F270759

General Info

Members Datasets Scaffolds Average Seq Length
177 142 157 386

Family's Representative Sequence

Representative Sequence 3300046499|Ga0495594_0000403|Ga0495594_0000403_12400_13746
Length 448
Sequence VKALPRLRAGRSFLARERSDVTDLDSGHKSDGQSETLIRTPASGRPAAVHLAPTERQQQLRAELRTYFRDVITGPDEGSGTDATSRMRAGRADDPAGRRRLLRRIGADGMLGLGWPVEYGGQGRGPDEQFVFFDEAYRAGAPVSMVTLNTVGPTLMKYGTEAQKAYFLPRILNGDLVFAIGYSEPEAGTDLAALRTRAVRDGEAWVIDGQKIFTSNAQHADWIWLACRTDPDAAKHKGISIILVPTDAPGFSWTPIETVGGLTTTTTYYDGIRVPVTNLVGEENGGWGLITNQLNHERVALAAIGMQAEEFYEAVLAHARTPDPVSGRCPVDEPWVRSRLAEAYARLAATRLLNWRLVGDVGAGSLAPGEASGVKFMGTESAVEVYRMCQEIAGETGMVRGGSLGSFGDGELERMNRAAQINTFGGGVSEVQREIVATMRLGMKRGKR

Samples

Sample ID Description Type Environment
1 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
2 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
3 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
4 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
5 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
6 2643221670 Streptomyces sp. Root431 Isolate Unclassified
7 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
8 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
9 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
10 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
11 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
12 2867475112 Streptomyces sp. TM32 Isolate Unclassified
13 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
14 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
15 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
16 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
17 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
18 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
19 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
22 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
37 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
42 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
45 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
46 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
47 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
48 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
49 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
52 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
53 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
54 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
55 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
56 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
57 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
58 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
59 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
60 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
61 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
64 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
67 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
68 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
69 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
74 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
75 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
76 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
77 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
78 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
79 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
80 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
83 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
84 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
85 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
86 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
87 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
90 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
91 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
92 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
93 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
94 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
95 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
96 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
97 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
98 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
99 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
100 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
101 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
102 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
103 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
108 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
113 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
114 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
115 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
123 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
134 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
137 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
138 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
139 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
140 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
141 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
142 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.7
Metatranscriptomes 0
Isolates 11.3

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.6
Nodule 0
Rhizoplane 1.13
Rhizosphere 74.58
Stem 0
Stem Tuber 0
Unclassified 14.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25160J50197_1004621 3300003354 Bacteria 5917
2 Ga0070658_10201571 3300005327 Bacteria 1679
3 Ga0070676_10101349 3300005328 Bacteria 1779
4 Ga0070680_100025253 3300005336 Bacteria 4747
5 Ga0070668_100000989 3300005347 Bacteria 19947
6 Ga0070708_100111109 3300005445 Bacteria 2519
7 Ga0070698_100015817 3300005471 Bacteria 7969
8 Ga0070684_100071535 3300005535 Bacteria 3052
9 Ga0075365_10002745 3300006038 Bacteria 8783
10 Ga0075363_100014242 3300006048 Bacteria 3879
11 Ga0075363_100028184 3300006048 Bacteria 2886
12 Ga0075363_100064010 3300006048 Bacteria 1986
13 Ga0075364_10016042 3300006051 Bacteria 4654
14 Ga0075362_10042093 3300006177 Bacteria 2017
15 Ga0105251_10004969 3300009011 Bacteria 8845
16 Ga0105237_10204151 3300009545 Bacteria 1977
17 Ga0157369_10172274 3300013105 Bacteria 2280
18 Ga0157379_10004434 3300014968 Bacteria 12034
19 Ga0213876_10003727 3300021384 Bacteria 8638
20 Ga0207426_1002209 3300025302 Bacteria 13070
21 Ga0207426_1003649 3300025302 Bacteria 8130
22 Ga0207426_1005449 3300025302 Bacteria 5805
23 Ga0207426_1016201 3300025302 Bacteria 2683
24 Ga0207713_1018557 3300025735 Bacteria 3439
25 Ga0207645_10092541 3300025907 Bacteria 1945
26 Ga0207705_10095096 3300025909 Bacteria 2186
27 Ga0207652_10085376 3300025921 Bacteria 2766
28 Ga0307517_10059385 3300028786 Bacteria 3663
29 Ga0307515_10006680 3300028794 Bacteria 22985
30 Ga0265338_10121702 3300028800 Bacteria 2078
31 Ga0307511_10026891 3300030521 Bacteria 5268
32 Ga0307512_10032438 3300030522 Bacteria 4510
33 Ga0265325_10005307 3300031241 Bacteria 7985
34 Ga0307509_10009144 3300031507 Bacteria 12456
35 Ga0307509_10022665 3300031507 Bacteria 7074
36 Ga0307509_10028711 3300031507 Bacteria 6182
37 Ga0307508_10004175 3300031616 Bacteria 14213
38 Ga0307508_10063754 3300031616 Bacteria 3250
39 Ga0307514_10192606 3300031649 Bacteria 1295
40 Ga0316576_10111093 3300031727 Bacteria 2055
41 Ga0307516_10045859 3300031730 Bacteria 4315
42 Ga0307507_10014710 3300033179 Bacteria 9300
43 Ga0307507_10016455 3300033179 Bacteria 8600
44 Ga0307510_10122020 3300033180 Bacteria 2307
45 Ga0373939_0042986 3300035114 Bacteria 1369
46 Ga0373942_0000751 3300035207 Bacteria 8924
47 Ga0373962_0002944 3300035242 Bacteria 4083
48 Ga0316574_0010981 3300035398 Bacteria 5134
49 Ga0373931_0089156 3300035691 Bacteria 1716
50 Ga0373925_0158453 3300037068 Bacteria 1782
51 Ga0436364_1119050 3300037853 Bacteria 4423
52 Ga0436365_0988464 3300039437 Bacteria 18669
53 Ga0436365_1617725 3300039437 Bacteria 14848
54 Ga0466961_0095770 3300044693 Bacteria 1872
55 Ga0466958_0126297 3300045836 Bacteria 1604
56 Ga0495627_009576 3300046453 Bacteria 3558
57 Ga0495592_0055482 3300046454 Bacteria 2931
58 Ga0495603_0000349 3300046455 Bacteria 24787
59 Ga0495603_0000586 3300046455 Bacteria 20486
60 Ga0495603_0006404 3300046455 Bacteria 7044
61 Ga0495629_0000454 3300046459 Bacteria 34105
62 Ga0495629_0004577 3300046459 Bacteria 10347
63 Ga0495629_0040060 3300046459 Bacteria 3296
64 Ga0495651_0008360 3300046462 Bacteria 7933
65 Ga0495653_0167665 3300046463 Bacteria 1519
66 Ga0495582_0018780 3300046473 Bacteria 3780
67 Ga0495605_0067544 3300046474 Bacteria 1696
68 Ga0495662_0007096 3300046476 Bacteria 5560
69 Ga0495662_0007126 3300046476 Bacteria 5545
70 Ga0495662_0037512 3300046476 Bacteria 2340
71 Ga0495584_0043320 3300046491 Bacteria 2272
72 Ga0495594_0000403 3300046499 Bacteria 21807
73 Ga0495594_0100624 3300046499 Bacteria 1626
74 Ga0495607_0033434 3300046501 Bacteria 3128
75 Ga0495583_0064152 3300046506 Bacteria 1630
76 Ga0495606_0014122 3300046507 Bacteria 6252
77 Ga0495608_0180306 3300046511 Bacteria 1336
78 Ga0495616_0093536 3300046513 Bacteria 1419
79 Ga0495618_0019701 3300046514 Bacteria 4151
80 Ga0495630_0042856 3300046517 Bacteria 3380
81 Ga0495631_0012545 3300046518 Bacteria 4135
82 Ga0495643_0004520 3300046522 Bacteria 9696
83 Ga0495648_0081958 3300046524 Bacteria 1833
84 Ga0495642_0011325 3300046528 Bacteria 3425
85 Ga0495652_0044130 3300046529 Bacteria 3840
86 Ga0495654_0036786 3300046530 Bacteria 2458
87 Ga0495587_0019248 3300046536 Bacteria 4227
88 Ga0495609_0002638 3300046538 Bacteria 10878
89 Ga0495622_0002748 3300046557 Bacteria 8418
90 Ga0495622_0036791 3300046557 Bacteria 2281
91 Ga0495633_0111131 3300046558 Bacteria 1270
92 Ga0495634_0001630 3300046642 Bacteria 19530
93 Ga0495611_0004291 3300046648 Bacteria 6193
94 Ga0495625_0142731 3300046660 Bacteria 1614
95 Ga0495635_0028709 3300046663 Bacteria 3866
96 Ga0495588_0059870 3300046674 Bacteria 1970
97 Ga0495657_0021139 3300046675 Bacteria 4671
98 Ga0495623_0026760 3300046679 Bacteria 3712
99 Ga0495646_0032534 3300046680 Bacteria 3246
100 Ga0495613_0008215 3300046689 Bacteria 7752
101 Ga0495613_0187378 3300046689 Bacteria 1463
102 Ga0495624_0150179 3300046690 Bacteria 1425
103 Ga0495671_0001636 3300046692 Bacteria 14697
104 Ga0495671_0106492 3300046692 Bacteria 1369
105 Ga0495589_0034128 3300046794 Bacteria 2554
106 Ga0495600_0040475 3300046809 Bacteria 3035
107 Ga0495660_0087672 3300046810 Bacteria 1622
108 Ga0495581_0048233 3300047315 Bacteria 2460
109 Ga0495604_0000226 3300047317 Bacteria 50983
110 Ga0495636_0002567 3300047318 Bacteria 6979
111 Ga0495636_0016016 3300047318 Bacteria 2991
112 Ga0495636_0032948 3300047318 Bacteria 2127
113 Ga0495674_0143466 3300047319 Bacteria 2006
114 Ga0495674_0198293 3300047319 Bacteria 1666
115 Ga0495676_0016491 3300047321 Bacteria 6553
116 Ga0495676_0031399 3300047321 Bacteria 4493
117 Ga0495676_0034598 3300047321 Bacteria 4237
118 Ga0495676_0062310 3300047321 Bacteria 2912
119 Ga0495676_0108334 3300047321 Bacteria 2044
120 Ga0495680_0012257 3300047322 Bacteria 7555
121 Ga0495687_010277 3300047443 Bacteria 5141
122 Ga0495687_014710 3300047443 Bacteria 4012
123 Ga0495675_0009888 3300047444 Bacteria 5947
124 Ga0495685_001019 3300047447 Bacteria 8544
125 Ga0495685_021466 3300047447 Bacteria 2221
126 Ga0495681_0001524 3300047470 Bacteria 17276
127 Ga0495684_0041743 3300047471 Bacteria 3515
128 Ga0495593_0109787 3300047673 Bacteria 1409
129 Ga0495602_0083735 3300048088 Bacteria 2671
130 Ga0495614_0000188 3300048089 Bacteria 23296
131 Ga0495614_0068615 3300048089 Bacteria 1527
132 Ga0496108_0338498 3300048911 Bacteria 1313
133 Ga0496109_0093811 3300048912 Bacteria 2778
134 Ga0496125_0039511 3300048928 Bacteria 4060
135 Ga0501031_0009926 3300049568 Bacteria 6199
136 Ga0501032_0235383 3300049569 Bacteria 1190
137 Ga0501033_0000068 3300049570 Bacteria 98461
138 Ga0501033_0102669 3300049570 Bacteria 2086
139 Ga0501034_0002667 3300049571 Bacteria 21105
140 Ga0501034_0059372 3300049571 Bacteria 3842
141 Ga0501034_0262299 3300049571 Bacteria 1670
142 Ga0501036_0221496 3300049572 Bacteria 1589
143 Ga0501047_0001156 3300049581 Bacteria 26184
144 Ga0501047_0083929 3300049581 Bacteria 3062
145 Ga0501070_0033174 3300049586 Bacteria 4320
146 Ga0501073_0013407 3300049589 Bacteria 5963
147 Ga0501035_0159600 3300049822 Bacteria 1953
148 Ga0501044_0000191 3300049823 Bacteria 77389
149 nmdc:mga03683_27214_c1 3300050489 Bacteria 2262
150 nmdc:mga00v17_1037_c1 3300050491 Bacteria 14786
151 nmdc:mga09592_211935_c1 3300050508 Bacteria 1678
152 Ga0495612_0029481 3300053078 Bacteria 2210
153 Ga0500566_0000211 3300053094 Bacteria 30837
154 Ga0500568_0000031 3300053139 Bacteria 153522
155 Ga0500616_0000270 3300053153 Bacteria 77614
156 Ga0500616_0011883 3300053153 Bacteria 5118
157 Ga0530510_0039244 3300061734 Bacteria 3418

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046463 Ga0495653_0167665 Ga0495653_0167665_32_1015 314
2 3300049569 Ga0501032_0235383 Ga0501032_0235383_27_983 317
3 3300046499 Ga0495594_0100624 Ga0495594_0100624_517_1536 339
4 3300053078 Ga0495612_0029481 Ga0495612_0029481_1151_2185 344
5 3300046455 Ga0495603_0000586 Ga0495603_0000586_12195_13238 347
6 3300046459 Ga0495629_0000454 Ga0495629_0000454_19067_20110 347
7 3300046689 Ga0495613_0008215 Ga0495613_0008215_6530_7573 347
8 3300047321 Ga0495676_0034598 Ga0495676_0034598_2225_3268 347
9 3300047673 Ga0495593_0109787 Ga0495593_0109787_113_1156 347
10 3300048089 Ga0495614_0000188 Ga0495614_0000188_1102_2145 347
11 3300046692 Ga0495671_0001636 Ga0495671_0001636_7630_8823 355
12 3300047470 Ga0495681_0001524 Ga0495681_0001524_2028_3185 355
13 3300046459 Ga0495629_0004577 Ga0495629_0004577_4020_5201 357
14 3300047443 Ga0495687_014710 Ga0495687_014710_2907_3992 359
15 3300049822 Ga0501035_0159600 Ga0501035_0159600_681_1847 363
16 3300048911 Ga0496108_0338498 Ga0496108_0338498_99_1226 366
17 3300049586 Ga0501070_0033174 Ga0501070_0033174_76_1203 366
18 3300033180 Ga0307510_10122020 Ga0307510_101220201 367
19 3300035114 Ga0373939_0042986 Ga0373939_0042986_52_1182 369
20 3300035207 Ga0373942_0000751 Ga0373942_0000751_2774_3904 369
21 3300035242 Ga0373962_0002944 Ga0373962_0002944_2252_3382 369
22 3300047321 Ga0495676_0062310 Ga0495676_0062310_1477_2634 370
23 3300009011 Ga0105251_10004969 Ga0105251_100049693 371
24 3300025735 Ga0207713_1018557 Ga0207713_10185573 371
25 3300031727 Ga0316576_10111093 Ga0316576_101110932 371
26 3300048912 Ga0496109_0093811 Ga0496109_0093811_1287_2471 371
27 3300046476 Ga0495662_0007126 Ga0495662_0007126_4151_5350 373
28 3300046517 Ga0495630_0042856 Ga0495630_0042856_196_1395 373
29 3300046675 Ga0495657_0021139 Ga0495657_0021139_34_1233 373
30 iso_pu_bacteria 2515154189 2516017639 373
31 3300047315 Ga0495581_0048233 Ga0495581_0048233_279_1463 374
32 3300005347 Ga0070668_100000989 Ga0070668_10000098919 375
33 3300046459 Ga0495629_0040060 Ga0495629_0040060_37_1251 375
34 3300046476 Ga0495662_0037512 Ga0495662_0037512_17_1231 375
35 3300046689 Ga0495613_0187378 Ga0495613_0187378_237_1451 375
36 3300021384 Ga0213876_10003727 Ga0213876_100037275 378
37 3300028786 Ga0307517_10059385 Ga0307517_100593853 378
38 3300028794 Ga0307515_10006680 Ga0307515_100066808 378
39 3300031507 Ga0307509_10022665 Ga0307509_100226652 378
40 3300031616 Ga0307508_10063754 Ga0307508_100637543 378
41 3300033179 Ga0307507_10014710 Ga0307507_100147107 378
42 3300037853 Ga0436364_1119050 Ga0436364_1119050_1231_2409 378
43 3300039437 Ga0436365_1617725 Ga0436365_1617725_2026_3204 378
44 3300049570 Ga0501033_0000068 Ga0501033_0000068_33398_34558 378
45 3300049581 Ga0501047_0083929 Ga0501047_0083929_1443_2603 378
46 3300049823 Ga0501044_0000191 Ga0501044_0000191_8862_10022 378
47 3300053094 Ga0500566_0000211 Ga0500566_0000211_17567_18736 378
48 3300005336 Ga0070680_100025253 Ga0070680_1000252532 379
49 3300005535 Ga0070684_100071535 Ga0070684_1000715353 379
50 3300013105 Ga0157369_10172274 Ga0157369_101722742 379
51 3300025909 Ga0207705_10095096 Ga0207705_100950962 379
52 3300025921 Ga0207652_10085376 Ga0207652_100853762 379
53 3300044693 Ga0466961_0095770 Ga0466961_0095770_521_1690 379
54 3300049572 Ga0501036_0221496 Ga0501036_0221496_100_1260 379
55 3300061734 Ga0530510_0039244 Ga0530510_0039244_53_1213 379
56 iso_pu_bacteria 3006486233 3006491730 379
57 3300031507 Ga0307509_10028711 Ga0307509_100287116 380
58 3300045836 Ga0466958_0126297 Ga0466958_0126297_358_1521 380
59 3300046474 Ga0495605_0067544 Ga0495605_0067544_146_1384 380
60 3300047447 Ga0495685_021466 Ga0495685_021466_831_2069 380
61 3300049568 Ga0501031_0009926 Ga0501031_0009926_4668_5831 380
62 3300049570 Ga0501033_0102669 Ga0501033_0102669_319_1482 380
63 3300049571 Ga0501034_0002667 Ga0501034_0002667_12567_13739 380
64 3300049581 Ga0501047_0001156 Ga0501047_0001156_17118_18290 380
65 iso_pu_bacteria 8056829672 8056833325 380
66 3300009545 Ga0105237_10204151 Ga0105237_102041512 381
67 3300031241 Ga0265325_10005307 Ga0265325_100053078 381
68 3300031507 Ga0307509_10009144 Ga0307509_100091446 381
69 3300031730 Ga0307516_10045859 Ga0307516_100458593 381
70 3300046473 Ga0495582_0018780 Ga0495582_0018780_555_1745 381
71 3300046476 Ga0495662_0007096 Ga0495662_0007096_1144_2334 381
72 3300046536 Ga0495587_0019248 Ga0495587_0019248_2202_3392 381
73 3300046557 Ga0495622_0036791 Ga0495622_0036791_94_1284 381
74 3300046642 Ga0495634_0001630 Ga0495634_0001630_13575_14765 381
75 3300046794 Ga0495589_0034128 Ga0495589_0034128_511_1749 381
76 3300047317 Ga0495604_0000226 Ga0495604_0000226_15297_16487 381
77 3300048088 Ga0495602_0083735 Ga0495602_0083735_1285_2475 381
78 3300048089 Ga0495614_0068615 Ga0495614_0068615_66_1289 381
79 iso_pu_bacteria 2616644814 2616700278 381
80 iso_pu_bacteria 2643221587 2643947833 381
81 iso_pu_bacteria 2643221670 2644390727 381
82 iso_pu_bacteria 2643221673 2644405687 381
83 iso_pu_bacteria 2643221677 2644433698 381
84 iso_pu_bacteria 2808606982 2811845816 381
85 iso_pu_bacteria 2862178590 2862179015 381
86 iso_pu_bacteria 2862290372 2862291243 381
87 iso_pu_bacteria 2875391855 2875395239 381
88 iso_pu_bacteria 2918501144 2918505216 381
89 iso_pu_bacteria 2935390628 2935390867 381
90 iso_pu_bacteria 2946045630 2946049565 381
91 3300049589 Ga0501073_0013407 Ga0501073_0013407_876_2057 382
92 iso_pu_bacteria 2582581314 2585314480 383
93 3300005327 Ga0070658_10201571 Ga0070658_102015712 384
94 3300014968 Ga0157379_10004434 Ga0157379_100044343 384
95 3300048928 Ga0496125_0039511 Ga0496125_0039511_1721_2905 384
96 3300049571 Ga0501034_0059372 Ga0501034_0059372_652_1827 384
97 3300053153 Ga0500616_0000270 Ga0500616_0000270_11361_12536 384
98 3300005328 Ga0070676_10101349 Ga0070676_101013491 385
99 3300005445 Ga0070708_100111109 Ga0070708_1001111092 385
100 3300005471 Ga0070698_100015817 Ga0070698_1000158173 385
101 3300006038 Ga0075365_10002745 Ga0075365_100027458 385
102 3300006048 Ga0075363_100014242 Ga0075363_1000142422 385
103 3300006048 Ga0075363_100028184 Ga0075363_1000281843 385
104 3300006048 Ga0075363_100064010 Ga0075363_1000640102 385
105 3300006051 Ga0075364_10016042 Ga0075364_100160423 385
106 3300006177 Ga0075362_10042093 Ga0075362_100420932 385
107 3300025907 Ga0207645_10092541 Ga0207645_100925412 385
108 3300028800 Ga0265338_10121702 Ga0265338_101217021 385
109 3300030521 Ga0307511_10026891 Ga0307511_100268915 385
110 3300033179 Ga0307507_10016455 Ga0307507_100164558 385
111 3300035398 Ga0316574_0010981 Ga0316574_0010981_3494_4678 385
112 3300035691 Ga0373931_0089156 Ga0373931_0089156_502_1686 385
113 3300037068 Ga0373925_0158453 Ga0373925_0158453_546_1733 385
114 3300039437 Ga0436365_0988464 Ga0436365_0988464_3775_4962 385
115 3300046453 Ga0495627_009576 Ga0495627_009576_1207_2370 385
116 3300046454 Ga0495592_0055482 Ga0495592_0055482_1005_2168 385
117 3300046455 Ga0495603_0006404 Ga0495603_0006404_2055_3239 385
118 3300046462 Ga0495651_0008360 Ga0495651_0008360_3279_4442 385
119 3300046491 Ga0495584_0043320 Ga0495584_0043320_310_1473 385
120 3300046499 Ga0495594_0000403 Ga0495594_0000403_12400_13746 385
121 3300046501 Ga0495607_0033434 Ga0495607_0033434_522_1685 385
122 3300046506 Ga0495583_0064152 Ga0495583_0064152_288_1451 385
123 3300046507 Ga0495606_0014122 Ga0495606_0014122_3376_4539 385
124 3300046511 Ga0495608_0180306 Ga0495608_0180306_24_1202 385
125 3300046513 Ga0495616_0093536 Ga0495616_0093536_197_1360 385
126 3300046514 Ga0495618_0019701 Ga0495618_0019701_726_1889 385
127 3300046518 Ga0495631_0012545 Ga0495631_0012545_660_1823 385
128 3300046522 Ga0495643_0004520 Ga0495643_0004520_312_1475 385
129 3300046524 Ga0495648_0081958 Ga0495648_0081958_523_1686 385
130 3300046528 Ga0495642_0011325 Ga0495642_0011325_953_2116 385
131 3300046529 Ga0495652_0044130 Ga0495652_0044130_768_1931 385
132 3300046530 Ga0495654_0036786 Ga0495654_0036786_98_1261 385
133 3300046538 Ga0495609_0002638 Ga0495609_0002638_6597_7760 385
134 3300046557 Ga0495622_0002748 Ga0495622_0002748_2031_3377 385
135 3300046558 Ga0495633_0111131 Ga0495633_0111131_72_1235 385
136 3300046648 Ga0495611_0004291 Ga0495611_0004291_1013_2176 385
137 3300046660 Ga0495625_0142731 Ga0495625_0142731_184_1347 385
138 3300046663 Ga0495635_0028709 Ga0495635_0028709_128_1291 385
139 3300046674 Ga0495588_0059870 Ga0495588_0059870_660_1844 385
140 3300046679 Ga0495623_0026760 Ga0495623_0026760_525_1688 385
141 3300046680 Ga0495646_0032534 Ga0495646_0032534_131_1294 385
142 3300046690 Ga0495624_0150179 Ga0495624_0150179_190_1353 385
143 3300046692 Ga0495671_0106492 Ga0495671_0106492_22_1185 385
144 3300046809 Ga0495600_0040475 Ga0495600_0040475_50_1213 385
145 3300046810 Ga0495660_0087672 Ga0495660_0087672_255_1418 385
146 3300047318 Ga0495636_0016016 Ga0495636_0016016_808_1971 385
147 3300047318 Ga0495636_0032948 Ga0495636_0032948_280_1446 385
148 3300047319 Ga0495674_0143466 Ga0495674_0143466_651_1829 385
149 3300047319 Ga0495674_0198293 Ga0495674_0198293_277_1440 385
150 3300047321 Ga0495676_0016491 Ga0495676_0016491_2520_3683 385
151 3300047321 Ga0495676_0031399 Ga0495676_0031399_1758_3104 385
152 3300047321 Ga0495676_0108334 Ga0495676_0108334_803_1996 385
153 3300047322 Ga0495680_0012257 Ga0495680_0012257_5904_7067 385
154 3300047443 Ga0495687_010277 Ga0495687_010277_1682_2845 385
155 3300047444 Ga0495675_0009888 Ga0495675_0009888_2555_3718 385
156 3300047447 Ga0495685_001019 Ga0495685_001019_5516_6694 385
157 3300047471 Ga0495684_0041743 Ga0495684_0041743_766_1929 385
158 3300049571 Ga0501034_0262299 Ga0501034_0262299_73_1257 385
159 3300050489 nmdc:mga03683_27214_c1 nmdc:mga03683_27214_c1_176_1372 385
160 3300050491 nmdc:mga00v17_1037_c1 nmdc:mga00v17_1037_c1_9446_10642 385
161 3300050508 nmdc:mga09592_211935_c1 nmdc:mga09592_211935_c1_176_1360 385
162 3300053139 Ga0500568_0000031 Ga0500568_0000031_140788_141972 385
163 3300053153 Ga0500616_0011883 Ga0500616_0011883_1731_2918 385
164 3300031649 Ga0307514_10192606 Ga0307514_101926061 386
165 iso_pu_bacteria 2616644941 2616904896 386
166 3300047318 Ga0495636_0002567 Ga0495636_0002567_1716_2909 387
167 iso_pu_bacteria 8054160619 8054167338 387
168 3300025302 Ga0207426_1002209 Ga0207426_10022093 389
169 3300046455 Ga0495603_0000349 Ga0495603_0000349_18081_19283 389
170 iso_pu_bacteria 2997451912 2997459127 389
171 iso_pu_bacteria 2867475112 2867475513 391
172 3300030522 Ga0307512_10032438 Ga0307512_100324384 393
173 3300031616 Ga0307508_10004175 Ga0307508_100041757 393
174 3300025302 Ga0207426_1003649 Ga0207426_10036493 394
175 3300003354 JGI25160J50197_1004621 JGI25160J50197_10046216 395
176 3300025302 Ga0207426_1005449 Ga0207426_10054495 395
177 3300025302 Ga0207426_1016201 Ga0207426_10162011 395

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

284

441

0.95

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

179

271

0.89

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

54

175

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.9221 5 393
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.9198 5 393
4x28-assembly1.cif.gz_B crystal structure of the chse4-chse5 complex from mycobacterium tuberculosis 0.9158 1 393
4x28-assembly1.cif.gz_B crystal structure of the chse4-chse5 complex from mycobacterium tuberculosis 0.9135 1 393
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.9128 1 393
ID Description Score Start End Superfamily
2dvlA03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9365 233 384 1.20.140.10
af_K7V5S9_412_555_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9346 237 383 1.20.140.10
1ukwB03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9327 230 385 1.20.140.10
3pfdC03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9325 233 384 1.20.140.10
af_B4FL28_243_386_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9317 237 383 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9527 131 243 GO:0005886
GO:0016627
AF-X8B122-F1-model_v4 deleted 0.9502 107 366
AF-A0A3D5WFH0-F1-model_v4 Acyl-CoA dehydrogenase 0.9491 172 384 GO:0003995
GO:0005737
GO:0033539
AF-X0V8Y6-F1-model_v4 Acyl-CoA oxidase/dehydrogenase middle domain-containing protein 0.946 90 375 GO:0003995
GO:0005886
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9438 131 243 GO:0005886
GO:0016627

Feature Viewer

pLDDT pTM Quality
89.12 0.86 High
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Predicted Structure (AlphaFold2)

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