F272209

General Info

Members Datasets Scaffolds Average Seq Length
178 96 356 240

Family's Representative Sequence

Representative Sequence 3300028556|Ga0265337_1006783|Ga0265337_10067832
Length 277
Sequence MSVTRLTQREGMSGRGMVPCRLSGLLFAPKRLIFFHTDMVSAFAELKSAAIVSTLRRCQIFAGLAPEDLNAIAAITLVKSLEKGDYLFREGAPAQGFYIAQRGSINVHRVNAAGKEQIIHVFRAGESFAEAALATSSGYPADARALESSQVLLVEKAGFLALLRRQPELALRMLGSMSLHLRTLIAQLEDLTLKDVETRLANWLIKRCPNPESTQPVIIELKTTKRVLAAELGTVSETFSRTLAKFRQQKLVTVKGKTLSVLCPLKLRELLRRNLGE

Samples

Sample ID Description Type Environment
1 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
25 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
26 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
27 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
35 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
36 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
37 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
38 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
39 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
40 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
45 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
46 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
47 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
48 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
49 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
50 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
51 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
52 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
53 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
54 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
55 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
56 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
59 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
60 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
61 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
62 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
63 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
64 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
65 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
66 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
67 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
68 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
69 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
70 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
71 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
72 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
73 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
74 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
75 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
76 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
79 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
80 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
81 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
82 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
83 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
84 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
85 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
86 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
92 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
93 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
94 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
96 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.56
Nodule 0
Rhizoplane 0
Rhizosphere 98.88
Stem 0
Stem Tuber 0
Unclassified 34.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265337_1006783 3300028556 Bacteria 4361
2 rootH1_10223309 3300003323 Bacteria 2725
3 Ga0070658_10289809 3300005327 Bacteria 1395
4 Ga0070683_100351449 3300005329 Bacteria 1404
5 Ga0070660_100066784 3300005339 Bacteria 2801
6 Ga0070660_100106615 3300005339 Bacteria 2226
7 Ga0070691_10064727 3300005341 Bacteria 1764
8 Ga0070714_100855838 3300005435 Unclassified 882
9 Ga0070705_100114188 3300005440 Bacteria 1732
10 Ga0070694_100021646 3300005444 Unclassified 4112
11 Ga0070681_10026490 3300005458 Bacteria 5826
12 Ga0070681_10097169 3300005458 Bacteria 2893
13 Ga0070685_10342488 3300005466 Unclassified 1020
14 Ga0070707_100266745 3300005468 Bacteria 1665
15 Ga0070686_100002764 3300005544 Bacteria 9666
16 Ga0070704_100001026 3300005549 Bacteria 14372
17 Ga0068855_100029758 3300005563 Bacteria 6530
18 Ga0068855_100038334 3300005563 Bacteria 5694
19 Ga0068855_100066051 3300005563 Unclassified 4217
20 Ga0068855_100309822 3300005563 Unclassified 1747
21 Ga0068856_100000588 3300005614 Bacteria 39823
22 Ga0068856_100001496 3300005614 Bacteria 24454
23 Ga0068856_100058856 3300005614 Bacteria 3795
24 Ga0068859_100116533 3300005617 Bacteria 2736
25 Ga0068859_100203599 3300005617 Bacteria 2064
26 Ga0068859_100958753 3300005617 Unclassified 938
27 Ga0068864_100509204 3300005618 Bacteria 1159
28 Ga0097621_100430229 3300006237 Unclassified 1186
29 Ga0068871_100166393 3300006358 Unclassified 1888
30 Ga0068871_100599992 3300006358 Bacteria 1001
31 Ga0097620_100116534 3300006931 Bacteria 2736
32 Ga0097620_100203598 3300006931 Bacteria 2064
33 Ga0097620_100958973 3300006931 Unclassified 938
34 Ga0105240_10070215 3300009093 Bacteria 4334
35 Ga0105240_10087793 3300009093 Unclassified 3807
36 Ga0105238_10010348 3300009551 Bacteria 9359
37 Ga0105238_10029842 3300009551 Bacteria 5553
38 Ga0105238_10537776 3300009551 Bacteria 1172
39 Ga0105238_10842175 3300009551 Unclassified 934
40 Ga0157370_10028492 3300013104 Bacteria 5492
41 Ga0157374_10042929 3300013296 Bacteria 4174
42 Ga0163163_10000027 3300014325 Bacteria 176970
43 Ga0207707_10020335 3300025912 Bacteria 5796
44 Ga0207707_10114684 3300025912 Bacteria 2355
45 Ga0207695_10104861 3300025913 Bacteria 2815
46 Ga0207657_10074881 3300025919 Bacteria 2858
47 Ga0207694_10016727 3300025924 Bacteria 5544
48 Ga0207694_10037894 3300025924 Unclassified 3705
49 Ga0207694_10307641 3300025924 Bacteria 1306
50 Ga0207667_10019471 3300025949 Bacteria 7574
51 Ga0207667_10033222 3300025949 Bacteria 5551
52 Ga0207667_10199964 3300025949 Unclassified 2050
53 Ga0207667_10209117 3300025949 Unclassified 2000
54 Ga0207702_10000683 3300026078 Bacteria 36829
55 Ga0207702_10001413 3300026078 Bacteria 23980
56 Ga0207702_10138764 3300026078 Unclassified 2197
57 Ga0207702_10461460 3300026078 Unclassified 1234
58 Ga0207676_10067200 3300026095 Bacteria 2863
59 Ga0265326_10004364 3300028558 Bacteria 4537
60 Ga0265326_10061534 3300028558 Bacteria 1062
61 Ga0265334_10008658 3300028573 Bacteria 4319
62 Ga0265338_10000943 3300028800 Bacteria 49004
63 Ga0265338_10002795 3300028800 Bacteria 25520
64 Ga0265338_10003952 3300028800 Bacteria 20423
65 Ga0265338_10019476 3300028800 Bacteria 7195
66 Ga0265338_10046636 3300028800 Bacteria 3969
67 Ga0265338_10069703 3300028800 Unclassified 3019
68 Ga0265338_10380868 3300028800 Bacteria 1009
69 Ga0265324_10000672 3300029957 Bacteria 23043
70 Ga0265324_10005108 3300029957 Bacteria 5744
71 Ga0265324_10016589 3300029957 Bacteria 2686
72 Ga0265324_10026385 3300029957 Unclassified 2056
73 Ga0265324_10053291 3300029957 Unclassified 1389
74 Ga0265324_10058340 3300029957 Bacteria 1320
75 Ga0265329_10007347 3300031242 Bacteria 4274
76 Ga0265329_10032120 3300031242 Unclassified 1701
77 Ga0265339_10038689 3300031249 Bacteria 2659
78 Ga0265339_10113922 3300031249 Unclassified 1396
79 Ga0265327_10003820 3300031251 Bacteria 13923
80 Ga0265327_10011012 3300031251 Bacteria 6289
81 Ga0265316_10198384 3300031344 Unclassified 1489
82 Ga0265314_10000073 3300031711 Bacteria 148691
83 Ga0265314_10000646 3300031711 Bacteria 42731
84 Ga0265314_10027551 3300031711 Bacteria 4254
85 Ga0316576_10301761 3300031727 Bacteria 1197
86 Ga0373951_0033714 3300035091 Unclassified 1214
87 Ga0373945_0059267 3300035116 Bacteria 1425
88 Ga0373953_0194552 3300035117 Unclassified 876
89 Ga0373954_0073743 3300035118 Unclassified 1624
90 Ga0373956_0055862 3300035119 Unclassified 1781
91 Ga0373955_0286307 3300035172 Unclassified 992
92 Ga0316574_0111030 3300035398 Unclassified 1758
93 Ga0373935_0033160 3300035692 Bacteria 3213
94 Ga0373933_0046453 3300035724 Unclassified 2579
95 Ga0373947_0036512 3300035725 Unclassified 2914
96 Ga0373937_0016450 3300036401 Bacteria 6571
97 Ga0373937_0303551 3300036401 Bacteria 1509
98 Ga0316584_0523855 3300036712 Bacteria 830
99 Ga0373925_0016704 3300037068 Bacteria 5315
100 Ga0451577_0019741 3300042876 Bacteria 6194
101 Ga0451577_0089485 3300042876 Bacteria 2747
102 Ga0451577_0217807 3300042876 Unclassified 1725
103 Ga0451577_0349842 3300042876 Bacteria 1341
104 Ga0453684_0005644 3300044712 Bacteria 24604
105 Ga0453684_0156287 3300044712 Unclassified 2703
106 Ga0453684_0506647 3300044712 Bacteria 1336
107 Ga0451576_0098256 3300045051 Unclassified 3045
108 Ga0451576_0103933 3300045051 Bacteria 2955
109 Ga0451576_0106948 3300045051 Bacteria 2911
110 Ga0451576_0110358 3300045051 Bacteria 2863
111 Ga0451576_0227741 3300045051 Unclassified 1946
112 Ga0451576_0285092 3300045051 Bacteria 1727
113 Ga0451576_0565033 3300045051 Unclassified 1195
114 Ga0451576_0727189 3300045051 Bacteria 1043
115 Ga0451576_1015016 3300045051 Unclassified 869
116 Ga0495629_0297804 3300046459 Unclassified 1105
117 Ga0495582_0020048 3300046473 Bacteria 3658
118 Ga0495662_0047974 3300046476 Unclassified 2062
119 Ga0495618_0042705 3300046514 Bacteria 2859
120 Ga0495628_0101760 3300046516 Unclassified 2217
121 Ga0495630_0000022 3300046517 Bacteria 172932
122 Ga0495630_0056943 3300046517 Bacteria 2929
123 Ga0495630_0242805 3300046517 Bacteria 1376
124 Ga0495630_0287033 3300046517 Bacteria 1257
125 Ga0495630_0389379 3300046517 Bacteria 1068
126 Ga0495666_0008107 3300046526 Bacteria 5266
127 Ga0495666_0027277 3300046526 Bacteria 2812
128 Ga0495652_0105041 3300046529 Unclassified 2283
129 Ga0495640_0118612 3300046533 Unclassified 1722
130 Ga0495640_0186925 3300046533 Bacteria 1318
131 Ga0495586_0000010 3300046535 Bacteria 143135
132 Ga0495586_0004229 3300046535 Bacteria 7690
133 Ga0495586_0042639 3300046535 Bacteria 2443
134 Ga0495645_0088892 3300046543 Unclassified 2209
135 Ga0495645_0165967 3300046543 Bacteria 1523
136 Ga0495645_0220947 3300046543 Unclassified 1274
137 Ga0495667_0145362 3300046559 Unclassified 1527
138 Ga0495667_0231038 3300046559 Bacteria 1179
139 Ga0495634_0005921 3300046642 Bacteria 9340
140 Ga0495634_0024569 3300046642 Bacteria 4226
141 Ga0495599_0028586 3300046678 Unclassified 3495
142 Ga0495647_0225122 3300046681 Unclassified 829
143 Ga0495658_0010593 3300046683 Bacteria 4614
144 Ga0495658_0048840 3300046683 Unclassified 2388
145 Ga0495669_0152432 3300046684 Viruses 1094
146 Ga0495613_0195738 3300046689 Unclassified 1427
147 Ga0495624_0039810 3300046690 Bacteria 3013
148 Ga0495600_0064057 3300046809 Bacteria 2403
149 Ga0495581_0223405 3300047315 Unclassified 1101
150 Ga0495674_0000401 3300047319 Bacteria 38833
151 Ga0495674_0010471 3300047319 Bacteria 8779
152 Ga0495676_0015413 3300047321 Bacteria 6807
153 Ga0495676_0232158 3300047321 Bacteria 1267
154 Ga0495680_0108128 3300047322 Unclassified 2064
155 Ga0495680_0220312 3300047322 Viruses 1355
156 Ga0495675_0032762 3300047444 Bacteria 3315
157 Ga0495675_0117585 3300047444 Unclassified 1657
158 Ga0495684_0091597 3300047471 Unclassified 2303
159 Ga0501031_0000285 3300049568 Bacteria 28615
160 Ga0501031_0313055 3300049568 Bacteria 1017
161 Ga0501032_0070092 3300049569 Bacteria 2338
162 Ga0501032_0079673 3300049569 Unclassified 2180
163 Ga0501032_0080727 3300049569 Unclassified 2164
164 Ga0501033_0005072 3300049570 Bacteria 10479
165 Ga0501033_0066713 3300049570 Unclassified 2646
166 Ga0501033_0136698 3300049570 Unclassified 1773
167 Ga0501036_0423637 3300049572 Unclassified 1110
168 Ga0501046_0198384 3300049580 Unclassified 1494
169 Ga0501070_0418996 3300049586 Unclassified 1082
170 Ga0501243_001369 3300049675 Bacteria 3489
171 Ga0501263_011247 3300049760 Unclassified 1108
172 Ga0501035_0005798 3300049822 Bacteria 11643
173 Ga0501035_0007807 3300049822 Bacteria 9997
174 Ga0501035_0043904 3300049822 Unclassified 4027
175 Ga0501044_0000129 3300049823 Bacteria 92557
176 Ga0501044_0000633 3300049823 Bacteria 42422
177 Ga0501044_0013199 3300049823 Bacteria 8947
178 Ga0500636_0201290 3300053177 Unclassified 1053
179 Ga0265337_1006783
180 rootH1_10223309
181 Ga0070658_10289809
182 Ga0070683_100351449
183 Ga0070660_100066784
184 Ga0070660_100106615
185 Ga0070691_10064727
186 Ga0070714_100855838
187 Ga0070705_100114188
188 Ga0070694_100021646
189 Ga0070681_10026490
190 Ga0070681_10097169
191 Ga0070685_10342488
192 Ga0070707_100266745
193 Ga0070686_100002764
194 Ga0070704_100001026
195 Ga0068855_100029758
196 Ga0068855_100038334
197 Ga0068855_100066051
198 Ga0068855_100309822
199 Ga0068856_100000588
200 Ga0068856_100001496
201 Ga0068856_100058856
202 Ga0068859_100116533
203 Ga0068859_100203599
204 Ga0068859_100958753
205 Ga0068864_100509204
206 Ga0097621_100430229
207 Ga0068871_100166393
208 Ga0068871_100599992
209 Ga0097620_100116534
210 Ga0097620_100203598
211 Ga0097620_100958973
212 Ga0105240_10070215
213 Ga0105240_10087793
214 Ga0105238_10010348
215 Ga0105238_10029842
216 Ga0105238_10537776
217 Ga0105238_10842175
218 Ga0157370_10028492
219 Ga0157374_10042929
220 Ga0163163_10000027
221 Ga0207707_10020335
222 Ga0207707_10114684
223 Ga0207695_10104861
224 Ga0207657_10074881
225 Ga0207694_10016727
226 Ga0207694_10037894
227 Ga0207694_10307641
228 Ga0207667_10019471
229 Ga0207667_10033222
230 Ga0207667_10199964
231 Ga0207667_10209117
232 Ga0207702_10000683
233 Ga0207702_10001413
234 Ga0207702_10138764
235 Ga0207702_10461460
236 Ga0207676_10067200
237 Ga0265326_10004364
238 Ga0265326_10061534
239 Ga0265334_10008658
240 Ga0265338_10000943
241 Ga0265338_10002795
242 Ga0265338_10003952
243 Ga0265338_10019476
244 Ga0265338_10046636
245 Ga0265338_10069703
246 Ga0265338_10380868
247 Ga0265324_10000672
248 Ga0265324_10005108
249 Ga0265324_10016589
250 Ga0265324_10026385
251 Ga0265324_10053291
252 Ga0265324_10058340
253 Ga0265329_10007347
254 Ga0265329_10032120
255 Ga0265339_10038689
256 Ga0265339_10113922
257 Ga0265327_10003820
258 Ga0265327_10011012
259 Ga0265316_10198384
260 Ga0265314_10000073
261 Ga0265314_10000646
262 Ga0265314_10027551
263 Ga0316576_10301761
264 Ga0373951_0033714
265 Ga0373945_0059267
266 Ga0373953_0194552
267 Ga0373954_0073743
268 Ga0373956_0055862
269 Ga0373955_0286307
270 Ga0316574_0111030
271 Ga0373935_0033160
272 Ga0373933_0046453
273 Ga0373947_0036512
274 Ga0373937_0016450
275 Ga0373937_0303551
276 Ga0316584_0523855
277 Ga0373925_0016704
278 Ga0451577_0019741
279 Ga0451577_0089485
280 Ga0451577_0217807
281 Ga0451577_0349842
282 Ga0453684_0005644
283 Ga0453684_0156287
284 Ga0453684_0506647
285 Ga0451576_0098256
286 Ga0451576_0103933
287 Ga0451576_0106948
288 Ga0451576_0110358
289 Ga0451576_0227741
290 Ga0451576_0285092
291 Ga0451576_0565033
292 Ga0451576_0727189
293 Ga0451576_1015016
294 Ga0495629_0297804
295 Ga0495582_0020048
296 Ga0495662_0047974
297 Ga0495618_0042705
298 Ga0495628_0101760
299 Ga0495630_0000022
300 Ga0495630_0056943
301 Ga0495630_0242805
302 Ga0495630_0287033
303 Ga0495630_0389379
304 Ga0495666_0008107
305 Ga0495666_0027277
306 Ga0495652_0105041
307 Ga0495640_0118612
308 Ga0495640_0186925
309 Ga0495586_0000010
310 Ga0495586_0004229
311 Ga0495586_0042639
312 Ga0495645_0088892
313 Ga0495645_0165967
314 Ga0495645_0220947
315 Ga0495667_0145362
316 Ga0495667_0231038
317 Ga0495634_0005921
318 Ga0495634_0024569
319 Ga0495599_0028586
320 Ga0495647_0225122
321 Ga0495658_0010593
322 Ga0495658_0048840
323 Ga0495669_0152432
324 Ga0495613_0195738
325 Ga0495624_0039810
326 Ga0495600_0064057
327 Ga0495581_0223405
328 Ga0495674_0000401
329 Ga0495674_0010471
330 Ga0495676_0015413
331 Ga0495676_0232158
332 Ga0495680_0108128
333 Ga0495680_0220312
334 Ga0495675_0032762
335 Ga0495675_0117585
336 Ga0495684_0091597
337 Ga0501031_0000285
338 Ga0501031_0313055
339 Ga0501032_0070092
340 Ga0501032_0079673
341 Ga0501032_0080727
342 Ga0501033_0005072
343 Ga0501033_0066713
344 Ga0501033_0136698
345 Ga0501036_0423637
346 Ga0501046_0198384
347 Ga0501070_0418996
348 Ga0501243_001369
349 Ga0501263_011247
350 Ga0501035_0005798
351 Ga0501035_0007807
352 Ga0501035_0043904
353 Ga0501044_0000129
354 Ga0501044_0000633
355 Ga0501044_0013199
356 Ga0500636_0201290

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00027

cNMP_binding

Cyclic nucleotide-binding domain

78

166

0.97

PF13545

HTH_Crp_2

Crp-like helix-turn-helix domain

198

270

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ssb-assembly1.cif.gz_A co-structure of pkg1 regulatory domain with compound 33 0.9053 8 127
5j48-assembly1.cif.gz_A pkg i's carboyl terminal cyclic nucleotide binding domain (cnb-b) in a complex with 8-pcpt-cgmp 0.8838 1 125
4z07-assembly1.cif.gz_C co-crystal structure of the tandem cnb (cnb-a/b) domains of human pkg i beta with cgmp 0.8807 9 125
5kjy-assembly1.cif.gz_A co-crystal structure of pka ri alpha cnb-b mutant (g316r/a336t) with camp 0.8799 9 125
6hyq-assembly3.cif.gz_C regulatory subunit of a camp-independent protein kinase a from trypanosoma cruzi bound to guanosine 0.8788 9 125
ID Description Score Start End Superfamily
af_O69695_533_653_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9241 38 124 2.60.120.10
af_I1KW21_370_502_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.912 16 138 2.60.120.10
5j3uA02 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9083 5 125 2.60.120.10
af_K7KIP4_365_503_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9046 14 136 2.60.120.10
af_Q9VL34_535_672_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9025 9 125 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A7C1YKT0-F1-model_v4 Cyclic nucleotide-binding domain-containing protein 0.9642 13 133 GO:0003700
GO:0005829
AF-A0A7C4RU19-F1-model_v4 Cyclic nucleotide-binding domain-containing protein 0.9451 13 110 GO:0003700
GO:0005829
AF-T0ZZD3-F1-model_v4 Transcriptional regulator, Crp/Fnr family 0.9416 32 112 GO:0003700
GO:0005829
AF-A0A7C1YKT0-F1-model_v4 Cyclic nucleotide-binding domain-containing protein 0.9341 13 133 GO:0003700
GO:0005829
AF-A0A212DUJ2-F1-model_v4 deleted 0.9236 9 129

Map