F268003

General Info

Members Datasets Scaffolds Average Seq Length
176 147 352 279

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10217905|Ga0081455_102179052
Length 293
Sequence MDFFARARYRWLMRIAVTIFLTDETVAPVRLARELEQRGFAGLYLPEHTHIPVERTTPYPAGGELPPEYGRTLDPFVALGQAAAVTERLGLGTGITLVAQHDPIALAKQIATLDHLSGGRFTLGLGFGWNVEEAADHGVEWRTRRELVRDRMALMRALWSEEPTAYEGEFGSVRASHAHPKPAQKPRGPVVGPRTFVGGAAGPKLFSHICAYADGWMPIGGRGLTESLPVLRSAWADAGRDPDALQIVPYAVYPSPGKLAHYADLGIEEVVVQLPPAGEAEVLRVLDDYAGHL

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
8 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
9 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
10 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
11 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
12 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
13 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
14 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
15 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
16 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
17 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
18 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
19 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
24 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
25 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
26 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
27 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
28 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
29 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
30 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
31 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
32 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
33 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
34 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
35 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
36 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
37 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
38 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
39 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
40 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
41 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
42 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
43 3300042128 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 Metagenome Rhizosphere
44 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
45 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
46 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
47 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
48 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
49 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
50 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
51 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
52 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
53 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
54 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
55 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
56 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
57 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
58 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
59 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
60 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
61 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
62 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
63 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
64 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
65 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
66 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
67 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
68 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
69 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
70 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
71 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
72 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
80 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
81 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
82 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
83 2643221548 Streptomyces sp. Root55 Isolate Unclassified
84 2643221578 Streptomyces sp. Root63 Isolate Unclassified
85 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
86 2643221647 Streptomyces sp. Root369 Isolate Unclassified
87 2643221670 Streptomyces sp. Root431 Isolate Unclassified
88 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
89 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
90 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
91 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
92 2643221714 Streptomyces sp. Root264 Isolate Unclassified
93 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
94 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
95 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
96 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
97 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
98 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
99 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
100 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
101 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
102 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
103 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
104 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
105 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
106 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
107 2862574272 Streptomyces sp. AcE210 Isolate Nodule
108 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
109 2867428634 Streptomyces sp. RP5T Isolate Unclassified
110 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
111 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
112 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
113 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
114 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
115 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
116 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
117 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
118 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
119 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
120 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
121 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
122 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
123 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
124 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
125 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
126 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
127 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
128 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
129 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
130 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
131 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
132 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
133 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
134 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
135 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
136 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
137 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
138 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
139 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
140 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
141 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
142 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
143 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
144 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
145 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
146 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
147 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 60.8
Metatranscriptomes 1.14
Isolates 38.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.11
Nodule 1.7
Rhizoplane 0.57
Rhizosphere 65.34
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10217905 3300005937 Bacteria 1417
2 rootH1_10014849 3300003316 Bacteria 9825
3 rootH2_10001312 3300003320 Bacteria 8619
4 rootL2_10012592 3300003322 Bacteria 2082
5 rootL2_10107591 3300003322 Bacteria 1775
6 rootH1_10008099 3300003323 Bacteria 3780
7 JGI25160J50197_1005142 3300003354 Bacteria 5501
8 JGI25160J50197_1005995 3300003354 Bacteria 4980
9 JGI25160J50197_1013057 3300003354 Bacteria 2850
10 Ga0006562J51391_1108137 3300003578 Bacteria 8890
11 Ga0006562J51391_1108139 3300003578 Bacteria 6440
12 Ga0075363_100015257 3300006048 Bacteria 3774
13 Ga0075367_10027260 3300006178 Bacteria 3249
14 Ga0105244_10027293 3300009036 Bacteria 3078
15 Ga0105245_10340021 3300009098 Bacteria 1484
16 Ga0105243_10036152 3300009148 Bacteria 3832
17 Ga0105246_10000530 3300011119 Bacteria 20842
18 Ga0182008_10001318 3300014497 Bacteria 16906
19 Ga0182007_10000435 3300015262 Bacteria 25447
20 Ga0182005_1020888 3300015265 Bacteria 1798
21 Ga0183367_1005 3300015688 Bacteria 652063
22 Ga0207426_1002250 3300025302 Bacteria 12808
23 Ga0207426_1002352 3300025302 Bacteria 12330
24 Ga0207426_1011482 3300025302 Bacteria 3370
25 Ga0207647_10024518 3300025904 Bacteria 3977
26 Ga0207709_10017161 3300025935 Bacteria 4036
27 Ga0207639_10040387 3300026041 Bacteria 3482
28 Ga0207702_10029771 3300026078 Bacteria 4545
29 Ga0307515_10035013 3300028794 Bacteria 8188
30 Ga0307512_10002337 3300030522 Bacteria 24365
31 Ga0307512_10030137 3300030522 Bacteria 4727
32 Ga0307508_10003868 3300031616 Bacteria 14900
33 Ga0307508_10225834 3300031616 Bacteria 1471
34 Ga0307508_10234794 3300031616 Bacteria 1431
35 Ga0307514_10027817 3300031649 Bacteria 4566
36 Ga0307516_10021516 3300031730 Bacteria 6632
37 Ga0307516_10061040 3300031730 Bacteria 3660
38 Ga0307507_10093229 3300033179 Bacteria 2566
39 Ga0307510_10044213 3300033180 Bacteria 4828
40 Ga0395900_0115449 3300037418 Bacteria 2755
41 Ga0395898_0079850 3300037466 Bacteria 3155
42 Ga0395901_0016337 3300038443 Bacteria 7559
43 Ga0395901_0294658 3300038443 Bacteria 1683
44 Ga0439436_0005078 3300041404 Bacteria 4030
45 Ga0439436_0006600 3300041404 Bacteria 3564
46 Ga0439439_0000302 3300041406 Bacteria 7893
47 Ga0439439_0000721 3300041406 Bacteria 5915
48 Ga0451802_2032800 3300041460 Bacteria 1360
49 Ga0451837_0150450 3300041494 Bacteria 2631
50 Ga0451853_0318911 3300041512 Bacteria 2238
51 Ga0451853_3309032 3300041512 Bacteria 4744
52 Ga0451853_3446550 3300041512 Bacteria 3177
53 Ga0439433_0008706 3300041999 Bacteria 2204
54 Ga0439448_0000327 3300042005 Bacteria 10559
55 Ga0439449_0000811 3300042007 Bacteria 12044
56 Ga0439449_0042905 3300042007 Bacteria 1680
57 Ga0439455_0001257 3300042012 Bacteria 4159
58 Ga0439457_000924 3300042014 Bacteria 8839
59 Ga0439457_005069 3300042014 Bacteria 3357
60 Ga0450897_008282 3300042128 Bacteria 964
61 Ga0450894_000012 3300042131 Bacteria 25903
62 Ga0450896_001377 3300042133 Bacteria 2973
63 Ga0450898_000751 3300042134 Bacteria 3976
64 Ga0450903_000219 3300042138 Bacteria 12756
65 Ga0450906_001606 3300042145 Bacteria 4952
66 Ga0439458_0000370 3300042157 Bacteria 11322
67 Ga0466970_0017262 3300044765 Bacteria 3728
68 Ga0466967_0037821 3300045976 Bacteria 4134
69 Ga0495592_0034703 3300046454 Bacteria 3801
70 Ga0495603_0006791 3300046455 Bacteria 6864
71 Ga0495629_0001100 3300046459 Bacteria 21396
72 Ga0495629_0004873 3300046459 Bacteria 10071
73 Ga0495629_0076234 3300046459 Bacteria 2341
74 Ga0495629_0227041 3300046459 Bacteria 1287
75 Ga0495585_0119122 3300046492 Bacteria 1398
76 Ga0495594_0001589 3300046499 Bacteria 11815
77 Ga0495594_0015049 3300046499 Bacteria 4060
78 Ga0495607_0123359 3300046501 Bacteria 1357
79 Ga0495620_0070239 3300046515 Bacteria 1435
80 Ga0495652_0016617 3300046529 Bacteria 6579
81 Ga0495668_0250802 3300046616 Bacteria 969
82 Ga0495634_0026863 3300046642 Bacteria 4013
83 Ga0495625_0039544 3300046660 Bacteria 3443
84 Ga0495625_0075919 3300046660 Bacteria 2351
85 Ga0495657_0107924 3300046675 Bacteria 1766
86 Ga0495613_0001413 3300046689 Bacteria 18297
87 Ga0495613_0007041 3300046689 Bacteria 8370
88 Ga0495589_0079838 3300046794 Bacteria 1591
89 Ga0495589_0094192 3300046794 Bacteria 1453
90 Ga0495600_0081324 3300046809 Bacteria 2114
91 Ga0495636_0032384 3300047318 Bacteria 2145
92 Ga0495636_0151183 3300047318 Bacteria 1042
93 Ga0495676_0000861 3300047321 Bacteria 25354
94 Ga0495676_0056051 3300047321 Bacteria 3119
95 Ga0495676_0079657 3300047321 Bacteria 2489
96 Ga0495675_0073494 3300047444 Bacteria 2156
97 Ga0495685_010506 3300047447 Bacteria 3106
98 Ga0495686_0090258 3300047472 Bacteria 1861
99 Ga0501032_0094342 3300049569 Bacteria 1984
100 Ga0501034_0024378 3300049571 Bacteria 6153
101 Ga0501036_0125765 3300049572 Bacteria 2165
102 Ga0501043_0325818 3300049579 Bacteria 1170
103 Ga0501047_0202036 3300049581 Bacteria 1848
104 Ga0501048_0476767 3300049582 Bacteria 894
105 Ga0501035_0363815 3300049822 Bacteria 1208
106 Ga0501044_0002881 3300049823 Bacteria 19577
107 Ga0501044_0041075 3300049823 Bacteria 4815
108 Ga0501044_0211102 3300049823 Bacteria 1895
109 Ga0500641_0118086 3300053096 Bacteria 1143
110 2585308571 2582581313 Bacteria 10042643
111 2616904799 2616644941 Bacteria 8510691
112 2643765773 2643221548 Bacteria 8053412
113 2643898427 2643221578 Bacteria 9213798
114 2643943495 2643221587 Bacteria 7586415
115 2644262194 2643221647 Bacteria 10741251
116 2644388670 2643221670 Bacteria 6497041
117 2644403702 2643221673 Bacteria 9196637
118 2644429854 2643221677 Bacteria 7584031
119 2644437090 2643221678 Bacteria 9540101
120 2644459884 2643221682 Bacteria 6743283
121 2644628835 2643221714 Bacteria 9015452
122 2785343406 2784746763 Bacteria 9783172
123 2785369421 2784746768 Bacteria 10036182
124 2786670530 2786546132 Bacteria 10419719
125 2808841982 2808606359 Bacteria 9866990
126 2808920512 2808606375 Bacteria 9466072
127 2811848950 2808606982 Bacteria 7791042
128 2812358180 2811994879 Bacteria 9313447
129 2812480560 2811994917 Bacteria 7761064
130 2819698015 2818991463 Bacteria 7948711
131 2852636748 2852635781 Bacteria 8251373
132 2862181899 2862178590 Bacteria 8583590
133 2862285577 2862281513 Bacteria 9621493
134 2862383794 2862382967 Bacteria 10317375
135 2862513962 2862507626 Bacteria 9425308
136 2862579320 2862574272 Bacteria 10567477
137 2863404702 2863404153 Bacteria 9672205
138 2867430325 2867428634 Bacteria 9590268
139 2873155793 2873151551 Bacteria 8625867
140 2875394503 2875391855 Bacteria 7600475
141 2877681185 2877676314 Bacteria 9512378
142 2912720058 2912715099 Bacteria 9460473
143 2912724383 2912723979 Bacteria 8557534
144 2912760740 2912757875 Bacteria 7940295
145 2918504443 2918501144 Bacteria 8668083
146 2919469583 2919468124 Bacteria 9133025
147 2935392458 2935390628 Bacteria 7043367
148 2946050109 2946045630 Bacteria 8527308
149 2946067667 2946064051 Bacteria 8957905
150 2946075851 2946072368 Bacteria 8999607
151 2954007542 2954002825 Bacteria 9173742
152 2954386323 2954380949 Bacteria 10050426
153 2954676851 2954673503 Bacteria 9685905
154 2954687307 2954682443 Bacteria 9862841
155 2954697003 2954691527 Bacteria 10720516
156 2954705130 2954701450 Bacteria 10834262
157 2954716316 2954711539 Bacteria 10867210
158 2954726261 2954721474 Bacteria 10456478
159 2954735551 2954731030 Bacteria 10243860
160 2954745185 2954740390 Bacteria 10229294
161 2954754406 2954749733 Bacteria 10366972
162 2954764159 2954759201 Bacteria 9358192
163 2966602628 2966598605 Bacteria 7676064
164 2990060356 2990059506 Bacteria 9321252
165 2997458348 2997451912 Bacteria 8492419
166 2997601468 2997600082 Bacteria 9896405
167 8008567400 8008558824 Bacteria 10610750
168 8008578930 8008574985 Bacteria 7815457
169 8025485950 8025478263 Bacteria 8209203
170 8025534640 8025530807 Bacteria 8495698
171 8048412830 8048406513 Bacteria 8936924
172 8054165998 8054160619 Bacteria 7783213
173 8056213177 8056207758 Bacteria 8639239
174 8056450363 8056447290 Bacteria 7680491
175 8056668432 8056667051 Bacteria 6953971
176 8056831773 8056829672 Bacteria 9045328
177 Ga0081455_10217905
178 rootH1_10014849
179 rootH2_10001312
180 rootL2_10012592
181 rootL2_10107591
182 rootH1_10008099
183 JGI25160J50197_1005142
184 JGI25160J50197_1005995
185 JGI25160J50197_1013057
186 Ga0006562J51391_1108137
187 Ga0006562J51391_1108139
188 Ga0075363_100015257
189 Ga0075367_10027260
190 Ga0105244_10027293
191 Ga0105245_10340021
192 Ga0105243_10036152
193 Ga0105246_10000530
194 Ga0182008_10001318
195 Ga0182007_10000435
196 Ga0182005_1020888
197 Ga0183367_1005
198 Ga0207426_1002250
199 Ga0207426_1002352
200 Ga0207426_1011482
201 Ga0207647_10024518
202 Ga0207709_10017161
203 Ga0207639_10040387
204 Ga0207702_10029771
205 Ga0307515_10035013
206 Ga0307512_10002337
207 Ga0307512_10030137
208 Ga0307508_10003868
209 Ga0307508_10225834
210 Ga0307508_10234794
211 Ga0307514_10027817
212 Ga0307516_10021516
213 Ga0307516_10061040
214 Ga0307507_10093229
215 Ga0307510_10044213
216 Ga0395900_0115449
217 Ga0395898_0079850
218 Ga0395901_0016337
219 Ga0395901_0294658
220 Ga0439436_0005078
221 Ga0439436_0006600
222 Ga0439439_0000302
223 Ga0439439_0000721
224 Ga0451802_2032800
225 Ga0451837_0150450
226 Ga0451853_0318911
227 Ga0451853_3309032
228 Ga0451853_3446550
229 Ga0439433_0008706
230 Ga0439448_0000327
231 Ga0439449_0000811
232 Ga0439449_0042905
233 Ga0439455_0001257
234 Ga0439457_000924
235 Ga0439457_005069
236 Ga0450897_008282
237 Ga0450894_000012
238 Ga0450896_001377
239 Ga0450898_000751
240 Ga0450903_000219
241 Ga0450906_001606
242 Ga0439458_0000370
243 Ga0466970_0017262
244 Ga0466967_0037821
245 Ga0495592_0034703
246 Ga0495603_0006791
247 Ga0495629_0001100
248 Ga0495629_0004873
249 Ga0495629_0076234
250 Ga0495629_0227041
251 Ga0495585_0119122
252 Ga0495594_0001589
253 Ga0495594_0015049
254 Ga0495607_0123359
255 Ga0495620_0070239
256 Ga0495652_0016617
257 Ga0495668_0250802
258 Ga0495634_0026863
259 Ga0495625_0039544
260 Ga0495625_0075919
261 Ga0495657_0107924
262 Ga0495613_0001413
263 Ga0495613_0007041
264 Ga0495589_0079838
265 Ga0495589_0094192
266 Ga0495600_0081324
267 Ga0495636_0032384
268 Ga0495636_0151183
269 Ga0495676_0000861
270 Ga0495676_0056051
271 Ga0495676_0079657
272 Ga0495675_0073494
273 Ga0495685_010506
274 Ga0495686_0090258
275 Ga0501032_0094342
276 Ga0501034_0024378
277 Ga0501036_0125765
278 Ga0501043_0325818
279 Ga0501047_0202036
280 Ga0501048_0476767
281 Ga0501035_0363815
282 Ga0501044_0002881
283 Ga0501044_0041075
284 Ga0501044_0211102
285 Ga0500641_0118086
286 2585308571
287 2616904799
288 2643765773
289 2643898427
290 2643943495
291 2644262194
292 2644388670
293 2644403702
294 2644429854
295 2644437090
296 2644459884
297 2644628835
298 2785343406
299 2785369421
300 2786670530
301 2808841982
302 2808920512
303 2811848950
304 2812358180
305 2812480560
306 2819698015
307 2852636748
308 2862181899
309 2862285577
310 2862383794
311 2862513962
312 2862579320
313 2863404702
314 2867430325
315 2873155793
316 2875394503
317 2877681185
318 2912720058
319 2912724383
320 2912760740
321 2918504443
322 2919469583
323 2935392458
324 2946050109
325 2946067667
326 2946075851
327 2954007542
328 2954386323
329 2954676851
330 2954687307
331 2954697003
332 2954705130
333 2954716316
334 2954726261
335 2954735551
336 2954745185
337 2954754406
338 2954764159
339 2966602628
340 2990060356
341 2997458348
342 2997601468
343 8008567400
344 8008578930
345 8025485950
346 8025534640
347 8048412830
348 8054165998
349 8056213177
350 8056450363
351 8056668432
352 8056831773

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00296

Bac_luciferase

Luciferase-like monooxygenase

23

257

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1z69-assembly1.cif.gz_B crystal structure of methylenetetrahydromethanopterin reductase (mer) in complex with coenzyme f420 0.8372 1 239
7bip-assembly1.cif.gz_B crystal structure of monooxygenase rslo1 from streptomyces bottropensis 0.7849 1 281
6ket-assembly1.cif.gz_B flavin-utilizing monooxygenase (ox) domain of hybrid polyketide/non-ribosomal peptide synthetase 0.7832 1 238
7bip-assembly1.cif.gz_B crystal structure of monooxygenase rslo1 from streptomyces bottropensis 0.7823 1 281
1rhc-assembly1.cif.gz_A-2 f420-dependent secondary alcohol dehydrogenase in complex with an f420-acetone adduct 0.7761 1 281
ID Description Score Start End Superfamily
af_O06216_16_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.97 16 281 3.20.20.30
af_O06216_16_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9663 16 281 3.20.20.30
af_I6XG43_1_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9331 1 281 3.20.20.30
af_P9WKN5_1_280_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9288 1 279 3.20.20.30
af_I6XG43_1_274_3.20.20.30 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Luciferase-like domain 0.9199 1 281 3.20.20.30
ID Description Score Start End GO Terms
AF-A0A7M3M9A4-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9833 1 281 GO:0016705
AF-A0A356K9I6-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9822 5 127 GO:0016705
AF-A0A7M3M9A4-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9799 1 281 GO:0016705
AF-A0A538HEW2-F1-model_v4 TIGR03619 family F420-dependent LLM class oxidoreductase (EC 1.-.-.-) 0.9786 2 280 GO:0016705
AF-A0A2V6RVL8-F1-model_v4 LLM class F420-dependent oxidoreductase 0.9766 1 141 GO:0016705

Map