F261722

General Info

Members Datasets Scaffolds Average Seq Length
172 147 344 1134

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2912757875|2912761277
Length 1265
Sequence DPRLLRYARATRRFLVAVVVLGLAGAGLVVAQALIIAEVVVGAFGDGLDASGLRTPLLLLGAVAAGRGLVAWLTELAAHRASAAVKSELRGRLLERAAELGPGWLSGQRTGSLVALATRGVDALDDYFARYLPQLGLAVVVPVAVLARIVTDDWVSAGVIVLTLPLIPLFMVLIGWATQSRMDRQWQLLSRLSGHFLDVVAGLPTLKVFGRAKAQAESVREITSEYRRATLRTLRIAFLSSFALELLATLSVALVAVGIGMRLVHGDLDLYTGLVVLILAPEAYLPLRQVGAQYHAAAEGLAAAEEIFAVLETGAGAGGAGGASGAAAGASGGITEVPDSPRLEFGGVTVRHEGRTEPSLDSATLVVEPGETVALVGPSGAGKTTLLNVLLGFTAPTEGRVRVGGTDLLSLDLDRWRERIAWVPQHPYLFAGTIAENVRLARPDADATAVRKALRDAGAYDFVTALPQGADTLLGEDGAGLSSGQRQRLALARAFLADRPLLLLDEPTAALDGETEAGIVEAVRRLAVGRTVLLVIHRPALLSVADRVIELGDRTARADAGAVIWPSLTGRAPAEPASGLGGIGSPAAAGAAAGSEGAVIWPSGTGRASASASAESASGLGGIGSPAGAGAAAGSGADVTDTAPDRPTDARRTSASTAAEAGSGAPGGTRGAEGSGVVGDVRAHPLARMRAAVGALRGRFVVALVLGSLALGSAVGLMAVSGYLISRASEQPPVLYLMVAVTATRAFGIGRAVFRYAERLVSHDAVLRMLADLRVSVFRRLERLAPAGLREARRGDLLSRLVADVDALQDYWLRWLLPVGSAVLVGVGAVGFTGWLLPEAGAVLAVGLLAAGVGVPLVSGARARRAERRLAPARGLLATRVAELLEGCAELTVAGALGSRVRAARAADATLTAIAARGATATALGGGLSALICGLTVAAAAYAGVGAVHDGRLPGVALAVVVLTPLAAFEAVAGLPLAVQYRQRAARGAERVWEVLDAPVPVREPERPAAAPATPFPLEVRGLAARYAGQERDALRGVDLTLTAGKRVAVVGPSGAGKTTLAQVLLRFMDAREGGVSLGGTDTAALGGDTVRRFVGLCAQDAHLFDSSVRENLALARKDATEDDLRDALRRARLLDWVDSLPAGLDTLVGEHGARLSGGQRQRLALARALLADFPVLVLDEPAEHLDLATADALTADLLAVTEGRTTLLITHRLQGLDAVDEVIVLDEGQVVQRGPYAELVAVAGPLRTMLERERGPLAPVHQPA

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
3 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
4 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
5 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
6 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
7 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
8 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
9 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
10 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
11 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
12 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
13 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
14 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
15 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
16 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
17 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
18 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
19 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
20 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
21 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
22 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
23 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
24 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
25 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
26 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
27 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
28 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
29 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
30 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
31 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
32 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
33 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
34 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
35 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
36 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
37 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
38 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
39 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
40 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
41 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
42 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
43 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
44 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
45 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
46 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
47 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
48 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
49 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
50 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
51 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
52 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
53 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
54 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
55 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
56 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
57 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
58 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
59 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
60 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
61 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
62 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
63 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
73 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
74 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
75 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
76 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
77 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
78 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
79 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
80 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
81 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
82 2643221548 Streptomyces sp. Root55 Isolate Unclassified
83 2643221578 Streptomyces sp. Root63 Isolate Unclassified
84 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
85 2643221670 Streptomyces sp. Root431 Isolate Unclassified
86 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
87 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
88 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
89 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
90 2643221714 Streptomyces sp. Root264 Isolate Unclassified
91 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
92 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
93 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
94 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
95 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
96 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
97 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
98 2808606448 Streptomyces sp. 193411 Isolate Unclassified
99 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
100 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
101 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
102 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
103 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
104 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
105 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
106 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
107 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
108 2862574272 Streptomyces sp. AcE210 Isolate Nodule
109 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
110 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
111 2867428634 Streptomyces sp. RP5T Isolate Unclassified
112 2867475112 Streptomyces sp. TM32 Isolate Unclassified
113 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
114 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
115 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
116 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
117 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
118 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
119 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
120 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
121 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
122 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
123 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
124 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
125 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
126 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
127 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
128 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
129 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
130 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
131 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
132 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
133 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
134 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
135 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
136 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
137 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
138 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
139 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
140 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
141 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
142 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
143 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
144 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
145 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
146 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
147 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 56.4
Metatranscriptomes 1.16
Isolates 42.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.74
Nodule 1.74
Rhizoplane 0.58
Rhizosphere 70.35
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1128713 3300003578 Bacteria 9450
2 Ga0006562J51391_1128715 3300003578 Bacteria 6370
3 Ga0075363_100003159 3300006048 Bacteria 6931
4 Ga0105246_10000694 3300011119 Bacteria 18971
5 Ga0182008_10002519 3300014497 Bacteria 11416
6 Ga0183367_1008 3300015688 Bacteria 490626
7 Ga0207426_1001179 3300025302 Bacteria 23362
8 Ga0307517_10004229 3300028786 Bacteria 22136
9 Ga0307515_10002535 3300028794 Bacteria 39481
10 Ga0307512_10002787 3300030522 Bacteria 21303
11 Ga0307512_10032067 3300030522 Bacteria 4542
12 Ga0307509_10007593 3300031507 Bacteria 14117
13 Ga0307509_10034323 3300031507 Bacteria 5573
14 Ga0307516_10019811 3300031730 Bacteria 6957
15 Ga0307518_10012053 3300031838 Bacteria 6186
16 Ga0307507_10013803 3300033179 Bacteria 9740
17 Ga0307510_10004078 3300033180 Bacteria 17133
18 Ga0307510_10018938 3300033180 Bacteria 8080
19 Ga0395898_0002856 3300037466 Bacteria 19744
20 Ga0395898_0005655 3300037466 Bacteria 13479
21 Ga0395898_0018629 3300037466 Bacteria 7078
22 Ga0439457_000220 3300042014 Bacteria 15237
23 Ga0450894_000157 3300042131 Bacteria 11985
24 Ga0450898_000294 3300042134 Bacteria 5604
25 Ga0450903_000306 3300042138 Bacteria 10804
26 Ga0450906_000071 3300042145 Bacteria 16241
27 Ga0466969_0003006 3300044656 Bacteria 8984
28 Ga0466972_0007983 3300044658 Bacteria 5306
29 Ga0466966_0011862 3300044684 Bacteria 5772
30 Ga0466963_0004352 3300044694 Bacteria 8221
31 Ga0466970_0001249 3300044765 Bacteria 12322
32 Ga0466970_0001480 3300044765 Bacteria 11339
33 Ga0466958_0001539 3300045836 Bacteria 11045
34 Ga0466967_0000917 3300045976 Bacteria 15838
35 Ga0495603_0003559 3300046455 Bacteria 9276
36 Ga0495629_0004761 3300046459 Bacteria 10171
37 Ga0495629_0009635 3300046459 Bacteria 7055
38 Ga0495605_0020781 3300046474 Bacteria 3485
39 Ga0495662_0002268 3300046476 Bacteria 9694
40 Ga0495664_0000206 3300046477 Bacteria 28424
41 Ga0495594_0000748 3300046499 Bacteria 16646
42 Ga0495606_0008761 3300046507 Bacteria 8692
43 Ga0495610_0009483 3300046512 Bacteria 6149
44 Ga0495618_0004488 3300046514 Bacteria 8582
45 Ga0495628_0002817 3300046516 Bacteria 15606
46 Ga0495628_0009739 3300046516 Bacteria 8195
47 Ga0495630_0002609 3300046517 Bacteria 12488
48 Ga0495631_0010718 3300046518 Bacteria 4531
49 Ga0495643_0002191 3300046522 Bacteria 15967
50 Ga0495643_0005085 3300046522 Bacteria 8995
51 Ga0495652_0019142 3300046529 Bacteria 6099
52 Ga0495652_0026229 3300046529 Bacteria 5150
53 Ga0495587_0002754 3300046536 Bacteria 11731
54 Ga0495634_0001617 3300046642 Bacteria 19632
55 Ga0495635_0000427 3300046663 Bacteria 26692
56 Ga0495635_0012927 3300046663 Bacteria 5845
57 Ga0495657_0001293 3300046675 Bacteria 21757
58 Ga0495657_0009338 3300046675 Bacteria 7441
59 Ga0495657_0017957 3300046675 Bacteria 5129
60 Ga0495613_0000629 3300046689 Bacteria 28044
61 Ga0495613_0009508 3300046689 Bacteria 7215
62 Ga0495613_0016153 3300046689 Bacteria 5559
63 Ga0495613_0022366 3300046689 Bacteria 4711
64 Ga0495613_0022373 3300046689 Bacteria 4710
65 Ga0495670_0001986 3300046691 Bacteria 10045
66 Ga0495671_0009837 3300046692 Bacteria 5324
67 Ga0495589_0012159 3300046794 Bacteria 4462
68 Ga0495600_0007382 3300046809 Bacteria 6721
69 Ga0495604_0001487 3300047317 Bacteria 19323
70 Ga0495604_0018791 3300047317 Bacteria 5534
71 Ga0495636_0001385 3300047318 Bacteria 9161
72 Ga0495674_0017999 3300047319 Bacteria 6576
73 Ga0495676_0001354 3300047321 Bacteria 21050
74 Ga0495676_0005128 3300047321 Bacteria 12007
75 Ga0495680_0006426 3300047322 Bacteria 10922
76 Ga0495687_001793 3300047443 Bacteria 18950
77 Ga0495687_001814 3300047443 Bacteria 18789
78 Ga0495675_0001796 3300047444 Bacteria 12784
79 Ga0495685_001260 3300047447 Bacteria 7748
80 Ga0495681_0000624 3300047470 Bacteria 26943
81 Ga0495681_0001025 3300047470 Bacteria 21366
82 Ga0495593_0000665 3300047673 Bacteria 19809
83 Ga0495614_0001095 3300048089 Bacteria 11594
84 Ga0496109_0008940 3300048912 Bacteria 8535
85 Ga0501031_0008110 3300049568 Bacteria 6843
86 Ga0501033_0004536 3300049570 Bacteria 11118
87 Ga0501033_0021663 3300049570 Bacteria 4850
88 Ga0501034_0001636 3300049571 Bacteria 28989
89 Ga0501034_0027428 3300049571 Bacteria 5792
90 Ga0501037_0012374 3300049573 Bacteria 6282
91 Ga0501038_0002128 3300049574 Bacteria 18375
92 Ga0501038_0013950 3300049574 Bacteria 7324
93 Ga0501043_0004184 3300049579 Bacteria 11790
94 Ga0501046_0006797 3300049580 Bacteria 10092
95 Ga0501047_0025052 3300049581 Bacteria 5731
96 Ga0501048_0001897 3300049582 Bacteria 15873
97 Ga0501074_0000828 3300049590 Bacteria 19614
98 Ga0500640_000839 3300053095 Bacteria 8475
99 Ga0466962_0000132 3300061719 Bacteria 30670
100 2912761277 2912757875 Bacteria 7940295
101 2554257548 2554235005 Bacteria 6457341
102 2585298506 2582581312 Bacteria 7308206
103 2585310835 2582581313 Bacteria 10042643
104 2585314524 2582581314 Bacteria 11452267
105 2616700327 2616644814 Bacteria 11555299
106 2616904855 2616644941 Bacteria 8510691
107 2643763114 2643221548 Bacteria 8053412
108 2643900126 2643221578 Bacteria 9213798
109 2643947880 2643221587 Bacteria 7586415
110 2644390683 2643221670 Bacteria 6497041
111 2644405650 2643221673 Bacteria 9196637
112 2644433746 2643221677 Bacteria 7584031
113 2644443115 2643221678 Bacteria 9540101
114 2644464016 2643221682 Bacteria 6743283
115 2644627077 2643221714 Bacteria 9015452
116 2784589002 2784132148 Bacteria 8627943
117 2785342848 2784746763 Bacteria 9783172
118 2785369955 2784746768 Bacteria 10036182
119 2786671028 2786546132 Bacteria 10419719
120 2804846383 2802429296 Bacteria 7227771
121 2808842446 2808606359 Bacteria 9866990
122 2808920959 2808606375 Bacteria 9466072
123 2809232603 2808606448 Bacteria 8656184
124 2811845773 2808606982 Bacteria 7791042
125 2812357652 2811994879 Bacteria 9313447
126 2812480172 2811994917 Bacteria 7761064
127 2819697283 2818991463 Bacteria 7948711
128 2819741444 2818991472 Bacteria 10089953
129 2852637269 2852635781 Bacteria 8251373
130 2862286052 2862281513 Bacteria 9621493
131 2862291356 2862290372 Bacteria 7471434
132 2862390488 2862382967 Bacteria 10317375
133 2862578864 2862574272 Bacteria 10567477
134 2863412735 2863404153 Bacteria 9672205
135 2867350502 2867346516 Bacteria 7608576
136 2867434822 2867428634 Bacteria 9590268
137 2867480914 2867475112 Bacteria 6909112
138 2877680674 2877676314 Bacteria 9512378
139 2912731399 2912723979 Bacteria 8557534
140 2918505175 2918501144 Bacteria 8668083
141 2919471889 2919468124 Bacteria 9133025
142 2946049507 2946045630 Bacteria 8527308
143 2946068204 2946064051 Bacteria 8957905
144 2946076338 2946072368 Bacteria 8999607
145 2947228718 2947224130 Bacteria 9938529
146 2954006801 2954002825 Bacteria 9173742
147 2954385802 2954380949 Bacteria 10050426
148 2954677355 2954673503 Bacteria 9685905
149 2954686797 2954682443 Bacteria 9862841
150 2954696448 2954691527 Bacteria 10720516
151 2954705830 2954701450 Bacteria 10834262
152 2954715803 2954711539 Bacteria 10867210
153 2954725740 2954721474 Bacteria 10456478
154 2954736060 2954731030 Bacteria 10243860
155 2954744696 2954740390 Bacteria 10229294
156 2954754920 2954749733 Bacteria 10366972
157 2954763661 2954759201 Bacteria 9358192
158 2966602083 2966598605 Bacteria 7676064
159 2990049871 2990044586 Bacteria 6603797
160 2990067684 2990059506 Bacteria 9321252
161 2995471646 2995463766 Bacteria 8577691
162 2997459072 2997451912 Bacteria 8492419
163 3006325702 3006321560 Bacteria 8247479
164 3006499382 3006493962 Bacteria 8825450
165 8008566844 8008558824 Bacteria 10610750
166 8008578533 8008574985 Bacteria 7815457
167 8023630489 8023623736 Bacteria 8593882
168 8025419865 8025413630 Bacteria 7014048
169 8025534407 8025530807 Bacteria 8495698
170 8048411502 8048406513 Bacteria 8936924
171 8054167394 8054160619 Bacteria 7783213
172 8056833291 8056829672 Bacteria 9045328
173 Ga0006562J51391_1128713
174 Ga0006562J51391_1128715
175 Ga0075363_100003159
176 Ga0105246_10000694
177 Ga0182008_10002519
178 Ga0183367_1008
179 Ga0207426_1001179
180 Ga0307517_10004229
181 Ga0307515_10002535
182 Ga0307512_10002787
183 Ga0307512_10032067
184 Ga0307509_10007593
185 Ga0307509_10034323
186 Ga0307516_10019811
187 Ga0307518_10012053
188 Ga0307507_10013803
189 Ga0307510_10004078
190 Ga0307510_10018938
191 Ga0395898_0002856
192 Ga0395898_0005655
193 Ga0395898_0018629
194 Ga0439457_000220
195 Ga0450894_000157
196 Ga0450898_000294
197 Ga0450903_000306
198 Ga0450906_000071
199 Ga0466969_0003006
200 Ga0466972_0007983
201 Ga0466966_0011862
202 Ga0466963_0004352
203 Ga0466970_0001249
204 Ga0466970_0001480
205 Ga0466958_0001539
206 Ga0466967_0000917
207 Ga0495603_0003559
208 Ga0495629_0004761
209 Ga0495629_0009635
210 Ga0495605_0020781
211 Ga0495662_0002268
212 Ga0495664_0000206
213 Ga0495594_0000748
214 Ga0495606_0008761
215 Ga0495610_0009483
216 Ga0495618_0004488
217 Ga0495628_0002817
218 Ga0495628_0009739
219 Ga0495630_0002609
220 Ga0495631_0010718
221 Ga0495643_0002191
222 Ga0495643_0005085
223 Ga0495652_0019142
224 Ga0495652_0026229
225 Ga0495587_0002754
226 Ga0495634_0001617
227 Ga0495635_0000427
228 Ga0495635_0012927
229 Ga0495657_0001293
230 Ga0495657_0009338
231 Ga0495657_0017957
232 Ga0495613_0000629
233 Ga0495613_0009508
234 Ga0495613_0016153
235 Ga0495613_0022366
236 Ga0495613_0022373
237 Ga0495670_0001986
238 Ga0495671_0009837
239 Ga0495589_0012159
240 Ga0495600_0007382
241 Ga0495604_0001487
242 Ga0495604_0018791
243 Ga0495636_0001385
244 Ga0495674_0017999
245 Ga0495676_0001354
246 Ga0495676_0005128
247 Ga0495680_0006426
248 Ga0495687_001793
249 Ga0495687_001814
250 Ga0495675_0001796
251 Ga0495685_001260
252 Ga0495681_0000624
253 Ga0495681_0001025
254 Ga0495593_0000665
255 Ga0495614_0001095
256 Ga0496109_0008940
257 Ga0501031_0008110
258 Ga0501033_0004536
259 Ga0501033_0021663
260 Ga0501034_0001636
261 Ga0501034_0027428
262 Ga0501037_0012374
263 Ga0501038_0002128
264 Ga0501038_0013950
265 Ga0501043_0004184
266 Ga0501046_0006797
267 Ga0501047_0025052
268 Ga0501048_0001897
269 Ga0501074_0000828
270 Ga0500640_000839
271 Ga0466962_0000132
272 2912761277
273 2554257548
274 2585298506
275 2585310835
276 2585314524
277 2616700327
278 2616904855
279 2643763114
280 2643900126
281 2643947880
282 2644390683
283 2644405650
284 2644433746
285 2644443115
286 2644464016
287 2644627077
288 2784589002
289 2785342848
290 2785369955
291 2786671028
292 2804846383
293 2808842446
294 2808920959
295 2809232603
296 2811845773
297 2812357652
298 2812480172
299 2819697283
300 2819741444
301 2852637269
302 2862286052
303 2862291356
304 2862390488
305 2862578864
306 2863412735
307 2867350502
308 2867434822
309 2867480914
310 2877680674
311 2912731399
312 2918505175
313 2919471889
314 2946049507
315 2946068204
316 2946076338
317 2947228718
318 2954006801
319 2954385802
320 2954677355
321 2954686797
322 2954696448
323 2954705830
324 2954715803
325 2954725740
326 2954736060
327 2954744696
328 2954754920
329 2954763661
330 2966602083
331 2990049871
332 2990067684
333 2995471646
334 2997459072
335 3006325702
336 3006499382
337 8008566844
338 8008578533
339 8023630489
340 8025419865
341 8025534407
342 8048411502
343 8054167394
344 8056833291

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

15

283

0.93

PF00005

ABC_tran

ABC transporter

1035

1184

0.92

PF00005

ABC_tran

ABC transporter

360

509

0.87

PF00664

ABC_membrane

ABC transporter transmembrane region

700

968

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ghi-assembly1.cif.gz_A crystal structure of plasmodium yoelii multidrug resistance protein 2 0.9279 871 1108
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9134 871 1105
5eum-assembly1.cif.gz_B 1.8 angstrom crystal structure of atp-binding component of fused lipid transporter subunits of abc superfamily from haemophilus influenzae. 0.9058 859 1106
3vx4-assembly1.cif.gz_A crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway 0.9042 865 1103
5eum-assembly1.cif.gz_A 1.8 angstrom crystal structure of atp-binding component of fused lipid transporter subunits of abc superfamily from haemophilus influenzae. 0.9014 859 1106
ID Description Score Start End Superfamily
af_A0A1D6Q2V7_231_304_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9335 338 405 3.40.50.300
af_O53645_329_572_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9294 871 1103 3.40.50.300
af_Q19015_1020_1270_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9277 893 1108 3.40.50.300
af_A0A1D6P1I8_181_285_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9256 338 420 3.40.50.300
af_Q19015_398_655_1.20.1560.10 Mainly Alpha;Up-down Bundle;ABC transporter transmembrane region fold;ABC transporter type 1, transmembrane domain 0.9222 898 1111 1.20.1560.10
ID Description Score Start End GO Terms
AF-A0A0L8QTM6-F1-model_v4 deleted 0.9285 311 479
AF-A0A7X2MGV2-F1-model_v4 ATP-binding cassette domain-containing protein 0.9263 868 1109 GO:0005524
GO:0015421
GO:0016887
AF-A0A7X2MGV2-F1-model_v4 ATP-binding cassette domain-containing protein 0.9191 868 1109 GO:0005524
GO:0015421
GO:0016887
AF-A0A7K2KR16-F1-model_v4 ATP-binding cassette domain-containing protein 0.9173 872 1115 GO:0005524
GO:0016887
GO:0034040
AF-A0A7Z1XTE6-F1-model_v4 deleted 0.9163 135 535

Map