F265420

General Info

Members Datasets Scaffolds Average Seq Length
174 114 348 171

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0185815|Ga0500616_0185815_54_629
Length 191
Sequence MLSGLKQRYLAVPLFRDATTPFLPVLRQWPIFAVLASAAMLAIAHSFETFGGLAPCNLCLKAREVYWVALCVGLVGVLMQRFTWATRTRLVVLWLLAFTFLIGAGLGAFHAGVEWKWWPGPTTCTGGSGVTAADITAMLGGAKVKPPACDKAAWVFLGLSMAGWNALISLGLAKLSFMAAIRATIRQGAGQ

Samples

Sample ID Description Type Environment
1 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
39 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
76 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
77 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
85 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
89 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
94 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
100 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
101 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
102 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
103 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
104 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
105 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
106 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
107 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
108 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
109 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
110 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
111 2849560528 Caulobacter zeae 410 Isolate Unclassified
112 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
113 2851153111 Caulobacter radicis 736 Isolate Unclassified
114 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.83
Metatranscriptomes 0
Isolates 5.17

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.9
Nodule 0
Rhizoplane 2.87
Rhizosphere 84.48
Stem 0
Stem Tuber 0
Unclassified 1.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500616_0185815 3300053153 Bacteria 932
2 Ga0070658_10032109 3300005327 Bacteria 4221
3 Ga0070658_10084978 3300005327 Bacteria 2602
4 Ga0070658_10243498 3300005327 Bacteria 1524
5 Ga0070658_10744370 3300005327 Bacteria 851
6 Ga0070658_11222788 3300005327 Bacteria 653
7 Ga0070666_10041001 3300005335 Bacteria 3092
8 Ga0070680_100011718 3300005336 Bacteria 6796
9 Ga0070680_100425047 3300005336 Bacteria 1134
10 Ga0068868_100166347 3300005338 Bacteria 1824
11 Ga0070660_100031145 3300005339 Bacteria 4004
12 Ga0070660_100090241 3300005339 Bacteria 2416
13 Ga0070660_100338471 3300005339 Bacteria 1238
14 Ga0070668_100003642 3300005347 Bacteria 11366
15 Ga0070659_100001624 3300005366 Bacteria 16179
16 Ga0070659_100048659 3300005366 Bacteria 3331
17 Ga0070681_10004856 3300005458 Bacteria 12893
18 Ga0070681_10354439 3300005458 Bacteria 1377
19 Ga0070679_100002478 3300005530 Bacteria 16719
20 Ga0070679_100117418 3300005530 Bacteria 2645
21 Ga0068853_100044752 3300005539 Bacteria 3789
22 Ga0068853_100053524 3300005539 Bacteria 3476
23 Ga0068853_100679827 3300005539 Bacteria 981
24 Ga0070665_100000657 3300005548 Bacteria 46640
25 Ga0068855_100042316 3300005563 Bacteria 5397
26 Ga0068855_101860942 3300005563 Bacteria 610
27 Ga0068857_100263896 3300005577 Bacteria 1581
28 Ga0068856_100407362 3300005614 Bacteria 1379
29 Ga0068856_101128172 3300005614 Unclassified 801
30 Ga0068856_101518433 3300005614 Bacteria 684
31 Ga0068852_100241338 3300005616 Bacteria 1727
32 Ga0068864_100037823 3300005618 Bacteria 4120
33 Ga0068864_100439692 3300005618 Bacteria 1246
34 Ga0068864_100709608 3300005618 Bacteria 983
35 Ga0068870_10370440 3300005840 Bacteria 924
36 Ga0068863_100109217 3300005841 Bacteria 2633
37 Ga0068863_101377248 3300005841 Bacteria 713
38 Ga0068858_100850435 3300005842 Bacteria 891
39 Ga0068860_100000037 3300005843 Bacteria 234524
40 Ga0068862_100020617 3300005844 Bacteria 5507
41 Ga0068862_100039994 3300005844 Bacteria 3984
42 Ga0068862_100823073 3300005844 Bacteria 908
43 Ga0068862_101109392 3300005844 Bacteria 786
44 Ga0070717_10028219 3300006028 Bacteria 4490
45 Ga0075366_10065456 3300006195 Bacteria 2162
46 Ga0075370_10248855 3300006353 Bacteria 1053
47 Ga0068871_100471447 3300006358 Bacteria 1128
48 Ga0068865_100000361 3300006881 Bacteria 25141
49 Ga0068865_101328730 3300006881 Bacteria 640
50 Ga0105240_10000854 3300009093 Bacteria 54945
51 Ga0105240_10009561 3300009093 Bacteria 13726
52 Ga0105240_10024652 3300009093 Bacteria 7925
53 Ga0105240_10062630 3300009093 Bacteria 4630
54 Ga0105240_10108421 3300009093 Bacteria 3365
55 Ga0105240_10209639 3300009093 Bacteria 2278
56 Ga0105242_10589543 3300009176 Bacteria 1072
57 Ga0105248_10000782 3300009177 Bacteria 35721
58 Ga0105237_10091447 3300009545 Bacteria 3032
59 Ga0105238_10017599 3300009551 Bacteria 7265
60 Ga0105238_10140710 3300009551 Bacteria 2390
61 Ga0105238_10228535 3300009551 Bacteria 1837
62 Ga0105238_10483452 3300009551 Bacteria 1238
63 Ga0105249_10051717 3300009553 Bacteria 3749
64 Ga0157369_10900389 3300013105 Bacteria 907
65 Ga0163162_10192400 3300013306 Bacteria 2168
66 Ga0163163_10020363 3300014325 Bacteria 6246
67 Ga0213876_10057786 3300021384 Bacteria 2048
68 Ga0209233_1035758 3300025261 Bacteria 1118
69 Ga0209256_1008255 3300025299 Bacteria 4874
70 Ga0207643_10348198 3300025908 Bacteria 930
71 Ga0207705_10003911 3300025909 Bacteria 11328
72 Ga0207705_10152852 3300025909 Bacteria 1730
73 Ga0207705_10245273 3300025909 Bacteria 1365
74 Ga0207707_10156186 3300025912 Bacteria 1995
75 Ga0207707_10289994 3300025912 Bacteria 1416
76 Ga0207695_10009602 3300025913 Bacteria 11946
77 Ga0207695_10010547 3300025913 Bacteria 11299
78 Ga0207695_10010644 3300025913 Bacteria 11237
79 Ga0207695_10023204 3300025913 Bacteria 7019
80 Ga0207695_10135057 3300025913 Bacteria 2421
81 Ga0207671_10266771 3300025914 Bacteria 1348
82 Ga0207660_10006502 3300025917 Bacteria 7584
83 Ga0207657_10006220 3300025919 Bacteria 12407
84 Ga0207657_10025633 3300025919 Bacteria 5432
85 Ga0207649_10290745 3300025920 Bacteria 1191
86 Ga0207652_10049624 3300025921 Bacteria 3593
87 Ga0207652_10551037 3300025921 Bacteria 1036
88 Ga0207694_10068710 3300025924 Bacteria 2767
89 Ga0207694_10122539 3300025924 Bacteria 2077
90 Ga0207694_10217811 3300025924 Bacteria 1556
91 Ga0207694_10326625 3300025924 Bacteria 1267
92 Ga0207690_10000132 3300025932 Bacteria 60604
93 Ga0207690_10082674 3300025932 Bacteria 2246
94 Ga0207686_10253620 3300025934 Bacteria 1287
95 Ga0207704_10001616 3300025938 Bacteria 10136
96 Ga0207704_11083024 3300025938 Bacteria 680
97 Ga0207711_10000302 3300025941 Bacteria 52984
98 Ga0207667_10006235 3300025949 Bacteria 14473
99 Ga0207667_10072240 3300025949 Bacteria 3587
100 Ga0207667_10574649 3300025949 Bacteria 1138
101 Ga0207712_10263046 3300025961 Bacteria 1400
102 Ga0207668_10011776 3300025972 Bacteria 5329
103 Ga0207677_10331318 3300026023 Bacteria 1269
104 Ga0207703_10718900 3300026035 Bacteria 950
105 Ga0207639_10098952 3300026041 Bacteria 2352
106 Ga0207639_10133880 3300026041 Bacteria 2055
107 Ga0207678_10394751 3300026067 Bacteria 1197
108 Ga0207702_11082415 3300026078 Unclassified 795
109 Ga0207641_10714614 3300026088 Bacteria 987
110 Ga0207641_10756884 3300026088 Bacteria 959
111 Ga0207648_10680977 3300026089 Bacteria 952
112 Ga0207676_10062147 3300026095 Bacteria 2961
113 Ga0207676_10558160 3300026095 Bacteria 1095
114 Ga0207674_10399870 3300026116 Bacteria 1328
115 Ga0207698_10177863 3300026142 Bacteria 1881
116 Ga0207698_10249032 3300026142 Bacteria 1624
117 Ga0268266_10000003 3300028379 Bacteria 1701703
118 Ga0268265_10014843 3300028380 Bacteria 5317
119 Ga0268265_10813992 3300028380 Bacteria 911
120 Ga0268264_10000002 3300028381 Bacteria 1153045
121 Ga0265338_10094055 3300028800 Bacteria 2467
122 Ga0265327_10000140 3300031251 Bacteria 158935
123 Ga0265327_10140500 3300031251 Bacteria 1129
124 Ga0307410_10006353 3300031852 Bacteria 6372
125 Ga0307407_10420297 3300031903 Bacteria 963
126 Ga0307409_100054716 3300031995 Bacteria 3076
127 Ga0307411_10075123 3300032005 Bacteria 2306
128 Ga0373936_0003587 3300035113 Bacteria 5836
129 Ga0373962_0006285 3300035242 Bacteria 2875
130 Ga0395899_0000307 3300037312 Bacteria 62610
131 Ga0395900_0000052 3300037418 Bacteria 223910
132 Ga0395898_0010310 3300037466 Bacteria 9778
133 Ga0395905_0004427 3300037471 Bacteria 14601
134 Ga0395901_0000001 3300038443 Bacteria 800383
135 Ga0436365_1235674 3300039437 Bacteria 4301
136 Ga0466966_0147863 3300044684 Bacteria 1434
137 Ga0495594_0614922 3300046499 Bacteria 616
138 Ga0495628_0519056 3300046516 Bacteria 858
139 Ga0495628_0616246 3300046516 Bacteria 774
140 Ga0495630_0670431 3300046517 Bacteria 794
141 Ga0495645_0035188 3300046543 Bacteria 3652
142 Ga0495668_0436865 3300046616 Bacteria 720
143 Ga0495600_0136689 3300046809 Bacteria 1592
144 Ga0495672_0002402 3300047320 Bacteria 17288
145 Ga0496112_0043099 3300048915 Bacteria 4417
146 Ga0496115_0000447 3300048918 Bacteria 33288
147 Ga0496115_0008083 3300048918 Bacteria 7770
148 Ga0496115_0238078 3300048918 Bacteria 1500
149 Ga0496115_0340070 3300048918 Bacteria 1225
150 Ga0496125_0093685 3300048928 Bacteria 2241
151 Ga0501033_0071114 3300049570 Bacteria 2556
152 Ga0501047_0130293 3300049581 Bacteria 2396
153 Ga0501047_0200199 3300049581 Bacteria 1858
154 Ga0501047_0571610 3300049581 Bacteria 954
155 Ga0501035_0581021 3300049822 Bacteria 915
156 Ga0501044_0004523 3300049823 Bacteria 15552
157 Ga0501044_0207352 3300049823 Bacteria 1916
158 nmdc:mga0k408_306893_c1 3300050493 Bacteria 947
159 Ga0495601_0307811 3300053077 Bacteria 1032
160 Ga0500646_0158226 3300053090 Unclassified 755
161 Ga0500557_080193 3300053105 Bacteria 1077
162 Ga0500559_0000001 3300053136 Bacteria 325464
163 Ga0500616_0106353 3300053153 Bacteria 1363
164 Ga0500639_151303 3300053163 Bacteria 1069
165 Ga0500636_0005421 3300053177 Bacteria 7282
166 2644086674 2643221614 Bacteria 4260023
167 2644341628 2643221661 Bacteria 4267604
168 2644367915 2643221666 Bacteria 4265935
169 2792461042 2791355048 Bacteria 5832535
170 2843749326 2843744320 Bacteria 5659202
171 2849562698 2849560528 Bacteria 5393480
172 2849576914 2849573788 Bacteria 5421256
173 2851156122 2851153111 Bacteria 5542585
174 2898333915 2898329390 Bacteria 5168154
175 Ga0500616_0185815
176 Ga0070658_10032109
177 Ga0070658_10084978
178 Ga0070658_10243498
179 Ga0070658_10744370
180 Ga0070658_11222788
181 Ga0070666_10041001
182 Ga0070680_100011718
183 Ga0070680_100425047
184 Ga0068868_100166347
185 Ga0070660_100031145
186 Ga0070660_100090241
187 Ga0070660_100338471
188 Ga0070668_100003642
189 Ga0070659_100001624
190 Ga0070659_100048659
191 Ga0070681_10004856
192 Ga0070681_10354439
193 Ga0070679_100002478
194 Ga0070679_100117418
195 Ga0068853_100044752
196 Ga0068853_100053524
197 Ga0068853_100679827
198 Ga0070665_100000657
199 Ga0068855_100042316
200 Ga0068855_101860942
201 Ga0068857_100263896
202 Ga0068856_100407362
203 Ga0068856_101128172
204 Ga0068856_101518433
205 Ga0068852_100241338
206 Ga0068864_100037823
207 Ga0068864_100439692
208 Ga0068864_100709608
209 Ga0068870_10370440
210 Ga0068863_100109217
211 Ga0068863_101377248
212 Ga0068858_100850435
213 Ga0068860_100000037
214 Ga0068862_100020617
215 Ga0068862_100039994
216 Ga0068862_100823073
217 Ga0068862_101109392
218 Ga0070717_10028219
219 Ga0075366_10065456
220 Ga0075370_10248855
221 Ga0068871_100471447
222 Ga0068865_100000361
223 Ga0068865_101328730
224 Ga0105240_10000854
225 Ga0105240_10009561
226 Ga0105240_10024652
227 Ga0105240_10062630
228 Ga0105240_10108421
229 Ga0105240_10209639
230 Ga0105242_10589543
231 Ga0105248_10000782
232 Ga0105237_10091447
233 Ga0105238_10017599
234 Ga0105238_10140710
235 Ga0105238_10228535
236 Ga0105238_10483452
237 Ga0105249_10051717
238 Ga0157369_10900389
239 Ga0163162_10192400
240 Ga0163163_10020363
241 Ga0213876_10057786
242 Ga0209233_1035758
243 Ga0209256_1008255
244 Ga0207643_10348198
245 Ga0207705_10003911
246 Ga0207705_10152852
247 Ga0207705_10245273
248 Ga0207707_10156186
249 Ga0207707_10289994
250 Ga0207695_10009602
251 Ga0207695_10010547
252 Ga0207695_10010644
253 Ga0207695_10023204
254 Ga0207695_10135057
255 Ga0207671_10266771
256 Ga0207660_10006502
257 Ga0207657_10006220
258 Ga0207657_10025633
259 Ga0207649_10290745
260 Ga0207652_10049624
261 Ga0207652_10551037
262 Ga0207694_10068710
263 Ga0207694_10122539
264 Ga0207694_10217811
265 Ga0207694_10326625
266 Ga0207690_10000132
267 Ga0207690_10082674
268 Ga0207686_10253620
269 Ga0207704_10001616
270 Ga0207704_11083024
271 Ga0207711_10000302
272 Ga0207667_10006235
273 Ga0207667_10072240
274 Ga0207667_10574649
275 Ga0207712_10263046
276 Ga0207668_10011776
277 Ga0207677_10331318
278 Ga0207703_10718900
279 Ga0207639_10098952
280 Ga0207639_10133880
281 Ga0207678_10394751
282 Ga0207702_11082415
283 Ga0207641_10714614
284 Ga0207641_10756884
285 Ga0207648_10680977
286 Ga0207676_10062147
287 Ga0207676_10558160
288 Ga0207674_10399870
289 Ga0207698_10177863
290 Ga0207698_10249032
291 Ga0268266_10000003
292 Ga0268265_10014843
293 Ga0268265_10813992
294 Ga0268264_10000002
295 Ga0265338_10094055
296 Ga0265327_10000140
297 Ga0265327_10140500
298 Ga0307410_10006353
299 Ga0307407_10420297
300 Ga0307409_100054716
301 Ga0307411_10075123
302 Ga0373936_0003587
303 Ga0373962_0006285
304 Ga0395899_0000307
305 Ga0395900_0000052
306 Ga0395898_0010310
307 Ga0395905_0004427
308 Ga0395901_0000001
309 Ga0436365_1235674
310 Ga0466966_0147863
311 Ga0495594_0614922
312 Ga0495628_0519056
313 Ga0495628_0616246
314 Ga0495630_0670431
315 Ga0495645_0035188
316 Ga0495668_0436865
317 Ga0495600_0136689
318 Ga0495672_0002402
319 Ga0496112_0043099
320 Ga0496115_0000447
321 Ga0496115_0008083
322 Ga0496115_0238078
323 Ga0496115_0340070
324 Ga0496125_0093685
325 Ga0501033_0071114
326 Ga0501047_0130293
327 Ga0501047_0200199
328 Ga0501047_0571610
329 Ga0501035_0581021
330 Ga0501044_0004523
331 Ga0501044_0207352
332 nmdc:mga0k408_306893_c1
333 Ga0495601_0307811
334 Ga0500646_0158226
335 Ga0500557_080193
336 Ga0500559_0000001
337 Ga0500616_0106353
338 Ga0500639_151303
339 Ga0500636_0005421
340 2644086674
341 2644341628
342 2644367915
343 2792461042
344 2843749326
345 2849562698
346 2849576914
347 2851156122
348 2898333915

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02600

DsbB

Disulfide bond formation protein DsbB

26

179

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2k74-assembly1.cif.gz_A solution nmr structure of dsbb-ubiquinone complex 0.6292 1 166
6wvf-assembly1.cif.gz_A e.coli dsbb c104s with ubiquinone 0.6225 10 166
6akg-assembly2.cif.gz_C crystal structure of mouse claudin-3 p134g mutant in complex with c-terminal fragment of clostridium perfringens enterotoxin 0.6099 41 161
2k74-assembly1.cif.gz_A solution nmr structure of dsbb-ubiquinone complex 0.604 1 166
8p3y-assembly1.cif.gz_H homomeric glua2 flip r/g-edited q/r-edited f231a mutant in tandem with tarp gamma-2, desensitized conformation 3 0.5837 41 166
ID Description Score Start End Superfamily
2zuqD00 Mainly Alpha;Up-down Bundle;Bromodomain-like;DsbB-like 0.6749 13 158 1.20.1550.10
2zuqA00 Mainly Alpha;Up-down Bundle;Bromodomain-like;DsbB-like 0.6498 10 158 1.20.1550.10
af_Q9VRD7_1_131_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.6458 1 170 1.20.1070.10
af_Q4DXG6_219_389_1.20.58.390 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Neurotransmitter-gated ion-channel transmembrane domain 0.6422 27 170 1.20.58.390
af_Q9VRD7_1_131_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.6418 1 170 1.20.1070.10
ID Description Score Start End GO Terms
AF-A0A0Q6TVY0-F1-model_v4 Disulfide bond formation protein DsbB 0.9635 3 165 GO:0006457
GO:0015035
GO:0016020
AF-A0A2G5QVX2-F1-model_v4 Disulfide bond formation protein B 0.9553 8 165 GO:0006457
GO:0015035
GO:0016020
AF-A0A0V2FCB9-F1-model_v4 deleted 0.9421 5 168
AF-A0A7G8ZGY1-F1-model_v4 Disulfide bond formation protein B 0.9208 3 165 GO:0005886
GO:0006457
GO:0015035
AF-A0A0Q6TVY0-F1-model_v4 Disulfide bond formation protein DsbB 0.9195 3 165 GO:0006457
GO:0015035
GO:0016020

Map