F272519

General Info

Members Datasets Scaffolds Average Seq Length
178 148 356 389

Family's Representative Sequence

Representative Sequence 3300046455|Ga0495603_0021545|Ga0495603_0021545_710_2008
Length 432
Sequence VPGRHAGYGKQVNAPGXXXXQDGGTVGEQSWEDLVSGGRRHIGAPERRARLAAGQRLAPGARAGSAEEVAGSLVALHGTDPATVYLAVGARLRDPSKTVADVERALYTDRSLVRMHGMRHTVFVFPAALTAVVHASTGVAVAARERASFVRHLEAGSEHDAAWLADVEAGTLAAIGARGEATAAELAEDEPRLRTQLLYAPGKKYEAWQSISTRLLRVLGMEGRVVRGRPRGSWTSSQFRWALTPAHPELPAAEAQSELLRHWLGSCGPATEADLKWWTGWKVTDVRRALTAVGAVEVELDEGAGFVLPDAVEPVTADAVPWAALLPALDPSAMGWQQRDWYLPQELRAPLFDGAGNIGPTVWWDGRIAGGWAQGTDGVVRWRLLADVGRDAAAAVEAEAARLQEWVGEARVTPRFRTPLEKELAGPAPAKK

Samples

Sample ID Description Type Environment
1 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
4 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
5 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
7 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
8 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
9 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
10 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
11 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
12 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
13 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
21 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
22 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
23 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
24 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
25 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
26 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
27 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
28 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
29 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
30 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
31 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
32 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
33 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
34 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
35 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
36 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
37 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
38 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
39 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
40 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
41 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
42 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
43 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
44 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
45 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
46 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
47 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
48 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
49 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
50 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
51 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
52 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
53 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
54 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
55 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
56 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
57 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
58 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
59 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
60 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
61 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
62 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
63 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
64 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
65 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
66 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
67 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
68 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
71 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
72 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
73 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
74 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
75 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
76 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
77 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
78 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
79 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
83 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
84 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
85 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
86 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
87 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
88 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
94 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
95 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
96 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
97 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
98 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
99 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
100 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
101 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
102 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
103 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
104 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
105 2643221548 Streptomyces sp. Root55 Isolate Unclassified
106 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
107 2643221647 Streptomyces sp. Root369 Isolate Unclassified
108 2643221670 Streptomyces sp. Root431 Isolate Unclassified
109 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
110 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
111 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
112 2643221714 Streptomyces sp. Root264 Isolate Unclassified
113 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
114 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
115 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
116 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
117 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
118 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
119 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
120 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
121 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
122 2862574272 Streptomyces sp. AcE210 Isolate Nodule
123 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
124 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
125 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
126 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
127 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
128 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
129 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
130 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
131 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
132 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
133 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
134 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
135 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
136 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
137 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
138 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
139 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
140 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
141 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
142 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
143 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
144 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
145 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
146 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
147 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
148 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.91
Metatranscriptomes 0.56
Isolates 27.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.12
Nodule 1.12
Rhizoplane 0.56
Rhizosphere 80.34
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495603_0021545 3300046455 Bacteria 3903
2 Ga0006562J51391_1122379 3300003578 Bacteria 3686
3 Ga0068855_100007872 3300005563 Bacteria 12876
4 Ga0068852_100003890 3300005616 Bacteria 10492
5 Ga0081539_10000433 3300005985 Bacteria 89118
6 Ga0105240_10049424 3300009093 Bacteria 5308
7 Ga0105241_10002988 3300009174 Bacteria 12627
8 Ga0105238_10029069 3300009551 Bacteria 5631
9 Ga0182008_10000719 3300014497 Bacteria 23643
10 Ga0182007_10002380 3300015262 Bacteria 9401
11 Ga0183367_1009 3300015688 Bacteria 484598
12 Ga0207647_10001288 3300025904 Bacteria 19277
13 Ga0207654_10013242 3300025911 Bacteria 4239
14 Ga0207695_10002634 3300025913 Bacteria 26254
15 Ga0207671_10000313 3300025914 Bacteria 71480
16 Ga0207694_10002394 3300025924 Bacteria 15342
17 Ga0207667_10031447 3300025949 Bacteria 5730
18 Ga0207678_10016925 3300026067 Bacteria 6401
19 Ga0207698_10006167 3300026142 Bacteria 7462
20 Ga0307517_10008284 3300028786 Bacteria 14939
21 Ga0307515_10002305 3300028794 Bacteria 41711
22 Ga0307511_10000609 3300030521 Bacteria 38325
23 Ga0307509_10026746 3300031507 Bacteria 6429
24 Ga0307509_10064740 3300031507 Bacteria 3844
25 Ga0307508_10008468 3300031616 Bacteria 9505
26 Ga0307508_10041518 3300031616 Bacteria 4128
27 Ga0307508_10196028 3300031616 Bacteria 1621
28 Ga0307514_10147791 3300031649 Bacteria 1584
29 Ga0307518_10052167 3300031838 Bacteria 2971
30 Ga0307518_10167068 3300031838 Bacteria 1504
31 Ga0307510_10016735 3300033180 Bacteria 8653
32 Ga0307510_10046169 3300033180 Bacteria 4688
33 Ga0439436_0008080 3300041404 Bacteria 3234
34 Ga0439439_0002458 3300041406 Bacteria 3942
35 Ga0439433_0003338 3300041999 Bacteria 3440
36 Ga0439455_0000923 3300042012 Bacteria 4574
37 Ga0439457_001584 3300042014 Bacteria 6797
38 Ga0450903_000164 3300042138 Bacteria 14582
39 Ga0439458_0000645 3300042157 Bacteria 9004
40 Ga0466972_0074208 3300044658 Bacteria 1621
41 Ga0466965_0002288 3300044683 Bacteria 8071
42 Ga0466966_0024126 3300044684 Bacteria 3980
43 Ga0466961_0001367 3300044693 Bacteria 15056
44 Ga0466963_0026775 3300044694 Bacteria 3689
45 Ga0466971_0013264 3300044719 Bacteria 3616
46 Ga0466970_0002188 3300044765 Bacteria 9445
47 Ga0466957_0004300 3300044842 Bacteria 7905
48 Ga0466960_0011382 3300044901 Bacteria 3721
49 Ga0466958_0180447 3300045836 Bacteria 1339
50 Ga0466967_0039304 3300045976 Bacteria 4066
51 Ga0495592_0038945 3300046454 Bacteria 3573
52 Ga0495592_0155473 3300046454 Bacteria 1578
53 Ga0495603_0005942 3300046455 Bacteria 7298
54 Ga0495603_0064617 3300046455 Bacteria 2157
55 Ga0495629_0004750 3300046459 Bacteria 10179
56 Ga0495629_0005303 3300046459 Bacteria 9637
57 Ga0495629_0044833 3300046459 Bacteria 3103
58 Ga0495629_0062541 3300046459 Bacteria 2600
59 Ga0495651_0002083 3300046462 Bacteria 15406
60 Ga0495651_0221697 3300046462 Bacteria 1308
61 Ga0495662_0003129 3300046476 Bacteria 8347
62 Ga0495662_0065054 3300046476 Bacteria 1762
63 Ga0495664_0115324 3300046477 Bacteria 1623
64 Ga0495585_0027128 3300046492 Bacteria 3270
65 Ga0495594_0000431 3300046499 Bacteria 21108
66 Ga0495594_0014903 3300046499 Bacteria 4080
67 Ga0495594_0136163 3300046499 Bacteria 1392
68 Ga0495596_0023338 3300046500 Bacteria 2511
69 Ga0495607_0093928 3300046501 Bacteria 1619
70 Ga0495616_0048987 3300046513 Bacteria 2120
71 Ga0495628_0081916 3300046516 Bacteria 2506
72 Ga0495643_0002933 3300046522 Bacteria 12926
73 Ga0495648_0099818 3300046524 Bacteria 1605
74 Ga0495666_0062558 3300046526 Bacteria 1777
75 Ga0495652_0005392 3300046529 Bacteria 12051
76 Ga0495640_0000167 3300046533 Bacteria 42901
77 Ga0495622_0003921 3300046557 Bacteria 6950
78 Ga0495622_0144897 3300046557 Bacteria 1077
79 Ga0495633_0088162 3300046558 Bacteria 1443
80 Ga0495667_0043373 3300046559 Bacteria 2981
81 Ga0495668_0027846 3300046616 Bacteria 3201
82 Ga0495634_0069537 3300046642 Bacteria 2322
83 Ga0495611_0036589 3300046648 Bacteria 2179
84 Ga0495611_0067541 3300046648 Bacteria 1631
85 Ga0495625_0011990 3300046660 Bacteria 7036
86 Ga0495625_0066500 3300046660 Bacteria 2539
87 Ga0495635_0037908 3300046663 Bacteria 3337
88 Ga0495588_0010317 3300046674 Bacteria 4341
89 Ga0495588_0015360 3300046674 Bacteria 3683
90 Ga0495588_0055918 3300046674 Bacteria 2037
91 Ga0495657_0091589 3300046675 Bacteria 1949
92 Ga0495657_0116544 3300046675 Bacteria 1686
93 Ga0495613_0029280 3300046689 Bacteria 4095
94 Ga0495613_0160155 3300046689 Bacteria 1601
95 Ga0495624_0046305 3300046690 Bacteria 2766
96 Ga0495624_0062695 3300046690 Bacteria 2325
97 Ga0495670_0138856 3300046691 Bacteria 1270
98 Ga0495589_0023245 3300046794 Bacteria 3160
99 Ga0495589_0060143 3300046794 Bacteria 1866
100 Ga0495589_0111252 3300046794 Bacteria 1322
101 Ga0495600_0048533 3300046809 Bacteria 2769
102 Ga0495660_0082187 3300046810 Bacteria 1687
103 Ga0495604_0086269 3300047317 Bacteria 2340
104 Ga0495636_0039421 3300047318 Bacteria 1956
105 Ga0495676_0009059 3300047321 Bacteria 9081
106 Ga0495676_0018149 3300047321 Bacteria 6205
107 Ga0495676_0026448 3300047321 Bacteria 4994
108 Ga0495680_0118910 3300047322 Bacteria 1952
109 Ga0495687_003611 3300047443 Bacteria 11057
110 Ga0495685_002433 3300047447 Bacteria 5831
111 Ga0495685_003079 3300047447 Bacteria 5293
112 Ga0495685_003862 3300047447 Bacteria 4807
113 Ga0495681_0000943 3300047470 Bacteria 22360
114 Ga0495684_0110735 3300047471 Bacteria 2072
115 Ga0495593_0022019 3300047673 Bacteria 3556
116 Ga0495614_0001455 3300048089 Bacteria 10234
117 Ga0495614_0002005 3300048089 Bacteria 8957
118 Ga0496109_0024158 3300048912 Bacteria 5400
119 Ga0501033_0083261 3300049570 Bacteria 2345
120 Ga0501038_0069613 3300049574 Bacteria 2989
121 Ga0501035_0083966 3300049822 Bacteria 2809
122 Ga0501044_0009569 3300049823 Bacteria 10551
123 Ga0501045_0272944 3300049824 Bacteria 1259
124 nmdc:mga0yw44_67860_c1 3300050492 Bacteria 2205
125 nmdc:mga07m45_81952_c1 3300050496 Bacteria 1531
126 Ga0495601_0070312 3300053077 Bacteria 2234
127 Ga0495612_0064128 3300053078 Bacteria 1524
128 Ga0495619_0036355 3300053085 Bacteria 3207
129 Ga0466962_0002436 3300061719 Bacteria 8824
130 2585298483 2582581312 Bacteria 7308206
131 2585306917 2582581313 Bacteria 10042643
132 2585320895 2582581314 Bacteria 11452267
133 2616694374 2616644814 Bacteria 11555299
134 2616904831 2616644941 Bacteria 8510691
135 2643763135 2643221548 Bacteria 8053412
136 2643947777 2643221587 Bacteria 7586415
137 2644265446 2643221647 Bacteria 10741251
138 2644390782 2643221670 Bacteria 6497041
139 2644433642 2643221677 Bacteria 7584031
140 2644435872 2643221678 Bacteria 9540101
141 2644463995 2643221682 Bacteria 6743283
142 2644632242 2643221714 Bacteria 9015452
143 2676487971 2675903060 Bacteria 10051191
144 2786669082 2786546132 Bacteria 10419719
145 2808840683 2808606359 Bacteria 9866990
146 2808919275 2808606375 Bacteria 9466072
147 2811845750 2808606982 Bacteria 7791042
148 2812359498 2811994879 Bacteria 9313447
149 2819697304 2818991463 Bacteria 7948711
150 2819739499 2818991472 Bacteria 10089953
151 2852642916 2852635781 Bacteria 8251373
152 2862582811 2862574272 Bacteria 10567477
153 2877682514 2877676314 Bacteria 9512378
154 2912721538 2912715099 Bacteria 9460473
155 2918505273 2918501144 Bacteria 8668083
156 2919468234 2919468124 Bacteria 9133025
157 2946066420 2946064051 Bacteria 8957905
158 2946074675 2946072368 Bacteria 8999607
159 2947230957 2947224130 Bacteria 9938529
160 2954387715 2954380949 Bacteria 10050426
161 2954675381 2954673503 Bacteria 9685905
162 2954688751 2954682443 Bacteria 9862841
163 2954698525 2954691527 Bacteria 10720516
164 2954703699 2954701450 Bacteria 10834262
165 2954717498 2954711539 Bacteria 10867210
166 2954727461 2954721474 Bacteria 10456478
167 2954734339 2954731030 Bacteria 10243860
168 2954746358 2954740390 Bacteria 10229294
169 2954753222 2954749733 Bacteria 10366972
170 2954765471 2954759201 Bacteria 9358192
171 2966602104 2966598605 Bacteria 7676064
172 2997600440 2997600082 Bacteria 9896405
173 3006325085 3006321560 Bacteria 8247479
174 8008562200 8008558824 Bacteria 10610750
175 8008579984 8008574985 Bacteria 7815457
176 8025484299 8025478263 Bacteria 8209203
177 8056451665 8056447290 Bacteria 7680491
178 8056669663 8056667051 Bacteria 6953971
179 Ga0495603_0021545
180 Ga0006562J51391_1122379
181 Ga0068855_100007872
182 Ga0068852_100003890
183 Ga0081539_10000433
184 Ga0105240_10049424
185 Ga0105241_10002988
186 Ga0105238_10029069
187 Ga0182008_10000719
188 Ga0182007_10002380
189 Ga0183367_1009
190 Ga0207647_10001288
191 Ga0207654_10013242
192 Ga0207695_10002634
193 Ga0207671_10000313
194 Ga0207694_10002394
195 Ga0207667_10031447
196 Ga0207678_10016925
197 Ga0207698_10006167
198 Ga0307517_10008284
199 Ga0307515_10002305
200 Ga0307511_10000609
201 Ga0307509_10026746
202 Ga0307509_10064740
203 Ga0307508_10008468
204 Ga0307508_10041518
205 Ga0307508_10196028
206 Ga0307514_10147791
207 Ga0307518_10052167
208 Ga0307518_10167068
209 Ga0307510_10016735
210 Ga0307510_10046169
211 Ga0439436_0008080
212 Ga0439439_0002458
213 Ga0439433_0003338
214 Ga0439455_0000923
215 Ga0439457_001584
216 Ga0450903_000164
217 Ga0439458_0000645
218 Ga0466972_0074208
219 Ga0466965_0002288
220 Ga0466966_0024126
221 Ga0466961_0001367
222 Ga0466963_0026775
223 Ga0466971_0013264
224 Ga0466970_0002188
225 Ga0466957_0004300
226 Ga0466960_0011382
227 Ga0466958_0180447
228 Ga0466967_0039304
229 Ga0495592_0038945
230 Ga0495592_0155473
231 Ga0495603_0005942
232 Ga0495603_0064617
233 Ga0495629_0004750
234 Ga0495629_0005303
235 Ga0495629_0044833
236 Ga0495629_0062541
237 Ga0495651_0002083
238 Ga0495651_0221697
239 Ga0495662_0003129
240 Ga0495662_0065054
241 Ga0495664_0115324
242 Ga0495585_0027128
243 Ga0495594_0000431
244 Ga0495594_0014903
245 Ga0495594_0136163
246 Ga0495596_0023338
247 Ga0495607_0093928
248 Ga0495616_0048987
249 Ga0495628_0081916
250 Ga0495643_0002933
251 Ga0495648_0099818
252 Ga0495666_0062558
253 Ga0495652_0005392
254 Ga0495640_0000167
255 Ga0495622_0003921
256 Ga0495622_0144897
257 Ga0495633_0088162
258 Ga0495667_0043373
259 Ga0495668_0027846
260 Ga0495634_0069537
261 Ga0495611_0036589
262 Ga0495611_0067541
263 Ga0495625_0011990
264 Ga0495625_0066500
265 Ga0495635_0037908
266 Ga0495588_0010317
267 Ga0495588_0015360
268 Ga0495588_0055918
269 Ga0495657_0091589
270 Ga0495657_0116544
271 Ga0495613_0029280
272 Ga0495613_0160155
273 Ga0495624_0046305
274 Ga0495624_0062695
275 Ga0495670_0138856
276 Ga0495589_0023245
277 Ga0495589_0060143
278 Ga0495589_0111252
279 Ga0495600_0048533
280 Ga0495660_0082187
281 Ga0495604_0086269
282 Ga0495636_0039421
283 Ga0495676_0009059
284 Ga0495676_0018149
285 Ga0495676_0026448
286 Ga0495680_0118910
287 Ga0495687_003611
288 Ga0495685_002433
289 Ga0495685_003079
290 Ga0495685_003862
291 Ga0495681_0000943
292 Ga0495684_0110735
293 Ga0495593_0022019
294 Ga0495614_0001455
295 Ga0495614_0002005
296 Ga0496109_0024158
297 Ga0501033_0083261
298 Ga0501038_0069613
299 Ga0501035_0083966
300 Ga0501044_0009569
301 Ga0501045_0272944
302 nmdc:mga0yw44_67860_c1
303 nmdc:mga07m45_81952_c1
304 Ga0495601_0070312
305 Ga0495612_0064128
306 Ga0495619_0036355
307 Ga0466962_0002436
308 2585298483
309 2585306917
310 2585320895
311 2616694374
312 2616904831
313 2643763135
314 2643947777
315 2644265446
316 2644390782
317 2644433642
318 2644435872
319 2644463995
320 2644632242
321 2676487971
322 2786669082
323 2808840683
324 2808919275
325 2811845750
326 2812359498
327 2819697304
328 2819739499
329 2852642916
330 2862582811
331 2877682514
332 2912721538
333 2918505273
334 2919468234
335 2946066420
336 2946074675
337 2947230957
338 2954387715
339 2954675381
340 2954688751
341 2954698525
342 2954703699
343 2954717498
344 2954727461
345 2954734339
346 2954746358
347 2954753222
348 2954765471
349 2966602104
350 2997600440
351 3006325085
352 8008562200
353 8008579984
354 8025484299
355 8056451665
356 8056669663

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06224

AlkZ-like

DNA glycosylase AlkZ-like

70

406

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3f23-assembly1.cif.gz_A crystal structure of zalpha in complex with d(cggccg) 0.8409 218 274
5j6x-assembly2.cif.gz_B crystal structure of the apo-zalpha of zebrafish pkz 0.8336 130 211
4rs8-assembly1.cif.gz_B apo structure of novel pnob8 plasmid centromere binding protein 0.8264 133 210
4lb5-assembly1.cif.gz_B crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.8214 131 211
7wqu-assembly1.cif.gz_B feoc from klebsiella pneumoniae 0.7996 223 274
ID Description Score Start End Superfamily
4a12C01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8589 219 260 1.10.10.10
4a12D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8575 220 260 1.10.10.10
4a0zA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8569 219 260 1.10.10.10
4a0yA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8487 220 260 1.10.10.10
5j6xB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8336 130 211 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A5N8VU23-F1-model_v4 Winged helix DNA-binding domain-containing protein 0.9909 1 343 GO:0003677
AF-A0A2W2KAQ9-F1-model_v4 Winged helix DNA-binding domain-containing protein 0.9898 1 250
AF-A0A5N8VU23-F1-model_v4 Winged helix DNA-binding domain-containing protein 0.988 1 343 GO:0003677
AF-A0A3R8RH73-F1-model_v4 Winged helix DNA-binding domain-containing protein 0.9867 1 293 GO:0003677
AF-A0A3R8RH73-F1-model_v4 Winged helix DNA-binding domain-containing protein 0.9834 1 293 GO:0003677

Map