F264889

General Info

Members Datasets Scaffolds Average Seq Length
174 114 348 415

Family's Representative Sequence

Representative Sequence 3300035170|Ga0373943_0097277|Ga0373943_0097277_143_1513
Length 456
Sequence MNEQTQAVQRVIGFDSHPDSFTAALLRGPTPAAAIVEKIFNKVPMAQLQSWAKKHTTPEDLIVLESSGNSFQVVRELETVSRRGKVLESVQMGKLKEAHANNDKISAVRIGKAYLAGTAKEVWVPDARTQERRDWFHAYRKAVKRTSQVSNRLDSYLSDNGVRLPANTKEEIQKARVWTPRQWQVIEGLLKECEHADWQREHWSSLMAQEVLQDPELLSMVRLCGVRTIVAFAVGAFVGDIKRFASPKKLVKYVGLDPAFDDSGESEWSGGIGGHGRSDLRSLLIESAQAILRSSKTPLAHWGKKLLARKGAINLVVAAMARKLTIAIWYLLMGRWTPLEEIDERLEIKVSKMISQVGSKGLEQLKKNRKDFRQEIHQRLKAGRVYVLDPAKTFGAKPAGPNPVAPAMAAATSPEEPNHTFNKSQKASRVAGGELDQASAARTSSPPRSSPLQPCL

Samples

Sample ID Description Type Environment
1 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
15 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
16 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
19 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
23 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
24 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
25 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
32 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
33 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
38 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
39 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
40 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
41 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
42 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
43 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
44 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
45 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
46 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
47 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
48 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
49 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
50 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
51 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
52 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
53 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
54 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
55 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
56 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
57 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
58 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
59 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
60 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
61 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
62 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
67 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
71 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
72 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
73 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
74 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
75 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
76 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
79 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
80 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
84 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
85 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
86 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
87 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
88 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
89 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
90 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
91 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
94 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
95 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
96 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
97 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
98 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
101 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
102 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
103 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
104 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
108 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
113 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
114 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.57
Rhizosphere 98.28
Stem 0
Stem Tuber 0
Unclassified 45.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373943_0097277 3300035170 Unclassified 1533
2 rootL2_10187439 3300003322 Unclassified 1717
3 Ga0070683_100212105 3300005329 Unclassified 1839
4 Ga0070688_100163822 3300005365 Bacteria 1529
5 Ga0070705_100146638 3300005440 Bacteria 1560
6 Ga0070708_100134922 3300005445 Bacteria 2286
7 Ga0070708_100218451 3300005445 Unclassified 1787
8 Ga0070699_100212450 3300005518 Unclassified 1723
9 Ga0070686_100096560 3300005544 Bacteria 1988
10 Ga0068857_100132737 3300005577 Unclassified 2247
11 Ga0068856_100230113 3300005614 Bacteria 1869
12 Ga0068859_100160255 3300005617 Bacteria 2329
13 Ga0068859_100192021 3300005617 Unclassified 2126
14 Ga0068863_100134650 3300005841 Bacteria 2360
15 Ga0068863_100205499 3300005841 Unclassified 1895
16 Ga0097621_100059770 3300006237 Bacteria 3122
17 Ga0068871_100087960 3300006358 Bacteria 2584
18 Ga0075430_100173543 3300006846 Bacteria 1794
19 Ga0075434_100153001 3300006871 Bacteria 2327
20 Ga0097620_100160260 3300006931 Bacteria 2329
21 Ga0097620_100192020 3300006931 Unclassified 2126
22 Ga0075435_100177922 3300007076 Unclassified 1797
23 Ga0099794_10082123 3300007265 Bacteria 1591
24 Ga0111539_10115735 3300009094 Unclassified 3144
25 Ga0111539_10239882 3300009094 Unclassified 2110
26 Ga0105238_10087685 3300009551 Bacteria 3099
27 Ga0105238_10348490 3300009551 Bacteria 1470
28 Ga0157371_10131797 3300013102 Bacteria 1779
29 Ga0163163_10166651 3300014325 Bacteria 2249
30 Ga0163163_10231787 3300014325 Unclassified 1896
31 Ga0157380_10279469 3300014326 Unclassified 1527
32 Ga0207692_10058421 3300025898 Bacteria 1987
33 Ga0207694_10045883 3300025924 Bacteria 3377
34 Ga0207670_10001646 3300025936 Bacteria 11661
35 Ga0207641_10090385 3300026088 Unclassified 2677
36 Ga0207641_10142453 3300026088 Bacteria 2164
37 Ga0207676_10168726 3300026095 Unclassified 1904
38 Ga0207674_10093570 3300026116 Bacteria 2994
39 Ga0207674_10213668 3300026116 Bacteria 1878
40 Ga0265334_10035603 3300028573 Unclassified 1969
41 Ga0265334_10055446 3300028573 Bacteria 1508
42 Ga0265323_10045546 3300028653 Unclassified 1576
43 Ga0307517_10162534 3300028786 Unclassified 1494
44 Ga0265338_10202109 3300028800 Bacteria 1498
45 Ga0265338_10222635 3300028800 Unclassified 1408
46 Ga0265328_10042291 3300031239 Bacteria 1677
47 Ga0265320_10087066 3300031240 Bacteria 1451
48 Ga0265340_10062322 3300031247 Unclassified 1781
49 Ga0265327_10078982 3300031251 Bacteria 1629
50 Ga0265316_10108468 3300031344 Bacteria 2104
51 Ga0265316_10118850 3300031344 Unclassified 1997
52 Ga0265316_10129742 3300031344 Unclassified 1899
53 Ga0265316_10130455 3300031344 Unclassified 1893
54 Ga0265316_10143891 3300031344 Bacteria 1789
55 Ga0265316_10160579 3300031344 Unclassified 1680
56 Ga0316575_10041404 3300031665 Unclassified 1822
57 Ga0265314_10164541 3300031711 Bacteria 1346
58 Ga0265342_10088534 3300031712 Bacteria 1777
59 Ga0316576_10102289 3300031727 Unclassified 2142
60 Ga0316578_10056777 3300031728 Unclassified 2299
61 Ga0316577_10073394 3300031733 Unclassified 1910
62 Ga0316585_10029987 3300032137 Unclassified 1705
63 Ga0373926_0037827 3300035083 Unclassified 1717
64 Ga0373934_0033379 3300035086 Bacteria 2020
65 Ga0373923_0041481 3300035111 Unclassified 1897
66 Ga0373936_0038371 3300035113 Bacteria 1914
67 Ga0373939_0004806 3300035114 Bacteria 3202
68 Ga0373953_0046418 3300035117 Bacteria 1744
69 Ga0373954_0053414 3300035118 Unclassified 1899
70 Ga0373956_0049963 3300035119 Bacteria 1876
71 Ga0373956_0060301 3300035119 Unclassified 1717
72 Ga0373957_0039554 3300035120 Unclassified 1769
73 Ga0373957_0044879 3300035120 Bacteria 1673
74 Ga0373943_0080226 3300035170 Unclassified 1672
75 Ga0373955_0074287 3300035172 Bacteria 1907
76 Ga0373955_0099591 3300035172 Bacteria 1666
77 Ga0373955_0109997 3300035172 Unclassified 1592
78 Ga0316574_0183852 3300035398 Unclassified 1344
79 Ga0373924_0037067 3300035410 Bacteria 1983
80 Ga0373931_0084010 3300035691 Bacteria 1762
81 Ga0373931_0104721 3300035691 Unclassified 1596
82 Ga0373935_0059979 3300035692 Unclassified 2433
83 Ga0373935_0112948 3300035692 Unclassified 1805
84 Ga0373935_0113355 3300035692 Bacteria 1802
85 Ga0373935_0115954 3300035692 Unclassified 1783
86 Ga0373927_0105582 3300035695 Unclassified 1834
87 Ga0373933_0071443 3300035724 Bacteria 2113
88 Ga0373933_0081566 3300035724 Unclassified 1984
89 Ga0373947_0087907 3300035725 Bacteria 1933
90 Ga0373947_0151198 3300035725 Bacteria 1495
91 Ga0373937_0153925 3300036401 Bacteria 2154
92 Ga0373937_0232019 3300036401 Archaea 1738
93 Ga0316582_0079726 3300036647 Unclassified 2135
94 Ga0316584_0092941 3300036712 Unclassified 2258
95 Ga0373925_0130158 3300037068 Bacteria 1961
96 Ga0373925_0174267 3300037068 Unclassified 1699
97 Ga0451577_0060745 3300042876 Bacteria 3370
98 Ga0451577_0197600 3300042876 Unclassified 1815
99 Ga0453684_0321160 3300044712 Unclassified 1753
100 Ga0466971_0038233 3300044719 Bacteria 2153
101 Ga0451576_0130056 3300045051 Bacteria 2624
102 Ga0451576_0208788 3300045051 Unclassified 2039
103 Ga0451576_0209974 3300045051 Bacteria 2033
104 Ga0495592_0000054 3300046454 Bacteria 107373
105 Ga0495592_0126294 3300046454 Bacteria 1794
106 Ga0495592_0127990 3300046454 Unclassified 1779
107 Ga0495592_0136799 3300046454 Unclassified 1708
108 Ga0495629_0113840 3300046459 Bacteria 1885
109 Ga0495580_0106870 3300046472 Unclassified 1944
110 Ga0495582_0086721 3300046473 Bacteria 1742
111 Ga0495662_0064846 3300046476 Bacteria 1765
112 Ga0495664_0009320 3300046477 Bacteria 5490
113 Ga0495664_0103634 3300046477 Unclassified 1715
114 Ga0495664_0134998 3300046477 Unclassified 1495
115 Ga0495664_0171805 3300046477 Unclassified 1315
116 Ga0495594_0064067 3300046499 Bacteria 2037
117 Ga0495608_0074311 3300046511 Bacteria 2215
118 Ga0495618_0076607 3300046514 Unclassified 2131
119 Ga0495618_0081687 3300046514 Bacteria 2064
120 Ga0495628_0108492 3300046516 Bacteria 2137
121 Ga0495628_0146272 3300046516 Bacteria 1801
122 Ga0495628_0164050 3300046516 Unclassified 1687
123 Ga0495630_0083054 3300046517 Bacteria 2418
124 Ga0495630_0176134 3300046517 Bacteria 1630
125 Ga0495630_0200329 3300046517 Unclassified 1523
126 Ga0495666_0024315 3300046526 Bacteria 2993
127 Ga0495652_0018833 3300046529 Bacteria 6152
128 Ga0495652_0149968 3300046529 Archaea 1823
129 Ga0495652_0164182 3300046529 Bacteria 1721
130 Ga0495586_0055214 3300046535 Bacteria 2152
131 Ga0495586_0081833 3300046535 Unclassified 1774
132 Ga0495587_0073117 3300046536 Bacteria 1992
133 Ga0495645_0132899 3300046543 Bacteria 1742
134 Ga0495667_0069292 3300046559 Unclassified 2302
135 Ga0495667_0088640 3300046559 Bacteria 2005
136 Ga0495667_0104244 3300046559 Unclassified 1834
137 Ga0495656_0096882 3300046615 Unclassified 1358
138 Ga0495634_0202605 3300046642 Unclassified 1232
139 Ga0495635_0090561 3300046663 Bacteria 2092
140 Ga0495657_0083126 3300046675 Bacteria 2067
141 Ga0495599_0124325 3300046678 Bacteria 1603
142 Ga0495599_0125485 3300046678 Bacteria 1595
143 Ga0495613_0097681 3300046689 Unclassified 2122
144 Ga0495613_0109448 3300046689 Unclassified 1992
145 Ga0495613_0149665 3300046689 Bacteria 1665
146 Ga0495624_0089941 3300046690 Bacteria 1894
147 Ga0495600_0120670 3300046809 Bacteria 1705
148 Ga0495581_0114555 3300047315 Unclassified 1568
149 Ga0495581_0148411 3300047315 Unclassified 1369
150 Ga0495604_0109696 3300047317 Unclassified 2014
151 Ga0495604_0123893 3300047317 Unclassified 1867
152 Ga0495604_0160128 3300047317 Bacteria 1591
153 Ga0495674_0218026 3300047319 Bacteria 1578
154 Ga0495675_0085481 3300047444 Archaea 1983
155 Ga0495675_0098603 3300047444 Unclassified 1830
156 Ga0495675_0117909 3300047444 Bacteria 1654
157 Ga0495684_0115966 3300047471 Bacteria 2019
158 Ga0495684_0133124 3300047471 Unclassified 1866
159 Ga0495602_0139705 3300048088 Archaea 1919
160 Ga0496115_0158596 3300048918 Bacteria 1869
161 Ga0501031_0087177 3300049568 Unclassified 2035
162 Ga0501037_0119078 3300049573 Unclassified 1899
163 Ga0501038_0139854 3300049574 Unclassified 1981
164 nmdc:mga0qj67_214017_c1 3300050509 Bacteria 1565
165 nmdc:mga06r32_205463_c1 3300050510 Bacteria 1958
166 nmdc:mga08y16_208859_c1 3300050511 Unclassified 2022
167 nmdc:mga0n895_185901_c1 3300050512 Bacteria 2109
168 nmdc:mga0rr50_135066_c1 3300050513 Unclassified 1979
169 nmdc:mga08x19_261590_c1 3300050514 Unclassified 1196
170 Ga0495601_0102711 3300053077 Unclassified 1847
171 Ga0495601_0110220 3300053077 Bacteria 1782
172 Ga0495601_0138177 3300053077 Bacteria 1589
173 Ga0495619_0149664 3300053085 Bacteria 1610
174 Ga0495619_0181766 3300053085 Unclassified 1455
175 Ga0373943_0097277
176 rootL2_10187439
177 Ga0070683_100212105
178 Ga0070688_100163822
179 Ga0070705_100146638
180 Ga0070708_100134922
181 Ga0070708_100218451
182 Ga0070699_100212450
183 Ga0070686_100096560
184 Ga0068857_100132737
185 Ga0068856_100230113
186 Ga0068859_100160255
187 Ga0068859_100192021
188 Ga0068863_100134650
189 Ga0068863_100205499
190 Ga0097621_100059770
191 Ga0068871_100087960
192 Ga0075430_100173543
193 Ga0075434_100153001
194 Ga0097620_100160260
195 Ga0097620_100192020
196 Ga0075435_100177922
197 Ga0099794_10082123
198 Ga0111539_10115735
199 Ga0111539_10239882
200 Ga0105238_10087685
201 Ga0105238_10348490
202 Ga0157371_10131797
203 Ga0163163_10166651
204 Ga0163163_10231787
205 Ga0157380_10279469
206 Ga0207692_10058421
207 Ga0207694_10045883
208 Ga0207670_10001646
209 Ga0207641_10090385
210 Ga0207641_10142453
211 Ga0207676_10168726
212 Ga0207674_10093570
213 Ga0207674_10213668
214 Ga0265334_10035603
215 Ga0265334_10055446
216 Ga0265323_10045546
217 Ga0307517_10162534
218 Ga0265338_10202109
219 Ga0265338_10222635
220 Ga0265328_10042291
221 Ga0265320_10087066
222 Ga0265340_10062322
223 Ga0265327_10078982
224 Ga0265316_10108468
225 Ga0265316_10118850
226 Ga0265316_10129742
227 Ga0265316_10130455
228 Ga0265316_10143891
229 Ga0265316_10160579
230 Ga0316575_10041404
231 Ga0265314_10164541
232 Ga0265342_10088534
233 Ga0316576_10102289
234 Ga0316578_10056777
235 Ga0316577_10073394
236 Ga0316585_10029987
237 Ga0373926_0037827
238 Ga0373934_0033379
239 Ga0373923_0041481
240 Ga0373936_0038371
241 Ga0373939_0004806
242 Ga0373953_0046418
243 Ga0373954_0053414
244 Ga0373956_0049963
245 Ga0373956_0060301
246 Ga0373957_0039554
247 Ga0373957_0044879
248 Ga0373943_0080226
249 Ga0373955_0074287
250 Ga0373955_0099591
251 Ga0373955_0109997
252 Ga0316574_0183852
253 Ga0373924_0037067
254 Ga0373931_0084010
255 Ga0373931_0104721
256 Ga0373935_0059979
257 Ga0373935_0112948
258 Ga0373935_0113355
259 Ga0373935_0115954
260 Ga0373927_0105582
261 Ga0373933_0071443
262 Ga0373933_0081566
263 Ga0373947_0087907
264 Ga0373947_0151198
265 Ga0373937_0153925
266 Ga0373937_0232019
267 Ga0316582_0079726
268 Ga0316584_0092941
269 Ga0373925_0130158
270 Ga0373925_0174267
271 Ga0451577_0060745
272 Ga0451577_0197600
273 Ga0453684_0321160
274 Ga0466971_0038233
275 Ga0451576_0130056
276 Ga0451576_0208788
277 Ga0451576_0209974
278 Ga0495592_0000054
279 Ga0495592_0126294
280 Ga0495592_0127990
281 Ga0495592_0136799
282 Ga0495629_0113840
283 Ga0495580_0106870
284 Ga0495582_0086721
285 Ga0495662_0064846
286 Ga0495664_0009320
287 Ga0495664_0103634
288 Ga0495664_0134998
289 Ga0495664_0171805
290 Ga0495594_0064067
291 Ga0495608_0074311
292 Ga0495618_0076607
293 Ga0495618_0081687
294 Ga0495628_0108492
295 Ga0495628_0146272
296 Ga0495628_0164050
297 Ga0495630_0083054
298 Ga0495630_0176134
299 Ga0495630_0200329
300 Ga0495666_0024315
301 Ga0495652_0018833
302 Ga0495652_0149968
303 Ga0495652_0164182
304 Ga0495586_0055214
305 Ga0495586_0081833
306 Ga0495587_0073117
307 Ga0495645_0132899
308 Ga0495667_0069292
309 Ga0495667_0088640
310 Ga0495667_0104244
311 Ga0495656_0096882
312 Ga0495634_0202605
313 Ga0495635_0090561
314 Ga0495657_0083126
315 Ga0495599_0124325
316 Ga0495599_0125485
317 Ga0495613_0097681
318 Ga0495613_0109448
319 Ga0495613_0149665
320 Ga0495624_0089941
321 Ga0495600_0120670
322 Ga0495581_0114555
323 Ga0495581_0148411
324 Ga0495604_0109696
325 Ga0495604_0123893
326 Ga0495604_0160128
327 Ga0495674_0218026
328 Ga0495675_0085481
329 Ga0495675_0098603
330 Ga0495675_0117909
331 Ga0495684_0115966
332 Ga0495684_0133124
333 Ga0495602_0139705
334 Ga0496115_0158596
335 Ga0501031_0087177
336 Ga0501037_0119078
337 Ga0501038_0139854
338 nmdc:mga0qj67_214017_c1
339 nmdc:mga06r32_205463_c1
340 nmdc:mga08y16_208859_c1
341 nmdc:mga0n895_185901_c1
342 nmdc:mga0rr50_135066_c1
343 nmdc:mga08x19_261590_c1
344 Ga0495601_0102711
345 Ga0495601_0110220
346 Ga0495601_0138177
347 Ga0495619_0149664
348 Ga0495619_0181766

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02371

Transposase_20

Transposase IS116/IS110/IS902 family

220

302

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3r1x-assembly1.cif.gz_A crystal structure of 2-oxo-3-deoxygalactonate kinase from klebsiella pneumoniae 0.6614 24 80
7ess-assembly1.cif.gz_A structure-guided studies of the holliday junction resolvase ruvx provide novel insights into atp-stimulated cleavage of branched dna and rna substrates 0.6557 24 131
7ess-assembly1.cif.gz_B structure-guided studies of the holliday junction resolvase ruvx provide novel insights into atp-stimulated cleavage of branched dna and rna substrates 0.6405 25 131
2d0o-assembly1.cif.gz_C structure of diol dehydratase-reactivating factor complexed with adp and mg2+ 0.639 25 81
3id8-assembly1.cif.gz_A ternary complex of human pancreatic glucokinase crystallized with activator, glucose and amp-pnp 0.6004 25 83
ID Description Score Start End Superfamily
af_Q9Y4E5_884_1001_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.7822 65 103 3.40.50.1010
3tqhA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.7644 65 103 3.40.50.720
af_P0ABH0_1_81_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.6658 19 55 3.30.420.40
af_P9WGV9_1_161_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.638 26 131 3.30.420.10
af_P0A9L8_1_164_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.6371 62 104 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V6GGP7-F1-model_v4 Transposase IS110-like N-terminal domain-containing protein 0.8909 29 269 GO:0003677
GO:0004803
GO:0006313
AF-A0A2V6GGP7-F1-model_v4 Transposase IS110-like N-terminal domain-containing protein 0.8774 29 269 GO:0003677
GO:0004803
GO:0006313
AF-A0A7V4J1X4-F1-model_v4 IS110 family transposase 0.8699 139 392 GO:0003677
GO:0004803
GO:0006313
AF-A0A2V6HDI0-F1-model_v4 IS110 family transposase 0.8692 21 392 GO:0003677
GO:0004803
GO:0006313
AF-A0A7X7SC72-F1-model_v4 IS110 family transposase 0.868 19 392 GO:0003677
GO:0004803
GO:0006313

Map