F271869

General Info

Members Datasets Scaffolds Average Seq Length
178 153 153 250

Family's Representative Sequence

Representative Sequence 3300007076|Ga0075435_100066516|Ga0075435_1000665161
Length 295
Sequence MRRPLNPCLMIYRAGAGVPVRRPCPCCRRRSGRLIDVTSPIRVTVWGENFHEQSEQDRAGMAERYPDGMHGAIANGLTELLGESVTVMIATQDQPEHGLAEDVLNTTDVLTWWGHATHATVDDVVVDRVQERVLGGMGLLALHSAHFSKIFRRLMGTTCSLAWRNSSDTELVWSVNPAHPITVGVPQPILINDHEMYGEFFDIPAPDELIFISTFSGGEVFRSGCCWRRGKGKVFYFSPGDQHYPIYHHPDIKRVLANAVLWAQPENVVDLDPPSVVNSPAPHFDSRDLADGVRS

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
3 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
4 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
5 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
6 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
7 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
8 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
9 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
10 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
11 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
12 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
13 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
14 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
15 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
16 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
17 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
18 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
19 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
20 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
21 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
22 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
23 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
24 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
25 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
26 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
27 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
28 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
29 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
30 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
31 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
32 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
35 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
36 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
37 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
47 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
48 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
63 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
68 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
92 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
93 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
94 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
95 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
96 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
97 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
98 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
99 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
100 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
103 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
104 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
105 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
106 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
109 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
110 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
111 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
112 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
113 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
114 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
118 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
119 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
120 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
121 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
122 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
123 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
124 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
125 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
126 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
127 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
128 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
129 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
130 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
140 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
141 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
142 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
147 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
148 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
149 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
150 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
153 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.39
Metatranscriptomes 0.56
Isolates 14.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.56
Nodule 0
Rhizoplane 9.55
Rhizosphere 79.78
Stem 0
Stem Tuber 0
Unclassified 10.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10007202 3300001979 Bacteria 4535
2 JGI24739J22299_10008437 3300001989 Bacteria 3849
3 JGI24735J21928_10052701 3300002067 Bacteria 1173
4 Ga0070676_10155085 3300005328 Bacteria 1469
5 Ga0070683_100054549 3300005329 Bacteria 3706
6 Ga0070670_100200687 3300005331 Bacteria 1733
7 Ga0070682_100380416 3300005337 Bacteria 1061
8 Ga0070668_100058962 3300005347 Bacteria 2971
9 Ga0070669_100272832 3300005353 Bacteria 1353
10 Ga0070674_100630791 3300005356 Bacteria 909
11 Ga0070667_100150703 3300005367 Bacteria 2043
12 Ga0070711_100168066 3300005439 Bacteria 1669
13 Ga0070700_100161963 3300005441 Bacteria 1541
14 Ga0068867_100218532 3300005459 Bacteria 1535
15 Ga0070707_100757922 3300005468 Bacteria 934
16 Ga0068857_100382343 3300005577 Bacteria 1307
17 Ga0068854_100133836 3300005578 Bacteria 1896
18 Ga0068856_100528670 3300005614 Bacteria 1200
19 Ga0068859_100024185 3300005617 Bacteria 6095
20 Ga0068864_100715059 3300005618 Bacteria 979
21 Ga0068863_100020724 3300005841 Bacteria 6278
22 Ga0068860_100278277 3300005843 Bacteria 1635
23 Ga0068862_100404915 3300005844 Bacteria 1277
24 Ga0081455_10172845 3300005937 Bacteria 1644
25 Ga0081539_10001931 3300005985 Bacteria 31888
26 Ga0075432_10000279 3300006058 Bacteria 14164
27 Ga0075431_100021023 3300006847 Bacteria 6669
28 Ga0075433_10047125 3300006852 Unclassified 3749
29 Ga0075434_100002374 3300006871 Bacteria 16512
30 Ga0075436_100011560 3300006914 Bacteria 6055
31 Ga0097620_100024185 3300006931 Bacteria 6095
32 Ga0075435_100066516 3300007076 Unclassified 2932
33 Ga0111539_10013088 3300009094 Bacteria 10377
34 Ga0105245_10386896 3300009098 Bacteria 1394
35 Ga0105243_10288200 3300009148 Bacteria 1482
36 Ga0105242_10017654 3300009176 Bacteria 5565
37 Ga0105248_10028794 3300009177 Bacteria 6191
38 Ga0105238_10295265 3300009551 Bacteria 1603
39 Ga0105238_10929183 3300009551 Bacteria 889
40 Ga0105249_10039668 3300009553 Bacteria 4275
41 Ga0105239_10715551 3300010375 Bacteria 1145
42 Ga0105246_10075679 3300011119 Bacteria 2384
43 Ga0157369_10022553 3300013105 Bacteria 7023
44 Ga0157369_10111171 3300013105 Bacteria 2912
45 Ga0157380_10583261 3300014326 Bacteria 1103
46 Ga0157377_10017691 3300014745 Bacteria 3691
47 Ga0224712_10037105 3300022467 Bacteria 1811
48 Ga0209051_1042375 3300025303 Bacteria 1610
49 Ga0207647_10056258 3300025904 Bacteria 2414
50 Ga0207645_10177754 3300025907 Bacteria 1396
51 Ga0207663_10069527 3300025916 Bacteria 2265
52 Ga0207657_10200784 3300025919 Bacteria 1604
53 Ga0207657_10314274 3300025919 Bacteria 1239
54 Ga0207650_10198159 3300025925 Bacteria 1607
55 Ga0207687_10222950 3300025927 Bacteria 1485
56 Ga0207644_10063609 3300025931 Bacteria 2679
57 Ga0207686_10071747 3300025934 Bacteria 2230
58 Ga0207709_10182909 3300025935 Bacteria 1482
59 Ga0207669_10388004 3300025937 Bacteria 1090
60 Ga0207661_10547767 3300025944 Bacteria 1060
61 Ga0207712_10043033 3300025961 Unclassified 3113
62 Ga0207668_10149776 3300025972 Bacteria 1805
63 Ga0207677_10134710 3300026023 Bacteria 1881
64 Ga0207678_10291015 3300026067 Bacteria 1403
65 Ga0207708_10051911 3300026075 Bacteria 3123
66 Ga0207648_10120810 3300026089 Bacteria 2303
67 Ga0207676_10158477 3300026095 Bacteria 1958
68 Ga0207676_10820252 3300026095 Bacteria 908
69 Ga0207674_10171777 3300026116 Bacteria 2121
70 Ga0207674_10184389 3300026116 Bacteria 2037
71 Ga0207428_10010380 3300027907 Bacteria 8326
72 Ga0268266_10375082 3300028379 Bacteria 1341
73 Ga0268266_10609477 3300028379 Bacteria 1049
74 Ga0268265_10083142 3300028380 Bacteria 2534
75 Ga0307512_10218046 3300030522 Bacteria 1002
76 Ga0316181_1173147 3300030744 Bacteria 1550
77 Ga0265320_10021824 3300031240 Bacteria 3438
78 Ga0307408_100019003 3300031548 Bacteria 4622
79 Ga0307405_10056293 3300031731 Bacteria 2465
80 Ga0307413_10130308 3300031824 Bacteria 1720
81 Ga0307518_10059366 3300031838 Bacteria 2777
82 Ga0307410_10107401 3300031852 Bacteria 2013
83 Ga0307410_10158859 3300031852 Bacteria 1691
84 Ga0307406_10093381 3300031901 Bacteria 2031
85 Ga0307406_10225244 3300031901 Bacteria 1396
86 Ga0307407_10250249 3300031903 Bacteria 1214
87 Ga0307412_10029564 3300031911 Bacteria 3440
88 Ga0307412_10066564 3300031911 Bacteria 2442
89 Ga0307412_10103815 3300031911 Bacteria 2015
90 Ga0307412_10721763 3300031911 Bacteria 857
91 Ga0307409_100024736 3300031995 Bacteria 4195
92 Ga0307409_100034904 3300031995 Bacteria 3680
93 Ga0307409_100124080 3300031995 Bacteria 2193
94 Ga0307409_100256831 3300031995 Bacteria 1601
95 Ga0307416_100064066 3300032002 Bacteria 3014
96 Ga0307416_100472829 3300032002 Bacteria 1311
97 Ga0307416_101102462 3300032002 Bacteria 898
98 Ga0307415_100037731 3300032126 Bacteria 3178
99 Ga0307415_100288132 3300032126 Bacteria 1354
100 Ga0307507_10210827 3300033179 Bacteria 1325
101 Ga0373960_0114128 3300035121 Bacteria 890
102 Ga0395901_0320066 3300038443 Bacteria 1605
103 Ga0395901_0585085 3300038443 Bacteria 1127
104 Ga0436362_1267979 3300039453 Bacteria 1337
105 Ga0439442_000110 3300042002 Bacteria 20325
106 Ga0450920_004457 3300042122 Bacteria 2460
107 Ga0450907_007920 3300042146 Bacteria 1769
108 Ga0439434_0007722 3300042435 Bacteria 3153
109 Ga0439464_0022871 3300042439 Bacteria 1724
110 Ga0450918_005512 3300042531 Bacteria 2273
111 Ga0466960_0052702 3300044901 Bacteria 1969
112 Ga0466960_0166145 3300044901 Bacteria 1188
113 Ga0495608_0193732 3300046511 Bacteria 1282
114 Ga0495674_0220947 3300047319 Bacteria 1566
115 Ga0495672_0137130 3300047320 Bacteria 1282
116 Ga0495680_0515663 3300047322 Bacteria 810
117 Ga0496100_0050478 3300048903 Bacteria 2695
118 Ga0496101_0006247 3300048904 Bacteria 7664
119 Ga0496101_0011762 3300048904 Bacteria 5818
120 Ga0496102_0085565 3300048905 Bacteria 2911
121 Ga0496103_0071992 3300048906 Bacteria 2164
122 Ga0496104_0002789 3300048907 Bacteria 15050
123 Ga0496106_0027842 3300048909 Bacteria 4208
124 Ga0496107_0010245 3300048910 Bacteria 6506
125 Ga0496107_0037324 3300048910 Bacteria 3486
126 Ga0496108_0008164 3300048911 Bacteria 8491
127 Ga0496109_0114557 3300048912 Bacteria 2508
128 Ga0496110_0076897 3300048913 Bacteria 2968
129 Ga0496114_0009624 3300048917 Bacteria 7677
130 Ga0496114_0070142 3300048917 Bacteria 2943
131 Ga0496114_0183390 3300048917 Bacteria 1828
132 Ga0496115_0000491 3300048918 Bacteria 31231
133 Ga0496115_0404191 3300048918 Bacteria 1108
134 Ga0496126_0016280 3300048929 Bacteria 7442
135 Ga0501031_0151971 3300049568 Bacteria 1513
136 Ga0501037_0008458 3300049573 Bacteria 7547
137 Ga0501039_0005575 3300049575 Bacteria 9528
138 Ga0501040_0338943 3300049576 Bacteria 1076
139 Ga0501041_0180700 3300049577 Bacteria 1320
140 Ga0501042_0284070 3300049578 Bacteria 1195
141 Ga0501075_0073802 3300049591 Bacteria 2580
142 Ga0501076_0273224 3300049592 Bacteria 1384
143 Ga0501079_0370769 3300049741 Bacteria 1122
144 Ga0501081_0065055 3300049743 Bacteria 2534
145 Ga0501035_0447630 3300049822 Bacteria 1069
146 Ga0501044_0084772 3300049823 Bacteria 3202
147 nmdc:mga05p37_45928_c1 3300050507 Bacteria 5371
148 nmdc:mga0qj67_65544_c1 3300050509 Bacteria 2892
149 nmdc:mga06r32_42830_c1 3300050510 Bacteria 4307
150 nmdc:mga08y16_51075_c1 3300050511 Bacteria 4326
151 nmdc:mga0n895_7194_c1 3300050512 Bacteria 9527
152 nmdc:mga0a205_14421_c1 3300050515 Bacteria 7371
153 Ga0501084_0051374 3300054114 Bacteria 3450

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2808606360 2808850039 233
2 iso_pu_bacteria 2964326757 2964327840 235
3 3300038443 Ga0395901_0320066 Ga0395901_0320066_842_1561 237
4 3300038443 Ga0395901_0585085 Ga0395901_0585085_260_979 237
5 iso_pu_bacteria 2857733635 2857734104 237
6 3300039453 Ga0436362_1267979 Ga0436362_1267979_124_849 238
7 3300048911 Ga0496108_0008164 Ga0496108_0008164_6055_6777 238
8 3300048912 Ga0496109_0114557 Ga0496109_0114557_751_1473 238
9 3300048913 Ga0496110_0076897 Ga0496110_0076897_79_801 238
10 3300048918 Ga0496115_0404191 Ga0496115_0404191_189_911 238
11 3300025303 Ga0209051_1042375 Ga0209051_10423752 240
12 3300035121 Ga0373960_0114128 Ga0373960_0114128_21_758 240
13 3300044901 Ga0466960_0052702 Ga0466960_0052702_1156_1878 240
14 3300044901 Ga0466960_0166145 Ga0466960_0166145_420_1145 240
15 iso_pu_bacteria 2775506735 2775657456 240
16 iso_pu_bacteria 2811994871 2812319490 240
17 iso_pu_bacteria 2848551377 2848553648 240
18 iso_pu_bacteria 2895427314 2895433230 240
19 3300005347 Ga0070668_100058962 Ga0070668_1000589623 241
20 3300005353 Ga0070669_100272832 Ga0070669_1002728322 241
21 3300005367 Ga0070667_100150703 Ga0070667_1001507032 241
22 3300005441 Ga0070700_100161963 Ga0070700_1001619631 241
23 3300005617 Ga0068859_100024185 Ga0068859_1000241856 241
24 3300005841 Ga0068863_100020724 Ga0068863_1000207247 241
25 3300005844 Ga0068862_100404915 Ga0068862_1004049152 241
26 3300006931 Ga0097620_100024185 Ga0097620_1000241853 241
27 3300009177 Ga0105248_10028794 Ga0105248_100287945 241
28 3300009553 Ga0105249_10039668 Ga0105249_100396684 241
29 3300025919 Ga0207657_10200784 Ga0207657_102007843 241
30 3300025961 Ga0207712_10043033 Ga0207712_100430333 241
31 3300025972 Ga0207668_10149776 Ga0207668_101497763 241
32 3300026095 Ga0207676_10158477 Ga0207676_101584771 241
33 3300028379 Ga0268266_10375082 Ga0268266_103750822 241
34 3300028380 Ga0268265_10083142 Ga0268265_100831423 241
35 iso_pu_bacteria 2690315906 2691515662 241
36 iso_pu_bacteria 2808606357 2808828775 241
37 iso_pu_bacteria 2808606370 2808893051 241
38 iso_pu_bacteria 2945916053 2945917240 241
39 iso_pu_bacteria 2945920336 2945922518 241
40 iso_pu_bacteria 2946037020 2946037192 241
41 iso_pu_bacteria 2946059875 2946061071 241
42 iso_pu_bacteria 2953998280 2953998457 241
43 3300005985 Ga0081539_10001931 Ga0081539_1000193120 242
44 3300009551 Ga0105238_10929183 Ga0105238_109291831 242
45 3300014326 Ga0157380_10583261 Ga0157380_105832612 242
46 3300025935 Ga0207709_10182909 Ga0207709_101829092 242
47 3300031838 Ga0307518_10059366 Ga0307518_100593663 242
48 3300032126 Ga0307415_100037731 Ga0307415_1000377314 242
49 3300046511 Ga0495608_0193732 Ga0495608_0193732_396_1130 242
50 3300047319 Ga0495674_0220947 Ga0495674_0220947_293_1027 242
51 3300047322 Ga0495680_0515663 Ga0495680_0515663_23_757 242
52 3300048907 Ga0496104_0002789 Ga0496104_0002789_12454_13188 242
53 3300048917 Ga0496114_0070142 Ga0496114_0070142_798_1532 242
54 3300048917 Ga0496114_0183390 Ga0496114_0183390_108_842 242
55 3300049568 Ga0501031_0151971 Ga0501031_0151971_118_858 243
56 3300049575 Ga0501039_0005575 Ga0501039_0005575_3329_4069 243
57 3300049576 Ga0501040_0338943 Ga0501040_0338943_76_816 243
58 3300049577 Ga0501041_0180700 Ga0501041_0180700_537_1277 243
59 3300049578 Ga0501042_0284070 Ga0501042_0284070_63_803 243
60 3300049591 Ga0501075_0073802 Ga0501075_0073802_854_1594 243
61 3300049592 Ga0501076_0273224 Ga0501076_0273224_318_1058 243
62 3300049741 Ga0501079_0370769 Ga0501079_0370769_84_824 243
63 3300049743 Ga0501081_0065055 Ga0501081_0065055_168_908 243
64 3300049822 Ga0501035_0447630 Ga0501035_0447630_126_866 243
65 3300054114 Ga0501084_0051374 Ga0501084_0051374_2030_2770 243
66 iso_pu_bacteria 2515154155 2515853362 243
67 iso_pu_bacteria 2808606360 2808852658 243
68 iso_pu_bacteria 2816332119 2816423866 243
69 3300022467 Ga0224712_10037105 Ga0224712_100371052 244
70 3300025907 Ga0207645_10177754 Ga0207645_101777541 244
71 3300033179 Ga0307507_10210827 Ga0307507_102108272 244
72 3300048918 Ga0496115_0000491 Ga0496115_0000491_19648_20388 244
73 iso_pu_bacteria 2904497146 2904497198 244
74 iso_pu_bacteria 2919034639 2919037857 244
75 iso_pu_bacteria 2919055335 2919056706 244
76 3300005328 Ga0070676_10155085 Ga0070676_101550852 245
77 3300005468 Ga0070707_100757922 Ga0070707_1007579222 245
78 3300013105 Ga0157369_10022553 Ga0157369_100225535 245
79 3300013105 Ga0157369_10111171 Ga0157369_101111712 245
80 3300025944 Ga0207661_10547767 Ga0207661_105477672 245
81 3300031240 Ga0265320_10021824 Ga0265320_100218243 245
82 3300031548 Ga0307408_100019003 Ga0307408_1000190033 245
83 3300031731 Ga0307405_10056293 Ga0307405_100562932 245
84 3300031824 Ga0307413_10130308 Ga0307413_101303082 245
85 3300031852 Ga0307410_10107401 Ga0307410_101074012 245
86 3300031852 Ga0307410_10158859 Ga0307410_101588592 245
87 3300031901 Ga0307406_10093381 Ga0307406_100933812 245
88 3300031911 Ga0307412_10029564 Ga0307412_100295644 245
89 3300031911 Ga0307412_10066564 Ga0307412_100665642 245
90 3300031911 Ga0307412_10103815 Ga0307412_101038152 245
91 3300031911 Ga0307412_10721763 Ga0307412_107217631 245
92 3300031995 Ga0307409_100024736 Ga0307409_1000247363 245
93 3300031995 Ga0307409_100034904 Ga0307409_1000349044 245
94 3300031995 Ga0307409_100124080 Ga0307409_1001240802 245
95 3300031995 Ga0307409_100256831 Ga0307409_1002568312 245
96 3300032002 Ga0307416_100472829 Ga0307416_1004728292 245
97 3300032002 Ga0307416_101102462 Ga0307416_1011024621 245
98 3300042002 Ga0439442_000110 Ga0439442_000110_17437_18186 245
99 3300042122 Ga0450920_004457 Ga0450920_004457_65_814 245
100 3300042146 Ga0450907_007920 Ga0450907_007920_824_1573 245
101 3300042435 Ga0439434_0007722 Ga0439434_0007722_1856_2605 245
102 3300042531 Ga0450918_005512 Ga0450918_005512_548_1297 245
103 3300049573 Ga0501037_0008458 Ga0501037_0008458_2594_3349 245
104 3300009094 Ga0111539_10013088 Ga0111539_100130886 246
105 3300050511 nmdc:mga08y16_51075_c1 nmdc:mga08y16_51075_c1_226_1005 246
106 3300050512 nmdc:mga0n895_7194_c1 nmdc:mga0n895_7194_c1_802_1581 246
107 3300050515 nmdc:mga0a205_14421_c1 nmdc:mga0a205_14421_c1_4159_4938 246
108 3300005331 Ga0070670_100200687 Ga0070670_1002006872 247
109 3300006847 Ga0075431_100021023 Ga0075431_1000210236 247
110 3300025925 Ga0207650_10198159 Ga0207650_101981592 247
111 3300030522 Ga0307512_10218046 Ga0307512_102180461 247
112 3300030744 Ga0316181_1173147 Ga0316181_11731472 247
113 3300050507 nmdc:mga05p37_45928_c1 nmdc:mga05p37_45928_c1_1601_2377 247
114 3300050509 nmdc:mga0qj67_65544_c1 nmdc:mga0qj67_65544_c1_1962_2738 247
115 3300050510 nmdc:mga06r32_42830_c1 nmdc:mga06r32_42830_c1_127_903 247
116 iso_pu_bacteria 2867346516 2867346750 247
117 3300005356 Ga0070674_100630791 Ga0070674_1006307911 248
118 3300005937 Ga0081455_10172845 Ga0081455_101728452 248
119 3300009176 Ga0105242_10017654 Ga0105242_100176545 248
120 3300025931 Ga0207644_10063609 Ga0207644_100636093 248
121 3300025934 Ga0207686_10071747 Ga0207686_100717472 248
122 3300025937 Ga0207669_10388004 Ga0207669_103880041 248
123 3300031901 Ga0307406_10225244 Ga0307406_102252442 248
124 3300031903 Ga0307407_10250249 Ga0307407_102502492 248
125 3300032002 Ga0307416_100064066 Ga0307416_1000640662 248
126 3300032126 Ga0307415_100288132 Ga0307415_1002881322 248
127 3300048903 Ga0496100_0050478 Ga0496100_0050478_209_964 248
128 3300048904 Ga0496101_0006247 Ga0496101_0006247_6628_7383 248
129 3300048904 Ga0496101_0011762 Ga0496101_0011762_978_1733 248
130 3300048905 Ga0496102_0085565 Ga0496102_0085565_1950_2705 248
131 3300048906 Ga0496103_0071992 Ga0496103_0071992_188_943 248
132 3300048909 Ga0496106_0027842 Ga0496106_0027842_821_1576 248
133 3300048910 Ga0496107_0010245 Ga0496107_0010245_206_961 248
134 3300048910 Ga0496107_0037324 Ga0496107_0037324_278_1033 248
135 3300048917 Ga0496114_0009624 Ga0496114_0009624_6232_6987 248
136 3300048929 Ga0496126_0016280 Ga0496126_0016280_794_1561 248
137 iso_pu_bacteria 2990044586 2990045008 248
138 3300005459 Ga0068867_100218532 Ga0068867_1002185322 249
139 3300005578 Ga0068854_100133836 Ga0068854_1001338362 249
140 3300005843 Ga0068860_100278277 Ga0068860_1002782772 249
141 3300014745 Ga0157377_10017691 Ga0157377_100176913 249
142 3300026023 Ga0207677_10134710 Ga0207677_101347102 249
143 3300026075 Ga0207708_10051911 Ga0207708_100519112 249
144 3300026089 Ga0207648_10120810 Ga0207648_101208102 249
145 3300026116 Ga0207674_10184389 Ga0207674_101843892 249
146 3300005329 Ga0070683_100054549 Ga0070683_1000545494 250
147 3300005439 Ga0070711_100168066 Ga0070711_1001680661 250
148 3300006058 Ga0075432_10000279 Ga0075432_100002792 250
149 3300006852 Ga0075433_10047125 Ga0075433_100471252 250
150 3300006871 Ga0075434_100002374 Ga0075434_1000023742 250
151 3300006914 Ga0075436_100011560 Ga0075436_1000115606 250
152 3300007076 Ga0075435_100066516 Ga0075435_1000665161 250
153 3300025916 Ga0207663_10069527 Ga0207663_100695271 250
154 3300026067 Ga0207678_10291015 Ga0207678_102910151 250
155 3300026116 Ga0207674_10171777 Ga0207674_101717772 250
156 3300027907 Ga0207428_10010380 Ga0207428_100103808 250
157 3300042439 Ga0439464_0022871 Ga0439464_0022871_495_1298 250
158 3300049823 Ga0501044_0084772 Ga0501044_0084772_2112_2864 250
159 iso_pu_bacteria 8008485437 8008491395 250
160 iso_pu_bacteria 8025524527 8025530725 250
161 3300001979 JGI24740J21852_10007202 JGI24740J21852_100072024 251
162 3300001989 JGI24739J22299_10008437 JGI24739J22299_100084372 251
163 3300002067 JGI24735J21928_10052701 JGI24735J21928_100527012 251
164 3300005337 Ga0070682_100380416 Ga0070682_1003804161 251
165 3300005577 Ga0068857_100382343 Ga0068857_1003823432 251
166 3300005614 Ga0068856_100528670 Ga0068856_1005286701 251
167 3300005618 Ga0068864_100715059 Ga0068864_1007150592 251
168 3300009098 Ga0105245_10386896 Ga0105245_103868961 251
169 3300009148 Ga0105243_10288200 Ga0105243_102882002 251
170 3300009551 Ga0105238_10295265 Ga0105238_102952652 251
171 3300010375 Ga0105239_10715551 Ga0105239_107155512 251
172 3300011119 Ga0105246_10075679 Ga0105246_100756792 251
173 3300025904 Ga0207647_10056258 Ga0207647_100562583 251
174 3300025919 Ga0207657_10314274 Ga0207657_103142742 251
175 3300025927 Ga0207687_10222950 Ga0207687_102229502 251
176 3300026095 Ga0207676_10820252 Ga0207676_108202522 251
177 3300028379 Ga0268266_10609477 Ga0268266_106094772 251
178 3300047320 Ga0495672_0137130 Ga0495672_0137130_101_856 251

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06283

ThuA

Trehalose utilisation

42

263

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1t0b-assembly2.cif.gz_E structure of thua-like protein from bacillus stearothermophilus 0.968 8 245
1t0b-assembly2.cif.gz_E structure of thua-like protein from bacillus stearothermophilus 0.9404 8 245
2ywc-assembly3.cif.gz_D crystal structure of gmp synthetase from thermus thermophilus in complex with xmp 0.6911 11 226
4pxy-assembly1.cif.gz_A crystal structure of a putative thua-like protein (bacuni_01602) from bacteroides uniformis atcc 8492 at 1.50 a resolution 0.6897 3 227
3kln-assembly4.cif.gz_D vibrio cholerae vpst 0.6837 6 108
ID Description Score Start End Superfamily
1t0bA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.967 8 245 3.40.50.880
1t0bA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9394 8 245 3.40.50.880
af_Q2FYW4_304_492_3.30.870.10 Alpha Beta;2-Layer Sandwich;Endonuclease; Chain A;Endonuclease Chain A 0.6964 87 107 3.30.870.10
4pxyB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.6952 3 227 3.40.50.880
af_O94277_8_195_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.6904 9 225 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A2A6KRS2-F1-model_v4 deleted 0.9897 8 147
AF-A0A852SAT6-F1-model_v4 deleted 0.9881 8 234
AF-A0A435Y4K3-F1-model_v4 Trehalose utilization protein ThuA 0.988 8 234
AF-A0A529T0E0-F1-model_v4 Trehalose utilization protein ThuA 0.9874 8 121
AF-A0A0M6ZA89-F1-model_v4 Trehalose utilization protein 0.9873 8 235

Feature Viewer

pLDDT pTM Quality
91.56 0.9 High
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Predicted Structure (AlphaFold2)

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