F257022

General Info

Members Datasets Scaffolds Average Seq Length
170 96 340 412

Family's Representative Sequence

Representative Sequence 3300030521|Ga0307511_10005688|Ga0307511_1000568813
Length 453
Sequence VRWCHERLVRWRTSPVGRVLELGRCVARMCSWPAQTPVPWGGNILIYCGIDWAEKTHDVALVDDSGELRAKRHITDDAAGYKHLLDLLAEYGDTEETPIPVAIETSRGLLVAVLRTGKRQVFAINPLAAARYRDRHSVSRKKSDPGDALVLANILRTDMHAHRPLPNDSDLARAIAVLARAQQDATWNRQQMANQLRSLLREYYPAALDAFATWQNGLCRPEARELLKAAPTPGRAAKLTRPQIAGALKRAGRKRGIEAEVERIREVFRSDFAHQPPLLEDALGQQMLALLGQLEAACVATDDLAKAVEEAFPQHPDADVILSFPGLGTQLGARVLAEIGDDRTRFDHARGLKAYAGSSPITRTSGKKSSITRRWVKNDRLNHVGYLWAFSAITASPGAEAHYRRRRDEHGDWHAAAQRNLFNRMIGQLYHCLQKHELFDEQTAFPTQLAAAA

Samples

Sample ID Description Type Environment
1 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
2 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
3 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
4 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
5 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
6 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
7 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
8 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
9 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
10 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
11 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
12 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
13 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
14 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
15 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
16 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
17 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
18 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
19 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
20 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
21 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
22 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
23 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
24 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
25 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
26 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
27 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
28 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
29 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
30 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
31 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
32 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
33 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
34 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
35 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
36 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
37 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
38 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
39 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
40 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
41 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
42 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
43 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
44 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
45 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
46 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
47 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
48 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
49 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
50 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
51 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
52 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
53 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
54 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
55 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
56 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
57 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
58 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
59 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
60 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
61 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
62 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
63 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
64 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
77 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
78 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
83 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
84 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
85 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
86 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
87 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
88 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
89 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
90 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
91 2862574272 Streptomyces sp. AcE210 Isolate Nodule
92 2867428634 Streptomyces sp. RP5T Isolate Unclassified
93 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
94 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
95 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
96 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90
Metatranscriptomes 0
Isolates 10

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.76
Nodule 1.18
Rhizoplane 0
Rhizosphere 88.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307511_10005688 3300030521 Bacteria 12636
2 Ga0068853_100021732 3300005539 Bacteria 5353
3 Ga0075431_100060588 3300006847 Bacteria 3905
4 Ga0182007_10008131 3300015262 Bacteria 4329
5 Ga0209758_1008988 3300025297 Bacteria 6318
6 Ga0207688_10061361 3300025901 Bacteria 2119
7 Ga0207694_10086177 3300025924 Bacteria 2473
8 Ga0207639_10026549 3300026041 Bacteria 4209
9 Ga0307511_10006679 3300030521 Bacteria 11624
10 Ga0307511_10048735 3300030521 Bacteria 3442
11 Ga0307509_10005115 3300031507 Bacteria 18439
12 Ga0307514_10135804 3300031649 Bacteria 1684
13 Ga0307516_10114534 3300031730 Bacteria 2494
14 Ga0307510_10114820 3300033180 Bacteria 2420
15 Ga0395898_0001728 3300037466 Bacteria 28892
16 Ga0395898_0031001 3300037466 Bacteria 5347
17 Ga0451853_0187254 3300041512 Bacteria 5001
18 Ga0466969_0033599 3300044656 Bacteria 2604
19 Ga0466966_0021102 3300044684 Bacteria 4278
20 Ga0466961_0171615 3300044693 Bacteria 1349
21 Ga0466963_0123260 3300044694 Bacteria 1785
22 Ga0466971_0018365 3300044719 Bacteria 3097
23 Ga0466967_0094432 3300045976 Bacteria 2724
24 Ga0495617_008345 3300046452 Bacteria 3573
25 Ga0495603_0003489 3300046455 Bacteria 9354
26 Ga0495590_0025819 3300046457 Bacteria 2064
27 Ga0495629_0015536 3300046459 Bacteria 5466
28 Ga0495629_0071610 3300046459 Bacteria 2419
29 Ga0495629_0134524 3300046459 Bacteria 1721
30 Ga0495638_0087751 3300046460 Bacteria 1879
31 Ga0495653_0097687 3300046463 Bacteria 2133
32 Ga0495605_0023650 3300046474 Bacteria 3227
33 Ga0495662_0025240 3300046476 Bacteria 2869
34 Ga0495585_0006875 3300046492 Bacteria 7013
35 Ga0495585_0022301 3300046492 Bacteria 3635
36 Ga0495585_0024882 3300046492 Bacteria 3432
37 Ga0495594_0001391 3300046499 Bacteria 12551
38 Ga0495594_0016277 3300046499 Bacteria 3916
39 Ga0495594_0073986 3300046499 Bacteria 1897
40 Ga0495607_0060350 3300046501 Bacteria 2159
41 Ga0495583_0014203 3300046506 Bacteria 4405
42 Ga0495583_0023619 3300046506 Bacteria 3107
43 Ga0495606_0094787 3300046507 Bacteria 1828
44 Ga0495606_0098436 3300046507 Bacteria 1784
45 Ga0495616_0042459 3300046513 Bacteria 2315
46 Ga0495616_0092279 3300046513 Bacteria 1432
47 Ga0495620_0002580 3300046515 Bacteria 10476
48 Ga0495620_0010343 3300046515 Bacteria 4924
49 Ga0495620_0013251 3300046515 Bacteria 4227
50 Ga0495620_0027146 3300046515 Bacteria 2683
51 Ga0495631_0018693 3300046518 Bacteria 3259
52 Ga0495643_0003802 3300046522 Bacteria 10909
53 Ga0495643_0114787 3300046522 Bacteria 1366
54 Ga0495648_0025949 3300046524 Bacteria 3956
55 Ga0495648_0039364 3300046524 Bacteria 3009
56 Ga0495666_0019432 3300046526 Bacteria 3371
57 Ga0495666_0048109 3300046526 Bacteria 2054
58 Ga0495666_0062019 3300046526 Bacteria 1786
59 Ga0495622_0001081 3300046557 Bacteria 14264
60 Ga0495667_0086274 3300046559 Bacteria 2036
61 Ga0495668_0002504 3300046616 Bacteria 15023
62 Ga0495668_0031116 3300046616 Bacteria 3008
63 Ga0495668_0034572 3300046616 Bacteria 2834
64 Ga0495668_0046061 3300046616 Bacteria 2423
65 Ga0495668_0068852 3300046616 Bacteria 1946
66 Ga0495668_0070456 3300046616 Bacteria 1922
67 Ga0495634_0081982 3300046642 Bacteria 2109
68 Ga0495634_0092970 3300046642 Bacteria 1956
69 Ga0495611_0010868 3300046648 Bacteria 3856
70 Ga0495611_0038457 3300046648 Bacteria 2128
71 Ga0495611_0129289 3300046648 Bacteria 1178
72 Ga0495625_0002595 3300046660 Bacteria 19332
73 Ga0495625_0008070 3300046660 Bacteria 9028
74 Ga0495625_0010163 3300046660 Bacteria 7815
75 Ga0495625_0076117 3300046660 Bacteria 2347
76 Ga0495625_0079878 3300046660 Bacteria 2279
77 Ga0495657_0002471 3300046675 Bacteria 15555
78 Ga0495657_0092518 3300046675 Bacteria 1937
79 Ga0495613_0031098 3300046689 Bacteria 3965
80 Ga0495613_0045889 3300046689 Bacteria 3231
81 Ga0495613_0083497 3300046689 Bacteria 2319
82 Ga0495613_0122209 3300046689 Bacteria 1869
83 Ga0495624_0034953 3300046690 Bacteria 3247
84 Ga0495624_0164822 3300046690 Bacteria 1353
85 Ga0495649_0003237 3300046694 Bacteria 11107
86 Ga0495589_0014266 3300046794 Bacteria 4094
87 Ga0495589_0021120 3300046794 Bacteria 3327
88 Ga0495589_0023193 3300046794 Bacteria 3163
89 Ga0495589_0026412 3300046794 Bacteria 2941
90 Ga0495589_0027533 3300046794 Bacteria 2874
91 Ga0495589_0040278 3300046794 Bacteria 2333
92 Ga0495589_0065880 3300046794 Bacteria 1775
93 Ga0495660_0001994 3300046810 Bacteria 13286
94 Ga0495660_0020505 3300046810 Bacteria 3788
95 Ga0495581_0052918 3300047315 Bacteria 2345
96 Ga0495604_0085204 3300047317 Bacteria 2358
97 Ga0495636_0024337 3300047318 Bacteria 2455
98 Ga0495636_0026632 3300047318 Bacteria 2352
99 Ga0495672_0093703 3300047320 Bacteria 1644
100 Ga0495676_0002473 3300047321 Bacteria 16435
101 Ga0495676_0089592 3300047321 Bacteria 2304
102 Ga0495683_0014278 3300047323 Bacteria 4138
103 Ga0495683_0023704 3300047323 Bacteria 3153
104 Ga0495683_0033343 3300047323 Bacteria 2620
105 Ga0495683_0094078 3300047323 Bacteria 1448
106 Ga0495687_003289 3300047443 Bacteria 11888
107 Ga0495687_008944 3300047443 Bacteria 5665
108 Ga0495687_017036 3300047443 Bacteria 3639
109 Ga0495687_026711 3300047443 Bacteria 2712
110 Ga0495687_032367 3300047443 Bacteria 2388
111 Ga0495687_036936 3300047443 Bacteria 2180
112 Ga0495687_053115 3300047443 Bacteria 1708
113 Ga0495687_059753 3300047443 Bacteria 1575
114 Ga0495685_008460 3300047447 Bacteria 3419
115 Ga0495685_021346 3300047447 Bacteria 2228
116 Ga0495685_035766 3300047447 Bacteria 1706
117 Ga0495681_0023199 3300047470 Bacteria 3301
118 Ga0495593_0010593 3300047673 Bacteria 5318
119 Ga0495614_0023213 3300048089 Bacteria 2676
120 Ga0495678_046003 3300049459 Bacteria 1718
121 Ga0501031_0063802 3300049568 Bacteria 2399
122 Ga0501032_0045077 3300049569 Bacteria 2983
123 Ga0501032_0061297 3300049569 Bacteria 2522
124 Ga0501033_0137563 3300049570 Bacteria 1767
125 Ga0501033_0148290 3300049570 Bacteria 1693
126 Ga0501034_0116700 3300049571 Bacteria 2657
127 Ga0501034_0153773 3300049571 Bacteria 2275
128 Ga0501036_0180778 3300049572 Bacteria 1775
129 Ga0501037_0050680 3300049573 Bacteria 3037
130 Ga0501037_0092800 3300049573 Bacteria 2183
131 Ga0501038_0091969 3300049574 Bacteria 2540
132 Ga0501039_0150334 3300049575 Bacteria 1829
133 Ga0501043_0132960 3300049579 Bacteria 1949
134 Ga0501046_0044481 3300049580 Bacteria 3531
135 Ga0501046_0100975 3300049580 Bacteria 2213
136 Ga0501047_0077236 3300049581 Bacteria 3204
137 Ga0501047_0078923 3300049581 Bacteria 3165
138 Ga0501047_0218268 3300049581 Bacteria 1763
139 Ga0501048_0106131 3300049582 Bacteria 1982
140 Ga0501069_0106840 3300049585 Bacteria 1591
141 Ga0501074_0127172 3300049590 Bacteria 1823
142 Ga0501080_0193509 3300049742 Bacteria 1868
143 Ga0501035_0001415 3300049822 Bacteria 24600
144 Ga0501035_0008786 3300049822 Bacteria 9407
145 Ga0501035_0074687 3300049822 Bacteria 2998
146 Ga0501044_0030153 3300049823 Bacteria 5717
147 Ga0501044_0033253 3300049823 Bacteria 5420
148 Ga0501044_0070725 3300049823 Bacteria 3549
149 Ga0501044_0170352 3300049823 Bacteria 2149
150 Ga0501044_0229271 3300049823 Bacteria 1805
151 nmdc:mga06r32_271962_c1 3300050510 Bacteria 1682
152 Ga0500600_0035813 3300053149 Bacteria 2890
153 Ga0500616_0065219 3300053153 Bacteria 1873
154 2616701927 2616644814 Bacteria 11555299
155 2616905414 2616644941 Bacteria 8510691
156 2644016236 2643221601 Bacteria 7493239
157 2644178543 2643221631 Bacteria 8168043
158 2786675957 2786546132 Bacteria 10419719
159 2862284181 2862281513 Bacteria 9621493
160 2862510814 2862507626 Bacteria 9425308
161 2862577011 2862574272 Bacteria 10567477
162 2862582423 2862574272 Bacteria 10567477
163 2867428682 2867428634 Bacteria 9590268
164 2867433705 2867428634 Bacteria 9590268
165 2919476249 2919468124 Bacteria 9133025
166 2947225088 2947224130 Bacteria 9938529
167 2947233119 2947224130 Bacteria 9938529
168 2954701383 2954691527 Bacteria 10720516
169 2954703818 2954701450 Bacteria 10834262
170 2954705993 2954701450 Bacteria 10834262
171 Ga0307511_10005688
172 Ga0068853_100021732
173 Ga0075431_100060588
174 Ga0182007_10008131
175 Ga0209758_1008988
176 Ga0207688_10061361
177 Ga0207694_10086177
178 Ga0207639_10026549
179 Ga0307511_10006679
180 Ga0307511_10048735
181 Ga0307509_10005115
182 Ga0307514_10135804
183 Ga0307516_10114534
184 Ga0307510_10114820
185 Ga0395898_0001728
186 Ga0395898_0031001
187 Ga0451853_0187254
188 Ga0466969_0033599
189 Ga0466966_0021102
190 Ga0466961_0171615
191 Ga0466963_0123260
192 Ga0466971_0018365
193 Ga0466967_0094432
194 Ga0495617_008345
195 Ga0495603_0003489
196 Ga0495590_0025819
197 Ga0495629_0015536
198 Ga0495629_0071610
199 Ga0495629_0134524
200 Ga0495638_0087751
201 Ga0495653_0097687
202 Ga0495605_0023650
203 Ga0495662_0025240
204 Ga0495585_0006875
205 Ga0495585_0022301
206 Ga0495585_0024882
207 Ga0495594_0001391
208 Ga0495594_0016277
209 Ga0495594_0073986
210 Ga0495607_0060350
211 Ga0495583_0014203
212 Ga0495583_0023619
213 Ga0495606_0094787
214 Ga0495606_0098436
215 Ga0495616_0042459
216 Ga0495616_0092279
217 Ga0495620_0002580
218 Ga0495620_0010343
219 Ga0495620_0013251
220 Ga0495620_0027146
221 Ga0495631_0018693
222 Ga0495643_0003802
223 Ga0495643_0114787
224 Ga0495648_0025949
225 Ga0495648_0039364
226 Ga0495666_0019432
227 Ga0495666_0048109
228 Ga0495666_0062019
229 Ga0495622_0001081
230 Ga0495667_0086274
231 Ga0495668_0002504
232 Ga0495668_0031116
233 Ga0495668_0034572
234 Ga0495668_0046061
235 Ga0495668_0068852
236 Ga0495668_0070456
237 Ga0495634_0081982
238 Ga0495634_0092970
239 Ga0495611_0010868
240 Ga0495611_0038457
241 Ga0495611_0129289
242 Ga0495625_0002595
243 Ga0495625_0008070
244 Ga0495625_0010163
245 Ga0495625_0076117
246 Ga0495625_0079878
247 Ga0495657_0002471
248 Ga0495657_0092518
249 Ga0495613_0031098
250 Ga0495613_0045889
251 Ga0495613_0083497
252 Ga0495613_0122209
253 Ga0495624_0034953
254 Ga0495624_0164822
255 Ga0495649_0003237
256 Ga0495589_0014266
257 Ga0495589_0021120
258 Ga0495589_0023193
259 Ga0495589_0026412
260 Ga0495589_0027533
261 Ga0495589_0040278
262 Ga0495589_0065880
263 Ga0495660_0001994
264 Ga0495660_0020505
265 Ga0495581_0052918
266 Ga0495604_0085204
267 Ga0495636_0024337
268 Ga0495636_0026632
269 Ga0495672_0093703
270 Ga0495676_0002473
271 Ga0495676_0089592
272 Ga0495683_0014278
273 Ga0495683_0023704
274 Ga0495683_0033343
275 Ga0495683_0094078
276 Ga0495687_003289
277 Ga0495687_008944
278 Ga0495687_017036
279 Ga0495687_026711
280 Ga0495687_032367
281 Ga0495687_036936
282 Ga0495687_053115
283 Ga0495687_059753
284 Ga0495685_008460
285 Ga0495685_021346
286 Ga0495685_035766
287 Ga0495681_0023199
288 Ga0495593_0010593
289 Ga0495614_0023213
290 Ga0495678_046003
291 Ga0501031_0063802
292 Ga0501032_0045077
293 Ga0501032_0061297
294 Ga0501033_0137563
295 Ga0501033_0148290
296 Ga0501034_0116700
297 Ga0501034_0153773
298 Ga0501036_0180778
299 Ga0501037_0050680
300 Ga0501037_0092800
301 Ga0501038_0091969
302 Ga0501039_0150334
303 Ga0501043_0132960
304 Ga0501046_0044481
305 Ga0501046_0100975
306 Ga0501047_0077236
307 Ga0501047_0078923
308 Ga0501047_0218268
309 Ga0501048_0106131
310 Ga0501069_0106840
311 Ga0501074_0127172
312 Ga0501080_0193509
313 Ga0501035_0001415
314 Ga0501035_0008786
315 Ga0501035_0074687
316 Ga0501044_0030153
317 Ga0501044_0033253
318 Ga0501044_0070725
319 Ga0501044_0170352
320 Ga0501044_0229271
321 nmdc:mga06r32_271962_c1
322 Ga0500600_0035813
323 Ga0500616_0065219
324 2616701927
325 2616905414
326 2644016236
327 2644178543
328 2786675957
329 2862284181
330 2862510814
331 2862577011
332 2862582423
333 2867428682
334 2867433705
335 2919476249
336 2947225088
337 2947233119
338 2954701383
339 2954703818
340 2954705993

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02371

Transposase_20

Transposase IS116/IS110/IS902 family

318

404

0.94

PF01548

DEDD_Tnp_IS110

Transposase

48

205

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6j9e-assembly1.cif.gz_J cryo-em structure of xanthomonos oryzae transcription elongation complex with nusa and the bacteriophage protein p7 0.7772 2 51
3hrg-assembly1.cif.gz_A crystal structure of bacteroides thetaiotaomicron bt_3980, protein with actin-like atpase fold and unknown function (np_812891.1) from bacteroides thetaiotaomicron vpi-5482 at 1.85 a resolution 0.7644 2 83
3ll3-assembly1.cif.gz_B the crystal structure of ligand bound xylulose kinase from lactobacillus acidophilus 0.7226 1 61
7t1g-assembly1.cif.gz_A crystal structure of cab1 pantothenate kinase from saccharomyces cerevisiae in complex with compound yu385595 0.7208 2 92
3htv-assembly1.cif.gz_A-2 crystal structure of d-allose kinase (np_418508.1) from escherichia coli k12 at 1.95 a resolution 0.7205 2 60
ID Description Score Start End Superfamily
af_O07182_4_158_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8448 6 159 3.30.420.10
af_O07182_4_158_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8204 6 159 3.30.420.10
af_A0A1D6G5P2_19_183_1.10.287.4070 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8198 128 270 1.10.287.4070
af_D3ZI68_74_215_1.10.287.4070 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.783 126 270 1.10.287.4070
af_A4I8M9_69_204_1.10.287.4070 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7695 123 268 1.10.287.4070
ID Description Score Start End GO Terms
AF-A0A4P7STR1-F1-model_v4 Transposase IS110-like N-terminal domain-containing protein 0.9681 1 116 GO:0003677
GO:0004803
GO:0006313
AF-A0A6N4WCH1-F1-model_v4 Transposase IS110-like N-terminal domain-containing protein 0.9664 108 307 GO:0003677
GO:0004803
GO:0006313
AF-A0A7I7W8Y7-F1-model_v4 deleted 0.963 1 325
AF-A0A4Z0N2Z9-F1-model_v4 IS110 family transposase 0.96 1 76 GO:0003677
GO:0004803
GO:0006313
AF-A0A239LVT7-F1-model_v4 Transposase 0.9585 2 281 GO:0003677
GO:0004803
GO:0006313

Map