F262288

General Info

Members Datasets Scaffolds Average Seq Length
173 98 346 248

Family's Representative Sequence

Representative Sequence 3300005578|Ga0068854_100136032|Ga0068854_1001360322
Length 270
Sequence MALGITGATSLPSRILETAKAGTALVLLALLAAPPAHARSAKIVDGKDLLRAMHERYQHDWYETLTFEQASITHNPDGTSKSEIWHEAALLPGRLRIDIGEPSQGNGVLVANGTLTRFQAGKVSSSRPLVHMLLVLGFDVYRQPVRRTIEQVAGQGFDLTKLHEDTWEGAPVYVVGADAGDLKTKQFWIDRKRLLCVRLIDPDQHDQGEIADTHFTDYRRVSPGWVAARVELYVAGKNVFSERYSDIRVNPKLDPAIFDPRQFATRHWEN

Samples

Sample ID Description Type Environment
1 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
41 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
42 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
43 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
61 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
62 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
63 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
68 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
69 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
70 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
72 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
73 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
74 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
75 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
84 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
85 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
86 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
87 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
88 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
92 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
93 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
94 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
95 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
96 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
97 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
98 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.95
Metatranscriptomes 4.05
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.16
Rhizosphere 96.53
Stem 0
Stem Tuber 0
Unclassified 19.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068854_100136032 3300005578 Bacteria 1881
2 LJNas_1001868 3300000546 Unclassified 2760
3 Ga0070658_10038924 3300005327 Bacteria 3835
4 Ga0070683_100598013 3300005329 Bacteria 1055
5 Ga0070660_100130024 3300005339 Bacteria 2014
6 Ga0070709_10480393 3300005434 Unclassified 941
7 Ga0070714_100025447 3300005435 Bacteria 4884
8 Ga0070714_100218568 3300005435 Bacteria 1750
9 Ga0070714_100583316 3300005435 Bacteria 1072
10 Ga0070713_100000051 3300005436 Bacteria 73697
11 Ga0070713_100046159 3300005436 Bacteria 3573
12 Ga0070713_100061321 3300005436 Bacteria 3146
13 Ga0070713_100417642 3300005436 Bacteria 1255
14 Ga0070713_100617615 3300005436 Unclassified 1031
15 Ga0070710_10005347 3300005437 Bacteria 6091
16 Ga0070710_10098099 3300005437 Bacteria 1740
17 Ga0070710_10297870 3300005437 Bacteria 1052
18 Ga0070710_10304636 3300005437 Bacteria 1041
19 Ga0070711_100000225 3300005439 Bacteria 29822
20 Ga0070711_100043938 3300005439 Bacteria 3030
21 Ga0070711_100058988 3300005439 Bacteria 2663
22 Ga0070708_100013586 3300005445 Bacteria 6674
23 Ga0070663_100162418 3300005455 Bacteria 1720
24 Ga0070681_10038680 3300005458 Unclassified 4782
25 Ga0070681_10085862 3300005458 Bacteria 3100
26 Ga0070681_10291067 3300005458 Bacteria 1543
27 Ga0070706_100274859 3300005467 Bacteria 1572
28 Ga0070707_100398567 3300005468 Unclassified 1336
29 Ga0070679_100020763 3300005530 Bacteria 6407
30 Ga0070679_100090415 3300005530 Bacteria 3050
31 Ga0070684_100473413 3300005535 Bacteria 1159
32 Ga0070697_100172127 3300005536 Bacteria 1833
33 Ga0068854_100034280 3300005578 Bacteria 3545
34 Ga0068856_100006136 3300005614 Bacteria 11796
35 Ga0068856_100357225 3300005614 Bacteria 1480
36 Ga0070717_10021938 3300006028 Bacteria 5038
37 Ga0070717_10023626 3300006028 Bacteria 4873
38 Ga0070717_10056616 3300006028 Bacteria 3240
39 Ga0070717_10102122 3300006028 Bacteria 2436
40 Ga0070717_10341592 3300006028 Bacteria 1337
41 Ga0070717_10655539 3300006028 Unclassified 953
42 Ga0070715_10001411 3300006163 Bacteria 6956
43 Ga0070715_10013618 3300006163 Bacteria 2992
44 Ga0070716_100004340 3300006173 Bacteria 6766
45 Ga0070716_100268982 3300006173 Bacteria 1170
46 Ga0070712_100005714 3300006175 Bacteria 7692
47 Ga0070712_100011727 3300006175 Bacteria 5567
48 Ga0070712_100077884 3300006175 Bacteria 2391
49 Ga0097621_100576518 3300006237 Unclassified 1026
50 Ga0075436_100028322 3300006914 Bacteria 3854
51 Ga0105240_10026524 3300009093 Bacteria 7602
52 Ga0105240_10044212 3300009093 Bacteria 5663
53 Ga0105240_10175548 3300009093 Bacteria 2533
54 Ga0105241_10000118 3300009174 Bacteria 57242
55 Ga0105241_10430081 3300009174 Bacteria 1164
56 Ga0105237_10617547 3300009545 Bacteria 1091
57 Ga0105238_10055224 3300009551 Bacteria 3988
58 Ga0105238_10442058 3300009551 Bacteria 1297
59 Ga0099796_10096008 3300010159 Unclassified 1108
60 Ga0105239_10052662 3300010375 Bacteria 4463
61 Ga0157371_10019992 3300013102 Bacteria 4930
62 Ga0157370_10043237 3300013104 Bacteria 4336
63 Ga0157369_10014392 3300013105 Bacteria 8935
64 Ga0157369_10048960 3300013105 Bacteria 4583
65 Ga0157374_10509149 3300013296 Bacteria 1209
66 Ga0157372_10015707 3300013307 Bacteria 8119
67 Ga0157372_10087351 3300013307 Bacteria 3538
68 Ga0157372_10180004 3300013307 Bacteria 2447
69 Ga0157372_10217784 3300013307 Bacteria 2213
70 Ga0163163_10073376 3300014325 Bacteria 3413
71 Ga0157376_10121261 3300014969 Bacteria 2318
72 Ga0213875_10002081 3300021388 Bacteria 12272
73 Ga0224569_100808 3300022732 Bacteria 2661
74 Ga0224572_1000442 3300024225 Bacteria 4834
75 Ga0228598_1003902 3300024227 Bacteria 3179
76 Ga0207692_10092470 3300025898 Bacteria 1643
77 Ga0207699_10006089 3300025906 Bacteria 5812
78 Ga0207699_10495581 3300025906 Bacteria 881
79 Ga0207705_10004564 3300025909 Bacteria 10460
80 Ga0207684_10539253 3300025910 Bacteria 999
81 Ga0207654_10000528 3300025911 Bacteria 21839
82 Ga0207695_10027591 3300025913 Bacteria 6320
83 Ga0207693_10000734 3300025915 Bacteria 29569
84 Ga0207693_10015913 3300025915 Bacteria 6022
85 Ga0207693_10023330 3300025915 Bacteria 4913
86 Ga0207663_10001672 3300025916 Bacteria 10446
87 Ga0207663_10009710 3300025916 Bacteria 5093
88 Ga0207663_10013571 3300025916 Bacteria 4432
89 Ga0207663_10033646 3300025916 Bacteria 3056
90 Ga0207663_10468761 3300025916 Unclassified 974
91 Ga0207652_10155660 3300025921 Bacteria 2047
92 Ga0207646_10608546 3300025922 Unclassified 980
93 Ga0207694_10091484 3300025924 Bacteria 2401
94 Ga0207700_10000181 3300025928 Bacteria 37865
95 Ga0207700_10031495 3300025928 Bacteria 3769
96 Ga0207664_10000097 3300025929 Bacteria 80906
97 Ga0207664_10244029 3300025929 Bacteria 1565
98 Ga0207664_10351238 3300025929 Bacteria 1305
99 Ga0207665_10004116 3300025939 Bacteria 9701
100 Ga0207665_10007799 3300025939 Bacteria 7064
101 Ga0207665_10243576 3300025939 Bacteria 1326
102 Ga0207665_10443458 3300025939 Unclassified 995
103 Ga0207667_10017329 3300025949 Bacteria 8111
104 Ga0207667_10186893 3300025949 Bacteria 2127
105 Ga0207667_10241077 3300025949 Bacteria 1850
106 Ga0207667_10402982 3300025949 Unclassified 1393
107 Ga0207640_10001475 3300025981 Bacteria 12685
108 Ga0207678_10007016 3300026067 Bacteria 10000
109 Ga0265354_1000010 3300028016 Bacteria 29992
110 Ga0265356_1005640 3300028017 Bacteria 1485
111 Ga0265338_10153885 3300028800 Bacteria 1784
112 Ga0265770_1002202 3300030878 Unclassified 2652
113 Ga0265765_1000422 3300030879 Unclassified 3271
114 Ga0265760_10002731 3300031090 Bacteria 5165
115 Ga0265760_10003556 3300031090 Bacteria 4520
116 Ga0265760_10033635 3300031090 Unclassified 1515
117 Ga0265760_10046199 3300031090 Unclassified 1306
118 Ga0265760_10066679 3300031090 Unclassified 1100
119 Ga0265331_10079736 3300031250 Bacteria 1523
120 Ga0265316_10012003 3300031344 Bacteria 7787
121 Ga0316212_1002006 3300033547 Unclassified 2866
122 Ga0373934_0013345 3300035086 Bacteria 3106
123 Ga0373923_0014423 3300035111 Bacteria 2968
124 Ga0373945_0029223 3300035116 Bacteria 1935
125 Ga0373945_0037524 3300035116 Unclassified 1740
126 Ga0373954_0034116 3300035118 Bacteria 2356
127 Ga0373943_0000993 3300035170 Bacteria 12593
128 Ga0373943_0105796 3300035170 Bacteria 1478
129 Ga0373955_0208688 3300035172 Unclassified 1164
130 Ga0373955_0309377 3300035172 Unclassified 953
131 Ga0373924_0087348 3300035410 Unclassified 1331
132 Ga0373935_0003810 3300035692 Bacteria 8799
133 Ga0373935_0013318 3300035692 Bacteria 4962
134 Ga0373927_0000041 3300035695 Bacteria 94763
135 Ga0373927_0365080 3300035695 Unclassified 952
136 Ga0373947_0004642 3300035725 Bacteria 8058
137 Ga0373947_0155435 3300035725 Unclassified 1476
138 Ga0373937_0028336 3300036401 Bacteria 5067
139 Ga0373937_0074295 3300036401 Bacteria 3137
140 Ga0373937_0163386 3300036401 Unclassified 2088
141 Ga0373937_0320208 3300036401 Bacteria 1467
142 Ga0373937_0383174 3300036401 Bacteria 1334
143 Ga0373925_0017421 3300037068 Bacteria 5207
144 Ga0373925_0047419 3300037068 Bacteria 3198
145 Ga0373925_0067046 3300037068 Bacteria 2706
146 Ga0436364_0535331 3300037853 Bacteria 45862
147 Ga0436365_1464713 3300039437 Bacteria 1168
148 Ga0495603_0180626 3300046455 Unclassified 1221
149 Ga0495603_0264229 3300046455 Bacteria 990
150 Ga0495641_0118049 3300046461 Unclassified 1183
151 Ga0495651_0109769 3300046462 Bacteria 2042
152 Ga0495580_0001579 3300046472 Bacteria 20013
153 Ga0495580_0003850 3300046472 Bacteria 12699
154 Ga0495580_0005189 3300046472 Bacteria 10823
155 Ga0495580_0107331 3300046472 Unclassified 1939
156 Ga0495580_0123478 3300046472 Bacteria 1797
157 Ga0495664_0158143 3300046477 Bacteria 1375
158 Ga0495584_0151270 3300046491 Bacteria 1179
159 Ga0495594_0505622 3300046499 Bacteria 686
160 Ga0495630_0084096 3300046517 Unclassified 2403
161 Ga0495630_0329715 3300046517 Bacteria 1167
162 Ga0495645_0128596 3300046543 Bacteria 1778
163 Ga0495659_0099232 3300046664 Unclassified 1126
164 Ga0495674_0028816 3300047319 Bacteria 5059
165 Ga0495674_0060532 3300047319 Bacteria 3303
166 Ga0495674_0066423 3300047319 Unclassified 3129
167 Ga0495674_0439146 3300047319 Unclassified 1050
168 Ga0495684_0198566 3300047471 Bacteria 1479
169 Ga0496100_0265575 3300048903 Bacteria 1274
170 Ga0496115_0029256 3300048918 Bacteria 4326
171 nmdc:mga08x19_27022_c1 3300050514 Bacteria 3587
172 Ga0495601_0161215 3300053077 Bacteria 1466
173 Ga0495601_0382745 3300053077 Unclassified 913
174 Ga0068854_100136032
175 LJNas_1001868
176 Ga0070658_10038924
177 Ga0070683_100598013
178 Ga0070660_100130024
179 Ga0070709_10480393
180 Ga0070714_100025447
181 Ga0070714_100218568
182 Ga0070714_100583316
183 Ga0070713_100000051
184 Ga0070713_100046159
185 Ga0070713_100061321
186 Ga0070713_100417642
187 Ga0070713_100617615
188 Ga0070710_10005347
189 Ga0070710_10098099
190 Ga0070710_10297870
191 Ga0070710_10304636
192 Ga0070711_100000225
193 Ga0070711_100043938
194 Ga0070711_100058988
195 Ga0070708_100013586
196 Ga0070663_100162418
197 Ga0070681_10038680
198 Ga0070681_10085862
199 Ga0070681_10291067
200 Ga0070706_100274859
201 Ga0070707_100398567
202 Ga0070679_100020763
203 Ga0070679_100090415
204 Ga0070684_100473413
205 Ga0070697_100172127
206 Ga0068854_100034280
207 Ga0068856_100006136
208 Ga0068856_100357225
209 Ga0070717_10021938
210 Ga0070717_10023626
211 Ga0070717_10056616
212 Ga0070717_10102122
213 Ga0070717_10341592
214 Ga0070717_10655539
215 Ga0070715_10001411
216 Ga0070715_10013618
217 Ga0070716_100004340
218 Ga0070716_100268982
219 Ga0070712_100005714
220 Ga0070712_100011727
221 Ga0070712_100077884
222 Ga0097621_100576518
223 Ga0075436_100028322
224 Ga0105240_10026524
225 Ga0105240_10044212
226 Ga0105240_10175548
227 Ga0105241_10000118
228 Ga0105241_10430081
229 Ga0105237_10617547
230 Ga0105238_10055224
231 Ga0105238_10442058
232 Ga0099796_10096008
233 Ga0105239_10052662
234 Ga0157371_10019992
235 Ga0157370_10043237
236 Ga0157369_10014392
237 Ga0157369_10048960
238 Ga0157374_10509149
239 Ga0157372_10015707
240 Ga0157372_10087351
241 Ga0157372_10180004
242 Ga0157372_10217784
243 Ga0163163_10073376
244 Ga0157376_10121261
245 Ga0213875_10002081
246 Ga0224569_100808
247 Ga0224572_1000442
248 Ga0228598_1003902
249 Ga0207692_10092470
250 Ga0207699_10006089
251 Ga0207699_10495581
252 Ga0207705_10004564
253 Ga0207684_10539253
254 Ga0207654_10000528
255 Ga0207695_10027591
256 Ga0207693_10000734
257 Ga0207693_10015913
258 Ga0207693_10023330
259 Ga0207663_10001672
260 Ga0207663_10009710
261 Ga0207663_10013571
262 Ga0207663_10033646
263 Ga0207663_10468761
264 Ga0207652_10155660
265 Ga0207646_10608546
266 Ga0207694_10091484
267 Ga0207700_10000181
268 Ga0207700_10031495
269 Ga0207664_10000097
270 Ga0207664_10244029
271 Ga0207664_10351238
272 Ga0207665_10004116
273 Ga0207665_10007799
274 Ga0207665_10243576
275 Ga0207665_10443458
276 Ga0207667_10017329
277 Ga0207667_10186893
278 Ga0207667_10241077
279 Ga0207667_10402982
280 Ga0207640_10001475
281 Ga0207678_10007016
282 Ga0265354_1000010
283 Ga0265356_1005640
284 Ga0265338_10153885
285 Ga0265770_1002202
286 Ga0265765_1000422
287 Ga0265760_10002731
288 Ga0265760_10003556
289 Ga0265760_10033635
290 Ga0265760_10046199
291 Ga0265760_10066679
292 Ga0265331_10079736
293 Ga0265316_10012003
294 Ga0316212_1002006
295 Ga0373934_0013345
296 Ga0373923_0014423
297 Ga0373945_0029223
298 Ga0373945_0037524
299 Ga0373954_0034116
300 Ga0373943_0000993
301 Ga0373943_0105796
302 Ga0373955_0208688
303 Ga0373955_0309377
304 Ga0373924_0087348
305 Ga0373935_0003810
306 Ga0373935_0013318
307 Ga0373927_0000041
308 Ga0373927_0365080
309 Ga0373947_0004642
310 Ga0373947_0155435
311 Ga0373937_0028336
312 Ga0373937_0074295
313 Ga0373937_0163386
314 Ga0373937_0320208
315 Ga0373937_0383174
316 Ga0373925_0017421
317 Ga0373925_0047419
318 Ga0373925_0067046
319 Ga0436364_0535331
320 Ga0436365_1464713
321 Ga0495603_0180626
322 Ga0495603_0264229
323 Ga0495641_0118049
324 Ga0495651_0109769
325 Ga0495580_0001579
326 Ga0495580_0003850
327 Ga0495580_0005189
328 Ga0495580_0107331
329 Ga0495580_0123478
330 Ga0495664_0158143
331 Ga0495584_0151270
332 Ga0495594_0505622
333 Ga0495630_0084096
334 Ga0495630_0329715
335 Ga0495645_0128596
336 Ga0495659_0099232
337 Ga0495674_0028816
338 Ga0495674_0060532
339 Ga0495674_0066423
340 Ga0495674_0439146
341 Ga0495684_0198566
342 Ga0496100_0265575
343 Ga0496115_0029256
344 nmdc:mga08x19_27022_c1
345 Ga0495601_0161215
346 Ga0495601_0382745

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
4z48-assembly2.cif.gz_B crystal structure of a duf1329 family protein (despig_00262) from desulfovibrio piger atcc 29098 at 1.75 a resolution 0.6628 27 240
3aoe-assembly1.cif.gz_C crystal structure of hetero-hexameric glutamate dehydrogenase from thermus thermophilus (leu bound form) 0.6229 47 71
2w7q-assembly2.cif.gz_B structure of pseudomonas aeruginosa lola 0.6172 30 239
3bk5-assembly1.cif.gz_A crystal structure of putative outer membrane lipoprotein-sorting protein domain from vibrio parahaemolyticus 0.6139 27 245
3buu-assembly2.cif.gz_B crystal structure of lola superfamily protein ne2245 from nitrosomonas europaea 0.6106 31 239
ID Description Score Start End Superfamily
af_Q9XWW8_212_336_2.30.29.170 Mainly Beta;Roll;PH-domain like; 0.6673 44 82 2.30.29.170
af_Q9VBS4_51_333_3.90.1200.10 Alpha Beta;Alpha-Beta Complex;Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2;Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.6379 39 71 3.90.1200.10
af_Q4DFP6_3_162_3.30.1460.50 Alpha Beta;2-Layer Sandwich;Yope Regulator; Chain: A,; 0.62 43 80 3.30.1460.50
2w7qB00 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A;Lipoprotein localisation LolA/LolB/LppX 0.6172 30 239 2.50.20.10
af_A4I1J2_93_221_2.30.29.170 Mainly Beta;Roll;PH-domain like; 0.6165 43 82 2.30.29.170
ID Description Score Start End GO Terms
AF-A0A2V7FVL1-F1-model_v4 Uncharacterized protein 0.9865 31 247
AF-A0A2V8WD61-F1-model_v4 Uncharacterized protein 0.9766 19 202
AF-A0A2V9V3X2-F1-model_v4 Uncharacterized protein 0.9765 138 204
AF-A0A285YXR9-F1-model_v4 Outer membrane lipoprotein-sorting protein 0.9757 20 248
AF-A0A2V7X8K5-F1-model_v4 Outer membrane lipoprotein-sorting protein 0.972 14 251

Map