F268234

General Info

Members Datasets Scaffolds Average Seq Length
176 116 162 429

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10012000|Ga0105237_100120002
Length 459
Sequence MSLLILHDCRLPIHDQKLIMRKIIYILIAVAFVACRKDNSPAFDKPADDRINETLSKYQSVITGAPNGWTATLVTKIGNTYSFYFQFNDSNRVVMYCDYDTTTASIPRESSYRLKSLQQPSLLFDTYSYIHLLADPDPNVNGGIAGNGLVSDFEFSIDTVTTDSIALTGRFNGSSAVLHKASPQERAAWENKQVGNTVKNFMGMGKIQNYFKRLTYNSTEYELLNYPAYKTLLITWKDGGGTPHSIATSYYISAAGVQFKSPVTNGSQTINGFTITGWDDVSATLKVNVNNTAAAIAGAIKPINPDLAAARRWWQTGADAHSAWISATGFHVNGVDDAYGVRTLKTDTSTYYALVYWAGIKPASGPSFDAFTPYYYIPASNSVDWNYGTGQQPQFQTDGRVVFSYLGDLTAGVYPASGPAFQTKQQLFITNGYWFVQTGATTYDMVSAKDAKAWITWQQ

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
3 2818991444 Filimonas endophytica 3197 Isolate Unclassified
4 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
5 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
6 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
7 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
8 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
9 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
10 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
11 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
12 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
13 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
17 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
18 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
21 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
22 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
51 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
53 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
54 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
56 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
78 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
79 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
80 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
81 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
89 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
90 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
91 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
94 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
97 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
98 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
100 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
103 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
104 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
105 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
106 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
107 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
108 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
109 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
110 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
111 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
112 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
113 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
114 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
115 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
116 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.61
Metatranscriptomes 0
Isolates 7.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.73
Nodule 0
Rhizoplane 0
Rhizosphere 55.68
Stem 0
Stem Tuber 0
Unclassified 21.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1000005 3300002738 Bacteria 345115
2 rootH1_10017121 3300003316 Bacteria 12818
3 rootH1_10045200 3300003316 Bacteria 3401
4 rootH2_10068412 3300003320 Unclassified 2278
5 rootH2_10086271 3300003320 Bacteria 2719
6 rootL2_10005705 3300003322 Bacteria 15707
7 rootL2_10022189 3300003322 Bacteria 5190
8 rootL2_10041267 3300003322 Unclassified 2200
9 rootL2_10041268 3300003322 Bacteria 1668
10 rootL2_10093632 3300003322 Bacteria 10591
11 rootL2_10156994 3300003322 Unclassified 1709
12 rootL2_10343543 3300003322 Bacteria 1655
13 rootH1_10010378 3300003323 Bacteria 33865
14 rootH1_10038409 3300003323 Bacteria 20931
15 rootH1_10168945 3300003323 Bacteria 5615
16 JGI25160J50197_1006053 3300003354 Bacteria 4945
17 Ga0055542_1004502 3300003762 Bacteria 3364
18 Ga0055531_10000045 3300003794 Bacteria 132131
19 Ga0055531_10000153 3300003794 Bacteria 80166
20 Ga0068869_100006469 3300005334 Bacteria 7434
21 Ga0068869_100010853 3300005334 Bacteria 5957
22 Ga0070666_10015339 3300005335 Unclassified 4886
23 Ga0068868_100015402 3300005338 Bacteria 5654
24 Ga0070661_100212292 3300005344 Unclassified 1482
25 Ga0070673_100009307 3300005364 Bacteria 6591
26 Ga0070678_100023797 3300005456 Unclassified 4088
27 Ga0068867_100011567 3300005459 Bacteria 6231
28 Ga0068853_100092345 3300005539 Unclassified 2663
29 Ga0068853_100218874 3300005539 Bacteria 1738
30 Ga0070672_100142702 3300005543 Unclassified 1977
31 Ga0070665_100069100 3300005548 Unclassified 3540
32 Ga0068855_100098620 3300005563 Bacteria 3365
33 Ga0068855_100179525 3300005563 Bacteria 2394
34 Ga0068857_100045157 3300005577 Bacteria 3908
35 Ga0068857_100059881 3300005577 Bacteria 3383
36 Ga0068854_100034709 3300005578 Unclassified 3525
37 Ga0068856_100022385 3300005614 Bacteria 6143
38 Ga0068856_100212947 3300005614 Bacteria 1948
39 Ga0068859_100029464 3300005617 Bacteria 5507
40 Ga0068866_10045387 3300005718 Unclassified 2204
41 Ga0068861_100055839 3300005719 Bacteria 3012
42 Ga0068860_100004989 3300005843 Bacteria 13521
43 Ga0068860_100028672 3300005843 Bacteria 5358
44 Ga0068862_100002828 3300005844 Bacteria 15221
45 Ga0068862_100086785 3300005844 Bacteria 2721
46 Ga0075366_10021793 3300006195 Bacteria 3726
47 Ga0097621_100006627 3300006237 Bacteria 8229
48 Ga0068865_100031260 3300006881 Unclassified 3549
49 Ga0097620_100029464 3300006931 Bacteria 5507
50 Ga0114129_10032770 3300009147 Bacteria 7342
51 Ga0105241_10023134 3300009174 Bacteria 4606
52 Ga0105237_10012000 3300009545 Bacteria 9152
53 Ga0105237_10040585 3300009545 Bacteria 4693
54 Ga0105249_10059853 3300009553 Unclassified 3494
55 Ga0105249_10179794 3300009553 Bacteria 2057
56 Ga0105239_10001680 3300010375 Bacteria 29168
57 Ga0105239_10005014 3300010375 Bacteria 15634
58 Ga0105239_10090795 3300010375 Bacteria 3370
59 Ga0105239_10396038 3300010375 Bacteria 1562
60 Ga0157374_10121132 3300013296 Bacteria 2525
61 Ga0163162_10100255 3300013306 Bacteria 2987
62 Ga0163163_10257941 3300014325 Unclassified 1794
63 Ga0182005_1002277 3300015265 Bacteria 7031
64 Ga0209258_100247 3300025242 Bacteria 99442
65 Ga0209646_1000017 3300025246 Bacteria 488265
66 Ga0209646_1001850 3300025246 Bacteria 5222
67 Ga0209646_1002293 3300025246 Bacteria 4358
68 Ga0209026_1000314 3300025250 Bacteria 51962
69 Ga0209148_1000207 3300025254 Bacteria 104094
70 Ga0207426_1000363 3300025302 Bacteria 81330
71 Ga0209257_1000001 3300025304 Bacteria 2274655
72 Ga0207688_10019125 3300025901 Unclassified 3729
73 Ga0207680_10009356 3300025903 Bacteria 4857
74 Ga0207645_10008536 3300025907 Bacteria 7141
75 Ga0207659_10061092 3300025926 Unclassified 2715
76 Ga0207686_10040801 3300025934 Unclassified 2825
77 Ga0207669_10011860 3300025937 Unclassified 4260
78 Ga0207704_10022304 3300025938 Unclassified 3390
79 Ga0207691_10031063 3300025940 Bacteria 4989
80 Ga0207689_10002238 3300025942 Bacteria 18123
81 Ga0207689_10005906 3300025942 Bacteria 10842
82 Ga0207689_10091648 3300025942 Bacteria 2497
83 Ga0207667_10033219 3300025949 Bacteria 5551
84 Ga0207667_10063772 3300025949 Bacteria 3850
85 Ga0207712_10109124 3300025961 Bacteria 2072
86 Ga0207640_10042942 3300025981 Unclassified 2886
87 Ga0207639_10175861 3300026041 Bacteria 1817
88 Ga0207648_10010826 3300026089 Bacteria 8620
89 Ga0207674_10003831 3300026116 Bacteria 18337
90 Ga0207674_10054093 3300026116 Unclassified 4088
91 Ga0207675_100003440 3300026118 Bacteria 15478
92 Ga0207675_100074162 3300026118 Unclassified 3184
93 Ga0207683_10124649 3300026121 Unclassified 2314
94 Ga0268265_10023345 3300028380 Bacteria 4359
95 Ga0268264_10011823 3300028381 Bacteria 7195
96 Ga0307513_10086920 3300031456 Bacteria 3203
97 Ga0307513_10098152 3300031456 Bacteria 2962
98 Ga0307513_10180363 3300031456 Bacteria 1976
99 Ga0307509_10015282 3300031507 Bacteria 8970
100 Ga0373927_0024633 3300035695 Bacteria 3934
101 Ga0451853_0599642 3300041512 Bacteria 2321
102 Ga0439457_003145 3300042014 Bacteria 4559
103 Ga0439457_016075 3300042014 Bacteria 1670
104 Ga0439462_0011534 3300042015 Bacteria 2251
105 Ga0466969_0000149 3300044656 Bacteria 37747
106 Ga0466972_0000013 3300044658 Bacteria 229345
107 Ga0466972_0000040 3300044658 Bacteria 133427
108 Ga0466966_0000045 3300044684 Bacteria 92504
109 Ga0466970_0024880 3300044765 Unclassified 3132
110 Ga0466957_0000156 3300044842 Bacteria 29671
111 Ga0466957_0018079 3300044842 Bacteria 4135
112 Ga0466959_0000023 3300045049 Bacteria 124545
113 Ga0495627_008410 3300046453 Bacteria 3872
114 Ga0495650_0009479 3300046471 Bacteria 5529
115 Ga0495633_0000005 3300046558 Bacteria 357644
116 Ga0495668_0001443 3300046616 Bacteria 22991
117 Ga0496121_0000020 3300048924 Bacteria 498732
118 Ga0496126_0006136 3300048929 Bacteria 13467
119 Ga0496126_0032622 3300048929 Bacteria 4905
120 Ga0501034_0019432 3300049571 Bacteria 6949
121 Ga0501034_0274357 3300049571 Viruses 1627
122 Ga0501047_0024238 3300049581 Bacteria 5825
123 Ga0501047_0031126 3300049581 Bacteria 5147
124 Ga0501047_0047299 3300049581 Bacteria 4157
125 Ga0501047_0189435 3300049581 Bacteria 1921
126 Ga0501225_0000182 3300049705 Bacteria 19491
127 Ga0501241_000073 3300049758 Bacteria 22929
128 Ga0501241_000394 3300049758 Bacteria 9572
129 Ga0501035_0210009 3300049822 Bacteria 1666
130 Ga0501044_0306013 3300049823 Bacteria 1517
131 nmdc:mga0k408_130454_c1 3300050493 Bacteria 1492
132 nmdc:mga0k408_31773_c1 3300050493 Bacteria 3016
133 nmdc:mga05p37_1502_c2 3300050507 Bacteria 17494
134 nmdc:mga05p37_24825_c1 3300050507 Bacteria 7287
135 Ga0500578_0000054 3300053086 Bacteria 121082
136 Ga0500578_0000155 3300053086 Bacteria 80380
137 Ga0500578_0021956 3300053086 Bacteria 4100
138 Ga0500644_0000041 3300053088 Bacteria 77645
139 Ga0500644_0000247 3300053088 Bacteria 30626
140 Ga0500644_0007769 3300053088 Bacteria 2805
141 Ga0500646_0003489 3300053090 Bacteria 4030
142 Ga0500583_0000005 3300053092 Bacteria 166480
143 Ga0500583_0000043 3300053092 Bacteria 81313
144 Ga0500583_0000613 3300053092 Bacteria 10624
145 Ga0500583_0010951 3300053092 Bacteria 3393
146 Ga0500583_0015855 3300053092 Bacteria 2993
147 Ga0500583_0040706 3300053092 Unclassified 2106
148 Ga0500562_000036 3300053108 Bacteria 78006
149 Ga0500607_046687 3300053121 Bacteria 2321
150 Ga0500658_0000923 3300053134 Bacteria 11998
151 Ga0500658_0034191 3300053134 Bacteria 2004
152 Ga0500559_0012684 3300053136 Bacteria 3578
153 Ga0500568_0048172 3300053139 Bacteria 1686
154 Ga0500577_0001805 3300053142 Bacteria 5464
155 Ga0500577_0006207 3300053142 Bacteria 3279
156 Ga0500590_061396 3300053148 Bacteria 1887
157 Ga0500616_0015652 3300053153 Bacteria 4330
158 Ga0500616_0031167 3300053153 Bacteria 2922
159 Ga0500622_0000042 3300053156 Bacteria 161253
160 Ga0500622_0000220 3300053156 Bacteria 60029
161 Ga0500622_0000484 3300053156 Bacteria 37287
162 Ga0500661_007089 3300055283 Bacteria 2079

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013306 Ga0163162_10100255 Ga0163162_101002552 350
2 3300044658 Ga0466972_0000040 Ga0466972_0000040_19437_20717 371
3 3300053086 Ga0500578_0000054 Ga0500578_0000054_70993_72291 390
4 3300053156 Ga0500622_0000220 Ga0500622_0000220_16113_17414 393
5 3300025246 Ga0209646_1001850 Ga0209646_10018502 394
6 3300053108 Ga0500562_000036 Ga0500562_000036_14401_15735 394
7 3300013296 Ga0157374_10121132 Ga0157374_101211322 398
8 3300005539 Ga0068853_100218874 Ga0068853_1002188742 399
9 3300026041 Ga0207639_10175861 Ga0207639_101758611 399
10 3300031456 Ga0307513_10086920 Ga0307513_100869202 401
11 3300005563 Ga0068855_100179525 Ga0068855_1001795252 402
12 3300005577 Ga0068857_100045157 Ga0068857_1000451573 402
13 3300005614 Ga0068856_100212947 Ga0068856_1002129472 402
14 3300009174 Ga0105241_10023134 Ga0105241_100231345 402
15 3300009545 Ga0105237_10040585 Ga0105237_100405852 402
16 3300025949 Ga0207667_10063772 Ga0207667_100637723 402
17 3300026116 Ga0207674_10003831 Ga0207674_100038318 402
18 3300044656 Ga0466969_0000149 Ga0466969_0000149_8201_9517 402
19 3300044684 Ga0466966_0000045 Ga0466966_0000045_23668_24984 402
20 3300044765 Ga0466970_0024880 Ga0466970_0024880_1298_2614 402
21 3300045049 Ga0466959_0000023 Ga0466959_0000023_29801_31117 402
22 3300053090 Ga0500646_0003489 Ga0500646_0003489_2134_3477 404
23 3300003322 rootL2_10093632 rootL2_100936321 405
24 3300003316 rootH1_10017121 rootH1_100171214 406
25 3300031456 Ga0307513_10098152 Ga0307513_100981522 406
26 3300003316 rootH1_10045200 rootH1_100452002 407
27 3300003322 rootL2_10343543 rootL2_103435432 408
28 3300053134 Ga0500658_0034191 Ga0500658_0034191_317_1612 408
29 3300053142 Ga0500577_0006207 Ga0500577_0006207_1536_2831 408
30 3300053153 Ga0500616_0031167 Ga0500616_0031167_576_1871 408
31 3300009553 Ga0105249_10179794 Ga0105249_101797942 409
32 3300009147 Ga0114129_10032770 Ga0114129_100327702 411
33 3300042015 Ga0439462_0011534 Ga0439462_0011534_899_2155 411
34 3300050507 nmdc:mga05p37_24825_c1 nmdc:mga05p37_24825_c1_5024_6340 411
35 3300010375 Ga0105239_10090795 Ga0105239_100907952 412
36 3300053088 Ga0500644_0000041 Ga0500644_0000041_48235_49512 413
37 3300003323 rootH1_10168945 rootH1_101689452 415
38 3300035695 Ga0373927_0024633 Ga0373927_0024633_1751_3028 415
39 3300049758 Ga0501241_000394 Ga0501241_000394_7406_8707 415
40 3300053092 Ga0500583_0000613 Ga0500583_0000613_8525_9868 416
41 3300005334 Ga0068869_100006469 Ga0068869_1000064694 417
42 3300005335 Ga0070666_10015339 Ga0070666_100153394 417
43 3300005338 Ga0068868_100015402 Ga0068868_1000154026 417
44 3300005344 Ga0070661_100212292 Ga0070661_1002122921 417
45 3300005364 Ga0070673_100009307 Ga0070673_1000093073 417
46 3300005456 Ga0070678_100023797 Ga0070678_1000237973 417
47 3300005459 Ga0068867_100011567 Ga0068867_1000115674 417
48 3300005539 Ga0068853_100092345 Ga0068853_1000923452 417
49 3300005543 Ga0070672_100142702 Ga0070672_1001427022 417
50 3300005548 Ga0070665_100069100 Ga0070665_1000691003 417
51 3300005578 Ga0068854_100034709 Ga0068854_1000347093 417
52 3300005617 Ga0068859_100029464 Ga0068859_1000294643 417
53 3300005718 Ga0068866_10045387 Ga0068866_100453871 417
54 3300005843 Ga0068860_100028672 Ga0068860_1000286722 417
55 3300006237 Ga0097621_100006627 Ga0097621_1000066273 417
56 3300006881 Ga0068865_100031260 Ga0068865_1000312604 417
57 3300006931 Ga0097620_100029464 Ga0097620_1000294643 417
58 3300009553 Ga0105249_10059853 Ga0105249_100598533 417
59 3300025901 Ga0207688_10019125 Ga0207688_100191253 417
60 3300025903 Ga0207680_10009356 Ga0207680_100093564 417
61 3300025907 Ga0207645_10008536 Ga0207645_100085364 417
62 3300025926 Ga0207659_10061092 Ga0207659_100610922 417
63 3300025934 Ga0207686_10040801 Ga0207686_100408013 417
64 3300025937 Ga0207669_10011860 Ga0207669_100118604 417
65 3300025938 Ga0207704_10022304 Ga0207704_100223041 417
66 3300025940 Ga0207691_10031063 Ga0207691_100310634 417
67 3300025942 Ga0207689_10002238 Ga0207689_100022385 417
68 3300025981 Ga0207640_10042942 Ga0207640_100429422 417
69 3300026089 Ga0207648_10010826 Ga0207648_100108264 417
70 3300026118 Ga0207675_100074162 Ga0207675_1000741623 417
71 3300026121 Ga0207683_10124649 Ga0207683_101246492 417
72 3300028381 Ga0268264_10011823 Ga0268264_100118233 417
73 3300048924 Ga0496121_0000020 Ga0496121_0000020_120985_122253 417
74 3300053086 Ga0500578_0000155 Ga0500578_0000155_27245_28591 417
75 iso_pu_bacteria 2883068021 2883070995 418
76 iso_pu_bacteria 2929239360 2929241563 418
77 3300025246 Ga0209646_1002293 Ga0209646_10022932 419
78 3300044658 Ga0466972_0000013 Ga0466972_0000013_131767_133119 419
79 3300044842 Ga0466957_0018079 Ga0466957_0018079_1348_2628 419
80 3300053086 Ga0500578_0021956 Ga0500578_0021956_1770_3125 419
81 3300041512 Ga0451853_0599642 Ga0451853_0599642_444_1769 420
82 3300003322 rootL2_10041268 rootL2_100412682 421
83 3300003322 rootL2_10005705 rootL2_1000570512 422
84 3300003322 rootL2_10022189 rootL2_100221892 422
85 3300003762 Ga0055542_1004502 Ga0055542_10045022 422
86 3300025242 Ga0209258_100247 Ga0209258_10024767 422
87 3300025254 Ga0209148_1000207 Ga0209148_100020770 422
88 3300046453 Ga0495627_008410 Ga0495627_008410_1531_2808 422
89 3300046558 Ga0495633_0000005 Ga0495633_0000005_345995_347272 422
90 3300048929 Ga0496126_0006136 Ga0496126_0006136_3170_4450 422
91 3300053092 Ga0500583_0010951 Ga0500583_0010951_1536_2846 422
92 3300053121 Ga0500607_046687 Ga0500607_046687_890_2200 422
93 3300053134 Ga0500658_0000923 Ga0500658_0000923_7108_8418 422
94 3300053142 Ga0500577_0001805 Ga0500577_0001805_265_1575 422
95 3300053148 Ga0500590_061396 Ga0500590_061396_114_1424 422
96 3300053153 Ga0500616_0015652 Ga0500616_0015652_1862_3172 422
97 3300053156 Ga0500622_0000042 Ga0500622_0000042_125065_126345 422
98 iso_pu_bacteria 2929154850 2929156197 422
99 3300003794 Ga0055531_10000153 Ga0055531_1000015310 423
100 3300025304 Ga0209257_1000001 Ga0209257_10000011074 423
101 3300049581 Ga0501047_0031126 Ga0501047_0031126_1245_2567 423
102 3300049758 Ga0501241_000073 Ga0501241_000073_7850_9133 423
103 3300031456 Ga0307513_10180363 Ga0307513_101803631 424
104 3300006195 Ga0075366_10021793 Ga0075366_100217932 425
105 3300049822 Ga0501035_0210009 Ga0501035_0210009_180_1463 426
106 3300049823 Ga0501044_0306013 Ga0501044_0306013_138_1421 426
107 iso_pu_bacteria 2738541278 2738726320 426
108 iso_pu_bacteria 2818991442 2819573469 426
109 iso_pu_bacteria 2818991444 2819589607 426
110 iso_pu_bacteria 2929239360 2929241098 426
111 3300005843 Ga0068860_100004989 Ga0068860_1000049894 427
112 3300005844 Ga0068862_100002828 Ga0068862_10000282812 427
113 3300010375 Ga0105239_10005014 Ga0105239_1000501410 427
114 3300014325 Ga0163163_10257941 Ga0163163_102579412 427
115 3300025942 Ga0207689_10091648 Ga0207689_100916482 427
116 3300025961 Ga0207712_10109124 Ga0207712_101091242 427
117 3300028380 Ga0268265_10023345 Ga0268265_100233454 427
118 3300044842 Ga0466957_0000156 Ga0466957_0000156_688_2001 427
119 3300053088 Ga0500644_0000247 Ga0500644_0000247_7018_8313 427
120 3300053092 Ga0500583_0000043 Ga0500583_0000043_45202_46515 427
121 3300053092 Ga0500583_0040706 Ga0500583_0040706_83_1378 427
122 3300053136 Ga0500559_0012684 Ga0500559_0012684_216_1511 427
123 3300003354 JGI25160J50197_1006053 JGI25160J50197_10060534 429
124 3300015265 Ga0182005_1002277 Ga0182005_10022772 429
125 3300025302 Ga0207426_1000363 Ga0207426_100036350 429
126 3300049581 Ga0501047_0047299 Ga0501047_0047299_1112_2443 429
127 3300050493 nmdc:mga0k408_130454_c1 nmdc:mga0k408_130454_c1_86_1405 429
128 3300055283 Ga0500661_007089 Ga0500661_007089_426_1766 429
129 3300003322 rootL2_10041267 rootL2_100412671 430
130 3300003323 rootH1_10010378 rootH1_100103786 430
131 3300010375 Ga0105239_10396038 Ga0105239_103960382 430
132 3300042014 Ga0439457_016075 Ga0439457_016075_250_1578 430
133 3300049581 Ga0501047_0189435 Ga0501047_0189435_263_1597 430
134 3300053139 Ga0500568_0048172 Ga0500568_0048172_201_1514 430
135 3300003794 Ga0055531_10000045 Ga0055531_1000004552 431
136 3300025304 Ga0209257_1000001 Ga0209257_10000011540 431
137 3300048929 Ga0496126_0032622 Ga0496126_0032622_2997_4340 431
138 3300049571 Ga0501034_0019432 Ga0501034_0019432_1165_2487 431
139 3300049571 Ga0501034_0274357 Ga0501034_0274357_195_1499 431
140 3300003320 rootH2_10068412 rootH2_100684122 432
141 3300053156 Ga0500622_0000484 Ga0500622_0000484_6568_7941 432
142 3300003320 rootH2_10086271 rootH2_100862712 433
143 3300003322 rootL2_10156994 rootL2_101569941 433
144 3300003323 rootH1_10038409 rootH1_100384095 433
145 3300005563 Ga0068855_100098620 Ga0068855_1000986201 433
146 3300005577 Ga0068857_100059881 Ga0068857_1000598813 433
147 3300005614 Ga0068856_100022385 Ga0068856_1000223852 433
148 3300025949 Ga0207667_10033219 Ga0207667_100332194 433
149 3300026116 Ga0207674_10054093 Ga0207674_100540932 433
150 3300031507 Ga0307509_10015282 Ga0307509_100152824 433
151 3300049581 Ga0501047_0024238 Ga0501047_0024238_2606_3928 433
152 3300050493 nmdc:mga0k408_31773_c1 nmdc:mga0k408_31773_c1_1595_2920 433
153 3300053092 Ga0500583_0000005 Ga0500583_0000005_53650_54972 433
154 iso_pu_bacteria 2840677318 2840679416 433
155 iso_pu_bacteria 2896085136 2896087227 433
156 iso_pu_bacteria 2896109856 2896113842 433
157 iso_pu_bacteria 2929921140 2929925491 433
158 iso_pu_bacteria 8003151029 8003155912 433
159 3300009545 Ga0105237_10012000 Ga0105237_100120002 434
160 3300010375 Ga0105239_10001680 Ga0105239_100016807 434
161 3300042014 Ga0439457_003145 Ga0439457_003145_932_2308 434
162 3300049705 Ga0501225_0000182 Ga0501225_0000182_4989_6320 434
163 3300050507 nmdc:mga05p37_1502_c2 nmdc:mga05p37_1502_c2_5705_7033 434
164 3300053088 Ga0500644_0007769 Ga0500644_0007769_593_1936 434
165 3300053092 Ga0500583_0015855 Ga0500583_0015855_447_1775 434
166 iso_pu_bacteria 2738541278 2738726962 434
167 3300005334 Ga0068869_100010853 Ga0068869_1000108534 435
168 3300005719 Ga0068861_100055839 Ga0068861_1000558393 435
169 3300005844 Ga0068862_100086785 Ga0068862_1000867853 435
170 3300025942 Ga0207689_10005906 Ga0207689_100059066 435
171 3300026118 Ga0207675_100003440 Ga0207675_1000034405 435
172 3300046471 Ga0495650_0009479 Ga0495650_0009479_3678_5006 435
173 3300046616 Ga0495668_0001443 Ga0495668_0001443_1161_2477 435
174 3300002738 JGI25154J39366_1000005 JGI25154J39366_1000005247 437
175 3300025246 Ga0209646_1000017 Ga0209646_1000017157 437
176 3300025250 Ga0209026_1000314 Ga0209026_100031410 437

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14135

DUF4302

Domain of unknown function (DUF4302)

39

277

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6xbw-assembly1.cif.gz_D cryo-em structure of v-atpase from bovine brain, state 1 0.6243 50 80
4u3q-assembly1.cif.gz_B crystal structure of recombinant tp0435 from treponema pallidum 0.6071 36 164
4u3q-assembly1.cif.gz_B crystal structure of recombinant tp0435 from treponema pallidum 0.5976 36 164
2la7-assembly1.cif.gz_A nmr structure of the protein yp_557733.1 from burkholderia xenovorans 0.5873 280 436
5cyb-assembly1.cif.gz_A-2 structure of a lipocalin lipoprotein affecting virulence in streptococcus pneumoniae 0.5755 190 280
ID Description Score Start End Superfamily
af_Q19910_105_449_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.6977 138 165 3.50.50.60
4ajuA02 Mainly Beta;Roll;Alpha-1-antitrypsin; domain 1;Alpha-1-antitrypsin, domain 1 0.6514 193 231 2.30.39.10
af_Q5SPJ4_231_325_3.30.497.10 Alpha Beta;2-Layer Sandwich;Antithrombin; Chain I, domain 2;Antithrombin, subunit I, domain 2 0.6464 194 229 3.30.497.10
af_A1A5V9_1_212_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.5985 203 243 3.40.50.300
2la7A01 Mainly Beta;Beta Barrel;Lipocalin; 0.5974 300 436 2.40.128.270
ID Description Score Start End GO Terms
AF-A0A512RE94-F1-model_v4 DUF4302 domain-containing protein 0.8918 1 437
AF-A0A512RE94-F1-model_v4 DUF4302 domain-containing protein 0.8899 1 437
AF-A0A172U3Q4-F1-model_v4 DUF4302 domain-containing protein 0.868 1 437
AF-A0A172U3Q4-F1-model_v4 DUF4302 domain-containing protein 0.8662 1 437
AF-A0A4Q3RSS5-F1-model_v4 DUF4302 domain-containing protein 0.8565 18 437

Feature Viewer

pLDDT pTM Quality
91.76 0.84 High
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Predicted Structure (AlphaFold2)

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