F261626

General Info

Members Datasets Scaffolds Average Seq Length
172 156 110 598

Family's Representative Sequence

Representative Sequence 3300053151|Ga0500604_0003659|Ga0500604_0003659_874_2865
Length 663
Sequence MVLNARSHERIVLPPATSVSDCAKPRRQHLFPFSARLCGIRLVDRVVAASCSLDAIEKGIEVKLTVLIALMVVNGLTSAHAQTKQEATGADLIVHNAKIYTGNAAQPEASAVAVKGGRIYSVGTDAEVLALKKTNTRVIDSRGRRLIPGIIDAHTHVLNEGGYNYTLRWDGVPTLRRALAMLSEQARRTPEGQWVKVIGGWSPYQFEENRFPTMDELRKAVPNRPLIVQYAYNRAFLNQQAMDAFGVGTDKFPQLPGTELEKDAQGRYTGVVHGYTFTFIAMETMVPQLSFDEEVSSLVQTIHSLNRVGITSVIDAGTGFRGYPKAVPTVDALARDNRLNIRMPFMDIQFGEGADFNVVDAQITAITKTAPISPGHNLHPHLAHGHAYQGAGELLSVEVHDHENFDRPAVIVQPDKMRELVERDISKLVQRRIPFREHITYDENITPFLDALEKLNEKMPLDGLRWSLEHAETISPANIARVKVLGGGIALDTKMALHGDSFIKTHGRDKALLTPRLRQLVDSGIPLAMTTDAFRASSFNPWIGISWMVSGKSVSGTEVLAKDNRLSRAEALGLFTRKAAWFMNTESEMGMIAPGHLADFALLDRDYFSIAEAQIKSISSVLTVMDGRVVYGAQDYQSLSPVLPEILPAWSPIKHFGGYYQAR

Samples

Sample ID Description Type Environment
1 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
2 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
3 2513237084 Rhizobium leguminosarum bv. viciae UPM1131 Isolate Nodule
4 2513237085 Rhizobium leguminosarum bv. viciae UPM1137 Isolate Nodule
5 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
6 2513237162 Rhizobium ruizarguesonis GB30 Isolate Nodule
7 2515075009 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
8 2515154116 Rhizobium ruizarguesonis Ps8 Isolate Nodule
9 2515154134 Rhizobium gallicum bv. gallicum R602sp Isolate Nodule
10 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
11 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
12 2585427526 Rhizobium leguminosarum OV152 Isolate Rhizosphere
13 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
14 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
15 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
16 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
17 2588253510 Rhizobacter sp. OV335 Isolate Rhizosphere
18 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
19 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
20 2738541278 Niastella sp. CF465 Isolate Unclassified
21 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
22 2775507049 Rhizobium sp. ACO-34A Isolate Unclassified
23 2816332133 Acidovorax radicis 2721A Isolate Unclassified
24 2831864461 Roseateles noduli HZ7 Isolate Nodule
25 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
26 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
27 2842163707 Rhizobium leguminosarum SEMIA 460 Isolate Nodule
28 2842733646 Variovorax sp. R-72446 Isolate Unclassified
29 2842747753 Variovorax sp. R-72060 Isolate Unclassified
30 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
31 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
32 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
33 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
34 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
35 2857558681 Duganella sp. R-74565 Isolate Unclassified
36 2857564685 Duganella sp. R-74599 Isolate Unclassified
37 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
38 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
39 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
40 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
41 2935675223 Bradyrhizobium sp. LA2.1 Isolate Nodule
42 2935694250 Bradyrhizobium sp. LA6.1 Isolate Nodule
43 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
44 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
45 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
46 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
47 2935901341 Rhizobium leguminosarum SEMIA 4082 Isolate Nodule
48 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
49 2936367885 Rhizobium changzhiense WYCCWR 11290 Isolate Nodule
50 2936375103 Rhizobium changzhiense WYCCWR 11317 Isolate Nodule
51 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
52 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
53 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
54 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
55 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
56 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
57 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
58 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
59 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
60 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
61 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
62 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
63 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
64 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
65 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
66 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
67 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
68 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
69 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
70 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
71 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
72 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
73 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
74 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
75 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
77 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
80 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
81 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
87 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
89 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
90 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
91 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
92 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
93 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
97 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
98 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
99 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
100 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
101 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
102 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
103 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
104 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
105 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
106 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
107 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
110 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
111 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
112 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
113 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
114 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
117 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
118 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
119 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
120 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
121 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
122 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
123 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
124 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
125 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
126 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
127 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
128 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
129 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
130 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
133 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
134 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
135 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
138 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
139 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
140 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
141 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
142 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
143 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
144 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
145 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
146 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
147 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
148 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
149 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
150 8005307578 Rhizobium leguminosarum bv. phaseoli LCS0306 Isolate Unclassified
151 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
152 8005376324 Rhizobium changzhiense WYCCWR 11279 Isolate Nodule
153 8005460587 Rhizobium leguminosarum bv. viciae 248 Isolate Nodule
154 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
155 8024479707 Rhizobium leguminosarum Tri-43 Isolate Nodule
156 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 64.53
Metatranscriptomes 0
Isolates 35.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.93
Nodule 19.19
Rhizoplane 0.58
Rhizosphere 47.67
Stem 0
Stem Tuber 0
Unclassified 11.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10002859 3300003215 Bacteria 9807
2 Ga0055526_1008594 3300003771 Bacteria 5061
3 Ga0055524_1005913 3300003775 Bacteria 5387
4 Ga0055528_1000083 3300003790 Bacteria 74840
5 Ga0065165_1000584 3300005262 Bacteria 53833
6 Ga0070666_10000146 3300005335 Bacteria 48247
7 Ga0070706_100022962 3300005467 Bacteria 5745
8 Ga0070707_100049883 3300005468 Bacteria 4012
9 Ga0070698_100050689 3300005471 Bacteria 4230
10 Ga0070699_100040844 3300005518 Bacteria 4015
11 Ga0070665_100058646 3300005548 Bacteria 3859
12 Ga0068864_100078952 3300005618 Bacteria 2881
13 Ga0068863_100154744 3300005841 Bacteria 2195
14 Ga0075369_10005783 3300006186 Bacteria 4643
15 Ga0075370_10002310 3300006353 Bacteria 8795
16 Ga0099826_10000010 3300006948 Bacteria 314346
17 Ga0099794_10017445 3300007265 Bacteria 3200
18 Ga0105245_10001426 3300009098 Bacteria 21674
19 Ga0114129_10010966 3300009147 Bacteria 12910
20 Ga0114129_10262721 3300009147 Bacteria 2313
21 Ga0105243_10121524 3300009148 Bacteria 2202
22 Ga0157373_10020886 3300013100 Bacteria 4753
23 Ga0209147_100281 3300025229 Bacteria 43878
24 Ga0209673_1000086 3300025273 Bacteria 210101
25 Ga0209676_1000187 3300025292 Bacteria 141338
26 Ga0209564_1004345 3300025295 Bacteria 8727
27 Ga0209758_1000015 3300025297 Bacteria 851943
28 Ga0209758_1000195 3300025297 Bacteria 133982
29 Ga0209758_1005249 3300025297 Bacteria 10141
30 Ga0209256_1000590 3300025299 Bacteria 50529
31 Ga0209256_1013186 3300025299 Bacteria 3087
32 Ga0207680_10000753 3300025903 Bacteria 15266
33 Ga0207647_10001486 3300025904 Bacteria 18007
34 Ga0207684_10140036 3300025910 Bacteria 2079
35 Ga0207687_10002847 3300025927 Bacteria 11749
36 Ga0209371_1002171 3300027312 Bacteria 11475
37 Ga0209282_1000009 3300027666 Bacteria 233366
38 Ga0268266_10065131 3300028379 Bacteria 3150
39 Ga0307515_10000261 3300028794 Bacteria 130891
40 Ga0268256_1000028 3300030500 Bacteria 433179
41 Ga0316176_1020492 3300030732 Bacteria 55335
42 Ga0316183_1062078 3300030742 Bacteria 40689
43 Ga0316181_1054941 3300030744 Bacteria 49722
44 Ga0307407_10000029 3300031903 Bacteria 97930
45 Ga0307416_100000007 3300032002 Bacteria 433284
46 Ga0307414_10010316 3300032004 Bacteria 5413
47 Ga0307414_10092404 3300032004 Bacteria 2252
48 Ga0307411_10074831 3300032005 Unclassified 2310
49 Ga0439436_0001645 3300041404 Bacteria 6524
50 Ga0439447_000614 3300041407 Bacteria 13279
51 Ga0439466_0019785 3300041411 Bacteria 2406
52 Ga0439465_0011427 3300041413 Bacteria 2786
53 Ga0451847_0055142 3300041503 Bacteria 4885
54 Ga0439433_0001217 3300041999 Bacteria 5308
55 Ga0439445_0000353 3300042004 Bacteria 9094
56 Ga0439449_0005270 3300042007 Bacteria 4958
57 Ga0439452_002504 3300042010 Bacteria 6750
58 Ga0439462_0001547 3300042015 Bacteria 5159
59 Ga0439446_0002160 3300042156 Bacteria 4676
60 Ga0495592_0000120 3300046454 Bacteria 69531
61 Ga0495650_0000041 3300046471 Bacteria 363945
62 Ga0495584_0004178 3300046491 Bacteria 7791
63 Ga0495607_0002341 3300046501 Bacteria 15503
64 Ga0495610_0007174 3300046512 Bacteria 7495
65 Ga0495616_0002167 3300046513 Bacteria 13125
66 Ga0495632_0000006 3300046519 Bacteria 345883
67 Ga0495648_0013909 3300046524 Bacteria 5924
68 Ga0495663_0000172 3300046525 Bacteria 26082
69 Ga0495609_0018032 3300046538 Bacteria 3275
70 Ga0495668_0004523 3300046616 Bacteria 9830
71 Ga0495625_0000074 3300046660 Bacteria 164813
72 Ga0495625_0001747 3300046660 Bacteria 25139
73 Ga0495625_0011529 3300046660 Bacteria 7201
74 Ga0495625_0023225 3300046660 Bacteria 4739
75 Ga0495659_0004026 3300046664 Bacteria 4648
76 Ga0495669_0003610 3300046684 Bacteria 6371
77 Ga0495660_0006111 3300046810 Bacteria 7148
78 Ga0495636_0012659 3300047318 Bacteria 3341
79 Ga0495687_009933 3300047443 Bacteria 5265
80 Ga0495677_0005404 3300047445 Bacteria 4843
81 Ga0495685_000939 3300047447 Bacteria 8819
82 Ga0495673_0000096 3300047469 Bacteria 182792
83 Ga0495681_0002210 3300047470 Bacteria 14019
84 Ga0496114_0000796 3300048917 Bacteria 23575
85 Ga0496122_0032250 3300048925 Bacteria 4337
86 Ga0496124_0000188 3300048927 Bacteria 122361
87 Ga0496124_0006327 3300048927 Bacteria 12923
88 Ga0495678_006379 3300049459 Bacteria 6288
89 Ga0501238_000159 3300049671 Bacteria 10482
90 nmdc:mga03n38_4440_c1 3300050490 Bacteria 4650
91 nmdc:mga07m45_1494_c1 3300050496 Bacteria 10735
92 nmdc:mga05p37_176301_c1 3300050507 Bacteria 2604
93 Ga0500578_0000423 3300053086 Bacteria 51601
94 Ga0500643_018307 3300053087 Bacteria 2327
95 Ga0500651_0000012 3300053093 Bacteria 243306
96 Ga0500566_0029946 3300053094 Bacteria 3177
97 Ga0500650_0043062 3300053098 Bacteria 2087
98 Ga0500593_000258 3300053117 Bacteria 21754
99 Ga0500607_001066 3300053121 Bacteria 25835
100 Ga0500628_000407 3300053129 Bacteria 8152
101 Ga0500568_0000931 3300053139 Bacteria 20194
102 Ga0500604_0003659 3300053151 Bacteria 4131
103 Ga0500616_0000016 3300053153 Bacteria 627087
104 Ga0500616_0041892 3300053153 Bacteria 2455
105 Ga0500622_0000004 3300053156 Bacteria 557587
106 Ga0500622_0000008 3300053156 Bacteria 423636
107 Ga0500622_0001793 3300053156 Bacteria 16373
108 Ga0500622_0002446 3300053156 Bacteria 13395
109 Ga0500622_0003557 3300053156 Bacteria 10301
110 Ga0500661_000664 3300055283 Bacteria 6452

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050507 nmdc:mga05p37_176301_c1 nmdc:mga05p37_176301_c1_97_1629 496
2 3300053094 Ga0500566_0029946 Ga0500566_0029946_383_2164 560
3 3300055283 Ga0500661_000664 Ga0500661_000664_1882_3663 560
4 3300053129 Ga0500628_000407 Ga0500628_000407_542_2323 563
5 3300047469 Ga0495673_0000096 Ga0495673_0000096_118746_120560 571
6 3300006948 Ga0099826_10000010 Ga0099826_10000010120 578
7 3300027666 Ga0209282_1000009 Ga0209282_1000009119 578
8 3300041413 Ga0439465_0011427 Ga0439465_0011427_954_2732 582
9 iso_pu_bacteria 2842733646 2842736109 582
10 3300005467 Ga0070706_100022962 Ga0070706_1000229625 584
11 3300005468 Ga0070707_100049883 Ga0070707_1000498835 584
12 3300005471 Ga0070698_100050689 Ga0070698_1000506895 584
13 3300005518 Ga0070699_100040844 Ga0070699_1000408443 584
14 3300009098 Ga0105245_10001426 Ga0105245_1000142616 584
15 3300009147 Ga0114129_10010966 Ga0114129_100109667 584
16 3300009148 Ga0105243_10121524 Ga0105243_101215242 584
17 3300025910 Ga0207684_10140036 Ga0207684_101400362 584
18 3300025927 Ga0207687_10002847 Ga0207687_1000284710 584
19 3300049671 Ga0501238_000159 Ga0501238_000159_3669_5483 584
20 iso_pu_bacteria 2738541278 2738727108 584
21 3300005335 Ga0070666_10000146 Ga0070666_1000014622 589
22 3300025903 Ga0207680_10000753 Ga0207680_1000075317 589
23 3300046524 Ga0495648_0013909 Ga0495648_0013909_1428_3215 589
24 3300053087 Ga0500643_018307 Ga0500643_018307_86_1891 589
25 3300053117 Ga0500593_000258 Ga0500593_000258_11959_13731 589
26 3300053086 Ga0500578_0000423 Ga0500578_0000423_18971_20749 591
27 3300046491 Ga0495584_0004178 Ga0495584_0004178_4374_6155 592
28 3300046501 Ga0495607_0002341 Ga0495607_0002341_8653_10434 592
29 3300046512 Ga0495610_0007174 Ga0495610_0007174_1947_3728 592
30 3300046513 Ga0495616_0002167 Ga0495616_0002167_7618_9399 592
31 3300046616 Ga0495668_0004523 Ga0495668_0004523_4676_6457 592
32 3300046660 Ga0495625_0011529 Ga0495625_0011529_518_2299 592
33 3300046660 Ga0495625_0023225 Ga0495625_0023225_474_2255 592
34 3300046664 Ga0495659_0004026 Ga0495659_0004026_2300_4081 592
35 3300046684 Ga0495669_0003610 Ga0495669_0003610_3198_4979 592
36 3300046810 Ga0495660_0006111 Ga0495660_0006111_2193_3974 592
37 3300047318 Ga0495636_0012659 Ga0495636_0012659_1264_3045 592
38 3300047443 Ga0495687_009933 Ga0495687_009933_569_2350 592
39 3300047445 Ga0495677_0005404 Ga0495677_0005404_1636_3417 592
40 3300047447 Ga0495685_000939 Ga0495685_000939_5775_7556 592
41 3300047470 Ga0495681_0002210 Ga0495681_0002210_4856_6637 592
42 3300048927 Ga0496124_0006327 Ga0496124_0006327_5791_7572 592
43 3300053121 Ga0500607_001066 Ga0500607_001066_9847_11628 592
44 3300053139 Ga0500568_0000931 Ga0500568_0000931_9875_11680 592
45 3300053153 Ga0500616_0041892 Ga0500616_0041892_528_2309 592
46 iso_pu_bacteria 2585428187 2588235020 592
47 3300048917 Ga0496114_0000796 Ga0496114_0000796_13401_15182 593
48 iso_pu_bacteria 2831864461 2831867684 593
49 iso_pu_bacteria 2643221581 2643913889 595
50 iso_pu_bacteria 2643221725 2644686024 596
51 iso_pu_bacteria 2842903701 2842903728 596
52 iso_pu_bacteria 2919692658 2919692925 596
53 3300007265 Ga0099794_10017445 Ga0099794_100174452 597
54 3300028794 Ga0307515_10000261 Ga0307515_1000026191 597
55 iso_pu_bacteria 2510461076 2510899936 597
56 iso_pu_bacteria 2510461076 2510900532 597
57 iso_pu_bacteria 2510917030 2511199931 597
58 iso_pu_bacteria 2513237084 2513573476 597
59 iso_pu_bacteria 2513237085 2513574266 597
60 iso_pu_bacteria 2513237093 2513630922 597
61 iso_pu_bacteria 2513237162 2514021395 597
62 iso_pu_bacteria 2515075009 2515110842 597
63 iso_pu_bacteria 2515154116 2515658040 597
64 iso_pu_bacteria 2515154134 2515737773 597
65 iso_pu_bacteria 2516653077 2517039519 597
66 iso_pu_bacteria 2585427526 2585525923 597
67 iso_pu_bacteria 2585427531 2585564301 597
68 iso_pu_bacteria 2585427609 2585903217 597
69 iso_pu_bacteria 2585428125 2587978645 597
70 iso_pu_bacteria 2588253510 2588295504 597
71 iso_pu_bacteria 2775507049 2776910983 597
72 iso_pu_bacteria 2838661181 2838667412 597
73 iso_pu_bacteria 2842163707 2842163713 597
74 iso_pu_bacteria 2842747753 2842750625 597
75 iso_pu_bacteria 2842922631 2842927947 597
76 iso_pu_bacteria 2852653556 2852653741 597
77 iso_pu_bacteria 2857509624 2857515344 597
78 iso_pu_bacteria 2857558681 2857560677 597
79 iso_pu_bacteria 2857564685 2857568197 597
80 iso_pu_bacteria 2903768456 2903770682 597
81 iso_pu_bacteria 2919100787 2919102242 597
82 iso_pu_bacteria 2935675223 2935677363 597
83 iso_pu_bacteria 2935694250 2935699124 597
84 iso_pu_bacteria 2935769743 2935776706 597
85 iso_pu_bacteria 2935785616 2935792604 597
86 iso_pu_bacteria 2935793552 2935800600 597
87 iso_pu_bacteria 2935810662 2935816366 597
88 iso_pu_bacteria 2935901341 2935902814 597
89 iso_pu_bacteria 2936037263 2936042681 597
90 iso_pu_bacteria 2936367885 2936368549 597
91 iso_pu_bacteria 3005416602 3005416704 597
92 iso_pu_bacteria 8005307578 8005307584 597
93 iso_pu_bacteria 8005314921 8005320653 597
94 iso_pu_bacteria 8005376324 8005377052 597
95 iso_pu_bacteria 8005460587 8005461480 597
96 iso_pu_bacteria 8005556819 8005562721 597
97 3300053098 Ga0500650_0043062 Ga0500650_0043062_103_1959 598
98 3300053156 Ga0500622_0001793 Ga0500622_0001793_6243_8042 598
99 3300006353 Ga0075370_10002310 Ga0075370_100023102 599
100 3300050490 nmdc:mga03n38_4440_c1 nmdc:mga03n38_4440_c1_1339_3138 599
101 3300050496 nmdc:mga07m45_1494_c1 nmdc:mga07m45_1494_c1_2790_4589 599
102 iso_pu_bacteria 2816332133 2816471233 599
103 iso_pu_bacteria 2945945610 2945950080 599
104 iso_pu_bacteria 2945984333 2945985764 599
105 3300005262 Ga0065165_1000584 Ga0065165_100058444 600
106 3300005618 Ga0068864_100078952 Ga0068864_1000789522 600
107 3300005841 Ga0068863_100154744 Ga0068863_1001547442 600
108 3300009147 Ga0114129_10262721 Ga0114129_102627212 600
109 3300013100 Ga0157373_10020886 Ga0157373_100208862 600
110 3300025292 Ga0209676_1000187 Ga0209676_100018770 600
111 3300030732 Ga0316176_1020492 Ga0316176_102049223 600
112 3300030742 Ga0316183_1062078 Ga0316183_106207820 600
113 3300030744 Ga0316181_1054941 Ga0316181_105494128 600
114 3300031903 Ga0307407_10000029 Ga0307407_1000002948 600
115 3300032002 Ga0307416_100000007 Ga0307416_100000007331 600
116 3300032004 Ga0307414_10010316 Ga0307414_100103165 600
117 3300032004 Ga0307414_10092404 Ga0307414_100924041 600
118 3300032005 Ga0307411_10074831 Ga0307411_100748312 600
119 3300041407 Ga0439447_000614 Ga0439447_000614_10996_12801 600
120 3300041407 Ga0439447_000614 Ga0439447_000614_5930_7732 600
121 3300046454 Ga0495592_0000120 Ga0495592_0000120_64375_66177 600
122 3300046538 Ga0495609_0018032 Ga0495609_0018032_1269_3074 600
123 3300046660 Ga0495625_0001747 Ga0495625_0001747_5339_7144 600
124 3300048925 Ga0496122_0032250 Ga0496122_0032250_1795_3597 600
125 3300048927 Ga0496124_0000188 Ga0496124_0000188_76915_78717 600
126 3300049459 Ga0495678_006379 Ga0495678_006379_3245_5050 600
127 3300053156 Ga0500622_0000004 Ga0500622_0000004_120882_122684 600
128 3300053156 Ga0500622_0000008 Ga0500622_0000008_290102_291904 600
129 3300053156 Ga0500622_0003557 Ga0500622_0003557_4029_5834 600
130 3300003215 JGI25153J46596_10002859 JGI25153J46596_100028595 601
131 3300003771 Ga0055526_1008594 Ga0055526_10085944 601
132 3300003775 Ga0055524_1005913 Ga0055524_10059132 601
133 3300003790 Ga0055528_1000083 Ga0055528_100008384 601
134 3300005548 Ga0070665_100058646 Ga0070665_1000586462 601
135 3300006186 Ga0075369_10005783 Ga0075369_100057833 601
136 3300025229 Ga0209147_100281 Ga0209147_10028137 601
137 3300025273 Ga0209673_1000086 Ga0209673_1000086132 601
138 3300025295 Ga0209564_1004345 Ga0209564_10043458 601
139 3300025297 Ga0209758_1000015 Ga0209758_1000015501 601
140 3300025297 Ga0209758_1000195 Ga0209758_100019574 601
141 3300025297 Ga0209758_1005249 Ga0209758_10052495 601
142 3300025299 Ga0209256_1000590 Ga0209256_100059038 601
143 3300025299 Ga0209256_1013186 Ga0209256_10131862 601
144 3300025904 Ga0207647_10001486 Ga0207647_100014866 601
145 3300027312 Ga0209371_1002171 Ga0209371_10021717 601
146 3300028379 Ga0268266_10065131 Ga0268266_100651312 601
147 3300030500 Ga0268256_1000028 Ga0268256_1000028384 601
148 3300041404 Ga0439436_0001645 Ga0439436_0001645_2425_4239 601
149 3300041411 Ga0439466_0019785 Ga0439466_0019785_232_2046 601
150 3300041503 Ga0451847_0055142 Ga0451847_0055142_2820_4664 601
151 3300041999 Ga0439433_0001217 Ga0439433_0001217_3413_5227 601
152 3300042004 Ga0439445_0000353 Ga0439445_0000353_5183_6997 601
153 3300042007 Ga0439449_0005270 Ga0439449_0005270_1393_3207 601
154 3300042010 Ga0439452_002504 Ga0439452_002504_2178_3992 601
155 3300042015 Ga0439462_0001547 Ga0439462_0001547_1804_3618 601
156 3300042156 Ga0439446_0002160 Ga0439446_0002160_2474_4288 601
157 3300046471 Ga0495650_0000041 Ga0495650_0000041_179758_181563 601
158 3300046519 Ga0495632_0000006 Ga0495632_0000006_97663_99468 601
159 3300046525 Ga0495663_0000172 Ga0495663_0000172_853_2658 601
160 3300046660 Ga0495625_0000074 Ga0495625_0000074_72454_74259 601
161 3300053093 Ga0500651_0000012 Ga0500651_0000012_208622_210427 601
162 3300053151 Ga0500604_0003659 Ga0500604_0003659_874_2865 601
163 3300053153 Ga0500616_0000016 Ga0500616_0000016_536291_538096 601
164 3300053156 Ga0500622_0002446 Ga0500622_0002446_176_1990 601
165 iso_pu_bacteria 2582581316 2585336638 601
166 iso_pu_bacteria 2765235942 2766064701 601
167 iso_pu_bacteria 2842110456 2842113704 601
168 iso_pu_bacteria 2857516855 2857522804 601
169 iso_pu_bacteria 2933586486 2933589658 601
170 iso_pu_bacteria 2936375103 2936377645 601
171 iso_pu_bacteria 8024479707 8024480672 601
172 iso_pu_bacteria 8057874678 8057881565 601

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07969

Amidohydro_3

Amidohydrolase family

137

631

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ggm-assembly1.cif.gz_B crystal structure of bt9727_2919 from bacillus thuringiensis subsp. northeast structural genomics target bur228b 0.8833 28 95
3ggm-assembly1.cif.gz_B crystal structure of bt9727_2919 from bacillus thuringiensis subsp. northeast structural genomics target bur228b 0.7953 28 95
6nbo-assembly1.cif.gz_A crystal structure of n-isopropylammelide isopropylaminohydrolase from burkholderia multivorans atcc 17616 0.7113 31 570
3igh-assembly1.cif.gz_X-2 crystal structure of an uncharacterized metal-dependent hydrolase from pyrococcus horikoshii ot3 0.7099 31 553
3icj-assembly1.cif.gz_A crystal structure of an uncharacterized metal-dependent hydrolase from pyrococcus furiosus 0.7093 31 546
ID Description Score Start End Superfamily
3ggmC00 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.9107 28 95 2.30.40.10
3etkA01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.8679 31 87 2.30.40.10
3ggmC00 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.8188 28 95 2.30.40.10
6gddA01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.7986 31 87 2.30.40.10
2puzB01 Mainly Beta;Roll;Urease, subunit C; domain 1;Urease, subunit C, domain 1 0.7981 31 87 2.30.40.10
ID Description Score Start End GO Terms
AF-A0A3M9YZ85-F1-model_v4 Amidohydrolase 0.9792 402 581 GO:0016810
AF-A0A7W4SVK1-F1-model_v4 deleted 0.9775 338 573
AF-A0A3M9YZ85-F1-model_v4 Amidohydrolase 0.9738 402 581 GO:0016810
AF-A0A244DYS9-F1-model_v4 deleted 0.9729 365 540
AF-W0A765-F1-model_v4 Amidohydrolase 3 domain-containing protein 0.9708 23 601 GO:0016810

Feature Viewer

pLDDT pTM Quality
82.56 0.86 High
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Predicted Structure (AlphaFold2)

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