ga0207671_10053801 Ga0207671_100538012 223
173 3300025937 Ga0207669_10515835 Ga0207669_105158351 223
174 3300031251 Ga0265327_10001743 Ga0265327_1000174313 223
175 3300031731 Ga0307405_10059644 Ga0307405_100596442 223
176 3300031911 Ga0307412_10042385 Ga0307412_100423854 223
177 3300049571 Ga0501034_0419900 Ga0501034_0419900_443_1117 223
178 3300049674 Ga0501242_011229 Ga0501242_011229_106_780 223

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04972

BON

BON domain

101

169

0.98

PF04972

BON

BON domain

26

93

0.96

PF04972

BON

BON domain

172

240

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cq2-assembly1.cif.gz_B structure of the dtdp-4-keto-l-rhamnose reductase related protein (other form) from thermus thermophilus hb8 0.7405 82 144
2cu6-assembly1.cif.gz_A crystal structure of the dtdp-4-keto-l-rhamnose reductase-related protein from thermus thermophilus hb8 0.7307 150 216
6j1f-assembly2.cif.gz_B crystal structure of hypx from aquifex aeolicus in complex with tetrahydrofolic acid 0.7142 25 63
6j1h-assembly2.cif.gz_B crystal structure of hypx from aquifex aeolicus, q15a-r131a-s194a-q195a-n306a-r542a variant 0.6989 25 63
6j1g-assembly1.cif.gz_A crystal structure of hypx from aquifex aeolicus, r9a-q15a-r131a-r542a variant 0.6875 25 67
ID Description Score Start End Superfamily
af_P0AFH8_57_122_3.30.1340.30 Alpha Beta;2-Layer Sandwich;Histidine-containing Protein; Chain: A;; 0.9851 6 70 3.30.1340.30
af_P0AFH8_137_201_3.30.1340.30 Alpha Beta;2-Layer Sandwich;Histidine-containing Protein; Chain: A;; 0.9745 7 70 3.30.1340.30
af_P64596_124_191_3.30.70.330 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain 0.9664 3 70 3.30.70.330
af_P64596_46_115_3.30.1340.30 Alpha Beta;2-Layer Sandwich;Histidine-containing Protein; Chain: A;; 0.9655 150 212 3.30.1340.30
af_P0AFH8_57_122_3.30.1340.30 Alpha Beta;2-Layer Sandwich;Histidine-containing Protein; Chain: A;; 0.9561 6 70 3.30.1340.30
ID Description Score Start End GO Terms
AF-A0A2U2I4W2-F1-model_v4 BON domain-containing protein 0.9998 4 70
AF-A0A4Y9T6E7-F1-model_v4 BON domain-containing protein 0.9996 3 70
AF-A0A1G8F0W3-F1-model_v4 BON domain-containing protein 0.9982 4 70
AF-A0A1M5Q089-F1-model_v4 BON domain-containing protein 0.9966 4 70
AF-A0A841GTJ8-F1-model_v4 BON domain-containing protein 0.9957 3 69

Feature Viewer

pLDDT pTM Quality
84.37 0.75 High
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Predicted Structure (AlphaFold2)

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