F258510

General Info

Members Datasets Scaffolds Average Seq Length
171 131 340 259

Family's Representative Sequence

Representative Sequence 3300006175|Ga0070712_100192586|Ga0070712_1001925861
Length 297
Sequence MTGELANDARRPFPSPAMSEVSADTAMPGDPADWETVPVLSVIIPVYNEVQTIGRILIEVAKPLPEVPKQIVIVDDRSSDGTSDWLRKNLGQSEGSWRRLSLNTSGALELSAAGPQNHAGISFTVLFHERNRGKGAAVRTGLASASGDVVVIQDADLEYDPNDWSRMFPLIVERKVADVVYGSRFYGRPHRSLYFHHYLGNRLISFLFNLLYNQMLSDIEVCYKMFTKEVLKELRLTSDGFGVEIEISAQIARARRWRIYEVGISYYGRTYDEGKKISWRDGLKALVYLVKFRIRSG

Samples

Sample ID Description Type Environment
1 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
55 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
78 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
79 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
80 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
83 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
84 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
85 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
86 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
87 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
88 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
89 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
90 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
96 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
97 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
98 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
99 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
100 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
111 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
112 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
113 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
114 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
115 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
118 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
119 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
120 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
121 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
122 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
123 2791355123 Mesorhizobium sophorae ICMP 19535 Isolate Unclassified
124 2856349417 Mesorhizobium sp. M4A.F.Ca.ET.090.04.2.1 Isolate Nodule
125 2871451962 Mesorhizobium sp. M7A.F.Ca.US.006.01.1.1 Isolate Nodule
126 2881155292 Mesorhizobium sp. M4B.F.Ca.ET.058.02.1.1 Isolate Nodule
127 2881853255 Mesorhizobium sp. M4A.F.Ca.ET.020.02.1.1 Isolate Nodule
128 2885342637 Mesorhizobium sp. M4A.F.Ca.ET.050.02.1.1 Isolate Nodule
129 2885350715 Mesorhizobium sp. M4A.F.Ca.ET.022.05.2.1 Isolate Nodule
130 2961127735 Mesorhizobium sp. M4A.F.Ca.ET.029.04.2.1 Isolate Nodule
131 8004640170 Mesorhizobium sp. GbtcB19 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.74
Metatranscriptomes 0
Isolates 5.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.34
Nodule 4.09
Rhizoplane 4.09
Rhizosphere 80.12
Stem 0
Stem Tuber 0
Unclassified 5.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070712_100192586 3300006175 Bacteria 1596
2 JGI24740J21852_10010641 3300001979 Bacteria 3533
3 JGI25154J39366_1000022 3300002738 Bacteria 219590
4 rootL2_10149410 3300003322 Bacteria 6350
5 Ga0065704_10261563 3300005289 Bacteria 964
6 Ga0070683_100226747 3300005329 Unclassified 1776
7 Ga0070670_100066455 3300005331 Bacteria 3094
8 Ga0070689_100055834 3300005340 Bacteria 3061
9 Ga0070709_10043095 3300005434 Bacteria 2789
10 Ga0070709_10171705 3300005434 Unclassified 1516
11 Ga0070714_100123212 3300005435 Bacteria 2308
12 Ga0070714_100371477 3300005435 Bacteria 1346
13 Ga0070713_100173872 3300005436 Bacteria 1931
14 Ga0070710_10006836 3300005437 Bacteria 5503
15 Ga0070711_100002575 3300005439 Bacteria 10377
16 Ga0070663_100029071 3300005455 Bacteria 3771
17 Ga0070663_100193176 3300005455 Unclassified 1585
18 Ga0070662_100257039 3300005457 Bacteria 1406
19 Ga0070698_100033461 3300005471 Bacteria 5324
20 Ga0070679_100201490 3300005530 Bacteria 1956
21 Ga0070684_100618764 3300005535 Bacteria 1007
22 Ga0068853_100012103 3300005539 Bacteria 7020
23 Ga0070665_100270581 3300005548 Bacteria 1701
24 Ga0068855_100000206 3300005563 Bacteria 75521
25 Ga0068855_100203235 3300005563 Bacteria 2230
26 Ga0068854_100034445 3300005578 Bacteria 3537
27 Ga0068854_100097154 3300005578 Bacteria 2202
28 Ga0068856_100000249 3300005614 Bacteria 58494
29 Ga0068856_100064679 3300005614 Bacteria 3614
30 Ga0068856_100645335 3300005614 Bacteria 1079
31 Ga0070702_100494412 3300005615 Bacteria 897
32 Ga0068852_100044121 3300005616 Bacteria 3784
33 Ga0068851_10047494 3300005834 Bacteria 2174
34 Ga0068858_100235013 3300005842 Bacteria 1738
35 Ga0081540_1060538 3300005983 Bacteria 1810
36 Ga0070717_10002512 3300006028 Bacteria 12905
37 Ga0070717_10015958 3300006028 Bacteria 5814
38 Ga0070717_10022292 3300006028 Bacteria 5003
39 Ga0070717_10208805 3300006028 Bacteria 1713
40 Ga0070715_10045383 3300006163 Bacteria 1863
41 Ga0070716_100023327 3300006173 Bacteria 3280
42 Ga0070712_100012033 3300006175 Bacteria 5498
43 Ga0070712_100157186 3300006175 Bacteria 1752
44 Ga0070712_100207242 3300006175 Bacteria 1544
45 Ga0075367_10284201 3300006178 Bacteria 1040
46 Ga0075369_10036452 3300006186 Bacteria 2093
47 Ga0097621_100050580 3300006237 Bacteria 3380
48 Ga0068871_100008509 3300006358 Bacteria 7378
49 Ga0075428_100347854 3300006844 Unclassified 1591
50 Ga0105240_10020639 3300009093 Bacteria 8782
51 Ga0111539_10021023 3300009094 Bacteria 8036
52 Ga0105247_10157402 3300009101 Bacteria 1501
53 Ga0105243_10287893 3300009148 Bacteria 1483
54 Ga0105241_10000488 3300009174 Bacteria 29914
55 Ga0105241_10845312 3300009174 Bacteria 846
56 Ga0105242_10005902 3300009176 Bacteria 9442
57 Ga0105237_10137759 3300009545 Unclassified 2435
58 Ga0105238_10074732 3300009551 Bacteria 3381
59 Ga0105239_10225517 3300010375 Bacteria 2102
60 Ga0105239_10894994 3300010375 Bacteria 1019
61 Ga0105246_10289112 3300011119 Bacteria 1318
62 Ga0157374_10525329 3300013296 Bacteria 1190
63 Ga0163162_10012879 3300013306 Bacteria 8167
64 Ga0157375_10383971 3300013308 Bacteria 1571
65 Ga0157380_10069975 3300014326 Bacteria 2834
66 Ga0182008_10007823 3300014497 Bacteria 5878
67 Ga0157376_10003229 3300014969 Bacteria 11214
68 Ga0213876_10027603 3300021384 Bacteria 2995
69 Ga0209646_1001592 3300025246 Bacteria 5888
70 Ga0207697_10092846 3300025315 Bacteria 1280
71 Ga0207699_10007070 3300025906 Bacteria 5470
72 Ga0207699_10330116 3300025906 Bacteria 1072
73 Ga0207654_10000136 3300025911 Bacteria 47311
74 Ga0207654_10026851 3300025911 Bacteria 3123
75 Ga0207695_10001209 3300025913 Bacteria 44290
76 Ga0207693_10001671 3300025915 Bacteria 19555
77 Ga0207693_10161352 3300025915 Bacteria 1764
78 Ga0207693_10179873 3300025915 Bacteria 1664
79 Ga0207663_10078449 3300025916 Bacteria 2153
80 Ga0207663_10342767 3300025916 Bacteria 1129
81 Ga0207663_10490375 3300025916 Bacteria 953
82 Ga0207694_10000135 3300025924 Bacteria 75715
83 Ga0207650_10098446 3300025925 Bacteria 2247
84 Ga0207650_10176023 3300025925 Bacteria 1703
85 Ga0207700_10026255 3300025928 Bacteria 4059
86 Ga0207700_10080955 3300025928 Unclassified 2534
87 Ga0207700_10405875 3300025928 Bacteria 1195
88 Ga0207706_10340013 3300025933 Bacteria 1306
89 Ga0207686_10003034 3300025934 Bacteria 9044
90 Ga0207670_10064369 3300025936 Bacteria 2513
91 Ga0207665_10009635 3300025939 Bacteria 6344
92 Ga0207667_10023193 3300025949 Bacteria 6835
93 Ga0207639_10031822 3300026041 Unclassified 3879
94 Ga0207678_10029578 3300026067 Bacteria 4782
95 Ga0207702_10000026 3300026078 Bacteria 186067
96 Ga0207702_10000646 3300026078 Bacteria 38120
97 Ga0207641_10067566 3300026088 Bacteria 3062
98 Ga0207674_10010590 3300026116 Bacteria 10433
99 Ga0207675_100020725 3300026118 Bacteria 6129
100 Ga0268266_10116337 3300028379 Bacteria 2375
101 Ga0265338_10287927 3300028800 Bacteria 1198
102 Ga0265330_10095678 3300031235 Bacteria 1273
103 Ga0307513_10349842 3300031456 Bacteria 1226
104 Ga0316575_10131266 3300031665 Bacteria 1028
105 Ga0316579_10056907 3300031691 Bacteria 1836
106 Ga0316576_10002201 3300031727 Bacteria 11009
107 Ga0316576_10004298 3300031727 Bacteria 8520
108 Ga0316578_10009079 3300031728 Bacteria 5094
109 Ga0316578_10046751 3300031728 Bacteria 2523
110 Ga0316578_10272521 3300031728 Bacteria 1014
111 Ga0316577_10009092 3300031733 Bacteria 5337
112 Ga0316577_10014665 3300031733 Bacteria 4304
113 Ga0316585_10018659 3300032137 Bacteria 2107
114 Ga0316580_10000920 3300032139 Bacteria 7278
115 Ga0316580_10060468 3300032139 Bacteria 1163
116 Ga0316574_0001444 3300035398 Bacteria 11280
117 Ga0316574_0125309 3300035398 Bacteria 1651
118 Ga0316574_0257491 3300035398 Bacteria 1115
119 Ga0373947_0355320 3300035725 Bacteria 984
120 Ga0373937_0002116 3300036401 Bacteria 16600
121 Ga0316582_0046807 3300036647 Bacteria 2728
122 Ga0316582_0095156 3300036647 Bacteria 1965
123 Ga0316582_0409922 3300036647 Bacteria 934
124 Ga0316584_0004099 3300036712 Bacteria 9608
125 Ga0316584_0121599 3300036712 Bacteria 1950
126 Ga0395900_0091912 3300037418 Bacteria 3118
127 Ga0395905_0076625 3300037471 Bacteria 3134
128 Ga0436364_0043302 3300037853 Bacteria 930
129 Ga0436365_0543013 3300039437 Bacteria 1953
130 Ga0436363_0250175 3300039450 Bacteria 8207
131 Ga0436363_1532253 3300039450 Bacteria 1155
132 Ga0436362_0333372 3300039453 Bacteria 1832
133 Ga0451853_2208395 3300041512 Bacteria 1530
134 Ga0439435_0006728 3300042436 Bacteria 2595
135 Ga0439460_0044266 3300042461 Bacteria 1317
136 Ga0451577_0116157 3300042876 Bacteria 2396
137 Ga0451576_0306065 3300045051 Bacteria 1663
138 Ga0495594_0348056 3300046499 Bacteria 844
139 Ga0495630_0786191 3300046517 Bacteria 727
140 Ga0495667_0063234 3300046559 Unclassified 2423
141 Ga0495635_0394764 3300046663 Bacteria 919
142 Ga0495604_0287291 3300047317 Bacteria 1109
143 Ga0495680_0449614 3300047322 Bacteria 882
144 Ga0495684_0117592 3300047471 Bacteria 2004
145 Ga0496107_0469029 3300048910 Bacteria 935
146 Ga0496108_0581601 3300048911 Bacteria 976
147 Ga0496109_0199532 3300048912 Bacteria 1881
148 Ga0496112_0254268 3300048915 Bacteria 1707
149 Ga0496112_0443268 3300048915 Bacteria 1236
150 Ga0496112_0701230 3300048915 Unclassified 940
151 Ga0496113_0265673 3300048916 Bacteria 1371
152 Ga0496117_0234728 3300048920 Bacteria 1011
153 Ga0496126_0116917 3300048929 Bacteria 2317
154 Ga0496126_0138319 3300048929 Bacteria 2098
155 Ga0501034_0408851 3300049571 Bacteria 1279
156 Ga0501081_0078861 3300049743 Bacteria 2303
157 nmdc:mga0yw44_29162_c2 3300050492 Bacteria 1999
158 nmdc:mga08y16_19900_c1 3300050511 Bacteria 7079
159 nmdc:mga0n895_208827_c1 3300050512 Bacteria 1983
160 Ga0495619_0014768 3300053085 Bacteria 4934
161 Ga0500578_0000661 3300053086 Bacteria 41237
162 2792745670 2791355123 Bacteria 8049106
163 2856353047 2856349417 Bacteria 6230045
164 2871457126 2871451962 Bacteria 7336357
165 2881158361 2881155292 Bacteria 6461656
166 2881857399 2881853255 Bacteria 6698367
167 2885348163 2885342637 Bacteria 7011821
168 2885358015 2885350715 Bacteria 6787678
169 2961132411 2961127735 Bacteria 7196641
170 8004643636 8004640170 Bacteria 6723001
171 Ga0070712_100192586
172 JGI24740J21852_10010641
173 JGI25154J39366_1000022
174 rootL2_10149410
175 Ga0065704_10261563
176 Ga0070683_100226747
177 Ga0070670_100066455
178 Ga0070689_100055834
179 Ga0070709_10043095
180 Ga0070709_10171705
181 Ga0070714_100123212
182 Ga0070714_100371477
183 Ga0070713_100173872
184 Ga0070710_10006836
185 Ga0070711_100002575
186 Ga0070663_100029071
187 Ga0070663_100193176
188 Ga0070662_100257039
189 Ga0070698_100033461
190 Ga0070679_100201490
191 Ga0070684_100618764
192 Ga0068853_100012103
193 Ga0070665_100270581
194 Ga0068855_100000206
195 Ga0068855_100203235
196 Ga0068854_100034445
197 Ga0068854_100097154
198 Ga0068856_100000249
199 Ga0068856_100064679
200 Ga0068856_100645335
201 Ga0070702_100494412
202 Ga0068852_100044121
203 Ga0068851_10047494
204 Ga0068858_100235013
205 Ga0081540_1060538
206 Ga0070717_10002512
207 Ga0070717_10015958
208 Ga0070717_10022292
209 Ga0070717_10208805
210 Ga0070715_10045383
211 Ga0070716_100023327
212 Ga0070712_100012033
213 Ga0070712_100157186
214 Ga0070712_100207242
215 Ga0075367_10284201
216 Ga0075369_10036452
217 Ga0097621_100050580
218 Ga0068871_100008509
219 Ga0075428_100347854
220 Ga0105240_10020639
221 Ga0111539_10021023
222 Ga0105247_10157402
223 Ga0105243_10287893
224 Ga0105241_10000488
225 Ga0105241_10845312
226 Ga0105242_10005902
227 Ga0105237_10137759
228 Ga0105238_10074732
229 Ga0105239_10225517
230 Ga0105239_10894994
231 Ga0105246_10289112
232 Ga0157374_10525329
233 Ga0163162_10012879
234 Ga0157375_10383971
235 Ga0157380_10069975
236 Ga0182008_10007823
237 Ga0157376_10003229
238 Ga0213876_10027603
239 Ga0209646_1001592
240 Ga0207697_10092846
241 Ga0207699_10007070
242 Ga0207699_10330116
243 Ga0207654_10000136
244 Ga0207654_10026851
245 Ga0207695_10001209
246 Ga0207693_10001671
247 Ga0207693_10161352
248 Ga0207693_10179873
249 Ga0207663_10078449
250 Ga0207663_10342767
251 Ga0207663_10490375
252 Ga0207694_10000135
253 Ga0207650_10098446
254 Ga0207650_10176023
255 Ga0207700_10026255
256 Ga0207700_10080955
257 Ga0207700_10405875
258 Ga0207706_10340013
259 Ga0207686_10003034
260 Ga0207670_10064369
261 Ga0207665_10009635
262 Ga0207667_10023193
263 Ga0207639_10031822
264 Ga0207678_10029578
265 Ga0207702_10000026
266 Ga0207702_10000646
267 Ga0207641_10067566
268 Ga0207674_10010590
269 Ga0207675_100020725
270 Ga0268266_10116337
271 Ga0265338_10287927
272 Ga0265330_10095678
273 Ga0307513_10349842
274 Ga0316575_10131266
275 Ga0316579_10056907
276 Ga0316576_10002201
277 Ga0316576_10004298
278 Ga0316578_10009079
279 Ga0316578_10046751
280 Ga0316578_10272521
281 Ga0316577_10009092
282 Ga0316577_10014665
283 Ga0316585_10018659
284 Ga0316580_10000920
285 Ga0316580_10060468
286 Ga0316574_0001444
287 Ga0316574_0125309
288 Ga0316574_0257491
289 Ga0373947_0355320
290 Ga0373937_0002116
291 Ga0316582_0046807
292 Ga0316582_0095156
293 Ga0316582_0409922
294 Ga0316584_0004099
295 Ga0316584_0121599
296 Ga0395900_0091912
297 Ga0395905_0076625
298 Ga0436364_0043302
299 Ga0436365_0543013
300 Ga0436363_0250175
301 Ga0436363_1532253
302 Ga0436362_0333372
303 Ga0451853_2208395
304 Ga0439435_0006728
305 Ga0439460_0044266
306 Ga0451577_0116157
307 Ga0451576_0306065
308 Ga0495594_0348056
309 Ga0495630_0786191
310 Ga0495667_0063234
311 Ga0495635_0394764
312 Ga0495604_0287291
313 Ga0495680_0449614
314 Ga0495684_0117592
315 Ga0496107_0469029
316 Ga0496108_0581601
317 Ga0496109_0199532
318 Ga0496112_0254268
319 Ga0496112_0443268
320 Ga0496112_0701230
321 Ga0496113_0265673
322 Ga0496117_0234728
323 Ga0496126_0116917
324 Ga0496126_0138319
325 Ga0501034_0408851
326 Ga0501081_0078861
327 nmdc:mga0yw44_29162_c2
328 nmdc:mga08y16_19900_c1
329 nmdc:mga0n895_208827_c1
330 Ga0495619_0014768
331 Ga0500578_0000661
332 2792745670
333 2856353047
334 2871457126
335 2881158361
336 2881857399
337 2885348163
338 2885358015
339 2961132411
340 8004643636

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

41

100

0.94

PF00535

Glycos_transf_2

Glycosyl transferase family 2

111

235

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mm1-assembly1.cif.gz_A dolichyl phosphate mannose synthase in complex with gdp and dolichyl phosphate mannose 0.8363 3 247
5mm0-assembly1.cif.gz_A dolichyl phosphate mannose synthase in complex with gdp-mannose and mn2+ (donor complex) 0.8188 1 253
5ekp-assembly1.cif.gz_A structure of the polyisoprenyl-phosphate glycosyltransferase gtrb (wt) 0.7978 1 247
7qoq-assembly1.cif.gz_A crystal structure of mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at ph 8.5 in complex with ump and magnesium 0.7751 2 252
5jud-assembly1.cif.gz_A-2 crystal structure of glucosyl-3-phosphoglycerate synthase from mycobacterium tuberculosis in complex with uridine-diphosphate (udp) - gpgs*udp 0.7732 2 250
ID Description Score Start End Superfamily
af_Q58619_2_238_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8638 2 245 3.90.550.10
af_Q57964_2_229_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8469 5 250 3.90.550.10
af_P9WMY1_2_214_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8383 3 245 3.90.550.10
af_O53493_586_855_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8356 2 253 3.90.550.10
af_Q57964_2_229_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8331 5 250 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A6G3Z0U0-F1-model_v4 Glycosyltransferase family 2 protein 0.9758 82 250 GO:0016757
AF-X1R954-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.9663 89 251 GO:0016757
AF-A0A1F8N5U1-F1-model_v4 Glycosyl transferase 0.9653 84 251 GO:0016757
AF-A0A0G1PV40-F1-model_v4 Glycosyl transferase family 2 0.9652 82 251 GO:0016757
AF-A0A7Z9G8B4-F1-model_v4 Glycosyltransferase family 2 protein 0.9623 1 250 GO:0016757

Map