F260819

General Info

Members Datasets Scaffolds Average Seq Length
172 128 344 537

Family's Representative Sequence

Representative Sequence 3300025299|Ga0209256_1000690|Ga0209256_100069021
Length 573
Sequence MITVTKIVVASLVSGAATEREATLRDQDKARSGRTVKRWATVAALLAATAFADMATAADLPRLVGKDGRHALMVDGAPFLMLGVQANNAANYPSQLPKVWPAVKALHANTLEMPVAWEQIEPVEGQFDFSFVDTLLKQARENDVKLVLLWFATWKNNGPQYAPEWVKLDNKRFPRVITAKGETRNSLSPHFRATVEADKKAFVALMRHLKAVDPDHTVIMVQPENEVGTYNAVRDHSPTAQKLFEGPVPATLVKAMGKKPGTWKAVFGKDADEFFHAWSIGRFVDEVAAAGKRELPLPMYVNAALRDPFKDQDPYTYSSGGPTWNVLDVWKAAAPSIDALAPDIYQRESANVRKTLEQYGRPDNALFVPEIGSDKGYARHVYDVLGRHGIGFAPFGLDHTGYSNYPLGAKQVDAEALENFGVHYRLLAPMAREWARLSFTGDVWGVGEADDRKAETLKLGDRWTATVSYGEWQFGSIEAPWMSKAEKQPNREVPDGGVLIARLSANEFLVTGYRARVTFGSAKDERFMMARVEEGHFENGRWVFDRLWNGDQTDYGLNLTTLPQVLKVKLATY

Samples

Sample ID Description Type Environment
1 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
28 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
29 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
30 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
31 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
32 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
34 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
35 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
49 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
50 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
56 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
57 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
58 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
59 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
60 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
63 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
67 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
68 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
69 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
70 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
71 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
72 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
73 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
74 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
75 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
76 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
77 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
78 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
79 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
80 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
81 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
82 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
83 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
84 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
85 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
86 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
87 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
88 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
89 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
90 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
91 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
92 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
96 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
97 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
98 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
99 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
100 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
101 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
102 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
103 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
104 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
107 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
108 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
109 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
110 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
111 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
112 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
113 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
114 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
115 2643221583 Caulobacter sp. Root655 Isolate Unclassified
116 2643221584 Caulobacter sp. Root656 Isolate Unclassified
117 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
118 2738541337 Pelomonas sp. BT06 Isolate Unclassified
119 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
120 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
121 2818991435 Caulobacter henricii 536 Isolate Unclassified
122 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
123 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
124 2849560528 Caulobacter zeae 410 Isolate Unclassified
125 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
126 2851153111 Caulobacter radicis 736 Isolate Unclassified
127 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
128 2919476304 Duganella sp. 3397 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.37
Metatranscriptomes 0
Isolates 11.63

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.6
Nodule 0
Rhizoplane 2.33
Rhizosphere 67.44
Stem 0
Stem Tuber 0
Unclassified 0.58

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209256_1000690 3300025299 Bacteria 45162
2 JGI25153J46596_10010726 3300003215 Bacteria 4117
3 JGI25153J46596_10010791 3300003215 Bacteria 4100
4 rootH2_10057076 3300003320 Bacteria 5452
5 rootH2_10127167 3300003320 Bacteria 7999
6 rootH1_10004865 3300003323 Bacteria 5474
7 rootH1_10226713 3300003323 Bacteria 3508
8 Ga0055537_1001010 3300003773 Bacteria 12757
9 Ga0055524_1002473 3300003775 Bacteria 9492
10 Ga0055528_1002905 3300003790 Bacteria 8909
11 Ga0055531_10000790 3300003794 Bacteria 26292
12 Ga0055531_10020708 3300003794 Bacteria 2588
13 Ga0070658_10009691 3300005327 Bacteria 7734
14 Ga0070658_10036071 3300005327 Bacteria 3984
15 Ga0070658_10067042 3300005327 Bacteria 2932
16 Ga0070680_100005781 3300005336 Bacteria 9389
17 Ga0070660_100013817 3300005339 Bacteria 5807
18 Ga0070660_100079386 3300005339 Bacteria 2575
19 Ga0070660_100169394 3300005339 Bacteria 1763
20 Ga0070661_100001096 3300005344 Bacteria 19145
21 Ga0070659_100002018 3300005366 Bacteria 14510
22 Ga0070659_100066523 3300005366 Bacteria 2856
23 Ga0070681_10008382 3300005458 Bacteria 10123
24 Ga0070679_100002266 3300005530 Bacteria 17375
25 Ga0070679_100048965 3300005530 Bacteria 4209
26 Ga0068853_100000471 3300005539 Bacteria 27475
27 Ga0068855_100001131 3300005563 Bacteria 33113
28 Ga0070664_100007328 3300005564 Bacteria 8894
29 Ga0068859_100071557 3300005617 Bacteria 3504
30 Ga0068858_100006004 3300005842 Bacteria 11861
31 Ga0097620_100071557 3300006931 Bacteria 3504
32 Ga0105241_10031706 3300009174 Bacteria 3958
33 Ga0105239_10056994 3300010375 Bacteria 4286
34 Ga0157371_10001107 3300013102 Bacteria 29201
35 Ga0157370_10002538 3300013104 Bacteria 21943
36 Ga0157369_10003477 3300013105 Bacteria 18686
37 Ga0157372_10000698 3300013307 Bacteria 36887
38 Ga0182006_1000008 3300015261 Bacteria 449652
39 Ga0182005_1000022 3300015265 Bacteria 266181
40 Ga0183365_10001 3300015684 Bacteria 2090444
41 Ga0209565_1000417 3300025263 Bacteria 35031
42 Ga0209673_1002395 3300025273 Bacteria 13144
43 Ga0209675_1007614 3300025291 Bacteria 4119
44 Ga0209758_1000643 3300025297 Bacteria 53173
45 Ga0209758_1000855 3300025297 Bacteria 42421
46 Ga0209050_1007116 3300025298 Bacteria 6392
47 Ga0209256_1002380 3300025299 Bacteria 15511
48 Ga0209256_1010709 3300025299 Bacteria 3792
49 Ga0209257_1000366 3300025304 Bacteria 91260
50 Ga0209257_1001653 3300025304 Bacteria 25360
51 Ga0207705_10000792 3300025909 Bacteria 25964
52 Ga0207705_10004363 3300025909 Bacteria 10698
53 Ga0207657_10004851 3300025919 Bacteria 14160
54 Ga0207657_10024042 3300025919 Bacteria 5657
55 Ga0207657_10162411 3300025919 Bacteria 1814
56 Ga0207652_10003724 3300025921 Bacteria 12512
57 Ga0207652_10037330 3300025921 Bacteria 4112
58 Ga0207690_10000231 3300025932 Bacteria 41621
59 Ga0207706_10103660 3300025933 Bacteria 2502
60 Ga0207679_10022235 3300025945 Bacteria 4315
61 Ga0207667_10001362 3300025949 Bacteria 30684
62 Ga0207703_10002625 3300026035 Bacteria 15510
63 Ga0207639_10000522 3300026041 Bacteria 26543
64 Ga0207639_10015264 3300026041 Bacteria 5414
65 Ga0207678_10134780 3300026067 Bacteria 2107
66 Ga0207674_10008845 3300026116 Bacteria 11584
67 Ga0207674_10052235 3300026116 Bacteria 4168
68 Ga0307515_10048003 3300028794 Bacteria 6469
69 Ga0265338_10003005 3300028800 Bacteria 24388
70 Ga0265338_10038994 3300028800 Unclassified 4490
71 Ga0265325_10000404 3300031241 Bacteria 30650
72 Ga0316576_10011293 3300031727 Bacteria 5847
73 Ga0316584_0047995 3300036712 Bacteria 3190
74 Ga0395900_0001516 3300037418 Bacteria 27574
75 Ga0395898_0091493 3300037466 Bacteria 2927
76 Ga0395905_0000058 3300037471 Bacteria 200936
77 Ga0395905_0001011 3300037471 Bacteria 35880
78 Ga0451807_0395241 3300041486 Bacteria 1419
79 Ga0439448_0002549 3300042005 Bacteria 4964
80 Ga0439446_0008488 3300042156 Bacteria 2730
81 Ga0466966_0007375 3300044684 Bacteria 7296
82 Ga0466961_0038269 3300044693 Bacteria 3076
83 Ga0466963_0024750 3300044694 Bacteria 3822
84 Ga0466968_0002449 3300044735 Bacteria 6809
85 Ga0466970_0004279 3300044765 Bacteria 7030
86 Ga0466970_0022340 3300044765 Bacteria 3302
87 Ga0466957_0004026 3300044842 Bacteria 8133
88 Ga0466959_0000252 3300045049 Bacteria 33029
89 Ga0466959_0017004 3300045049 Bacteria 5322
90 Ga0466959_0028892 3300045049 Bacteria 4109
91 Ga0466958_0011832 3300045836 Bacteria 4926
92 Ga0495627_000015 3300046453 Bacteria 320787
93 Ga0495627_001053 3300046453 Bacteria 18337
94 Ga0495638_0000513 3300046460 Bacteria 45532
95 Ga0495638_0001360 3300046460 Bacteria 22422
96 Ga0495638_0003265 3300046460 Bacteria 12797
97 Ga0495638_0007640 3300046460 Bacteria 7730
98 Ga0495650_0000030 3300046471 Bacteria 436318
99 Ga0495583_0000002 3300046506 Bacteria 782521
100 Ga0495610_0002568 3300046512 Bacteria 15095
101 Ga0495610_0007036 3300046512 Bacteria 7602
102 Ga0495616_0000240 3300046513 Bacteria 44621
103 Ga0495632_0004632 3300046519 Bacteria 9310
104 Ga0495648_0015920 3300046524 Bacteria 5435
105 Ga0495648_0060113 3300046524 Bacteria 2263
106 Ga0495663_0020785 3300046525 Bacteria 1886
107 Ga0495654_0000042 3300046530 Bacteria 164346
108 Ga0495654_0000065 3300046530 Bacteria 126355
109 Ga0495609_0000575 3300046538 Bacteria 28873
110 Ga0495621_0004797 3300046539 Bacteria 3835
111 Ga0495597_0025075 3300046542 Bacteria 2747
112 Ga0495625_0000068 3300046660 Bacteria 169922
113 Ga0495625_0004261 3300046660 Bacteria 13621
114 Ga0495625_0007380 3300046660 Bacteria 9579
115 Ga0495625_0018934 3300046660 Bacteria 5358
116 Ga0495625_0029599 3300046660 Bacteria 4092
117 Ga0495589_0010221 3300046794 Bacteria 4876
118 Ga0495660_0001191 3300046810 Bacteria 18270
119 Ga0495660_0003333 3300046810 Bacteria 9963
120 Ga0495672_0001289 3300047320 Bacteria 24996
121 Ga0495672_0029686 3300047320 Bacteria 3440
122 Ga0495687_024785 3300047443 Bacteria 2846
123 Ga0495673_0000091 3300047469 Bacteria 187985
124 Ga0495673_0003322 3300047469 Bacteria 10667
125 Ga0495681_0005818 3300047470 Bacteria 8191
126 Ga0495686_0013182 3300047472 Bacteria 5748
127 Ga0495686_0019977 3300047472 Bacteria 4470
128 Ga0496106_0018471 3300048909 Bacteria 5156
129 Ga0496107_0000059 3300048910 Bacteria 53768
130 Ga0496115_0001654 3300048918 Bacteria 16034
131 Ga0496121_0001438 3300048924 Bacteria 40243
132 Ga0495678_000009 3300049459 Bacteria 373806
133 Ga0501034_0100694 3300049571 Bacteria 2884
134 Ga0501037_0047833 3300049573 Bacteria 3134
135 Ga0501044_0065326 3300049823 Bacteria 3710
136 nmdc:mga07m45_8465_c1 3300050496 Bacteria 5290
137 Ga0500643_016061 3300053087 Bacteria 2551
138 Ga0500554_032223 3300053102 Bacteria 1554
139 Ga0500555_006584 3300053103 Bacteria 3304
140 Ga0500556_0000997 3300053104 Bacteria 14942
141 Ga0500608_000102 3300053122 Bacteria 34987
142 Ga0500618_000626 3300053125 Bacteria 21346
143 Ga0500559_0000031 3300053136 Bacteria 114782
144 Ga0500577_0001767 3300053142 Bacteria 5524
145 Ga0500616_0012983 3300053153 Bacteria 4852
146 Ga0500616_0022864 3300053153 Bacteria 3489
147 Ga0500622_0007695 3300053156 Bacteria 6090
148 Ga0500622_0011183 3300053156 Bacteria 4898
149 Ga0500609_000570 3300053731 Bacteria 5576
150 Ga0466962_0000509 3300061719 Bacteria 16925
151 Ga0466962_0003756 3300061719 Bacteria 7252
152 Ga0466962_0006995 3300061719 Bacteria 5407
153 2511123383 2510917020 Bacteria 5657507
154 2585152250 2582581280 Bacteria 5994497
155 2585194267 2582581293 Bacteria 5907401
156 2587917644 2585428106 Bacteria 5179711
157 2643749736 2643221545 Bacteria 5083237
158 2643783290 2643221552 Bacteria 5708754
159 2643925197 2643221583 Bacteria 5218014
160 2643931773 2643221584 Bacteria 5511711
161 2644508692 2643221691 Bacteria 5093099
162 2739055895 2738541337 Bacteria 6183410
163 2739790169 2739367756 Bacteria 4553612
164 2792460253 2791355048 Bacteria 5832535
165 2819539062 2818991435 Bacteria 5433759
166 2819647937 2818991454 Bacteria 5563326
167 2843746824 2843744320 Bacteria 5659202
168 2849560898 2849560528 Bacteria 5393480
169 2849576669 2849573788 Bacteria 5421256
170 2851154104 2851153111 Bacteria 5542585
171 2898333283 2898329390 Bacteria 5168154
172 2919477705 2919476304 Bacteria 5888696
173 Ga0209256_1000690
174 JGI25153J46596_10010726
175 JGI25153J46596_10010791
176 rootH2_10057076
177 rootH2_10127167
178 rootH1_10004865
179 rootH1_10226713
180 Ga0055537_1001010
181 Ga0055524_1002473
182 Ga0055528_1002905
183 Ga0055531_10000790
184 Ga0055531_10020708
185 Ga0070658_10009691
186 Ga0070658_10036071
187 Ga0070658_10067042
188 Ga0070680_100005781
189 Ga0070660_100013817
190 Ga0070660_100079386
191 Ga0070660_100169394
192 Ga0070661_100001096
193 Ga0070659_100002018
194 Ga0070659_100066523
195 Ga0070681_10008382
196 Ga0070679_100002266
197 Ga0070679_100048965
198 Ga0068853_100000471
199 Ga0068855_100001131
200 Ga0070664_100007328
201 Ga0068859_100071557
202 Ga0068858_100006004
203 Ga0097620_100071557
204 Ga0105241_10031706
205 Ga0105239_10056994
206 Ga0157371_10001107
207 Ga0157370_10002538
208 Ga0157369_10003477
209 Ga0157372_10000698
210 Ga0182006_1000008
211 Ga0182005_1000022
212 Ga0183365_10001
213 Ga0209565_1000417
214 Ga0209673_1002395
215 Ga0209675_1007614
216 Ga0209758_1000643
217 Ga0209758_1000855
218 Ga0209050_1007116
219 Ga0209256_1002380
220 Ga0209256_1010709
221 Ga0209257_1000366
222 Ga0209257_1001653
223 Ga0207705_10000792
224 Ga0207705_10004363
225 Ga0207657_10004851
226 Ga0207657_10024042
227 Ga0207657_10162411
228 Ga0207652_10003724
229 Ga0207652_10037330
230 Ga0207690_10000231
231 Ga0207706_10103660
232 Ga0207679_10022235
233 Ga0207667_10001362
234 Ga0207703_10002625
235 Ga0207639_10000522
236 Ga0207639_10015264
237 Ga0207678_10134780
238 Ga0207674_10008845
239 Ga0207674_10052235
240 Ga0307515_10048003
241 Ga0265338_10003005
242 Ga0265338_10038994
243 Ga0265325_10000404
244 Ga0316576_10011293
245 Ga0316584_0047995
246 Ga0395900_0001516
247 Ga0395898_0091493
248 Ga0395905_0000058
249 Ga0395905_0001011
250 Ga0451807_0395241
251 Ga0439448_0002549
252 Ga0439446_0008488
253 Ga0466966_0007375
254 Ga0466961_0038269
255 Ga0466963_0024750
256 Ga0466968_0002449
257 Ga0466970_0004279
258 Ga0466970_0022340
259 Ga0466957_0004026
260 Ga0466959_0000252
261 Ga0466959_0017004
262 Ga0466959_0028892
263 Ga0466958_0011832
264 Ga0495627_000015
265 Ga0495627_001053
266 Ga0495638_0000513
267 Ga0495638_0001360
268 Ga0495638_0003265
269 Ga0495638_0007640
270 Ga0495650_0000030
271 Ga0495583_0000002
272 Ga0495610_0002568
273 Ga0495610_0007036
274 Ga0495616_0000240
275 Ga0495632_0004632
276 Ga0495648_0015920
277 Ga0495648_0060113
278 Ga0495663_0020785
279 Ga0495654_0000042
280 Ga0495654_0000065
281 Ga0495609_0000575
282 Ga0495621_0004797
283 Ga0495597_0025075
284 Ga0495625_0000068
285 Ga0495625_0004261
286 Ga0495625_0007380
287 Ga0495625_0018934
288 Ga0495625_0029599
289 Ga0495589_0010221
290 Ga0495660_0001191
291 Ga0495660_0003333
292 Ga0495672_0001289
293 Ga0495672_0029686
294 Ga0495687_024785
295 Ga0495673_0000091
296 Ga0495673_0003322
297 Ga0495681_0005818
298 Ga0495686_0013182
299 Ga0495686_0019977
300 Ga0496106_0018471
301 Ga0496107_0000059
302 Ga0496115_0001654
303 Ga0496121_0001438
304 Ga0495678_000009
305 Ga0501034_0100694
306 Ga0501037_0047833
307 Ga0501044_0065326
308 nmdc:mga07m45_8465_c1
309 Ga0500643_016061
310 Ga0500554_032223
311 Ga0500555_006584
312 Ga0500556_0000997
313 Ga0500608_000102
314 Ga0500618_000626
315 Ga0500559_0000031
316 Ga0500577_0001767
317 Ga0500616_0012983
318 Ga0500616_0022864
319 Ga0500622_0007695
320 Ga0500622_0011183
321 Ga0500609_000570
322 Ga0466962_0000509
323 Ga0466962_0003756
324 Ga0466962_0006995
325 2511123383
326 2585152250
327 2585194267
328 2587917644
329 2643749736
330 2643783290
331 2643925197
332 2643931773
333 2644508692
334 2739055895
335 2739790169
336 2792460253
337 2819539062
338 2819647937
339 2843746824
340 2849560898
341 2849576669
342 2851154104
343 2898333283
344 2919477705

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18120

DUF5597

Domain of unknown function (DUF5597)

420

560

0.95

PF02449

Glyco_hydro_42

Beta-galactosidase

96

274

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3u7v-assembly1.cif.gz_A the structure of a putative beta-galactosidase from caulobacter crescentus cb15. 0.9769 41 557
3u7v-assembly1.cif.gz_A the structure of a putative beta-galactosidase from caulobacter crescentus cb15. 0.975 41 557
7kmn-assembly1.cif.gz_A crystal structure of xac1772, a gh35 xyloglucan-active beta-galactosidase from xanthomonas citri 0.9702 43 557
8fa4-assembly2.cif.gz_A crystal structure of xanthomonas campestris gana beta-galactosidase 0.9651 43 557
7kmn-assembly1.cif.gz_A crystal structure of xac1772, a gh35 xyloglucan-active beta-galactosidase from xanthomonas citri 0.9646 43 557
ID Description Score Start End Superfamily
3u7vA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9907 41 411 3.20.20.80
3u7vA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9853 41 411 3.20.20.80
3u7vA02 Mainly Beta;Sandwich;Chondroitinase Ac; Chain A, domain 3;putative beta-Galactosidase from caulobacter crescentus 0.9137 415 557 2.60.220.20
3u7vA02 Mainly Beta;Sandwich;Chondroitinase Ac; Chain A, domain 3;putative beta-Galactosidase from caulobacter crescentus 0.9013 415 557 2.60.220.20
5jawD02 Mainly Beta;Sandwich;Chondroitinase Ac; Chain A, domain 3;putative beta-Galactosidase from caulobacter crescentus 0.8352 414 557 2.60.220.20
ID Description Score Start End GO Terms
AF-A0A060CQJ7-F1-model_v4 CAZy families GH35 protein 0.9975 66 228 GO:0004565
GO:0005975
GO:0009341
AF-A0A2T9JUU5-F1-model_v4 Glycoside hydrolase 0.997 57 557 GO:0004565
GO:0005975
GO:0009341
AF-T0ZS05-F1-model_v4 Glycoside hydrolase family 35 0.9965 67 256 GO:0004565
GO:0005975
GO:0009341
AF-A0A836P034-F1-model_v4 Glycoside hydrolase 0.9963 44 294 GO:0004565
GO:0005975
GO:0009341
AF-A0A2T9JUU5-F1-model_v4 Glycoside hydrolase 0.993 57 557 GO:0004565
GO:0005975
GO:0009341

Map