F257786

General Info

Members Datasets Scaffolds Average Seq Length
170 126 340 409

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006978542|3006981083
Length 463
Sequence SSLPETIRSLIVTKALRLFLFYRKMLSVEREVSIKDSVHSPFFLLSYLSPSEKRNVMSQLLKNRFVRAIFLSSLFLQVGIWVRNFAVLLFVMEKTNGDAFAVSMISVAEFAPIFIFSFIGGTFADRWRPKRTMIWCDILSAISVFAVLITLVFGSWKIIFFATLISAILSQFSQPSGMKLFKMHLGEELIQSAMAIYQTIFAVFMVFGPVLGTFIFQQFGIDVSIAITGVAFLLSAVMLAFIPADHSMENEKKESTLLEEMKSGIRYVMSKKELKLLGLCFMAAGLAIGLIQPLNIFLVTERLELPKENLQWLLMANGIGMIVGGAASVMFSKSVPPQRLLMLGMLANAIGMAVVGYSTNLPITLGAEFFNGLFFPCIQIGINTMILQNTKSEFIGRVNGTLSPLFTGSMVLTMSIAGVLKESFSIIFMFELAAILFVFGLLAILPIYNLKAPNQEKVMLAKD

Samples

Sample ID Description Type Environment
1 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
8 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
9 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
10 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
11 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
12 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
13 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
14 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
15 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
16 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
17 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
19 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
21 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
25 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
26 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
27 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
28 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
29 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
30 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
31 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
32 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
33 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
34 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
35 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
36 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
37 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
38 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
39 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
40 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
41 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
42 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
43 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
44 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
45 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
46 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
47 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
48 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
49 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
50 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
51 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
52 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
53 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
54 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
55 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
56 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
57 2643221729 Bacillus sp. Root11 Isolate Unclassified
58 2643221730 Bacillus sp. Root131 Isolate Unclassified
59 2643221731 Bacillus sp. Root147 Isolate Unclassified
60 2643221732 Bacillus sp. Root239 Isolate Unclassified
61 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
62 2671180694 Paenibacillus sp. A3 Isolate Unclassified
63 2684622632 Bacillus cereus 905 Isolate Unclassified
64 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
65 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
66 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
67 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
68 2738541358 Bacillus sp. OV752 Isolate Unclassified
69 2738543006 Bacillus sp. OK077 Isolate Unclassified
70 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
71 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
72 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
73 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
74 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
75 2842682962 Bacillus sp. R-72492 Isolate Unclassified
76 2849139964 Bacillus sp. R-71875 Isolate Unclassified
77 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
78 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
79 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
80 2857581216 Bacillus sp. R-71922 Isolate Unclassified
81 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
82 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
83 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
84 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
85 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
86 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
87 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
88 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
89 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
90 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
91 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
92 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
93 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
94 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
95 2929004312 Priestia megaterium 1104 Isolate Unclassified
96 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
97 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
98 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
99 2938917290 Bacillus sp. CR71 Isolate Unclassified
100 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
101 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
102 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
103 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
104 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
105 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
106 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
107 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
108 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
109 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
110 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
111 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
112 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
113 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
114 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
115 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
116 8022792930 Bacillus sp. Xin Isolate Rhizosphere
117 8023438354 Bacillus sp. BH2 Isolate Unclassified
118 8023444577 Bacillus sp. BH32 Isolate Unclassified
119 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
120 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
121 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
122 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
123 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
124 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
125 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
126 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 48.82
Metatranscriptomes 0.59
Isolates 50.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.88
Nodule 4.71
Rhizoplane 4.71
Rhizosphere 33.53
Stem 0
Stem Tuber 0
Unclassified 0.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1003830 3300002987 Bacteria 5177
2 JGI25151J46595_10036503 3300003187 Bacteria 1853
3 rootH1_10000470 3300003316 Bacteria 5562
4 rootL2_10085106 3300003322 Bacteria 2160
5 Ga0006562J51391_1000477 3300003578 Bacteria 3705
6 Ga0055532_1000953 3300003758 Bacteria 9298
7 Ga0055535_1005873 3300003761 Bacteria 2594
8 Ga0055541_1000274 3300003841 Bacteria 17861
9 Ga0055541_1002777 3300003841 Bacteria 3409
10 Ga0055541_1004551 3300003841 Bacteria 2503
11 Ga0079104_1000728 3300006946 Bacteria 29244
12 Ga0079104_1001849 3300006946 Bacteria 12896
13 Ga0079104_1004468 3300006946 Bacteria 5966
14 Ga0105251_10039393 3300009011 Bacteria 2310
15 Ga0105244_10001473 3300009036 Bacteria 19005
16 Ga0105244_10081709 3300009036 Bacteria 1598
17 Ga0105250_10002536 3300009092 Bacteria 9135
18 Ga0105250_10005090 3300009092 Bacteria 5939
19 Ga0157374_10042274 3300013296 Bacteria 4204
20 Ga0157378_10131180 3300013297 Bacteria 2320
21 Ga0209566_100042 3300025225 Bacteria 287384
22 Ga0209566_100180 3300025225 Bacteria 67946
23 Ga0209566_100445 3300025225 Bacteria 30484
24 Ga0209566_100737 3300025225 Bacteria 18357
25 Ga0209566_103463 3300025225 Bacteria 2415
26 Ga0209147_100110 3300025229 Bacteria 146408
27 Ga0209147_101598 3300025229 Bacteria 7645
28 Ga0209147_103167 3300025229 Bacteria 3385
29 Ga0209258_102055 3300025242 Bacteria 5723
30 Ga0209130_1000213 3300025284 Bacteria 76301
31 Ga0209130_1001180 3300025284 Bacteria 18680
32 Ga0209676_1002069 3300025292 Bacteria 15601
33 Ga0209676_1004723 3300025292 Bacteria 7461
34 Ga0209025_1000385 3300025294 Bacteria 91480
35 Ga0209025_1001589 3300025294 Bacteria 28605
36 Ga0209025_1003145 3300025294 Bacteria 16122
37 Ga0209025_1005326 3300025294 Bacteria 10562
38 Ga0209025_1009485 3300025294 Bacteria 6768
39 Ga0209025_1014006 3300025294 Bacteria 4984
40 Ga0209025_1023015 3300025294 Bacteria 3278
41 Ga0207696_1008585 3300025711 Bacteria 3886
42 Ga0207696_1008807 3300025711 Bacteria 3819
43 Ga0207655_1001727 3300025728 Bacteria 19187
44 Ga0207655_1017686 3300025728 Bacteria 3832
45 Ga0207713_1014896 3300025735 Bacteria 4013
46 Ga0209281_1000044 3300027111 Bacteria 336476
47 Ga0209281_1000304 3300027111 Bacteria 87871
48 Ga0237817_10001 3300030083 Bacteria 112252
49 Ga0237817_10043 3300030083 Bacteria 43855
50 Ga0395899_0019692 3300037312 Bacteria 5123
51 Ga0395899_0067654 3300037312 Bacteria 2621
52 Ga0237819_00004 3300038705 Bacteria 86502
53 Ga0237819_00057 3300038705 Bacteria 39435
54 Ga0439449_0006825 3300042007 Bacteria 4353
55 Ga0466969_0059107 3300044656 Bacteria 1864
56 Ga0466968_0012336 3300044735 Bacteria 3344
57 Ga0466968_0047596 3300044735 Bacteria 1824
58 Ga0466959_0000815 3300045049 Bacteria 18381
59 Ga0466959_0004918 3300045049 Bacteria 9048
60 Ga0466967_0004183 3300045976 Bacteria 9663
61 Ga0495654_0021606 3300046530 Bacteria 3347
62 Ga0495654_0032371 3300046530 Bacteria 2651
63 Ga0495672_0021770 3300047320 Bacteria 4176
64 Ga0495626_0089450 3300048091 Unclassified 1356
65 Ga0496100_0101845 3300048903 Bacteria 1980
66 Ga0496106_0156522 3300048909 Bacteria 1800
67 Ga0496109_0098184 3300048912 Bacteria 2715
68 Ga0496110_0039036 3300048913 Bacteria 4133
69 Ga0496111_0019564 3300048914 Bacteria 4706
70 Ga0496111_0053490 3300048914 Bacteria 2917
71 Ga0496112_0098701 3300048915 Bacteria 2890
72 Ga0496116_0015976 3300048919 Bacteria 5904
73 Ga0496116_0046372 3300048919 Bacteria 2933
74 Ga0496116_0067447 3300048919 Bacteria 2285
75 Ga0496117_0013007 3300048920 Bacteria 7288
76 Ga0496122_0019011 3300048925 Bacteria 6302
77 Ga0496122_0019311 3300048925 Bacteria 6232
78 Ga0496122_0142884 3300048925 Bacteria 1493
79 Ga0496123_0032358 3300048926 Bacteria 3789
80 Ga0496124_0000207 3300048927 Bacteria 116491
81 Ga0496124_0003829 3300048927 Bacteria 18031
82 Ga0496125_0002752 3300048928 Bacteria 22243
83 Ga0496126_0000730 3300048929 Bacteria 59731
84 Ga0496126_0002151 3300048929 Bacteria 27452
85 3006981083 3006978542 Bacteria 5328100
86 2511177270 2510917027 Bacteria 5287437
87 2512638765 2512564013 Bacteria 6286191
88 2512639304 2512564013 Bacteria 6286191
89 2512734215 2512564039 Bacteria 8739048
90 2524190134 2524023129 Bacteria 6762600
91 2563927592 2563366752 Bacteria 4961801
92 2595319660 2593339198 Bacteria 7267884
93 2601637957 2600255286 Bacteria 5390125
94 2644702815 2643221729 Bacteria 6621700
95 2644711534 2643221730 Bacteria 6523787
96 2644721237 2643221731 Bacteria 5623886
97 2644723403 2643221732 Bacteria 5756404
98 2672336043 2671180330 Bacteria 5521719
99 2673817897 2671180694 Bacteria 7506943
100 2673821775 2671180694 Bacteria 7506943
101 2685150590 2684622632 Bacteria 5380049
102 2698322676 2695420987 Bacteria 6152737
103 2705994528 2703719227 Bacteria 5631989
104 2721505809 2718218445 Bacteria 5113413
105 2728534420 2728368933 Bacteria 7044283
106 2739155980 2738541358 Bacteria 5932299
107 2739208759 2738543006 Bacteria 5904091
108 2745169322 2744054657 Bacteria 5016802
109 2793184987 2791355222 Bacteria 5898266
110 2816864703 2816332186 Bacteria 5331395
111 2817616981 2816332336 Bacteria 5207640
112 2817618866 2816332336 Bacteria 5207640
113 2819583983 2818991443 Bacteria 6598732
114 2842683531 2842682962 Bacteria 5589973
115 2849144731 2849139964 Bacteria 5613304
116 2857456526 2857453340 Bacteria 8090534
117 2857460653 2857460504 Bacteria 5194327
118 2857462008 2857460504 Bacteria 5194327
119 2857472302 2857465823 Bacteria 6772595
120 2857581459 2857581216 Bacteria 5522813
121 2857597737 2857591370 Bacteria 6569758
122 2865004948 2865002811 Bacteria 6333767
123 2885531545 2885526491 Bacteria 7164189
124 2898911185 2898907183 Bacteria 4067722
125 2904117127 2904113452 Bacteria 7796941
126 2904163920 2904162308 Bacteria 7086713
127 2904529541 2904524088 Bacteria 5887454
128 2915597557 2915597211 Bacteria 6475886
129 2915598860 2915597211 Bacteria 6475886
130 2915608971 2915606848 Bacteria 6032732
131 2919148868 2919143609 Bacteria 6219228
132 2919416671 2919414237 Bacteria 5429133
133 2919522607 2919517244 Bacteria 5858162
134 2925326649 2925326138 Bacteria 9652120
135 2925331299 2925326138 Bacteria 9652120
136 2928100140 2928093941 Bacteria 5965005
137 2929009970 2929004312 Bacteria 5678476
138 2929183983 2929183550 Bacteria 6377511
139 2929189044 2929183550 Bacteria 6377511
140 2929236278 2929233124 Bacteria 5948380
141 2936364198 2936361878 Bacteria 5632809
142 2938920182 2938917290 Bacteria 5914775
143 2947429282 2947426588 Bacteria 5357194
144 2956899957 2956897341 Bacteria 5447711
145 2960379720 2960375949 Bacteria 5361395
146 2971414169 2971410472 Bacteria 8311090
147 2977255943 2977254563 Bacteria 4828420
148 2979086241 2979083700 Bacteria 5894929
149 2980126620 2980125574 Bacteria 5567337
150 2988231048 2988225383 Bacteria 7221625
151 2990276763 2990275345 Bacteria 4887158
152 3001270710 3001267043 Bacteria 4823521
153 3001276334 3001272096 Bacteria 4729684
154 3006976885 3006973921 Bacteria 4423788
155 3006987975 3006984091 Bacteria 4207523
156 3006991893 3006988479 Bacteria 4767936
157 8002319459 8002317523 Bacteria 8051857
158 8022625198 8022621104 Bacteria 5241040
159 8022795611 8022792930 Bacteria 5693794
160 8023442167 8023438354 Bacteria 5779374
161 8023446183 8023444577 Bacteria 5661597
162 8046992954 8046991243 Bacteria 8497463
163 8054283427 8054280661 Bacteria 4232245
164 8054796112 8054795415 Bacteria 9785225
165 8055636044 8055632911 Bacteria 5283357
166 8056539247 8056533031 Bacteria 8964429
167 8057585214 8057582654 Bacteria 5218944
168 8057735419 8057733483 Bacteria 6578323
169 8057738758 8057733483 Bacteria 6578323
170 8057978307 8057977335 Bacteria 5694872
171 JGI25159J45721_1003830
172 JGI25151J46595_10036503
173 rootH1_10000470
174 rootL2_10085106
175 Ga0006562J51391_1000477
176 Ga0055532_1000953
177 Ga0055535_1005873
178 Ga0055541_1000274
179 Ga0055541_1002777
180 Ga0055541_1004551
181 Ga0079104_1000728
182 Ga0079104_1001849
183 Ga0079104_1004468
184 Ga0105251_10039393
185 Ga0105244_10001473
186 Ga0105244_10081709
187 Ga0105250_10002536
188 Ga0105250_10005090
189 Ga0157374_10042274
190 Ga0157378_10131180
191 Ga0209566_100042
192 Ga0209566_100180
193 Ga0209566_100445
194 Ga0209566_100737
195 Ga0209566_103463
196 Ga0209147_100110
197 Ga0209147_101598
198 Ga0209147_103167
199 Ga0209258_102055
200 Ga0209130_1000213
201 Ga0209130_1001180
202 Ga0209676_1002069
203 Ga0209676_1004723
204 Ga0209025_1000385
205 Ga0209025_1001589
206 Ga0209025_1003145
207 Ga0209025_1005326
208 Ga0209025_1009485
209 Ga0209025_1014006
210 Ga0209025_1023015
211 Ga0207696_1008585
212 Ga0207696_1008807
213 Ga0207655_1001727
214 Ga0207655_1017686
215 Ga0207713_1014896
216 Ga0209281_1000044
217 Ga0209281_1000304
218 Ga0237817_10001
219 Ga0237817_10043
220 Ga0395899_0019692
221 Ga0395899_0067654
222 Ga0237819_00004
223 Ga0237819_00057
224 Ga0439449_0006825
225 Ga0466969_0059107
226 Ga0466968_0012336
227 Ga0466968_0047596
228 Ga0466959_0000815
229 Ga0466959_0004918
230 Ga0466967_0004183
231 Ga0495654_0021606
232 Ga0495654_0032371
233 Ga0495672_0021770
234 Ga0495626_0089450
235 Ga0496100_0101845
236 Ga0496106_0156522
237 Ga0496109_0098184
238 Ga0496110_0039036
239 Ga0496111_0019564
240 Ga0496111_0053490
241 Ga0496112_0098701
242 Ga0496116_0015976
243 Ga0496116_0046372
244 Ga0496116_0067447
245 Ga0496117_0013007
246 Ga0496122_0019011
247 Ga0496122_0019311
248 Ga0496122_0142884
249 Ga0496123_0032358
250 Ga0496124_0000207
251 Ga0496124_0003829
252 Ga0496125_0002752
253 Ga0496126_0000730
254 Ga0496126_0002151
255 3006981083
256 2511177270
257 2512638765
258 2512639304
259 2512734215
260 2524190134
261 2563927592
262 2595319660
263 2601637957
264 2644702815
265 2644711534
266 2644721237
267 2644723403
268 2672336043
269 2673817897
270 2673821775
271 2685150590
272 2698322676
273 2705994528
274 2721505809
275 2728534420
276 2739155980
277 2739208759
278 2745169322
279 2793184987
280 2816864703
281 2817616981
282 2817618866
283 2819583983
284 2842683531
285 2849144731
286 2857456526
287 2857460653
288 2857462008
289 2857472302
290 2857581459
291 2857597737
292 2865004948
293 2885531545
294 2898911185
295 2904117127
296 2904163920
297 2904529541
298 2915597557
299 2915598860
300 2915608971
301 2919148868
302 2919416671
303 2919522607
304 2925326649
305 2925331299
306 2928100140
307 2929009970
308 2929183983
309 2929189044
310 2929236278
311 2936364198
312 2938920182
313 2947429282
314 2956899957
315 2960379720
316 2971414169
317 2977255943
318 2979086241
319 2980126620
320 2988231048
321 2990276763
322 3001270710
323 3001276334
324 3006976885
325 3006987975
326 3006991893
327 8002319459
328 8022625198
329 8022795611
330 8023442167
331 8023446183
332 8046992954
333 8054283427
334 8054796112
335 8055636044
336 8056539247
337 8057585214
338 8057735419
339 8057738758
340 8057978307

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

277

461

0.91

PF05977

MFS_3

Transmembrane secretion effector

57

462

0.88

PF07690

MFS_1

Major Facilitator Superfamily

69

288

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6vs2-assembly1.cif.gz_A protein d 0.8295 19 399
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.8292 20 400
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.8268 20 400
4zow-assembly1.cif.gz_A crystal structure of e. coli multidrug transporter mdfa in complex with chloramphenicol 0.8173 18 399
7dla-assembly1.cif.gz_A crystal structure of nucleoside transporter nupg (d323a mutant) 0.8143 20 398
ID Description Score Start End Superfamily
af_Q4D047_16_187_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9292 235 401 1.20.1250.20
af_A0A1D6LG74_1_148_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9176 275 400 1.20.1250.20
af_P77589_213_398_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9116 228 399 1.20.1250.20
af_P25744_212_408_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9109 228 400 1.20.1250.20
af_Q8BGC3_251_439_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9068 227 399 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A7S7JER5-F1-model_v4 deleted 0.9171 20 195
AF-A0A382JUR5-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9102 12 194 GO:0005886
GO:0022857
AF-A0A4Q3KD35-F1-model_v4 deleted 0.9088 17 224
AF-A0A849EUY9-F1-model_v4 MFS transporter 0.9049 14 399 GO:0005886
AF-A0A7U3AAA7-F1-model_v4 deleted 0.9032 14 402

Map