F257307

General Info

Members Datasets Scaffolds Average Seq Length
170 118 340 447

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0023351|Ga0453684_0023351_497_1939
Length 480
Sequence MRRTSPAGSQDLERERIWDRYENIVNQTEPMRYEGTVQNVTGLLVEGRGPRGKIGDLCHIFLSPDAKPVRAEITGFKGTATLLMAYEDLHGIQPGCKIKGTGAPLTINLSNDLLGRVLNGTAEAEDNMPEVISSDTRLIFGEPPPALERKLIEQVLPTGVRSIDGCITLGRGQRVGIFSGSGVGKSTLLGMIARNTAADVNVIALVGERGREVREFIQNDLGPEGLKRSVMVVATSDDTPLTKIRAAYVATTIAEFFRDQGKDVLLMMDSITRFARAQREIGLANGEPPGLGGFPPSVLALLSKVLERAGTGTKGSITGIYTVLVEGDDLNDPVSDAVRGILDGHIVLSRSMAELNHYPAVDVLGSISRLMSKVVTKDHKQMSGQIREILAKHRESFDLIRFGAYVAGSDPRTDFAIKMIDQVNAFLKQDMEEKASFEEVLASLTRIFKGSGKFENDDTSGEKVPERFNDLLERISSEAI

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
8 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
25 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
26 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
27 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
35 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
36 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
37 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
38 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
39 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
40 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
41 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
45 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
46 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
47 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
50 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
51 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
52 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
53 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
54 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
55 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
56 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
57 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
58 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
59 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
60 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
61 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
62 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
63 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
64 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
65 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
66 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
67 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
68 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
69 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
70 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
71 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
72 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
73 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
74 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
75 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
76 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
77 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
80 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
82 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
83 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
84 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
85 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
86 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
87 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
88 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
89 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
90 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
91 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
92 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
93 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
94 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
95 2818991459 Paenibacillus sp. 597 Isolate Unclassified
96 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
97 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
98 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
99 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
100 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
101 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
102 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
103 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
104 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
105 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
106 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
107 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere
108 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
109 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
110 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
111 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
112 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
113 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
114 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
115 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
116 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
117 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
118 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 81.18
Metatranscriptomes 0
Isolates 18.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.35
Nodule 0
Rhizoplane 0
Rhizosphere 72.35
Stem 0
Stem Tuber 0
Unclassified 0.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0023351 3300044712 Bacteria 9118
2 Ga0070658_10054429 3300005327 Bacteria 3249
3 Ga0070714_100042518 3300005435 Bacteria 3840
4 Ga0070681_10072146 3300005458 Bacteria 3416
5 Ga0070681_10201519 3300005458 Bacteria 1908
6 Ga0070706_100013148 3300005467 Bacteria 7659
7 Ga0070679_100127674 3300005530 Bacteria 2524
8 Ga0070686_100002520 3300005544 Bacteria 10096
9 Ga0070704_100021386 3300005549 Bacteria 4193
10 Ga0068856_100116417 3300005614 Bacteria 2673
11 Ga0068859_100095838 3300005617 Bacteria 3020
12 Ga0075365_10003679 3300006038 Bacteria 7958
13 Ga0075365_10005803 3300006038 Bacteria 6704
14 Ga0075365_10009320 3300006038 Bacteria 5634
15 Ga0075368_10005149 3300006042 Bacteria 4481
16 Ga0075368_10017061 3300006042 Bacteria 2713
17 Ga0075363_100001980 3300006048 Bacteria 8148
18 Ga0075364_10009666 3300006051 Bacteria 5795
19 Ga0075362_10010168 3300006177 Bacteria 3665
20 Ga0075367_10010528 3300006178 Bacteria 4860
21 Ga0075367_10054056 3300006178 Bacteria 2380
22 Ga0097620_100095840 3300006931 Bacteria 3020
23 Ga0105244_10018279 3300009036 Bacteria 3937
24 Ga0105240_10063961 3300009093 Bacteria 4573
25 Ga0105240_10143214 3300009093 Bacteria 2856
26 Ga0105242_10118821 3300009176 Bacteria 2265
27 Ga0105238_10005098 3300009551 Bacteria 12987
28 Ga0105238_10044236 3300009551 Bacteria 4502
29 Ga0105239_10009621 3300010375 Bacteria 10874
30 Ga0157370_10008284 3300013104 Bacteria 11217
31 Ga0213876_10060546 3300021384 Bacteria 1997
32 Ga0209675_1008242 3300025291 Bacteria 3862
33 Ga0209025_1006560 3300025294 Bacteria 8980
34 Ga0207655_1026316 3300025728 Bacteria 2795
35 Ga0207707_10015730 3300025912 Bacteria 6594
36 Ga0207695_10051563 3300025913 Bacteria 4318
37 Ga0207695_10288474 3300025913 Bacteria 1534
38 Ga0207646_10077023 3300025922 Bacteria 2981
39 Ga0207694_10005130 3300025924 Bacteria 10108
40 Ga0207664_10016351 3300025929 Bacteria 5412
41 Ga0207667_10227050 3300025949 Bacteria 1912
42 Ga0265337_1000378 3300028556 Bacteria 23910
43 Ga0265337_1002684 3300028556 Bacteria 7991
44 Ga0265326_10007234 3300028558 Bacteria 3412
45 Ga0265334_10009427 3300028573 Bacteria 4128
46 Ga0265322_10019719 3300028654 Bacteria 1934
47 Ga0265338_10000036 3300028800 Bacteria 238689
48 Ga0265338_10000145 3300028800 Bacteria 130629
49 Ga0265338_10000248 3300028800 Bacteria 98976
50 Ga0265338_10000336 3300028800 Bacteria 85530
51 Ga0265338_10000879 3300028800 Bacteria 50689
52 Ga0265338_10001270 3300028800 Bacteria 41574
53 Ga0265338_10002302 3300028800 Bacteria 29033
54 Ga0265338_10004657 3300028800 Bacteria 18429
55 Ga0265338_10004880 3300028800 Bacteria 17867
56 Ga0265338_10006080 3300028800 Bacteria 15500
57 Ga0265338_10010559 3300028800 Bacteria 10802
58 Ga0265338_10015854 3300028800 Bacteria 8248
59 Ga0265338_10023867 3300028800 Bacteria 6270
60 Ga0265338_10035124 3300028800 Bacteria 4827
61 Ga0265324_10001771 3300029957 Bacteria 11805
62 Ga0265324_10003111 3300029957 Bacteria 8090
63 Ga0265324_10010401 3300029957 Bacteria 3587
64 Ga0265324_10010536 3300029957 Bacteria 3556
65 Ga0265324_10024308 3300029957 Bacteria 2152
66 Ga0265332_10010873 3300031238 Bacteria 4043
67 Ga0265332_10031610 3300031238 Bacteria 2308
68 Ga0265328_10027550 3300031239 Bacteria 2129
69 Ga0265320_10000229 3300031240 Bacteria 45914
70 Ga0265320_10010631 3300031240 Bacteria 5463
71 Ga0265320_10014482 3300031240 Bacteria 4486
72 Ga0265320_10018776 3300031240 Bacteria 3798
73 Ga0265325_10015409 3300031241 Bacteria 4298
74 Ga0265329_10001669 3300031242 Bacteria 10643
75 Ga0265340_10003765 3300031247 Bacteria 8538
76 Ga0265339_10004674 3300031249 Bacteria 9298
77 Ga0265339_10010171 3300031249 Bacteria 5857
78 Ga0265327_10000926 3300031251 Bacteria 42944
79 Ga0265316_10007538 3300031344 Bacteria 10238
80 Ga0265316_10058779 3300031344 Bacteria 2993
81 Ga0265313_10024600 3300031595 Bacteria 3213
82 Ga0265314_10000037 3300031711 Bacteria 225790
83 Ga0265314_10047004 3300031711 Bacteria 3041
84 Ga0373927_0014271 3300035695 Bacteria 5265
85 Ga0373925_0016259 3300037068 Bacteria 5386
86 Ga0436364_0870860 3300037853 Bacteria 12414
87 Ga0400490_38515 3300038726 Unclassified 2858
88 Ga0400490_48417 3300038726 Bacteria 76530
89 Ga0436365_1074703 3300039437 Bacteria 25751
90 Ga0436365_1123896 3300039437 Bacteria 6946
91 Ga0451577_0000967 3300042876 Bacteria 42024
92 Ga0453684_0001577 3300044712 Bacteria 63055
93 Ga0453684_0008107 3300044712 Bacteria 18986
94 Ga0453684_0015724 3300044712 Bacteria 11919
95 Ga0453684_0037308 3300044712 Bacteria 6672
96 Ga0453684_0111757 3300044712 Bacteria 3318
97 Ga0466960_0033165 3300044901 Bacteria 2398
98 Ga0451576_0003815 3300045051 Bacteria 20279
99 Ga0451576_0131765 3300045051 Bacteria 2606
100 Ga0495592_0000315 3300046454 Bacteria 40668
101 Ga0495664_0014917 3300046477 Bacteria 4412
102 Ga0495618_0003460 3300046514 Bacteria 9807
103 Ga0495628_0000127 3300046516 Bacteria 63790
104 Ga0495630_0001483 3300046517 Bacteria 16224
105 Ga0495630_0017535 3300046517 Bacteria 5247
106 Ga0495666_0004615 3300046526 Bacteria 6967
107 Ga0495652_0212730 3300046529 Bacteria 1458
108 Ga0495640_0009874 3300046533 Bacteria 7405
109 Ga0495586_0001992 3300046535 Bacteria 11087
110 Ga0495645_0014255 3300046543 Bacteria 5637
111 Ga0495599_0010858 3300046678 Bacteria 5582
112 Ga0495624_0033086 3300046690 Bacteria 3349
113 Ga0495581_0084977 3300047315 Bacteria 1834
114 Ga0496122_0011788 3300048925 Bacteria 8799
115 Ga0496123_0002669 3300048926 Bacteria 21505
116 Ga0496124_0000422 3300048927 Bacteria 75716
117 Ga0496124_0029708 3300048927 Bacteria 4863
118 Ga0496125_0000573 3300048928 Bacteria 63002
119 Ga0496125_0000927 3300048928 Bacteria 46047
120 Ga0496125_0003928 3300048928 Bacteria 17537
121 Ga0496125_0005138 3300048928 Bacteria 14721
122 Ga0496126_0176193 3300048929 Bacteria 1819
123 Ga0501033_0059100 3300049570 Bacteria 2831
124 Ga0501047_0000194 3300049581 Bacteria 73576
125 Ga0501047_0237468 3300049581 Bacteria 1674
126 Ga0501080_0026415 3300049742 Bacteria 5395
127 Ga0501080_0063298 3300049742 Bacteria 3443
128 Ga0501035_0039032 3300049822 Bacteria 4298
129 Ga0501044_0204741 3300049823 Bacteria 1930
130 nmdc:mga03683_10786_c1 3300050489 Bacteria 3284
131 nmdc:mga03n38_28949_c1 3300050490 Bacteria 2314
132 nmdc:mga03n38_48620_c1 3300050490 Bacteria 1882
133 nmdc:mga03n38_56115_c1 3300050490 Bacteria 1777
134 nmdc:mga00v17_24237_c1 3300050491 Bacteria 3518
135 nmdc:mga00v17_9424_c1 3300050491 Bacteria 5283
136 nmdc:mga0yw44_63380_c1 3300050492 Bacteria 2273
137 nmdc:mga06z11_38303_c1 3300050494 Bacteria 2380
138 nmdc:mga06z11_74386_c1 3300050494 Bacteria 1806
139 2512734617 2512564039 Bacteria 8739048
140 2524186363 2524023129 Bacteria 6762600
141 2556063165 2554235469 Bacteria 3590176
142 2587738088 2585428059 Bacteria 8696589
143 2643739976 2643221543 Bacteria 6628015
144 2644421439 2643221676 Bacteria 8119172
145 2712199595 2711768088 Bacteria 3195027
146 2793182965 2791355222 Bacteria 5898266
147 2819670184 2818991459 Bacteria 8736032
148 2857456936 2857453340 Bacteria 8090534
149 2864734134 2864733723 Bacteria 6770668
150 2864997602 2864997549 Bacteria 5139696
151 2885526948 2885526491 Bacteria 7164189
152 2889050018 2889049205 Bacteria 7524325
153 2889296415 2889295896 Bacteria 4704906
154 2904165473 2904162308 Bacteria 7086713
155 2904491684 2904490793 Bacteria 7046938
156 2904756925 2904755435 Bacteria 7986759
157 2919430954 2919425241 Bacteria 8055701
158 2929210359 2929206907 Bacteria 5918291
159 2929298503 2929297113 Bacteria 3141306
160 2939681397 2939679117 Bacteria 6921672
161 2971411737 2971410472 Bacteria 8311090
162 2981284880 2981284811 Bacteria 4641497
163 2981289824 2981289755 Bacteria 4641509
164 2981981538 2981980479 Bacteria 4641628
165 2981986434 2981985349 Bacteria 4641497
166 3001894968 3001892409 Bacteria 6328293
167 8046997899 8046991243 Bacteria 8497463
168 8056539710 8056533031 Bacteria 8964429
169 8057474028 8057473075 Bacteria 5892720
170 8057737865 8057733483 Bacteria 6578323
171 Ga0453684_0023351
172 Ga0070658_10054429
173 Ga0070714_100042518
174 Ga0070681_10072146
175 Ga0070681_10201519
176 Ga0070706_100013148
177 Ga0070679_100127674
178 Ga0070686_100002520
179 Ga0070704_100021386
180 Ga0068856_100116417
181 Ga0068859_100095838
182 Ga0075365_10003679
183 Ga0075365_10005803
184 Ga0075365_10009320
185 Ga0075368_10005149
186 Ga0075368_10017061
187 Ga0075363_100001980
188 Ga0075364_10009666
189 Ga0075362_10010168
190 Ga0075367_10010528
191 Ga0075367_10054056
192 Ga0097620_100095840
193 Ga0105244_10018279
194 Ga0105240_10063961
195 Ga0105240_10143214
196 Ga0105242_10118821
197 Ga0105238_10005098
198 Ga0105238_10044236
199 Ga0105239_10009621
200 Ga0157370_10008284
201 Ga0213876_10060546
202 Ga0209675_1008242
203 Ga0209025_1006560
204 Ga0207655_1026316
205 Ga0207707_10015730
206 Ga0207695_10051563
207 Ga0207695_10288474
208 Ga0207646_10077023
209 Ga0207694_10005130
210 Ga0207664_10016351
211 Ga0207667_10227050
212 Ga0265337_1000378
213 Ga0265337_1002684
214 Ga0265326_10007234
215 Ga0265334_10009427
216 Ga0265322_10019719
217 Ga0265338_10000036
218 Ga0265338_10000145
219 Ga0265338_10000248
220 Ga0265338_10000336
221 Ga0265338_10000879
222 Ga0265338_10001270
223 Ga0265338_10002302
224 Ga0265338_10004657
225 Ga0265338_10004880
226 Ga0265338_10006080
227 Ga0265338_10010559
228 Ga0265338_10015854
229 Ga0265338_10023867
230 Ga0265338_10035124
231 Ga0265324_10001771
232 Ga0265324_10003111
233 Ga0265324_10010401
234 Ga0265324_10010536
235 Ga0265324_10024308
236 Ga0265332_10010873
237 Ga0265332_10031610
238 Ga0265328_10027550
239 Ga0265320_10000229
240 Ga0265320_10010631
241 Ga0265320_10014482
242 Ga0265320_10018776
243 Ga0265325_10015409
244 Ga0265329_10001669
245 Ga0265340_10003765
246 Ga0265339_10004674
247 Ga0265339_10010171
248 Ga0265327_10000926
249 Ga0265316_10007538
250 Ga0265316_10058779
251 Ga0265313_10024600
252 Ga0265314_10000037
253 Ga0265314_10047004
254 Ga0373927_0014271
255 Ga0373925_0016259
256 Ga0436364_0870860
257 Ga0400490_38515
258 Ga0400490_48417
259 Ga0436365_1074703
260 Ga0436365_1123896
261 Ga0451577_0000967
262 Ga0453684_0001577
263 Ga0453684_0008107
264 Ga0453684_0015724
265 Ga0453684_0037308
266 Ga0453684_0111757
267 Ga0466960_0033165
268 Ga0451576_0003815
269 Ga0451576_0131765
270 Ga0495592_0000315
271 Ga0495664_0014917
272 Ga0495618_0003460
273 Ga0495628_0000127
274 Ga0495630_0001483
275 Ga0495630_0017535
276 Ga0495666_0004615
277 Ga0495652_0212730
278 Ga0495640_0009874
279 Ga0495586_0001992
280 Ga0495645_0014255
281 Ga0495599_0010858
282 Ga0495624_0033086
283 Ga0495581_0084977
284 Ga0496122_0011788
285 Ga0496123_0002669
286 Ga0496124_0000422
287 Ga0496124_0029708
288 Ga0496125_0000573
289 Ga0496125_0000927
290 Ga0496125_0003928
291 Ga0496125_0005138
292 Ga0496126_0176193
293 Ga0501033_0059100
294 Ga0501047_0000194
295 Ga0501047_0237468
296 Ga0501080_0026415
297 Ga0501080_0063298
298 Ga0501035_0039032
299 Ga0501044_0204741
300 nmdc:mga03683_10786_c1
301 nmdc:mga03n38_28949_c1
302 nmdc:mga03n38_48620_c1
303 nmdc:mga03n38_56115_c1
304 nmdc:mga00v17_24237_c1
305 nmdc:mga00v17_9424_c1
306 nmdc:mga0yw44_63380_c1
307 nmdc:mga06z11_38303_c1
308 nmdc:mga06z11_74386_c1
309 2512734617
310 2524186363
311 2556063165
312 2587738088
313 2643739976
314 2644421439
315 2712199595
316 2793182965
317 2819670184
318 2857456936
319 2864734134
320 2864997602
321 2885526948
322 2889050018
323 2889296415
324 2904165473
325 2904491684
326 2904756925
327 2919430954
328 2929210359
329 2929298503
330 2939681397
331 2971411737
332 2981284880
333 2981289824
334 2981981538
335 2981986434
336 3001894968
337 8046997899
338 8056539710
339 8057474028
340 8057737865

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00006

ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

159

368

0.99

PF18269

T3SS_ATPase_C

T3SS EscN ATPase C-terminal domain

375

446

0.98

PF02874

ATP-synt_ab_N

ATP synthase alpha/beta family, beta-barrel domain

37

102

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dpy-assembly2.cif.gz_B crystal structure of the flagellar type iii atpase flii 0.9645 27 424
2dpy-assembly1.cif.gz_A crystal structure of the flagellar type iii atpase flii 0.9553 27 428
6njp-assembly1.cif.gz_F structure of the assembled atpase escn in complex with its central stalk esco from the enteropathogenic e. coli (epec) type iii secretion system 0.9489 26 426
2obm-assembly1.cif.gz_A structural and biochemical analysis of a prototypical atpase from the type iii secretion system of pathogenic bacteria 0.9466 83 426
4nph-assembly1.cif.gz_A crystal structure of ssan from salmonella enterica 0.9462 84 426
ID Description Score Start End Superfamily
2dpyB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9786 83 346 3.40.50.300
4nphA02 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2; 0.967 353 426 1.20.1270.330
af_A0A0R0JZ78_6_157_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9582 211 347 3.40.50.300
2dpyB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9572 83 346 3.40.50.300
2dpyA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9553 27 428 3.40.50.12240
ID Description Score Start End GO Terms
AF-A0A3C0ASQ7-F1-model_v4 EscN/YscN/HrcN family type III secretion system ATPase 0.9888 115 245 GO:0005524
GO:0045261
GO:0046933
AF-A0A5X9U015-F1-model_v4 FliI/YscN family ATPase 0.9877 128 425 GO:0005524
GO:0005737
GO:0016887
GO:0030254
GO:0030257
GO:0045261
GO:0046933
GO:0046961
AF-A0A357D4L8-F1-model_v4 EscN/YscN/HrcN family type III secretion system ATPase 0.9872 170 319 GO:0005524
GO:0045261
GO:0046933
AF-A0A2X2DQV5-F1-model_v4 deleted 0.9862 134 424
AF-A0A257LJ18-F1-model_v4 EscN/YscN/HrcN family type III secretion system ATPase 0.9855 327 425 GO:0005524

Map