F261171
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 172 | 146 | 165 | 171 |
Family's Representative Sequence
| Representative Sequence | 3300042007|Ga0439449_0029361|Ga0439449_0029361_469_1050 |
| Length | 193 |
| Sequence | VGHFASWRRPTFCILLFLSSITIVLTQTKQPEVWLRGPLAGIPALVQPVAHALLQAQEEIHEMMNDFPMHLLWQRPAGVASPAFHLQHIAGVLNRLFTYAAGEQLTAQQLEYLKAEGVQVDGITITSLMAHLDAQINASIEYLKAVDAARLSEPRGVGRQQLPSTVLGLLFHSAEHTMRHTGQLHVTVRVLIA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2738541278 | Niastella sp. CF465 | Isolate | Unclassified |
| 2 | 2818991442 | Chitinophaga pinensis 1204 | Isolate | Unclassified |
| 3 | 2821136567 | Chitinophaga sancti 1232 | Isolate | Unclassified |
| 4 | 2904467357 | Chitinophaga sancti 3198 | Isolate | Unclassified |
| 5 | 2929239360 | Chitinophaga sp. R-73072 Hybrid assembly | Isolate | Unclassified |
| 6 | 2929921140 | Chitinophaga sp. R-72609 Hybrid assembly | Isolate | Unclassified |
| 7 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 8 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 9 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 10 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 11 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 12 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 13 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 14 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 15 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 16 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 22 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 25 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 26 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 27 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 28 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 29 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 30 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 31 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 32 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300015265 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG | Metagenome | Rhizosphere |
| 45 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 46 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 47 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 48 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 49 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 67 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 68 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 69 | 3300035115 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 | Metagenome | Rhizosphere |
| 70 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 71 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 72 | 3300041505 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG | Metagenome | Unclassified |
| 73 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 74 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 75 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 76 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 77 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 78 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 79 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 80 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 81 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 82 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 83 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 84 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 92 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 93 | 3300049513 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control | Metagenome | Rhizosphere |
| 94 | 3300049519 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought | Metagenome | Rhizosphere |
| 95 | 3300049521 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought | Metagenome | Rhizosphere |
| 96 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 97 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 98 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 99 | 3300049649 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought | Metagenome | Rhizosphere |
| 100 | 3300049651 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought | Metagenome | Rhizosphere |
| 101 | 3300049652 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought | Metagenome | Rhizosphere |
| 102 | 3300049653 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control | Metagenome | Rhizosphere |
| 103 | 3300049655 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought | Metagenome | Rhizosphere |
| 104 | 3300049661 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control | Metagenome | Rhizosphere |
| 105 | 3300049662 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control | Metagenome | Rhizosphere |
| 106 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 107 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 108 | 3300049669 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought | Metagenome | Rhizosphere |
| 109 | 3300049674 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought | Metagenome | Rhizosphere |
| 110 | 3300049680 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought | Metagenome | Rhizosphere |
| 111 | 3300049681 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_B_3_drought | Metagenome | Rhizosphere |
| 112 | 3300049682 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought | Metagenome | Rhizosphere |
| 113 | 3300049688 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought | Metagenome | Rhizosphere |
| 114 | 3300049690 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought | Metagenome | Rhizosphere |
| 115 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 116 | 3300049707 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought | Metagenome | Rhizosphere |
| 117 | 3300049758 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought | Metagenome | Rhizosphere |
| 118 | 3300049763 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control | Metagenome | Rhizosphere |
| 119 | 3300049767 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought | Metagenome | Rhizosphere |
| 120 | 3300049779 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought | Metagenome | Rhizosphere |
| 121 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 124 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 125 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 127 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 128 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 129 | 3300053090 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere | Metagenome | Endosphere |
| 130 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 131 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 132 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 133 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
| 134 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 135 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 136 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 137 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 138 | 3300053144 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere | Metagenome | Endosphere |
| 139 | 3300053146 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere | Metagenome | Endosphere |
| 140 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 141 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 142 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 143 | 3300053160 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere | Metagenome | Endosphere |
| 144 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 145 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 146 | 8003151029 | Chitinophaga sp. GbtcB8 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.93 |
| Metatranscriptomes | 0 |
| Isolates | 4.07 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 20.35 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 63.37 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.28 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25154J39366_1000007 | 3300002738 | Bacteria | 335932 |
| 2 | JGI25157J39369_1002277 | 3300002741 | Bacteria | 5092 |
| 3 | rootH1_10168851 | 3300003316 | Bacteria | 1362 |
| 4 | rootH2_10040284 | 3300003320 | Bacteria | 1168 |
| 5 | rootL2_10050369 | 3300003322 | Bacteria | 1319 |
| 6 | rootL2_10253571 | 3300003322 | Bacteria | 1537 |
| 7 | rootH1_10007189 | 3300003323 | Bacteria | 65578 |
| 8 | rootH1_10031103 | 3300003323 | Bacteria | 5813 |
| 9 | rootH1_10042176 | 3300003323 | Bacteria | 2873 |
| 10 | rootH1_10233642 | 3300003323 | Bacteria | 1958 |
| 11 | JGI25160J50197_1007361 | 3300003354 | Bacteria | 4319 |
| 12 | Ga0055531_10000026 | 3300003794 | Bacteria | 160364 |
| 13 | Ga0065165_1007998 | 3300005262 | Bacteria | 5057 |
| 14 | Ga0070658_10021924 | 3300005327 | Bacteria | 5123 |
| 15 | Ga0070670_101542237 | 3300005331 | Bacteria | 610 |
| 16 | Ga0070669_100361523 | 3300005353 | Unclassified | 1180 |
| 17 | Ga0070667_100039197 | 3300005367 | Bacteria | 3971 |
| 18 | Ga0070662_100259673 | 3300005457 | Bacteria | 1399 |
| 19 | Ga0068867_100537841 | 3300005459 | Bacteria | 1010 |
| 20 | Ga0070699_100351742 | 3300005518 | Bacteria | 1327 |
| 21 | Ga0070704_101459787 | 3300005549 | Unclassified | 628 |
| 22 | Ga0068855_100024230 | 3300005563 | Bacteria | 7265 |
| 23 | Ga0068855_100732984 | 3300005563 | Bacteria | 1055 |
| 24 | Ga0068854_101054477 | 3300005578 | Bacteria | 722 |
| 25 | Ga0068866_10062153 | 3300005718 | Unclassified | 1942 |
| 26 | Ga0068861_100356314 | 3300005719 | Bacteria | 1285 |
| 27 | Ga0068851_10344245 | 3300005834 | Bacteria | 866 |
| 28 | Ga0068860_100012335 | 3300005843 | Bacteria | 8421 |
| 29 | Ga0068860_100040364 | 3300005843 | Bacteria | 4461 |
| 30 | Ga0068860_100911574 | 3300005843 | Bacteria | 895 |
| 31 | Ga0075366_10154119 | 3300006195 | Unclassified | 1392 |
| 32 | Ga0075366_10205344 | 3300006195 | Bacteria | 1199 |
| 33 | Ga0068865_100238791 | 3300006881 | Bacteria | 1429 |
| 34 | Ga0097620_101000173 | 3300006931 | Bacteria | 918 |
| 35 | Ga0105240_10642277 | 3300009093 | Bacteria | 1164 |
| 36 | Ga0114129_10002294 | 3300009147 | Bacteria | 26500 |
| 37 | Ga0105242_10333344 | 3300009176 | Bacteria | 1396 |
| 38 | Ga0105237_10160914 | 3300009545 | Bacteria | 2243 |
| 39 | Ga0105249_10753821 | 3300009553 | Unclassified | 1036 |
| 40 | Ga0105239_10162101 | 3300010375 | Bacteria | 2499 |
| 41 | Ga0157370_10506213 | 3300013104 | Bacteria | 1109 |
| 42 | Ga0157374_10444799 | 3300013296 | Bacteria | 1297 |
| 43 | Ga0157374_10821541 | 3300013296 | Unclassified | 946 |
| 44 | Ga0157378_10201132 | 3300013297 | Bacteria | 1884 |
| 45 | Ga0157372_10034456 | 3300013307 | Bacteria | 5566 |
| 46 | Ga0157372_10454545 | 3300013307 | Bacteria | 1493 |
| 47 | Ga0163163_10337890 | 3300014325 | Unclassified | 1561 |
| 48 | Ga0182005_1000050 | 3300015265 | Bacteria | 121573 |
| 49 | Ga0207425_1040887 | 3300025245 | Bacteria | 883 |
| 50 | Ga0209646_1000002 | 3300025246 | Bacteria | 1425781 |
| 51 | Ga0209026_1000524 | 3300025250 | Bacteria | 27023 |
| 52 | Ga0209129_1024396 | 3300025258 | Bacteria | 1065 |
| 53 | Ga0209758_1019370 | 3300025297 | Bacteria | 3283 |
| 54 | Ga0207426_1000841 | 3300025302 | Bacteria | 32428 |
| 55 | Ga0207426_1032182 | 3300025302 | Bacteria | 1703 |
| 56 | Ga0207426_1052014 | 3300025302 | Bacteria | 1215 |
| 57 | Ga0209257_1000004 | 3300025304 | Bacteria | 1678347 |
| 58 | Ga0207642_10319377 | 3300025899 | Bacteria | 906 |
| 59 | Ga0207705_10000094 | 3300025909 | Bacteria | 107005 |
| 60 | Ga0207705_10093021 | 3300025909 | Bacteria | 2210 |
| 61 | Ga0207707_10258142 | 3300025912 | Bacteria | 1513 |
| 62 | Ga0207695_10133808 | 3300025913 | Bacteria | 2434 |
| 63 | Ga0207671_10462086 | 3300025914 | Bacteria | 1011 |
| 64 | Ga0207657_10157836 | 3300025919 | Bacteria | 1844 |
| 65 | Ga0207650_10907300 | 3300025925 | Bacteria | 748 |
| 66 | Ga0207686_10488249 | 3300025934 | Bacteria | 954 |
| 67 | Ga0207704_10179698 | 3300025938 | Bacteria | 1528 |
| 68 | Ga0207667_10014918 | 3300025949 | Bacteria | 8836 |
| 69 | Ga0207667_10739267 | 3300025949 | Bacteria | 984 |
| 70 | Ga0207658_10545136 | 3300025986 | Bacteria | 1037 |
| 71 | Ga0207648_10075375 | 3300026089 | Bacteria | 2941 |
| 72 | Ga0207648_11153766 | 3300026089 | Bacteria | 727 |
| 73 | Ga0207676_10473758 | 3300026095 | Bacteria | 1184 |
| 74 | Ga0268264_10031299 | 3300028381 | Bacteria | 4363 |
| 75 | Ga0268264_10049332 | 3300028381 | Bacteria | 3502 |
| 76 | Ga0268264_10300474 | 3300028381 | Bacteria | 1511 |
| 77 | Ga0307513_10336680 | 3300031456 | Unclassified | 1261 |
| 78 | Ga0307509_10055492 | 3300031507 | Bacteria | 4210 |
| 79 | Ga0307509_10105523 | 3300031507 | Bacteria | 2838 |
| 80 | Ga0307508_10001720 | 3300031616 | Bacteria | 24290 |
| 81 | Ga0373941_0039567 | 3300035115 | Bacteria | 1450 |
| 82 | Ga0439439_0000752 | 3300041406 | Bacteria | 5823 |
| 83 | Ga0439465_0246898 | 3300041413 | Bacteria | 659 |
| 84 | Ga0451849_1505762 | 3300041505 | Unclassified | 741 |
| 85 | Ga0451853_0400399 | 3300041512 | Unclassified | 700 |
| 86 | Ga0451853_2839415 | 3300041512 | Bacteria | 1748 |
| 87 | Ga0439433_0084630 | 3300041999 | Unclassified | 774 |
| 88 | Ga0439445_0185753 | 3300042004 | Bacteria | 611 |
| 89 | Ga0439449_0015734 | 3300042007 | Bacteria | 2844 |
| 90 | Ga0439449_0029361 | 3300042007 | Bacteria | 2049 |
| 91 | Ga0439457_000240 | 3300042014 | Bacteria | 14794 |
| 92 | Ga0439462_0002465 | 3300042015 | Bacteria | 4303 |
| 93 | Ga0466969_0000305 | 3300044656 | Bacteria | 27063 |
| 94 | Ga0466972_0000082 | 3300044658 | Bacteria | 88592 |
| 95 | Ga0466968_0413311 | 3300044735 | Bacteria | 663 |
| 96 | Ga0466957_0000068 | 3300044842 | Bacteria | 40031 |
| 97 | Ga0466957_0084271 | 3300044842 | Bacteria | 1984 |
| 98 | Ga0466957_0534490 | 3300044842 | Unclassified | 816 |
| 99 | Ga0466959_0000030 | 3300045049 | Bacteria | 111343 |
| 100 | Ga0495627_034467 | 3300046453 | Bacteria | 1581 |
| 101 | Ga0495638_0341508 | 3300046460 | Unclassified | 793 |
| 102 | Ga0495632_0258117 | 3300046519 | Bacteria | 780 |
| 103 | Ga0495633_0000151 | 3300046558 | Bacteria | 91565 |
| 104 | Ga0495668_0002200 | 3300046616 | Bacteria | 16616 |
| 105 | Ga0495625_0311133 | 3300046660 | Unclassified | 1005 |
| 106 | Ga0495660_0443050 | 3300046810 | Bacteria | 562 |
| 107 | Ga0496121_0000010 | 3300048924 | Bacteria | 793488 |
| 108 | Ga0496126_0039337 | 3300048929 | Bacteria | 4389 |
| 109 | Ga0501290_011026 | 3300049513 | Bacteria | 1159 |
| 110 | Ga0501296_003199 | 3300049519 | Bacteria | 1742 |
| 111 | Ga0501298_000044 | 3300049521 | Bacteria | 13011 |
| 112 | Ga0501034_0364025 | 3300049571 | Bacteria | 1373 |
| 113 | Ga0501047_0012287 | 3300049581 | Bacteria | 8104 |
| 114 | Ga0501047_0098612 | 3300049581 | Bacteria | 2800 |
| 115 | Ga0501048_0849177 | 3300049582 | Bacteria | 656 |
| 116 | Ga0501198_008057 | 3300049649 | Bacteria | 1522 |
| 117 | Ga0501201_001284 | 3300049651 | Bacteria | 2360 |
| 118 | Ga0501202_063869 | 3300049652 | Bacteria | 837 |
| 119 | Ga0501206_004568 | 3300049653 | Bacteria | 1763 |
| 120 | Ga0501208_002031 | 3300049655 | Bacteria | 2051 |
| 121 | Ga0501217_000687 | 3300049661 | Bacteria | 5800 |
| 122 | Ga0501222_000944 | 3300049662 | Bacteria | 4167 |
| 123 | Ga0501224_045889 | 3300049664 | Bacteria | 664 |
| 124 | Ga0501233_001019 | 3300049668 | Bacteria | 4763 |
| 125 | Ga0501235_000531 | 3300049669 | Bacteria | 7610 |
| 126 | Ga0501242_004843 | 3300049674 | Bacteria | 1502 |
| 127 | Ga0501250_042672 | 3300049680 | Bacteria | 671 |
| 128 | Ga0501251_012925 | 3300049681 | Bacteria | 1017 |
| 129 | Ga0501252_003117 | 3300049682 | Bacteria | 1691 |
| 130 | Ga0501259_000315 | 3300049688 | Bacteria | 7676 |
| 131 | Ga0501261_000750 | 3300049690 | Bacteria | 4036 |
| 132 | Ga0501225_0018164 | 3300049705 | Bacteria | 1950 |
| 133 | Ga0501234_000610 | 3300049707 | Bacteria | 5483 |
| 134 | Ga0501241_025265 | 3300049758 | Bacteria | 1106 |
| 135 | Ga0501241_077589 | 3300049758 | Unclassified | 687 |
| 136 | Ga0501266_020227 | 3300049763 | Bacteria | 904 |
| 137 | Ga0501270_008618 | 3300049767 | Bacteria | 1296 |
| 138 | Ga0501283_058002 | 3300049779 | Bacteria | 696 |
| 139 | Ga0501035_0387793 | 3300049822 | Bacteria | 1164 |
| 140 | Ga0501044_0009103 | 3300049823 | Bacteria | 10844 |
| 141 | Ga0501045_0250605 | 3300049824 | Bacteria | 1318 |
| 142 | nmdc:mga0k408_147319_c1 | 3300050493 | Bacteria | 1401 |
| 143 | nmdc:mga0k408_69632_c1 | 3300050493 | Bacteria | 2053 |
| 144 | nmdc:mga05p37_7182_c1 | 3300050507 | Bacteria | 13134 |
| 145 | Ga0500635_0001349 | 3300053080 | Bacteria | 5880 |
| 146 | Ga0500578_0000063 | 3300053086 | Bacteria | 117869 |
| 147 | Ga0500644_0000947 | 3300053088 | Bacteria | 9133 |
| 148 | Ga0500646_0048450 | 3300053090 | Bacteria | 1218 |
| 149 | Ga0500651_0135839 | 3300053093 | Bacteria | 1485 |
| 150 | Ga0500569_000356 | 3300053109 | Bacteria | 7385 |
| 151 | Ga0500594_0023689 | 3300053118 | Bacteria | 1559 |
| 152 | Ga0500607_015210 | 3300053121 | Bacteria | 4442 |
| 153 | Ga0500618_095762 | 3300053125 | Unclassified | 668 |
| 154 | Ga0500658_0002923 | 3300053134 | Bacteria | 6557 |
| 155 | Ga0500658_0070885 | 3300053134 | Bacteria | 1470 |
| 156 | Ga0500568_0005562 | 3300053139 | Bacteria | 6490 |
| 157 | Ga0500573_0045409 | 3300053140 | Bacteria | 2533 |
| 158 | Ga0500585_097594 | 3300053144 | Bacteria | 1060 |
| 159 | Ga0500588_0020589 | 3300053146 | Bacteria | 1770 |
| 160 | Ga0500590_152804 | 3300053148 | Unclassified | 1039 |
| 161 | Ga0500616_0077410 | 3300053153 | Bacteria | 1679 |
| 162 | Ga0500622_0000162 | 3300053156 | Bacteria | 70682 |
| 163 | Ga0500633_0011106 | 3300053160 | Bacteria | 2437 |
| 164 | Ga0500636_0011283 | 3300053177 | Bacteria | 5230 |
| 165 | Ga0500645_021995 | 3300053730 | Bacteria | 1965 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | iso_pu_bacteria | 2929239360 | 2929245656 | 160 |
| 2 | 3300044842 | Ga0466957_0084271 | Ga0466957_0084271_371_859 | 162 |
| 3 | 3300046519 | Ga0495632_0258117 | Ga0495632_0258117_150_644 | 162 |
| 4 | 3300046660 | Ga0495625_0311133 | Ga0495625_0311133_71_565 | 162 |
| 5 | 3300046810 | Ga0495660_0443050 | Ga0495660_0443050_42_536 | 162 |
| 6 | 3300053088 | Ga0500644_0000947 | Ga0500644_0000947_1067_1561 | 162 |
| 7 | 3300053109 | Ga0500569_000356 | Ga0500569_000356_5423_5917 | 162 |
| 8 | 3300053121 | Ga0500607_015210 | Ga0500607_015210_2511_3005 | 162 |
| 9 | 3300053134 | Ga0500658_0002923 | Ga0500658_0002923_795_1289 | 162 |
| 10 | 3300053148 | Ga0500590_152804 | Ga0500590_152804_414_908 | 162 |
| 11 | 3300053153 | Ga0500616_0077410 | Ga0500616_0077410_1050_1544 | 162 |
| 12 | 3300053160 | Ga0500633_0011106 | Ga0500633_0011106_1041_1535 | 162 |
| 13 | 3300053177 | Ga0500636_0011283 | Ga0500636_0011283_2884_3378 | 162 |
| 14 | iso_pu_bacteria | 2818991442 | 2819571803 | 163 |
| 15 | iso_pu_bacteria | 2821136567 | 2821141949 | 163 |
| 16 | iso_pu_bacteria | 2904467357 | 2904469637 | 163 |
| 17 | 3300005353 | Ga0070669_100361523 | Ga0070669_1003615232 | 164 |
| 18 | iso_pu_bacteria | 2929921140 | 2929923357 | 164 |
| 19 | iso_pu_bacteria | 8003151029 | 8003152228 | 164 |
| 20 | 3300003794 | Ga0055531_10000026 | Ga0055531_10000026103 | 165 |
| 21 | 3300025304 | Ga0209257_1000004 | Ga0209257_1000004904 | 165 |
| 22 | 3300048929 | Ga0496126_0039337 | Ga0496126_0039337_2807_3304 | 165 |
| 23 | iso_pu_bacteria | 2738541278 | 2738725649 | 165 |
| 24 | 3300003320 | rootH2_10040284 | rootH2_100402842 | 166 |
| 25 | 3300003322 | rootL2_10253571 | rootL2_102535712 | 166 |
| 26 | 3300003323 | rootH1_10042176 | rootH1_100421762 | 166 |
| 27 | 3300041413 | Ga0439465_0246898 | Ga0439465_0246898_126_629 | 166 |
| 28 | 3300046453 | Ga0495627_034467 | Ga0495627_034467_791_1291 | 166 |
| 29 | 3300046558 | Ga0495633_0000151 | Ga0495633_0000151_47763_48263 | 166 |
| 30 | 3300053086 | Ga0500578_0000063 | Ga0500578_0000063_108181_108699 | 166 |
| 31 | 3300053093 | Ga0500651_0135839 | Ga0500651_0135839_906_1406 | 166 |
| 32 | 3300003316 | rootH1_10168851 | rootH1_101688511 | 167 |
| 33 | 3300003323 | rootH1_10233642 | rootH1_102336422 | 167 |
| 34 | 3300005331 | Ga0070670_101542237 | Ga0070670_1015422371 | 167 |
| 35 | 3300005367 | Ga0070667_100039197 | Ga0070667_1000391972 | 167 |
| 36 | 3300005459 | Ga0068867_100537841 | Ga0068867_1005378413 | 167 |
| 37 | 3300005549 | Ga0070704_101459787 | Ga0070704_1014597871 | 167 |
| 38 | 3300005718 | Ga0068866_10062153 | Ga0068866_100621532 | 167 |
| 39 | 3300005719 | Ga0068861_100356314 | Ga0068861_1003563142 | 167 |
| 40 | 3300005834 | Ga0068851_10344245 | Ga0068851_103442451 | 167 |
| 41 | 3300005843 | Ga0068860_100012335 | Ga0068860_1000123352 | 167 |
| 42 | 3300005843 | Ga0068860_100040364 | Ga0068860_1000403642 | 167 |
| 43 | 3300006195 | Ga0075366_10154119 | Ga0075366_101541192 | 167 |
| 44 | 3300006881 | Ga0068865_100238791 | Ga0068865_1002387912 | 167 |
| 45 | 3300009176 | Ga0105242_10333344 | Ga0105242_103333442 | 167 |
| 46 | 3300009553 | Ga0105249_10753821 | Ga0105249_107538212 | 167 |
| 47 | 3300013296 | Ga0157374_10821541 | Ga0157374_108215412 | 167 |
| 48 | 3300013297 | Ga0157378_10201132 | Ga0157378_102011323 | 167 |
| 49 | 3300013307 | Ga0157372_10034456 | Ga0157372_100344562 | 167 |
| 50 | 3300014325 | Ga0163163_10337890 | Ga0163163_103378902 | 167 |
| 51 | 3300015265 | Ga0182005_1000050 | Ga0182005_100005030 | 167 |
| 52 | 3300025302 | Ga0207426_1052014 | Ga0207426_10520142 | 167 |
| 53 | 3300025899 | Ga0207642_10319377 | Ga0207642_103193772 | 167 |
| 54 | 3300025912 | Ga0207707_10258142 | Ga0207707_102581422 | 167 |
| 55 | 3300025925 | Ga0207650_10907300 | Ga0207650_109073002 | 167 |
| 56 | 3300025934 | Ga0207686_10488249 | Ga0207686_104882492 | 167 |
| 57 | 3300025938 | Ga0207704_10179698 | Ga0207704_101796982 | 167 |
| 58 | 3300025986 | Ga0207658_10545136 | Ga0207658_105451362 | 167 |
| 59 | 3300026089 | Ga0207648_10075375 | Ga0207648_100753755 | 167 |
| 60 | 3300026089 | Ga0207648_11153766 | Ga0207648_111537661 | 167 |
| 61 | 3300028381 | Ga0268264_10031299 | Ga0268264_100312996 | 167 |
| 62 | 3300028381 | Ga0268264_10049332 | Ga0268264_100493325 | 167 |
| 63 | 3300041505 | Ga0451849_1505762 | Ga0451849_1505762_106_618 | 167 |
| 64 | 3300041512 | Ga0451853_0400399 | Ga0451853_0400399_123_635 | 167 |
| 65 | 3300044735 | Ga0466968_0413311 | Ga0466968_0413311_105_611 | 167 |
| 66 | 3300048924 | Ga0496121_0000010 | Ga0496121_0000010_23882_24391 | 167 |
| 67 | 3300049758 | Ga0501241_077589 | Ga0501241_077589_113_622 | 167 |
| 68 | 3300050493 | nmdc:mga0k408_69632_c1 | nmdc:mga0k408_69632_c1_70_576 | 167 |
| 69 | 3300002738 | JGI25154J39366_1000007 | JGI25154J39366_100000722 | 168 |
| 70 | 3300002741 | JGI25157J39369_1002277 | JGI25157J39369_10022776 | 168 |
| 71 | 3300003322 | rootL2_10050369 | rootL2_100503691 | 168 |
| 72 | 3300003323 | rootH1_10007189 | rootH1_1000718931 | 168 |
| 73 | 3300003323 | rootH1_10031103 | rootH1_100311037 | 168 |
| 74 | 3300003354 | JGI25160J50197_1007361 | JGI25160J50197_10073613 | 168 |
| 75 | 3300005262 | Ga0065165_1007998 | Ga0065165_10079982 | 168 |
| 76 | 3300005327 | Ga0070658_10021924 | Ga0070658_100219242 | 168 |
| 77 | 3300005457 | Ga0070662_100259673 | Ga0070662_1002596732 | 168 |
| 78 | 3300005518 | Ga0070699_100351742 | Ga0070699_1003517422 | 168 |
| 79 | 3300005563 | Ga0068855_100024230 | Ga0068855_1000242305 | 168 |
| 80 | 3300005563 | Ga0068855_100732984 | Ga0068855_1007329842 | 168 |
| 81 | 3300005578 | Ga0068854_101054477 | Ga0068854_1010544771 | 168 |
| 82 | 3300005843 | Ga0068860_100911574 | Ga0068860_1009115742 | 168 |
| 83 | 3300006195 | Ga0075366_10205344 | Ga0075366_102053442 | 168 |
| 84 | 3300006931 | Ga0097620_101000173 | Ga0097620_1010001732 | 168 |
| 85 | 3300009093 | Ga0105240_10642277 | Ga0105240_106422773 | 168 |
| 86 | 3300009147 | Ga0114129_10002294 | Ga0114129_1000229414 | 168 |
| 87 | 3300009545 | Ga0105237_10160914 | Ga0105237_101609142 | 168 |
| 88 | 3300010375 | Ga0105239_10162101 | Ga0105239_101621012 | 168 |
| 89 | 3300013104 | Ga0157370_10506213 | Ga0157370_105062131 | 168 |
| 90 | 3300013296 | Ga0157374_10444799 | Ga0157374_104447992 | 168 |
| 91 | 3300013307 | Ga0157372_10454545 | Ga0157372_104545452 | 168 |
| 92 | 3300025245 | Ga0207425_1040887 | Ga0207425_10408872 | 168 |
| 93 | 3300025246 | Ga0209646_1000002 | Ga0209646_1000002628 | 168 |
| 94 | 3300025250 | Ga0209026_1000524 | Ga0209026_10005246 | 168 |
| 95 | 3300025258 | Ga0209129_1024396 | Ga0209129_10243962 | 168 |
| 96 | 3300025297 | Ga0209758_1019370 | Ga0209758_10193702 | 168 |
| 97 | 3300025302 | Ga0207426_1000841 | Ga0207426_100084127 | 168 |
| 98 | 3300025302 | Ga0207426_1032182 | Ga0207426_10321822 | 168 |
| 99 | 3300025909 | Ga0207705_10000094 | Ga0207705_1000009460 | 168 |
| 100 | 3300025909 | Ga0207705_10093021 | Ga0207705_100930212 | 168 |
| 101 | 3300025913 | Ga0207695_10133808 | Ga0207695_101338082 | 168 |
| 102 | 3300025914 | Ga0207671_10462086 | Ga0207671_104620861 | 168 |
| 103 | 3300025919 | Ga0207657_10157836 | Ga0207657_101578362 | 168 |
| 104 | 3300025949 | Ga0207667_10014918 | Ga0207667_100149183 | 168 |
| 105 | 3300025949 | Ga0207667_10739267 | Ga0207667_107392672 | 168 |
| 106 | 3300026095 | Ga0207676_10473758 | Ga0207676_104737582 | 168 |
| 107 | 3300028381 | Ga0268264_10300474 | Ga0268264_103004742 | 168 |
| 108 | 3300031456 | Ga0307513_10336680 | Ga0307513_103366802 | 168 |
| 109 | 3300031507 | Ga0307509_10055492 | Ga0307509_100554924 | 168 |
| 110 | 3300031507 | Ga0307509_10105523 | Ga0307509_101055232 | 168 |
| 111 | 3300031616 | Ga0307508_10001720 | Ga0307508_100017205 | 168 |
| 112 | 3300035115 | Ga0373941_0039567 | Ga0373941_0039567_523_1035 | 168 |
| 113 | 3300041406 | Ga0439439_0000752 | Ga0439439_0000752_379_903 | 168 |
| 114 | 3300041512 | Ga0451853_2839415 | Ga0451853_2839415_61_585 | 168 |
| 115 | 3300041999 | Ga0439433_0084630 | Ga0439433_0084630_213_737 | 168 |
| 116 | 3300042004 | Ga0439445_0185753 | Ga0439445_0185753_44_565 | 168 |
| 117 | 3300042007 | Ga0439449_0015734 | Ga0439449_0015734_931_1455 | 168 |
| 118 | 3300042007 | Ga0439449_0029361 | Ga0439449_0029361_469_1050 | 168 |
| 119 | 3300042014 | Ga0439457_000240 | Ga0439457_000240_7997_8521 | 168 |
| 120 | 3300042015 | Ga0439462_0002465 | Ga0439462_0002465_586_1110 | 168 |
| 121 | 3300044656 | Ga0466969_0000305 | Ga0466969_0000305_3019_3537 | 168 |
| 122 | 3300044658 | Ga0466972_0000082 | Ga0466972_0000082_32696_33205 | 168 |
| 123 | 3300044842 | Ga0466957_0000068 | Ga0466957_0000068_34533_35075 | 168 |
| 124 | 3300044842 | Ga0466957_0534490 | Ga0466957_0534490_168_680 | 168 |
| 125 | 3300045049 | Ga0466959_0000030 | Ga0466959_0000030_853_1371 | 168 |
| 126 | 3300046460 | Ga0495638_0341508 | Ga0495638_0341508_215_724 | 168 |
| 127 | 3300046616 | Ga0495668_0002200 | Ga0495668_0002200_4901_5413 | 168 |
| 128 | 3300049513 | Ga0501290_011026 | Ga0501290_011026_597_1118 | 168 |
| 129 | 3300049519 | Ga0501296_003199 | Ga0501296_003199_633_1154 | 168 |
| 130 | 3300049521 | Ga0501298_000044 | Ga0501298_000044_10315_10836 | 168 |
| 131 | 3300049571 | Ga0501034_0364025 | Ga0501034_0364025_263_775 | 168 |
| 132 | 3300049581 | Ga0501047_0012287 | Ga0501047_0012287_1488_2000 | 168 |
| 133 | 3300049581 | Ga0501047_0098612 | Ga0501047_0098612_1595_2107 | 168 |
| 134 | 3300049582 | Ga0501048_0849177 | Ga0501048_0849177_81_593 | 168 |
| 135 | 3300049649 | Ga0501198_008057 | Ga0501198_008057_285_806 | 168 |
| 136 | 3300049651 | Ga0501201_001284 | Ga0501201_001284_694_1215 | 168 |
| 137 | 3300049652 | Ga0501202_063869 | Ga0501202_063869_112_633 | 168 |
| 138 | 3300049653 | Ga0501206_004568 | Ga0501206_004568_663_1184 | 168 |
| 139 | 3300049655 | Ga0501208_002031 | Ga0501208_002031_689_1210 | 168 |
| 140 | 3300049661 | Ga0501217_000687 | Ga0501217_000687_1219_1740 | 168 |
| 141 | 3300049662 | Ga0501222_000944 | Ga0501222_000944_2048_2569 | 168 |
| 142 | 3300049664 | Ga0501224_045889 | Ga0501224_045889_112_633 | 168 |
| 143 | 3300049668 | Ga0501233_001019 | Ga0501233_001019_2916_3437 | 168 |
| 144 | 3300049669 | Ga0501235_000531 | Ga0501235_000531_3205_3726 | 168 |
| 145 | 3300049674 | Ga0501242_004843 | Ga0501242_004843_330_851 | 168 |
| 146 | 3300049680 | Ga0501250_042672 | Ga0501250_042672_44_565 | 168 |
| 147 | 3300049681 | Ga0501251_012925 | Ga0501251_012925_342_863 | 168 |
| 148 | 3300049682 | Ga0501252_003117 | Ga0501252_003117_284_805 | 168 |
| 149 | 3300049688 | Ga0501259_000315 | Ga0501259_000315_4002_4523 | 168 |
| 150 | 3300049690 | Ga0501261_000750 | Ga0501261_000750_2297_2818 | 168 |
| 151 | 3300049705 | Ga0501225_0018164 | Ga0501225_0018164_90_611 | 168 |
| 152 | 3300049707 | Ga0501234_000610 | Ga0501234_000610_2396_2917 | 168 |
| 153 | 3300049758 | Ga0501241_025265 | Ga0501241_025265_112_633 | 168 |
| 154 | 3300049763 | Ga0501266_020227 | Ga0501266_020227_66_587 | 168 |
| 155 | 3300049767 | Ga0501270_008618 | Ga0501270_008618_435_956 | 168 |
| 156 | 3300049779 | Ga0501283_058002 | Ga0501283_058002_144_665 | 168 |
| 157 | 3300049822 | Ga0501035_0387793 | Ga0501035_0387793_423_935 | 168 |
| 158 | 3300049823 | Ga0501044_0009103 | Ga0501044_0009103_6316_6828 | 168 |
| 159 | 3300049824 | Ga0501045_0250605 | Ga0501045_0250605_451_963 | 168 |
| 160 | 3300050493 | nmdc:mga0k408_147319_c1 | nmdc:mga0k408_147319_c1_529_1044 | 168 |
| 161 | 3300050507 | nmdc:mga05p37_7182_c1 | nmdc:mga05p37_7182_c1_9777_10289 | 168 |
| 162 | 3300053080 | Ga0500635_0001349 | Ga0500635_0001349_4010_4522 | 168 |
| 163 | 3300053090 | Ga0500646_0048450 | Ga0500646_0048450_44_556 | 168 |
| 164 | 3300053118 | Ga0500594_0023689 | Ga0500594_0023689_512_1027 | 168 |
| 165 | 3300053125 | Ga0500618_095762 | Ga0500618_095762_39_554 | 168 |
| 166 | 3300053134 | Ga0500658_0070885 | Ga0500658_0070885_809_1318 | 168 |
| 167 | 3300053139 | Ga0500568_0005562 | Ga0500568_0005562_4093_4599 | 168 |
| 168 | 3300053140 | Ga0500573_0045409 | Ga0500573_0045409_1361_1876 | 168 |
| 169 | 3300053144 | Ga0500585_097594 | Ga0500585_097594_514_1041 | 168 |
| 170 | 3300053146 | Ga0500588_0020589 | Ga0500588_0020589_917_1426 | 168 |
| 171 | 3300053156 | Ga0500622_0000162 | Ga0500622_0000162_2391_2927 | 168 |
| 172 | 3300053730 | Ga0500645_021995 | Ga0500645_021995_723_1241 | 168 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2p1a-assembly1.cif.gz_B | crystal structure of a putative metal-binding protein (bce_2162) from bacillus cereus atcc 10987 at 2.10 a resolution | 0.8389 | 18 | 163 |
| 2ou6-assembly1.cif.gz_A-2 | crystal structure of a putative metalloenzyme of the duf664 family (dr_1065) from deinococcus radiodurans at 1.80 a resolution | 0.8325 | 14 | 166 |
| 2p1a-assembly1.cif.gz_A | crystal structure of a putative metal-binding protein (bce_2162) from bacillus cereus atcc 10987 at 2.10 a resolution | 0.8145 | 18 | 163 |
| 2p1a-assembly1.cif.gz_A | crystal structure of a putative metal-binding protein (bce_2162) from bacillus cereus atcc 10987 at 2.10 a resolution | 0.7995 | 18 | 163 |
| 3cex-assembly1.cif.gz_A | crystal structure of the conserved protein of locus ef_3021 from enterococcus faecalis | 0.7991 | 21 | 167 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2hkvA01 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain | 0.8167 | 18 | 168 | 1.20.120.450 |
| 2hkvA01 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain | 0.8061 | 18 | 168 | 1.20.120.450 |
| 2ou6A00 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain | 0.7726 | 18 | 166 | 1.20.120.450 |
| af_O53728_4_171_1.20.120.450 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain | 0.7685 | 19 | 165 | 1.20.120.450 |
| 3dkaA01 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain | 0.7684 | 24 | 164 | 1.20.120.450 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1N6FVR1-F1-model_v4 | DinB family protein | 0.9791 | 9 | 166 |
|
| AF-A0A162NGR1-F1-model_v4 | DinB-like domain-containing protein | 0.976 | 9 | 167 |
|
| AF-A0A1I0NK32-F1-model_v4 | Uncharacterized damage-inducible protein DinB (Forms a four-helix bundle) | 0.9712 | 6 | 167 |
|
| AF-A0A271JE96-F1-model_v4 | Metal-dependent hydrolase | 0.9702 | 6 | 168 |
GO:0016787
|
| AF-A0A6B9ZIJ5-F1-model_v4 | DinB family protein | 0.9688 | 6 | 168 |
|
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar