F261238

General Info

Members Datasets Scaffolds Average Seq Length
172 126 344 708

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0038561|Ga0453684_0038561_4019_6226
Length 735
Sequence MVPTETTTLSTTDRVPAAAAPRFFVVETAGGVATLLVDDPGERVNTIHPALMLELVGHLDRLEGDPAVKALVLASGKPDSFVAGAKIELMQGVREAAEAEKLARDGQAVFDRLERFPKPVVAAIHGACLGGGCEWVLACHWRVATDDPRTALGQPEVQLGLIPGGGGTQRLPRLIGVQAALDLILAGKTVKARKAAKLGLVDEVVPAPSLLAIARDRALALAAGKLRREPRRPKGALAALTAFALEDNLLGREVLFRQARKLTLARTGGHYPAPLAALDAVAHGLKHGQAAGLAREARHFGELSVSPVARRLMEIFFATTALKKDNGTGDPAVKARPVERVGVLGGGLMGSGIAYVTVNAGVPVRLREKDDAAGGRALGAVRHVLDERVRRRSIDRLERGEKLRLLTTTTDWSGFQDVDVLVEAVFEDLALKQEMVRAFEAVNARGIFASNTSSIPIGKIAEASRRPEAVLGMHYFSPVHKMPLLEVITTAATSKEAIATAVALGKRQGKTVIVVGDGPGFYTSRILAPYLNEAAHLLAEGAAVDAVDRALTDFGFPVGPLRLLDEVGIDVGEKVAKILHAAFGARMAPPEALHAISGAGRLGRKNGKGLYAYAGQRHGKDKRVDPTVYDLLPGGRVRRPVDAGDVQERVVIQLVNEAIRCLGEGILRSPRDGDVGAVFGLGFPPFLGGPFRWADTLGARALLAKVEALSARHGERFEPAPLLVELGRADRRFHP

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
80 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
81 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
82 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
83 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
84 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
85 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
86 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
87 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
88 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
95 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
104 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
105 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
106 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
107 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
108 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
120 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
121 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.42
Metatranscriptomes 0.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.16
Rhizosphere 96.51
Stem 0
Stem Tuber 0
Unclassified 0.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0038561 3300044712 Bacteria 6528
2 Ga0070658_10001473 3300005327 Bacteria 20012
3 Ga0070658_10010803 3300005327 Bacteria 7319
4 Ga0070676_10016957 3300005328 Bacteria 4027
5 Ga0070683_100000045 3300005329 Bacteria 97310
6 Ga0070683_100029862 3300005329 Bacteria 4942
7 Ga0070670_100000341 3300005331 Bacteria 39086
8 Ga0070680_100000029 3300005336 Bacteria 74849
9 Ga0068868_100000018 3300005338 Bacteria 94882
10 Ga0070689_100021897 3300005340 Bacteria 4764
11 Ga0070692_10019488 3300005345 Bacteria 3274
12 Ga0070669_100007096 3300005353 Bacteria 8048
13 Ga0070675_100010448 3300005354 Bacteria 7252
14 Ga0070671_100032778 3300005355 Bacteria 4293
15 Ga0070688_100008768 3300005365 Bacteria 5503
16 Ga0070659_100041572 3300005366 Bacteria 3594
17 Ga0070667_100017959 3300005367 Bacteria 5864
18 Ga0070703_10004009 3300005406 Bacteria 4162
19 Ga0070709_10003655 3300005434 Bacteria 8255
20 Ga0070714_100004158 3300005435 Bacteria 10882
21 Ga0070714_100004610 3300005435 Bacteria 10394
22 Ga0070714_100011954 3300005435 Bacteria 6905
23 Ga0070701_10005311 3300005438 Bacteria 5307
24 Ga0070705_100011521 3300005440 Bacteria 4463
25 Ga0070685_10019443 3300005466 Bacteria 3664
26 Ga0070698_100065484 3300005471 Bacteria 3659
27 Ga0070699_100034230 3300005518 Bacteria 4391
28 Ga0070679_100003800 3300005530 Bacteria 13856
29 Ga0070684_100000169 3300005535 Bacteria 44981
30 Ga0070672_100010761 3300005543 Bacteria 6357
31 Ga0070686_100024441 3300005544 Bacteria 3621
32 Ga0070695_100012226 3300005545 Bacteria 5148
33 Ga0070704_100021685 3300005549 Bacteria 4169
34 Ga0068855_100053077 3300005563 Bacteria 4770
35 Ga0070664_100013312 3300005564 Bacteria 6698
36 Ga0070664_100061396 3300005564 Bacteria 3203
37 Ga0068859_100009419 3300005617 Bacteria 9866
38 Ga0068864_100070797 3300005618 Bacteria 3035
39 Ga0068863_100095209 3300005841 Unclassified 2826
40 Ga0081539_10000117 3300005985 Bacteria 185868
41 Ga0075430_100001641 3300006846 Bacteria 18285
42 Ga0075430_100009813 3300006846 Bacteria 8099
43 Ga0075430_100077102 3300006846 Bacteria 2793
44 Ga0075431_100136134 3300006847 Bacteria 2532
45 Ga0075434_100058378 3300006871 Bacteria 3835
46 Ga0097620_100009419 3300006931 Bacteria 9866
47 Ga0105245_10000004 3300009098 Bacteria 470684
48 Ga0114129_10002595 3300009147 Bacteria 25118
49 Ga0114129_10010299 3300009147 Bacteria 13340
50 Ga0114129_10109600 3300009147 Bacteria 3811
51 Ga0105243_10075305 3300009148 Bacteria 2739
52 Ga0105248_10010437 3300009177 Bacteria 10231
53 Ga0105248_10067600 3300009177 Bacteria 4012
54 Ga0105237_10009918 3300009545 Bacteria 10162
55 Ga0105238_10000001 3300009551 Bacteria 2036163
56 Ga0157369_10001645 3300013105 Bacteria 27270
57 Ga0157374_10000022 3300013296 Bacteria 270307
58 Ga0157372_10011033 3300013307 Bacteria 9617
59 Ga0157375_10000329 3300013308 Bacteria 42630
60 Ga0157375_10021395 3300013308 Bacteria 5929
61 Ga0157375_10039205 3300013308 Bacteria 4558
62 Ga0157377_10000009 3300014745 Bacteria 385287
63 Ga0157377_10000054 3300014745 Bacteria 88308
64 Ga0157377_10008659 3300014745 Bacteria 4968
65 Ga0157376_10000024 3300014969 Bacteria 220018
66 Ga0213876_10000375 3300021384 Bacteria 38082
67 Ga0213876_10007146 3300021384 Bacteria 6085
68 Ga0207645_10008124 3300025907 Bacteria 7354
69 Ga0207645_10018407 3300025907 Bacteria 4595
70 Ga0207643_10001593 3300025908 Bacteria 12824
71 Ga0207660_10000129 3300025917 Bacteria 44676
72 Ga0207662_10005528 3300025918 Bacteria 6749
73 Ga0207657_10005960 3300025919 Bacteria 12681
74 Ga0207657_10047972 3300025919 Bacteria 3730
75 Ga0207652_10004436 3300025921 Bacteria 11437
76 Ga0207681_10003037 3300025923 Bacteria 10552
77 Ga0207694_10000001 3300025924 Bacteria 4078485
78 Ga0207650_10000060 3300025925 Bacteria 150844
79 Ga0207659_10002217 3300025926 Bacteria 11564
80 Ga0207687_10000003 3300025927 Bacteria 875159
81 Ga0207644_10022714 3300025931 Bacteria 4288
82 Ga0207690_10003537 3300025932 Bacteria 9310
83 Ga0207690_10003913 3300025932 Bacteria 8803
84 Ga0207691_10014187 3300025940 Bacteria 7603
85 Ga0207711_10056651 3300025941 Bacteria 3368
86 Ga0207689_10018601 3300025942 Bacteria 5861
87 Ga0207689_10023570 3300025942 Bacteria 5163
88 Ga0207661_10000007 3300025944 Bacteria 471636
89 Ga0207661_10007259 3300025944 Bacteria 7882
90 Ga0207661_10045651 3300025944 Bacteria 3469
91 Ga0207651_10038775 3300025960 Bacteria 3134
92 Ga0207668_10005923 3300025972 Bacteria 7204
93 Ga0207677_10000433 3300026023 Bacteria 28244
94 Ga0207703_10058122 3300026035 Bacteria 3156
95 Ga0207641_10007887 3300026088 Bacteria 8829
96 Ga0207674_10003188 3300026116 Bacteria 20190
97 Ga0207674_10006575 3300026116 Bacteria 13663
98 Ga0209966_1001435 3300027695 Bacteria 4137
99 Ga0209998_10000207 3300027717 Bacteria 20463
100 Ga0268265_10013433 3300028380 Bacteria 5564
101 Ga0265338_10006714 3300028800 Bacteria 14537
102 Ga0316576_10000707 3300031727 Bacteria 16425
103 Ga0316576_10033729 3300031727 Bacteria 3646
104 Ga0316578_10026335 3300031728 Bacteria 3279
105 Ga0307405_10012671 3300031731 Bacteria 4474
106 Ga0307405_10044985 3300031731 Bacteria 2702
107 Ga0316577_10003942 3300031733 Bacteria 7583
108 Ga0316577_10012288 3300031733 Bacteria 4664
109 Ga0307413_10028704 3300031824 Bacteria 3103
110 Ga0307410_10000190 3300031852 Bacteria 22747
111 Ga0307410_10010162 3300031852 Bacteria 5320
112 Ga0307406_10008057 3300031901 Bacteria 5868
113 Ga0307406_10009619 3300031901 Bacteria 5433
114 Ga0307407_10003937 3300031903 Bacteria 6198
115 Ga0307407_10004723 3300031903 Bacteria 5822
116 Ga0307412_10004260 3300031911 Bacteria 7976
117 Ga0307409_100002218 3300031995 Bacteria 10043
118 Ga0307409_100043020 3300031995 Bacteria 3387
119 Ga0307416_100003674 3300032002 Bacteria 9082
120 Ga0307416_100082583 3300032002 Bacteria 2722
121 Ga0307411_10052081 3300032005 Bacteria 2674
122 Ga0307415_100030384 3300032126 Bacteria 3467
123 Ga0307415_100038649 3300032126 Bacteria 3147
124 Ga0316587_1001624 3300033529 Bacteria 2828
125 Ga0373951_0000018 3300035091 Bacteria 65924
126 Ga0373932_0001126 3300035112 Bacteria 7717
127 Ga0373937_0046715 3300036401 Bacteria 3960
128 Ga0316584_0005555 3300036712 Bacteria 8481
129 Ga0436365_0576559 3300039437 Bacteria 21960
130 Ga0436365_1482009 3300039437 Bacteria 23378
131 Ga0436362_0187530 3300039453 Bacteria 9875
132 Ga0451577_0017218 3300042876 Bacteria 6681
133 Ga0451577_0024770 3300042876 Bacteria 5453
134 Ga0451577_0119074 3300042876 Bacteria 2365
135 Ga0453684_0000332 3300044712 Bacteria 197651
136 Ga0453684_0002057 3300044712 Bacteria 51118
137 Ga0453684_0004769 3300044712 Bacteria 27970
138 Ga0453684_0004999 3300044712 Bacteria 26948
139 Ga0453684_0007904 3300044712 Bacteria 19297
140 Ga0453684_0008110 3300044712 Bacteria 18978
141 Ga0453684_0009153 3300044712 Bacteria 17417
142 Ga0453684_0034445 3300044712 Bacteria 7028
143 Ga0453684_0118321 3300044712 Bacteria 3205
144 Ga0451576_0155254 3300045051 Bacteria 2387
145 Ga0495638_0039799 3300046460 Bacteria 2982
146 Ga0495618_0059898 3300046514 Bacteria 2413
147 Ga0495630_0063143 3300046517 Bacteria 2782
148 Ga0495652_0026643 3300046529 Bacteria 5104
149 Ga0495652_0042928 3300046529 Bacteria 3898
150 Ga0495621_0004658 3300046539 Bacteria 3877
151 Ga0495645_0030083 3300046543 Bacteria 3955
152 Ga0495667_0001678 3300046559 Bacteria 14692
153 Ga0495674_0015788 3300047319 Bacteria 7049
154 Ga0495680_0006364 3300047322 Bacteria 10992
155 Ga0495684_0012654 3300047471 Bacteria 6511
156 Ga0495602_0021065 3300048088 Bacteria 6426
157 Ga0496108_0043295 3300048911 Bacteria 3761
158 Ga0496113_0025757 3300048916 Bacteria 4197
159 Ga0501043_0040624 3300049579 Bacteria 3656
160 Ga0501047_0050236 3300049581 Bacteria 4027
161 Ga0501048_0048806 3300049582 Bacteria 3018
162 Ga0501071_0047393 3300049587 Bacteria 3087
163 Ga0501252_000941 3300049682 Bacteria 2522
164 Ga0501221_001403 3300049704 Bacteria 3975
165 Ga0501234_001522 3300049707 Bacteria 3637
166 Ga0501045_0039038 3300049824 Bacteria 3455
167 nmdc:mga05p37_237378_c1 3300050507 Bacteria 2194
168 nmdc:mga0qj67_10966_c1 3300050509 Bacteria 6783
169 nmdc:mga0qj67_50391_c1 3300050509 Bacteria 3292
170 nmdc:mga0n895_9059_c1 3300050512 Bacteria 8680
171 Ga0501082_0038557 3300060353 Bacteria 4123
172 Ga0501082_0047286 3300060353 Bacteria 3708
173 Ga0453684_0038561
174 Ga0070658_10001473
175 Ga0070658_10010803
176 Ga0070676_10016957
177 Ga0070683_100000045
178 Ga0070683_100029862
179 Ga0070670_100000341
180 Ga0070680_100000029
181 Ga0068868_100000018
182 Ga0070689_100021897
183 Ga0070692_10019488
184 Ga0070669_100007096
185 Ga0070675_100010448
186 Ga0070671_100032778
187 Ga0070688_100008768
188 Ga0070659_100041572
189 Ga0070667_100017959
190 Ga0070703_10004009
191 Ga0070709_10003655
192 Ga0070714_100004158
193 Ga0070714_100004610
194 Ga0070714_100011954
195 Ga0070701_10005311
196 Ga0070705_100011521
197 Ga0070685_10019443
198 Ga0070698_100065484
199 Ga0070699_100034230
200 Ga0070679_100003800
201 Ga0070684_100000169
202 Ga0070672_100010761
203 Ga0070686_100024441
204 Ga0070695_100012226
205 Ga0070704_100021685
206 Ga0068855_100053077
207 Ga0070664_100013312
208 Ga0070664_100061396
209 Ga0068859_100009419
210 Ga0068864_100070797
211 Ga0068863_100095209
212 Ga0081539_10000117
213 Ga0075430_100001641
214 Ga0075430_100009813
215 Ga0075430_100077102
216 Ga0075431_100136134
217 Ga0075434_100058378
218 Ga0097620_100009419
219 Ga0105245_10000004
220 Ga0114129_10002595
221 Ga0114129_10010299
222 Ga0114129_10109600
223 Ga0105243_10075305
224 Ga0105248_10010437
225 Ga0105248_10067600
226 Ga0105237_10009918
227 Ga0105238_10000001
228 Ga0157369_10001645
229 Ga0157374_10000022
230 Ga0157372_10011033
231 Ga0157375_10000329
232 Ga0157375_10021395
233 Ga0157375_10039205
234 Ga0157377_10000009
235 Ga0157377_10000054
236 Ga0157377_10008659
237 Ga0157376_10000024
238 Ga0213876_10000375
239 Ga0213876_10007146
240 Ga0207645_10008124
241 Ga0207645_10018407
242 Ga0207643_10001593
243 Ga0207660_10000129
244 Ga0207662_10005528
245 Ga0207657_10005960
246 Ga0207657_10047972
247 Ga0207652_10004436
248 Ga0207681_10003037
249 Ga0207694_10000001
250 Ga0207650_10000060
251 Ga0207659_10002217
252 Ga0207687_10000003
253 Ga0207644_10022714
254 Ga0207690_10003537
255 Ga0207690_10003913
256 Ga0207691_10014187
257 Ga0207711_10056651
258 Ga0207689_10018601
259 Ga0207689_10023570
260 Ga0207661_10000007
261 Ga0207661_10007259
262 Ga0207661_10045651
263 Ga0207651_10038775
264 Ga0207668_10005923
265 Ga0207677_10000433
266 Ga0207703_10058122
267 Ga0207641_10007887
268 Ga0207674_10003188
269 Ga0207674_10006575
270 Ga0209966_1001435
271 Ga0209998_10000207
272 Ga0268265_10013433
273 Ga0265338_10006714
274 Ga0316576_10000707
275 Ga0316576_10033729
276 Ga0316578_10026335
277 Ga0307405_10012671
278 Ga0307405_10044985
279 Ga0316577_10003942
280 Ga0316577_10012288
281 Ga0307413_10028704
282 Ga0307410_10000190
283 Ga0307410_10010162
284 Ga0307406_10008057
285 Ga0307406_10009619
286 Ga0307407_10003937
287 Ga0307407_10004723
288 Ga0307412_10004260
289 Ga0307409_100002218
290 Ga0307409_100043020
291 Ga0307416_100003674
292 Ga0307416_100082583
293 Ga0307411_10052081
294 Ga0307415_100030384
295 Ga0307415_100038649
296 Ga0316587_1001624
297 Ga0373951_0000018
298 Ga0373932_0001126
299 Ga0373937_0046715
300 Ga0316584_0005555
301 Ga0436365_0576559
302 Ga0436365_1482009
303 Ga0436362_0187530
304 Ga0451577_0017218
305 Ga0451577_0024770
306 Ga0451577_0119074
307 Ga0453684_0000332
308 Ga0453684_0002057
309 Ga0453684_0004769
310 Ga0453684_0004999
311 Ga0453684_0007904
312 Ga0453684_0008110
313 Ga0453684_0009153
314 Ga0453684_0034445
315 Ga0453684_0118321
316 Ga0451576_0155254
317 Ga0495638_0039799
318 Ga0495618_0059898
319 Ga0495630_0063143
320 Ga0495652_0026643
321 Ga0495652_0042928
322 Ga0495621_0004658
323 Ga0495645_0030083
324 Ga0495667_0001678
325 Ga0495674_0015788
326 Ga0495680_0006364
327 Ga0495684_0012654
328 Ga0495602_0021065
329 Ga0496108_0043295
330 Ga0496113_0025757
331 Ga0501043_0040624
332 Ga0501047_0050236
333 Ga0501048_0048806
334 Ga0501071_0047393
335 Ga0501252_000941
336 Ga0501221_001403
337 Ga0501234_001522
338 Ga0501045_0039038
339 nmdc:mga05p37_237378_c1
340 nmdc:mga0qj67_10966_c1
341 nmdc:mga0qj67_50391_c1
342 nmdc:mga0n895_9059_c1
343 Ga0501082_0038557
344 Ga0501082_0047286

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

340

518

0.98

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

520

613

0.98

PF00378

ECH_1

Enoyl-CoA hydratase/isomerase

27

250

0.95

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

644

732

0.91

PF16113

ECH_2

Enoyl-CoA hydratase/isomerase

32

246

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r1n-assembly1.cif.gz_A crystal structure of (s)-3-hydroxybutylryl-coa dehydrogenase form the n-butanol sysnthesizing bacterium, clostridium butyricum. 0.9549 317 585
6dv2-assembly1.cif.gz_H crystal structure of human mitochondrial trifunctional protein 0.9514 5 704
6aa8-assembly1.cif.gz_F crystal structure of (s)-3-hydroxybutyryl-coenzymea dehydrogenase from clostridium acetobutylicum complexed with nad+ 0.9505 318 584
6ysw-assembly2.cif.gz_A e. coli anaerobic trifunctional enzyme subunit-alpha in complex with coenzyme a 0.9503 2 702
6ysw-assembly1.cif.gz_B e. coli anaerobic trifunctional enzyme subunit-alpha in complex with coenzyme a 0.9484 2 705
ID Description Score Start End Superfamily
af_P77399_3_303_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.975 1 307 3.90.226.10
af_A7YT47_359_542_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9702 316 491 3.40.50.720
af_Q9V397_48_369_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9692 5 303 3.90.226.10
af_P77399_3_303_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9686 1 307 3.90.226.10
5z7rC01 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9639 1 204 3.90.226.10
ID Description Score Start End GO Terms
AF-A0A1B6H922-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase NAD binding domain-containing protein 0.9815 4 125 GO:0004300
GO:0006635
GO:0016507
GO:0016509
AF-A0A7S2HKU4-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase NAD binding domain-containing protein 0.9801 397 498 GO:0006635
GO:0016829
GO:0016853
GO:0070403
AF-A0A432Q3N3-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9765 390 706 GO:0004300
GO:0006635
GO:0016509
GO:0070403
AF-A0A0R3QIZ5-F1-model_v4 Enoyl-CoA hydratase 0.9752 34 201 GO:0006635
AF-A0A0L8QFE2-F1-model_v4 deleted 0.9752 379 458

Map