F269273

General Info

Members Datasets Scaffolds Average Seq Length
177 131 145 380

Family's Representative Sequence

Representative Sequence 3300000549|LJQas_1000846|LJQas_10008464
Length 425
Sequence MTPGPGVLPEPQPASAVRGQLPLPEDRQPVIIAARRTPLCRANGALKQLHAHELLAPVLRSLLSADDPGTGARSGPGIEPGAVTDVVIGNAVGAGGNVARLAALAAGLPVSVPGITVDRQCGSGLDAIVLASGLVAAGNGGVYLAGGVESISTAPLRAHRSQAGTPEFFRRAQFAPPSHGDPDMGVAAENVAARFGVSRARQDAFALRSHRRALAAAGAGAFDDELLPITAGSGSGGSITVSADDGPRPSLTPALLARFAPVFSAGGTVTAGNSCFDADGAAAVVITSLARARELGARDGLLVLGTDTAGVDPRLLGIGAAAAAERLLAAQGLTAGEVGLVEFNEAFASQALACLDQLGIDPLRVNLDGGALALGHAYGASGAVLVTRLLAQARRNPVEGQLALALVSIAGGMGTAALLGYRRLS

Samples

Sample ID Description Type Environment
1 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
2 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
3 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
4 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
5 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
6 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
7 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
8 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
9 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
10 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
11 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
12 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
13 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
14 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
15 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
16 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
17 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
18 2920879853 Kocuria salina CV6 Isolate Unclassified
19 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
20 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
21 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
22 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
23 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
24 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
25 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
26 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
27 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
28 2965761152 Bacillus sp. COPE52 Isolate Unclassified
29 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
30 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
31 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
32 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
33 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
34 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
35 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
36 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
37 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
38 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
39 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
45 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
46 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
47 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
48 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
49 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
71 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
79 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
83 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
84 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
85 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
86 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
87 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
88 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
89 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
90 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
91 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
92 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
93 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
94 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
95 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
96 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
97 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
98 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
101 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
102 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
103 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
104 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
105 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
106 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
107 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
108 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
109 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
129 8023438354 Bacillus sp. BH2 Isolate Unclassified
130 8023444577 Bacillus sp. BH32 Isolate Unclassified
131 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.92
Metatranscriptomes 0
Isolates 18.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.04
Nodule 1.13
Rhizoplane 9.04
Rhizosphere 71.19
Stem 0
Stem Tuber 0
Unclassified 9.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000846 3300000549 Bacteria 4793
2 LJQas_1005860 3300000549 Bacteria 1544
3 JGI25151J46595_10012430 3300003187 Bacteria 3873
4 JGI25151J46595_10013615 3300003187 Bacteria 3654
5 JGI25151J46595_10019849 3300003187 Bacteria 2844
6 JGI25151J46595_10034519 3300003187 Bacteria 1933
7 Ga0055540_1003615 3300003792 Bacteria 7380
8 Ga0055540_1010058 3300003792 Bacteria 3185
9 Ga0070676_10087801 3300005328 Bacteria 1899
10 Ga0070677_10009470 3300005333 Bacteria 3303
11 Ga0070668_100002919 3300005347 Bacteria 12638
12 Ga0070668_100045233 3300005347 Bacteria 3378
13 Ga0070675_100024266 3300005354 Bacteria 4856
14 Ga0070674_100049021 3300005356 Bacteria 2901
15 Ga0070667_100176053 3300005367 Bacteria 1891
16 Ga0070678_100026694 3300005456 Bacteria 3909
17 Ga0070672_100002097 3300005543 Bacteria 12569
18 Ga0068860_100047087 3300005843 Bacteria 4110
19 Ga0075432_10001297 3300006058 Bacteria 8068
20 Ga0075428_100110616 3300006844 Bacteria 2993
21 Ga0105251_10011566 3300009011 Bacteria 5037
22 Ga0105244_10001987 3300009036 Bacteria 15772
23 Ga0105244_10010211 3300009036 Bacteria 5704
24 Ga0105250_10002123 3300009092 Bacteria 10169
25 Ga0105250_10013517 3300009092 Bacteria 3364
26 Ga0105246_10013681 3300011119 Bacteria 5091
27 Ga0157378_10105222 3300013297 Bacteria 2580
28 Ga0209147_102427 3300025229 Bacteria 4647
29 Ga0209673_1022623 3300025273 Bacteria 2163
30 Ga0209130_1001100 3300025284 Bacteria 20059
31 Ga0209025_1000101 3300025294 Bacteria 228507
32 Ga0209025_1008027 3300025294 Bacteria 7688
33 Ga0209025_1013367 3300025294 Bacteria 5166
34 Ga0209025_1023310 3300025294 Bacteria 3240
35 Ga0209025_1059576 3300025294 Bacteria 1440
36 Ga0209051_1005933 3300025303 Bacteria 7009
37 Ga0209051_1014023 3300025303 Bacteria 3768
38 Ga0207697_10026771 3300025315 Bacteria 2358
39 Ga0207696_1001283 3300025711 Bacteria 14014
40 Ga0207655_1003453 3300025728 Bacteria 11748
41 Ga0207655_1012967 3300025728 Bacteria 4821
42 Ga0207655_1024500 3300025728 Bacteria 2955
43 Ga0207645_10110392 3300025907 Bacteria 1780
44 Ga0207681_10043083 3300025923 Bacteria 3019
45 Ga0207650_10027701 3300025925 Bacteria 4057
46 Ga0207709_10086443 3300025935 Bacteria 2036
47 Ga0207669_10072420 3300025937 Bacteria 2170
48 Ga0207691_10001023 3300025940 Bacteria 27673
49 Ga0207689_10073736 3300025942 Bacteria 2804
50 Ga0207668_10039458 3300025972 Bacteria 3178
51 Ga0207668_10057629 3300025972 Bacteria 2711
52 Ga0207658_10097438 3300025986 Bacteria 2296
53 Ga0207703_10081652 3300026035 Bacteria 2695
54 Ga0207683_10010074 3300026121 Bacteria 8064
55 Ga0268265_10014437 3300028380 Bacteria 5382
56 Ga0268264_10057425 3300028381 Bacteria 3255
57 Ga0268264_10233755 3300028381 Bacteria 1699
58 Ga0237817_10216 3300030083 Bacteria 14837
59 Ga0237817_10353 3300030083 Bacteria 8474
60 Ga0307509_10099697 3300031507 Bacteria 2945
61 Ga0307408_100001200 3300031548 Bacteria 19575
62 Ga0307408_100038086 3300031548 Bacteria 3391
63 Ga0307408_100128423 3300031548 Bacteria 1974
64 Ga0307413_10083882 3300031824 Bacteria 2052
65 Ga0307410_10003633 3300031852 Bacteria 7780
66 Ga0307407_10004442 3300031903 Bacteria 5953
67 Ga0307407_10043574 3300031903 Bacteria 2523
68 Ga0307412_10009907 3300031911 Bacteria 5479
69 Ga0307412_10046761 3300031911 Bacteria 2838
70 Ga0307412_10051002 3300031911 Bacteria 2733
71 Ga0307412_10059390 3300031911 Bacteria 2563
72 Ga0307416_100024749 3300032002 Bacteria 4388
73 Ga0307416_100062760 3300032002 Bacteria 3040
74 Ga0307416_100118785 3300032002 Bacteria 2350
75 Ga0307416_100138092 3300032002 Bacteria 2209
76 Ga0307411_10015693 3300032005 Bacteria 4264
77 Ga0307507_10017176 3300033179 Bacteria 8339
78 Ga0395900_0402108 3300037418 Bacteria 1333
79 Ga0395898_0063931 3300037466 Bacteria 3570
80 Ga0237819_00858 3300038705 Bacteria 9575
81 Ga0439436_0001421 3300041404 Bacteria 6924
82 Ga0439436_0005694 3300041404 Bacteria 3818
83 Ga0439438_014827 3300041405 Bacteria 2310
84 Ga0439466_0023152 3300041411 Bacteria 2187
85 Ga0439433_0004167 3300041999 Bacteria 3106
86 Ga0439442_000043 3300042002 Bacteria 28612
87 Ga0439442_000123 3300042002 Bacteria 19485
88 Ga0439442_000439 3300042002 Bacteria 9421
89 Ga0439442_002904 3300042002 Bacteria 3376
90 Ga0439432_005504 3300042006 Bacteria 4555
91 Ga0439449_0000442 3300042007 Bacteria 15380
92 Ga0439449_0003186 3300042007 Bacteria 6392
93 Ga0439449_0015771 3300042007 Bacteria 2840
94 Ga0439449_0033937 3300042007 Bacteria 1900
95 Ga0439452_016784 3300042010 Bacteria 1981
96 Ga0439457_001885 3300042014 Bacteria 6184
97 Ga0450919_002002 3300042121 Bacteria 2646
98 Ga0450919_003027 3300042121 Bacteria 2142
99 Ga0450920_001251 3300042122 Bacteria 4181
100 Ga0439446_0008171 3300042156 Bacteria 2771
101 Ga0450909_000270 3300042185 Bacteria 6306
102 Ga0439434_0000084 3300042435 Bacteria 23352
103 Ga0439434_0000600 3300042435 Bacteria 10371
104 Ga0450918_000353 3300042531 Bacteria 10143
105 Ga0495629_0064740 3300046459 Bacteria 2552
106 Ga0495580_0010254 3300046472 Bacteria 7308
107 Ga0495639_0037873 3300046475 Bacteria 2164
108 Ga0495664_0016543 3300046477 Bacteria 4204
109 Ga0495594_0046174 3300046499 Bacteria 2392
110 Ga0495665_0089276 3300046531 Bacteria 1619
111 Ga0495586_0010169 3300046535 Bacteria 5008
112 Ga0495586_0061983 3300046535 Bacteria 2035
113 Ga0495633_0099756 3300046558 Bacteria 1348
114 Ga0495635_0106020 3300046663 Bacteria 1920
115 Ga0495588_0027806 3300046674 Bacteria 2828
116 Ga0495588_0078581 3300046674 Bacteria 1721
117 Ga0495600_0016050 3300046809 Bacteria 4747
118 Ga0495581_0030285 3300047315 Bacteria 3136
119 Ga0495604_0100157 3300047317 Bacteria 2131
120 Ga0495685_035847 3300047447 Bacteria 1704
121 Ga0496100_0076128 3300048903 Bacteria 2252
122 Ga0496101_0030523 3300048904 Bacteria 3780
123 Ga0496102_0047911 3300048905 Bacteria 3885
124 Ga0496102_0097052 3300048905 Bacteria 2733
125 Ga0496102_0216460 3300048905 Bacteria 1805
126 Ga0496103_0030685 3300048906 Bacteria 3272
127 Ga0496103_0132973 3300048906 Bacteria 1589
128 Ga0496105_0006898 3300048908 Bacteria 8742
129 Ga0496106_0048891 3300048909 Bacteria 3185
130 Ga0496109_0083116 3300048912 Bacteria 2953
131 Ga0496110_0033678 3300048913 Bacteria 4433
132 Ga0496110_0496311 3300048913 Bacteria 1111
133 Ga0496111_0204222 3300048914 Bacteria 1468
134 Ga0496112_0032672 3300048915 Bacteria 5053
135 Ga0496114_0026765 3300048917 Bacteria 4724
136 Ga0496114_0133245 3300048917 Bacteria 2147
137 Ga0501032_0002322 3300049569 Bacteria 14909
138 Ga0501034_0000016 3300049571 Bacteria 289751
139 Ga0501037_0009004 3300049573 Bacteria 7312
140 Ga0501037_0012496 3300049573 Bacteria 6255
141 Ga0501037_0020682 3300049573 Bacteria 4859
142 Ga0501038_0045343 3300049574 Bacteria 3817
143 Ga0501038_0057161 3300049574 Bacteria 3349
144 Ga0501039_0026993 3300049575 Bacteria 4414
145 Ga0501043_0019957 3300049579 Bacteria 5259

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031911 Ga0307412_10009907 Ga0307412_100099073 323
2 3300013297 Ga0157378_10105222 Ga0157378_101052223 329
3 3300031903 Ga0307407_10004442 Ga0307407_100044421 329
4 3300032002 Ga0307416_100024749 Ga0307416_1000247492 329
5 3300033179 Ga0307507_10017176 Ga0307507_100171766 347
6 3300028381 Ga0268264_10233755 Ga0268264_102337551 348
7 3300031507 Ga0307509_10099697 Ga0307509_100996973 348
8 3300005347 Ga0070668_100002919 Ga0070668_1000029191 349
9 3300025972 Ga0207668_10039458 Ga0207668_100394581 349
10 3300028380 Ga0268265_10014437 Ga0268265_100144374 349
11 3300042002 Ga0439442_000439 Ga0439442_000439_455_1528 353
12 3300031548 Ga0307408_100128423 Ga0307408_1001284232 354
13 3300031824 Ga0307413_10083882 Ga0307413_100838822 354
14 3300032002 Ga0307416_100138092 Ga0307416_1001380922 354
15 3300046558 Ga0495633_0099756 Ga0495633_0099756_14_1090 356
16 3300048913 Ga0496110_0496311 Ga0496110_0496311_11_1081 356
17 3300005347 Ga0070668_100045233 Ga0070668_1000452333 357
18 3300005367 Ga0070667_100176053 Ga0070667_1001760532 357
19 3300005843 Ga0068860_100047087 Ga0068860_1000470873 357
20 3300025942 Ga0207689_10073736 Ga0207689_100737363 357
21 3300025972 Ga0207668_10057629 Ga0207668_100576292 357
22 3300025986 Ga0207658_10097438 Ga0207658_100974382 357
23 3300026035 Ga0207703_10081652 Ga0207703_100816522 357
24 3300028381 Ga0268264_10057425 Ga0268264_100574252 357
25 3300041405 Ga0439438_014827 Ga0439438_014827_946_2061 357
26 3300042006 Ga0439432_005504 Ga0439432_005504_3185_4300 357
27 3300042010 Ga0439452_016784 Ga0439452_016784_658_1773 357
28 3300042014 Ga0439457_001885 Ga0439457_001885_3218_4333 357
29 iso_pu_bacteria 2695420987 2698321635 358
30 iso_pu_bacteria 2703719227 2705995485 358
31 iso_pu_bacteria 2718218445 2721506749 358
32 iso_pu_bacteria 2947426588 2947430320 358
33 iso_pu_bacteria 2965761152 2965764873 358
34 iso_pu_bacteria 2979083700 2979087212 358
35 iso_pu_bacteria 8023438354 8023440365 358
36 iso_pu_bacteria 8023444577 8023447276 358
37 3300006844 Ga0075428_100110616 Ga0075428_1001106162 360
38 iso_pu_bacteria 2919034639 2919034973 360
39 3300003187 JGI25151J46595_10012430 JGI25151J46595_100124302 362
40 3300003187 JGI25151J46595_10013615 JGI25151J46595_100136153 362
41 3300003187 JGI25151J46595_10019849 JGI25151J46595_100198492 362
42 3300003187 JGI25151J46595_10034519 JGI25151J46595_100345192 362
43 3300009036 Ga0105244_10001987 Ga0105244_100019879 362
44 3300009092 Ga0105250_10002123 Ga0105250_100021234 362
45 3300009092 Ga0105250_10013517 Ga0105250_100135172 362
46 3300025229 Ga0209147_102427 Ga0209147_1024273 362
47 3300025284 Ga0209130_1001100 Ga0209130_100110011 362
48 3300025294 Ga0209025_1000101 Ga0209025_100010152 362
49 3300025294 Ga0209025_1008027 Ga0209025_10080273 362
50 3300025294 Ga0209025_1013367 Ga0209025_10133674 362
51 3300025294 Ga0209025_1023310 Ga0209025_10233101 362
52 3300025294 Ga0209025_1059576 Ga0209025_10595762 362
53 3300025711 Ga0207696_1001283 Ga0207696_10012834 362
54 3300025728 Ga0207655_1003453 Ga0207655_10034534 362
55 3300030083 Ga0237817_10216 Ga0237817_102169 362
56 3300030083 Ga0237817_10353 Ga0237817_1035312 362
57 3300038705 Ga0237819_00858 Ga0237819_00858_8030_9121 362
58 3300005333 Ga0070677_10009470 Ga0070677_100094703 363
59 3300005354 Ga0070675_100024266 Ga0070675_1000242664 363
60 3300005356 Ga0070674_100049021 Ga0070674_1000490211 363
61 3300005543 Ga0070672_100002097 Ga0070672_1000020972 363
62 3300009011 Ga0105251_10011566 Ga0105251_100115664 363
63 3300025728 Ga0207655_1024500 Ga0207655_10245003 363
64 3300025923 Ga0207681_10043083 Ga0207681_100430832 363
65 3300025925 Ga0207650_10027701 Ga0207650_100277012 363
66 3300025935 Ga0207709_10086443 Ga0207709_100864432 363
67 3300025937 Ga0207669_10072420 Ga0207669_100724201 363
68 3300025940 Ga0207691_10001023 Ga0207691_1000102310 363
69 3300048905 Ga0496102_0047911 Ga0496102_0047911_649_1800 363
70 3300048906 Ga0496103_0030685 Ga0496103_0030685_791_1942 363
71 3300048909 Ga0496106_0048891 Ga0496106_0048891_1212_2363 363
72 iso_pu_bacteria 2751185782 2753265815 368
73 iso_pu_bacteria 2902837492 2902842568 369
74 3300031852 Ga0307410_10003633 Ga0307410_100036332 370
75 3300031903 Ga0307407_10043574 Ga0307407_100435742 370
76 3300032005 Ga0307411_10015693 Ga0307411_100156934 370
77 3300046475 Ga0495639_0037873 Ga0495639_0037873_985_2136 370
78 3300048903 Ga0496100_0076128 Ga0496100_0076128_857_2044 372
79 3300048904 Ga0496101_0030523 Ga0496101_0030523_840_2027 372
80 3300048917 Ga0496114_0026765 Ga0496114_0026765_3087_4274 372
81 iso_pu_bacteria 2675902999 2676202324 372
82 iso_pu_bacteria 2773857921 2774846900 372
83 3300003792 Ga0055540_1003615 Ga0055540_10036157 373
84 3300003792 Ga0055540_1010058 Ga0055540_10100583 373
85 3300025273 Ga0209673_1022623 Ga0209673_10226231 373
86 3300025303 Ga0209051_1014023 Ga0209051_10140235 373
87 3300046459 Ga0495629_0064740 Ga0495629_0064740_473_1663 373
88 3300046477 Ga0495664_0016543 Ga0495664_0016543_2454_3644 373
89 3300046499 Ga0495594_0046174 Ga0495594_0046174_1048_2238 373
90 3300046531 Ga0495665_0089276 Ga0495665_0089276_219_1409 373
91 3300046535 Ga0495586_0061983 Ga0495586_0061983_151_1341 373
92 3300046663 Ga0495635_0106020 Ga0495635_0106020_659_1849 373
93 3300046809 Ga0495600_0016050 Ga0495600_0016050_3355_4545 373
94 3300047317 Ga0495604_0100157 Ga0495604_0100157_134_1324 373
95 3300042007 Ga0439449_0000442 Ga0439449_0000442_7345_8502 375
96 3300046535 Ga0495586_0010169 Ga0495586_0010169_3349_4572 376
97 3300046674 Ga0495588_0078581 Ga0495588_0078581_257_1432 378
98 3300049573 Ga0501037_0009004 Ga0501037_0009004_816_1967 380
99 3300041404 Ga0439436_0005694 Ga0439436_0005694_1884_3068 381
100 3300041411 Ga0439466_0023152 Ga0439466_0023152_683_1867 381
101 3300041999 Ga0439433_0004167 Ga0439433_0004167_98_1282 381
102 3300042002 Ga0439442_002904 Ga0439442_002904_2163_3347 381
103 3300042007 Ga0439449_0003186 Ga0439449_0003186_751_1935 381
104 3300046472 Ga0495580_0010254 Ga0495580_0010254_5150_6319 381
105 3300048905 Ga0496102_0097052 Ga0496102_0097052_458_1627 381
106 3300048915 Ga0496112_0032672 Ga0496112_0032672_3137_4306 381
107 3300026121 Ga0207683_10010074 Ga0207683_100100748 382
108 3300005456 Ga0070678_100026694 Ga0070678_1000266943 383
109 3300011119 Ga0105246_10013681 Ga0105246_100136813 383
110 3300025315 Ga0207697_10026771 Ga0207697_100267712 383
111 3300048908 Ga0496105_0006898 Ga0496105_0006898_4425_5702 383
112 3300048917 Ga0496114_0133245 Ga0496114_0133245_697_1974 383
113 3300049574 Ga0501038_0045343 Ga0501038_0045343_2546_3706 383
114 3300025907 Ga0207645_10110392 Ga0207645_101103922 384
115 3300047447 Ga0495685_035847 Ga0495685_035847_212_1372 384
116 iso_pu_bacteria 2920879853 2920883016 384
117 3300049573 Ga0501037_0020682 Ga0501037_0020682_3183_4364 385
118 3300049574 Ga0501038_0057161 Ga0501038_0057161_1523_2704 385
119 3300049575 Ga0501039_0026993 Ga0501039_0026993_2284_3465 385
120 iso_pu_bacteria 2910809715 2910813263 385
121 3300006058 Ga0075432_10001297 Ga0075432_100012974 387
122 3300047315 Ga0495581_0030285 Ga0495581_0030285_514_1677 387
123 3300048913 Ga0496110_0033678 Ga0496110_0033678_769_1956 387
124 3300048914 Ga0496111_0204222 Ga0496111_0204222_191_1378 387
125 3300049573 Ga0501037_0012496 Ga0501037_0012496_2259_3422 387
126 iso_pu_bacteria 2893684298 2893685700 387
127 3300032002 Ga0307416_100062760 Ga0307416_1000627603 388
128 iso_pu_bacteria 2808606366 2808879341 388
129 iso_pu_bacteria 2953998280 2954000430 388
130 iso_pu_bacteria 2904497146 2904498241 389
131 iso_pu_bacteria 2904776348 2904777603 390
132 iso_pu_bacteria 8054107350 8054110173 390
133 iso_pu_bacteria 2919391150 2919394807 391
134 3300031911 Ga0307412_10059390 Ga0307412_100593902 392
135 3300032002 Ga0307416_100118785 Ga0307416_1001187852 392
136 3300037466 Ga0395898_0063931 Ga0395898_0063931_965_2152 392
137 3300031911 Ga0307412_10051002 Ga0307412_100510022 393
138 3300042002 Ga0439442_000043 Ga0439442_000043_10102_11286 393
139 3300042007 Ga0439449_0015771 Ga0439449_0015771_1440_2624 393
140 3300042121 Ga0450919_003027 Ga0450919_003027_121_1305 393
141 3300042435 Ga0439434_0000084 Ga0439434_0000084_19589_20773 393
142 3300042531 Ga0450918_000353 Ga0450918_000353_5896_7080 393
143 iso_pu_bacteria 2932426870 2932428287 393
144 3300046674 Ga0495588_0027806 Ga0495588_0027806_1460_2665 394
145 iso_pu_bacteria 2945941187 2945943122 394
146 iso_pu_bacteria 2939598168 2939601324 396
147 3300042002 Ga0439442_000123 Ga0439442_000123_748_1956 398
148 3300042007 Ga0439449_0033937 Ga0439449_0033937_578_1804 398
149 3300042121 Ga0450919_002002 Ga0450919_002002_617_1855 398
150 3300042122 Ga0450920_001251 Ga0450920_001251_161_1399 398
151 3300042156 Ga0439446_0008171 Ga0439446_0008171_909_2147 398
152 3300042185 Ga0450909_000270 Ga0450909_000270_3191_4429 398
153 3300042435 Ga0439434_0000600 Ga0439434_0000600_6729_7967 398
154 3300031548 Ga0307408_100001200 Ga0307408_1000012002 400
155 iso_pu_bacteria 2857740372 2857742130 400
156 iso_pu_bacteria 2919538618 2919540433 400
157 iso_pu_bacteria 2933418574 2933421126 400
158 iso_pu_bacteria 2939647034 2939648695 400
159 iso_pu_bacteria 2939674588 2939675256 400
160 3300009036 Ga0105244_10010211 Ga0105244_100102113 401
161 3300025303 Ga0209051_1005933 Ga0209051_10059336 401
162 3300025728 Ga0207655_1012967 Ga0207655_10129675 401
163 3300031548 Ga0307408_100038086 Ga0307408_1000380864 401
164 3300041404 Ga0439436_0001421 Ga0439436_0001421_2886_4103 403
165 3300048905 Ga0496102_0216460 Ga0496102_0216460_468_1688 403
166 3300048906 Ga0496103_0132973 Ga0496103_0132973_269_1489 403
167 3300048912 Ga0496109_0083116 Ga0496109_0083116_517_1737 403
168 3300005328 Ga0070676_10087801 Ga0070676_100878012 404
169 iso_pu_bacteria 2919059106 2919059800 404
170 iso_pu_bacteria 2945956166 2945959089 404
171 3300037418 Ga0395900_0402108 Ga0395900_0402108_77_1309 405
172 3300049579 Ga0501043_0019957 Ga0501043_0019957_1904_3139 408
173 3300049569 Ga0501032_0002322 Ga0501032_0002322_5919_7160 409
174 3300049571 Ga0501034_0000016 Ga0501034_0000016_78503_79744 409
175 3300031911 Ga0307412_10046761 Ga0307412_100467612 410
176 3300000549 LJQas_1005860 LJQas_10058602 413
177 3300000549 LJQas_1000846 LJQas_10008464 425

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02803

Thiolase_C

Thiolase, C-terminal domain

301

421

0.95

PF00108

Thiolase_N

Thiolase, N-terminal domain

29

290

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4e1l-assembly1.cif.gz_C crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.95 27 420
4e1l-assembly1.cif.gz_D crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.9477 27 420
4e1l-assembly1.cif.gz_D crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.9376 27 420
4e1l-assembly1.cif.gz_C crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.9372 27 420
5lp7-assembly1.cif.gz_H crystal structure of 3-ketoacyl-coa thiolase (mmga) from bacillus subtilis. 0.9246 27 420
ID Description Score Start End Superfamily
af_A0A0G2KML7_1_235_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9616 184 420 3.40.47.10
af_P76461_265_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9594 303 421 3.40.47.10
5lp7F02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9575 182 418 3.40.47.10
af_A0A0G2KML7_1_235_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9536 184 420 3.40.47.10
6bjaA02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9486 182 418 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A0K2RT54-F1-model_v4 Acetyl-CoA acetyltransferase 0.9833 257 425 GO:0003988
GO:0006635
GO:0010124
AF-A0A7U9C4I7-F1-model_v4 Acetyl-CoA C-acyltransferase 0.9695 203 420 GO:0016747
AF-A0A2X1PK48-F1-model_v4 Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.9689 184 421 GO:0003985
AF-A0A1V5QAS3-F1-model_v4 acetyl-CoA C-acetyltransferase (EC 2.3.1.9) (Acetoacetyl-CoA thiolase) 0.9678 182 420 GO:0003985
AF-A0A532U5E8-F1-model_v4 Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.9673 184 420 GO:0003985

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pLDDT pTM Quality
87.5 0.89 High
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Predicted Structure (AlphaFold2)

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