F261902

General Info

Members Datasets Scaffolds Average Seq Length
173 121 346 222

Family's Representative Sequence

Representative Sequence 3300005293|Ga0065715_10016591|Ga0065715_100165913
Length 246
Sequence MTRTFTNAPGISAPLKESNSRGGAPHKPEGSILLPQRVLEPIERISEVLFGLIMVLTITCSFSVAEADRKNIRAMLLGALGCNLAWGIIDGFMYLMARFSSHGQSISKVRALRKSRTPEDAHRIIGEALPPLVMSVLSYAELESIRQKLMGLPQPPEGPKLAREDWLGALAVFLLVSLSTFPVVMPFILVSDVRLALRVSNGIALLMLFGTGYAFGRYAGHRPLRTGFSMVLIGTCLVAITMAFGG

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
41 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
74 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
82 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
83 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
84 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
85 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
86 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
89 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
90 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
94 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
95 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
96 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
97 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
98 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
99 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
100 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
103 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
104 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
105 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
106 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
107 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
114 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
115 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
116 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
117 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
118 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
119 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
120 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
121 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.73
Nodule 0
Rhizoplane 6.36
Rhizosphere 91.33
Stem 0
Stem Tuber 0
Unclassified 25.43

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10016591 3300005293 Bacteria 1937
2 Ga0065715_10016490 3300005293 Bacteria 3099
3 Ga0070658_10027504 3300005327 Unclassified 4563
4 Ga0070666_10109673 3300005335 Bacteria 1908
5 Ga0070660_100045990 3300005339 Bacteria 3344
6 Ga0070669_100052522 3300005353 Unclassified 2982
7 Ga0070675_100499526 3300005354 Bacteria 1096
8 Ga0070671_100017619 3300005355 Bacteria 5788
9 Ga0070671_100042440 3300005355 Bacteria 3780
10 Ga0070671_100225381 3300005355 Bacteria 1590
11 Ga0070674_101055457 3300005356 Unclassified 715
12 Ga0070673_100128873 3300005364 Bacteria 2120
13 Ga0070673_100336095 3300005364 Bacteria 1337
14 Ga0070659_100033633 3300005366 Unclassified 3983
15 Ga0070667_100021727 3300005367 Bacteria 5325
16 Ga0070713_100471664 3300005436 Bacteria 1181
17 Ga0070700_100325903 3300005441 Bacteria 1130
18 Ga0070672_100229750 3300005543 Bacteria 1558
19 Ga0070672_100808664 3300005543 Unclassified 825
20 Ga0070665_100015095 3300005548 Bacteria 7754
21 Ga0070665_100137726 3300005548 Unclassified 2444
22 Ga0068855_100053245 3300005563 Unclassified 4762
23 Ga0068854_100005686 3300005578 Bacteria 7882
24 Ga0068856_100014405 3300005614 Bacteria 7642
25 Ga0070702_100480558 3300005615 Unclassified 908
26 Ga0068859_100359811 3300005617 Bacteria 1550
27 Ga0068859_100404362 3300005617 Bacteria 1461
28 Ga0068859_100515976 3300005617 Bacteria 1290
29 Ga0068863_100131335 3300005841 Unclassified 2391
30 Ga0068863_100734244 3300005841 Bacteria 983
31 Ga0081455_10105017 3300005937 Bacteria 2259
32 Ga0068871_100138484 3300006358 Unclassified 2068
33 Ga0075428_100043680 3300006844 Bacteria 4928
34 Ga0075431_100066611 3300006847 Bacteria 3718
35 Ga0075431_100107261 3300006847 Bacteria 2882
36 Ga0075431_100664045 3300006847 Bacteria 1022
37 Ga0068865_100094797 3300006881 Unclassified 2173
38 Ga0097620_100359806 3300006931 Bacteria 1550
39 Ga0097620_100404346 3300006931 Bacteria 1461
40 Ga0097620_100515970 3300006931 Bacteria 1290
41 Ga0111539_10007088 3300009094 Bacteria 14366
42 Ga0105247_10055207 3300009101 Unclassified 2451
43 Ga0105247_10250116 3300009101 Bacteria 1211
44 Ga0114129_10140858 3300009147 Bacteria 3306
45 Ga0114129_10528116 3300009147 Unclassified 1538
46 Ga0105248_10274176 3300009177 Bacteria 1899
47 Ga0105238_10245774 3300009551 Bacteria 1767
48 Ga0157374_10122618 3300013296 Unclassified 2510
49 Ga0157374_10360222 3300013296 Bacteria 1446
50 Ga0163162_10189220 3300013306 Unclassified 2185
51 Ga0163162_10204215 3300013306 Bacteria 2105
52 Ga0163162_10633248 3300013306 Bacteria 1194
53 Ga0163162_10848054 3300013306 Unclassified 1029
54 Ga0157375_10704583 3300013308 Bacteria 1163
55 Ga0163163_10455017 3300014325 Bacteria 1340
56 Ga0157380_10920845 3300014326 Bacteria 902
57 Ga0157379_10000689 3300014968 Bacteria 27401
58 Ga0157379_10680968 3300014968 Bacteria 964
59 Ga0157379_11053771 3300014968 Bacteria 777
60 Ga0157376_10026028 3300014969 Unclassified 4617
61 Ga0157376_10066415 3300014969 Bacteria 3049
62 Ga0157376_10200864 3300014969 Bacteria 1834
63 Ga0157376_10345078 3300014969 Bacteria 1423
64 Ga0157376_10556849 3300014969 Bacteria 1135
65 Ga0157376_10735897 3300014969 Unclassified 994
66 Ga0182006_1018649 3300015261 Unclassified 2928
67 Ga0207697_10000982 3300025315 Bacteria 15993
68 Ga0207656_10033624 3300025321 Bacteria 2137
69 Ga0207710_10027309 3300025900 Unclassified 2470
70 Ga0207688_10004352 3300025901 Bacteria 7725
71 Ga0207680_10315015 3300025903 Unclassified 1093
72 Ga0207707_10202629 3300025912 Bacteria 1730
73 Ga0207671_10075239 3300025914 Unclassified 2525
74 Ga0207660_10144320 3300025917 Bacteria 1823
75 Ga0207657_10000821 3300025919 Bacteria 32805
76 Ga0207649_10143689 3300025920 Bacteria 1636
77 Ga0207649_10383859 3300025920 Bacteria 1047
78 Ga0207694_10185118 3300025924 Bacteria 1690
79 Ga0207650_10438835 3300025925 Bacteria 1085
80 Ga0207644_10097300 3300025931 Unclassified 2204
81 Ga0207644_10377418 3300025931 Bacteria 1156
82 Ga0207706_10024930 3300025933 Bacteria 5362
83 Ga0207670_10211737 3300025936 Bacteria 1479
84 Ga0207669_10094745 3300025937 Bacteria 1955
85 Ga0207669_10477109 3300025937 Unclassified 993
86 Ga0207665_10269042 3300025939 Bacteria 1265
87 Ga0207691_10741551 3300025940 Unclassified 827
88 Ga0207711_10182196 3300025941 Bacteria 1911
89 Ga0207679_10018400 3300025945 Unclassified 4680
90 Ga0207679_10211923 3300025945 Unclassified 1625
91 Ga0207651_10343326 3300025960 Bacteria 1255
92 Ga0207658_10060004 3300025986 Unclassified 2836
93 Ga0207678_10576661 3300026067 Unclassified 985
94 Ga0207708_10034713 3300026075 Bacteria 3837
95 Ga0207702_10048184 3300026078 Unclassified 3593
96 Ga0207641_10231038 3300026088 Bacteria 1719
97 Ga0207641_10608880 3300026088 Bacteria 1070
98 Ga0207641_10936295 3300026088 Unclassified 861
99 Ga0207676_10210899 3300026095 Bacteria 1723
100 Ga0207698_10815743 3300026142 Bacteria 936
101 Ga0207428_10087520 3300027907 Unclassified 2423
102 Ga0268266_10006456 3300028379 Bacteria 10737
103 Ga0268266_10340639 3300028379 Bacteria 1407
104 Ga0268266_10540717 3300028379 Bacteria 1115
105 Ga0268266_10593187 3300028379 Unclassified 1064
106 Ga0268265_10667071 3300028380 Archaea 1001
107 Ga0268265_10882115 3300028380 Bacteria 877
108 Ga0265338_10051746 3300028800 Bacteria 3694
109 Ga0265325_10013379 3300031241 Bacteria 4673
110 Ga0265340_10012708 3300031247 Bacteria 4444
111 Ga0265313_10112684 3300031595 Bacteria 1194
112 Ga0307410_10025282 3300031852 Bacteria 3723
113 Ga0307406_10027318 3300031901 Bacteria 3438
114 Ga0307412_10103826 3300031911 Bacteria 2015
115 Ga0307416_100172979 3300032002 Bacteria 2013
116 Ga0307411_10034841 3300032005 Bacteria 3137
117 Ga0307415_100014787 3300032126 Bacteria 4601
118 Ga0373943_0131808 3300035170 Unclassified 1338
119 Ga0373946_0094472 3300035171 Unclassified 1330
120 Ga0373935_0011861 3300035692 Bacteria 5236
121 Ga0373935_0596582 3300035692 Bacteria 807
122 Ga0373927_0006246 3300035695 Bacteria 8132
123 Ga0373947_0018550 3300035725 Bacteria 4006
124 Ga0373937_0009135 3300036401 Bacteria 8601
125 Ga0373925_0004210 3300037068 Bacteria 10924
126 Ga0451789_0215532 3300041443 Bacteria 902
127 Ga0451853_1525574 3300041512 Bacteria 1125
128 Ga0451577_0002013 3300042876 Bacteria 25250
129 Ga0451577_0005651 3300042876 Bacteria 12701
130 Ga0451577_0012794 3300042876 Bacteria 7873
131 Ga0453684_0014646 3300044712 Bacteria 12517
132 Ga0453684_0015244 3300044712 Bacteria 12188
133 Ga0453684_0027488 3300044712 Bacteria 8156
134 Ga0453684_0045505 3300044712 Bacteria 5853
135 Ga0453684_0053484 3300044712 Bacteria 5270
136 Ga0453684_0100005 3300044712 Bacteria 3550
137 Ga0495638_0030230 3300046460 Bacteria 3488
138 Ga0495639_0089249 3300046475 Bacteria 1444
139 Ga0495662_0017688 3300046476 Unclassified 3451
140 Ga0495585_0173458 3300046492 Unclassified 1112
141 Ga0495594_0021691 3300046499 Bacteria 3430
142 Ga0495630_0000326 3300046517 Bacteria 37927
143 Ga0495630_0026272 3300046517 Bacteria 4310
144 Ga0495666_0011670 3300046526 Unclassified 4380
145 Ga0495586_0000001 3300046535 Bacteria 231314
146 Ga0495634_0009564 3300046642 Bacteria 7144
147 Ga0495659_0162552 3300046664 Unclassified 902
148 Ga0495657_0074824 3300046675 Bacteria 2203
149 Ga0495613_0078128 3300046689 Bacteria 2408
150 Ga0495636_0015594 3300047318 Bacteria 3028
151 Ga0495636_0209165 3300047318 Bacteria 893
152 Ga0495674_0011233 3300047319 Bacteria 8455
153 Ga0495676_0040591 3300047321 Unclassified 3838
154 Ga0496104_0133674 3300048907 Unclassified 2383
155 Ga0496104_0290724 3300048907 Bacteria 1547
156 Ga0496105_0053211 3300048908 Bacteria 3343
157 Ga0496105_0411354 3300048908 Unclassified 1072
158 Ga0496110_0081875 3300048913 Unclassified 2878
159 Ga0496113_0452570 3300048916 Bacteria 1032
160 Ga0496114_0048771 3300048917 Bacteria 3523
161 Ga0496115_0049071 3300048918 Bacteria 3377
162 Ga0496115_0068112 3300048918 Bacteria 2881
163 Ga0496115_0685465 3300048918 Bacteria 807
164 nmdc:mga06r32_826206_c1 3300050510 Bacteria 886
165 nmdc:mga08y16_33999_c1 3300050511 Bacteria 5355
166 nmdc:mga08y16_44861_c1 3300050511 Bacteria 4633
167 nmdc:mga08y16_92023_c1 3300050511 Bacteria 3160
168 nmdc:mga0n895_676296_c1 3300050512 Bacteria 1029
169 Ga0495595_0040657 3300053084 Bacteria 2125
170 Ga0495619_0082940 3300053085 Bacteria 2161
171 Ga0500568_0145783 3300053139 Unclassified 877
172 Ga0500616_0112328 3300053153 Bacteria 1314
173 Ga0500627_0141372 3300053158 Bacteria 1087
174 Ga0065715_10016591
175 Ga0065715_10016490
176 Ga0070658_10027504
177 Ga0070666_10109673
178 Ga0070660_100045990
179 Ga0070669_100052522
180 Ga0070675_100499526
181 Ga0070671_100017619
182 Ga0070671_100042440
183 Ga0070671_100225381
184 Ga0070674_101055457
185 Ga0070673_100128873
186 Ga0070673_100336095
187 Ga0070659_100033633
188 Ga0070667_100021727
189 Ga0070713_100471664
190 Ga0070700_100325903
191 Ga0070672_100229750
192 Ga0070672_100808664
193 Ga0070665_100015095
194 Ga0070665_100137726
195 Ga0068855_100053245
196 Ga0068854_100005686
197 Ga0068856_100014405
198 Ga0070702_100480558
199 Ga0068859_100359811
200 Ga0068859_100404362
201 Ga0068859_100515976
202 Ga0068863_100131335
203 Ga0068863_100734244
204 Ga0081455_10105017
205 Ga0068871_100138484
206 Ga0075428_100043680
207 Ga0075431_100066611
208 Ga0075431_100107261
209 Ga0075431_100664045
210 Ga0068865_100094797
211 Ga0097620_100359806
212 Ga0097620_100404346
213 Ga0097620_100515970
214 Ga0111539_10007088
215 Ga0105247_10055207
216 Ga0105247_10250116
217 Ga0114129_10140858
218 Ga0114129_10528116
219 Ga0105248_10274176
220 Ga0105238_10245774
221 Ga0157374_10122618
222 Ga0157374_10360222
223 Ga0163162_10189220
224 Ga0163162_10204215
225 Ga0163162_10633248
226 Ga0163162_10848054
227 Ga0157375_10704583
228 Ga0163163_10455017
229 Ga0157380_10920845
230 Ga0157379_10000689
231 Ga0157379_10680968
232 Ga0157379_11053771
233 Ga0157376_10026028
234 Ga0157376_10066415
235 Ga0157376_10200864
236 Ga0157376_10345078
237 Ga0157376_10556849
238 Ga0157376_10735897
239 Ga0182006_1018649
240 Ga0207697_10000982
241 Ga0207656_10033624
242 Ga0207710_10027309
243 Ga0207688_10004352
244 Ga0207680_10315015
245 Ga0207707_10202629
246 Ga0207671_10075239
247 Ga0207660_10144320
248 Ga0207657_10000821
249 Ga0207649_10143689
250 Ga0207649_10383859
251 Ga0207694_10185118
252 Ga0207650_10438835
253 Ga0207644_10097300
254 Ga0207644_10377418
255 Ga0207706_10024930
256 Ga0207670_10211737
257 Ga0207669_10094745
258 Ga0207669_10477109
259 Ga0207665_10269042
260 Ga0207691_10741551
261 Ga0207711_10182196
262 Ga0207679_10018400
263 Ga0207679_10211923
264 Ga0207651_10343326
265 Ga0207658_10060004
266 Ga0207678_10576661
267 Ga0207708_10034713
268 Ga0207702_10048184
269 Ga0207641_10231038
270 Ga0207641_10608880
271 Ga0207641_10936295
272 Ga0207676_10210899
273 Ga0207698_10815743
274 Ga0207428_10087520
275 Ga0268266_10006456
276 Ga0268266_10340639
277 Ga0268266_10540717
278 Ga0268266_10593187
279 Ga0268265_10667071
280 Ga0268265_10882115
281 Ga0265338_10051746
282 Ga0265325_10013379
283 Ga0265340_10012708
284 Ga0265313_10112684
285 Ga0307410_10025282
286 Ga0307406_10027318
287 Ga0307412_10103826
288 Ga0307416_100172979
289 Ga0307411_10034841
290 Ga0307415_100014787
291 Ga0373943_0131808
292 Ga0373946_0094472
293 Ga0373935_0011861
294 Ga0373935_0596582
295 Ga0373927_0006246
296 Ga0373947_0018550
297 Ga0373937_0009135
298 Ga0373925_0004210
299 Ga0451789_0215532
300 Ga0451853_1525574
301 Ga0451577_0002013
302 Ga0451577_0005651
303 Ga0451577_0012794
304 Ga0453684_0014646
305 Ga0453684_0015244
306 Ga0453684_0027488
307 Ga0453684_0045505
308 Ga0453684_0053484
309 Ga0453684_0100005
310 Ga0495638_0030230
311 Ga0495639_0089249
312 Ga0495662_0017688
313 Ga0495585_0173458
314 Ga0495594_0021691
315 Ga0495630_0000326
316 Ga0495630_0026272
317 Ga0495666_0011670
318 Ga0495586_0000001
319 Ga0495634_0009564
320 Ga0495659_0162552
321 Ga0495657_0074824
322 Ga0495613_0078128
323 Ga0495636_0015594
324 Ga0495636_0209165
325 Ga0495674_0011233
326 Ga0495676_0040591
327 Ga0496104_0133674
328 Ga0496104_0290724
329 Ga0496105_0053211
330 Ga0496105_0411354
331 Ga0496110_0081875
332 Ga0496113_0452570
333 Ga0496114_0048771
334 Ga0496115_0049071
335 Ga0496115_0068112
336 Ga0496115_0685465
337 nmdc:mga06r32_826206_c1
338 nmdc:mga08y16_33999_c1
339 nmdc:mga08y16_44861_c1
340 nmdc:mga08y16_92023_c1
341 nmdc:mga0n895_676296_c1
342 Ga0495595_0040657
343 Ga0495619_0082940
344 Ga0500568_0145783
345 Ga0500616_0112328
346 Ga0500627_0141372

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01988

VIT1

VIT family

118

246

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6iu4-assembly1.cif.gz_A crystal structure of iron transporter vit1 with cobalt ion 0.6249 14 218
6iu4-assembly1.cif.gz_A crystal structure of iron transporter vit1 with cobalt ion 0.5869 14 218
7xgg-assembly2.cif.gz_D crystal structure of bcl-xl in complex with computationally designed inhibitor protein 0.3431 9 195
7xgg-assembly2.cif.gz_D crystal structure of bcl-xl in complex with computationally designed inhibitor protein 0.3249 9 195
6z0c-assembly1.cif.gz_A structure of in silico modelled artificial maquette-3 protein 0.2958 8 216
ID Description Score Start End Superfamily
af_K7MU65_40_256_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7048 17 220 1.20.1260.10
af_Q4DKQ8_55_270_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7043 18 220 1.20.1260.10
af_Q54H42_48_275_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.6988 18 220 1.20.1260.10
af_Q54H47_119_343_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.6909 18 220 1.20.1260.10
af_I1K5I4_32_243_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.6871 17 220 1.20.1260.10
ID Description Score Start End GO Terms
AF-A0A2V9V9H4-F1-model_v4 VIT family protein 0.9546 11 220 GO:0005384
GO:0012505
GO:0016020
GO:0030026
AF-A0A2V9WIE9-F1-model_v4 VIT family protein 0.9534 51 220 GO:0005384
GO:0012505
GO:0016020
GO:0030026
AF-A0A317HVL5-F1-model_v4 VIT family protein 0.9533 30 220 GO:0005384
GO:0012505
GO:0016020
GO:0030026
AF-A0A1I3VVY9-F1-model_v4 VIT family protein 0.9501 51 220 GO:0016020
AF-A0A317HVL5-F1-model_v4 VIT family protein 0.9391 30 220 GO:0005384
GO:0012505
GO:0016020
GO:0030026

Map