F255966

General Info

Members Datasets Scaffolds Average Seq Length
170 124 340 135

Family's Representative Sequence

Representative Sequence 3300005290|Ga0065712_10069415|Ga0065712_100694155
Length 144
Sequence VILVDTSVWIEVFRSPSTLHLESLVDFDDIVTCLPVVQEVLQGFNSEPAYVRARESMLALPIVDSPIGQQRFVEAVDLYRMARRQGLTIRSGVDCLIAASAIRHQLDVLHRDRDFDALTRVSPLSARNVAAGSRRLPPKGGSHR

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
47 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
74 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
77 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
78 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
79 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
80 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
81 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
84 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
90 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
91 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
92 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
97 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
105 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
106 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
115 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
118 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
119 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
120 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
121 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
122 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
123 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.82
Metatranscriptomes 1.18
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.82
Rhizosphere 91.18
Stem 0
Stem Tuber 0
Unclassified 21.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10069415 3300005290 Bacteria 7343
2 Ga0065704_10453395 3300005289 Bacteria 703
3 Ga0065715_10251804 3300005293 Bacteria 1156
4 Ga0065715_10656292 3300005293 Bacteria 676
5 Ga0070658_10843964 3300005327 Unclassified 796
6 Ga0070683_100000562 3300005329 Bacteria 26413
7 Ga0070670_100011083 3300005331 Bacteria 7702
8 Ga0070680_100013373 3300005336 Bacteria 6391
9 Ga0070661_100018912 3300005344 Bacteria 4905
10 Ga0070669_100564095 3300005353 Bacteria 950
11 Ga0070675_100000023 3300005354 Bacteria 122380
12 Ga0070671_100045927 3300005355 Bacteria 3632
13 Ga0070673_100201515 3300005364 Bacteria 1714
14 Ga0070673_101311067 3300005364 Unclassified 680
15 Ga0070673_101851472 3300005364 Unclassified 572
16 Ga0070708_100905859 3300005445 Bacteria 828
17 Ga0070663_100742442 3300005455 Unclassified 837
18 Ga0070662_100304963 3300005457 Bacteria 1295
19 Ga0070707_100015494 3300005468 Bacteria 7154
20 Ga0070698_100269234 3300005471 Bacteria 1635
21 Ga0070698_100309590 3300005471 Bacteria 1510
22 Ga0070699_100304434 3300005518 Bacteria 1430
23 Ga0070699_100866060 3300005518 Bacteria 827
24 Ga0070699_100872435 3300005518 Bacteria 824
25 Ga0070679_100009026 3300005530 Bacteria 9404
26 Ga0070684_100001300 3300005535 Bacteria 17889
27 Ga0070672_100152830 3300005543 Bacteria 1910
28 Ga0070693_100488421 3300005547 Bacteria 871
29 Ga0070664_100000081 3300005564 Bacteria 60323
30 Ga0068864_100063289 3300005618 Bacteria 3206
31 Ga0068863_100447878 3300005841 Unclassified 1267
32 Ga0068862_100859935 3300005844 Bacteria 889
33 Ga0081455_10069586 3300005937 Bacteria 2926
34 Ga0075428_100000091 3300006844 Bacteria 74305
35 Ga0075428_101129291 3300006844 Bacteria 827
36 Ga0075430_100042804 3300006846 Bacteria 3829
37 Ga0075430_100066227 3300006846 Bacteria 3033
38 Ga0075431_100571726 3300006847 Unclassified 1116
39 Ga0075431_100607238 3300006847 Bacteria 1077
40 Ga0075434_100132942 3300006871 Bacteria 2507
41 Ga0075434_100524974 3300006871 Bacteria 1204
42 Ga0075434_101191571 3300006871 Bacteria 774
43 Ga0075429_100726169 3300006880 Unclassified 870
44 Ga0075435_100702131 3300007076 Unclassified 879
45 Ga0105244_10007608 3300009036 Bacteria 6866
46 Ga0111539_10003580 3300009094 Bacteria 20471
47 Ga0111539_10102361 3300009094 Bacteria 3361
48 Ga0111539_10629515 3300009094 Unclassified 1249
49 Ga0111539_11427296 3300009094 Unclassified 803
50 Ga0111539_11795411 3300009094 Unclassified 711
51 Ga0105245_10350184 3300009098 Bacteria 1463
52 Ga0105245_12095373 3300009098 Unclassified 619
53 Ga0114129_10002992 3300009147 Bacteria 23660
54 Ga0114129_11475724 3300009147 Unclassified 836
55 Ga0105243_12144637 3300009148 Unclassified 595
56 Ga0105248_10011954 3300009177 Bacteria 9573
57 Ga0105248_10569623 3300009177 Bacteria 1278
58 Ga0105249_10004758 3300009553 Bacteria 11710
59 Ga0105249_10273336 3300009553 Bacteria 1684
60 Ga0105249_10713650 3300009553 Bacteria 1063
61 Ga0105239_10639465 3300010375 Bacteria 1215
62 Ga0105239_11206184 3300010375 Unclassified 872
63 Ga0157378_11501101 3300013297 Unclassified 718
64 Ga0163162_10647134 3300013306 Bacteria 1181
65 Ga0163163_10024426 3300014325 Bacteria 5753
66 Ga0157377_10843151 3300014745 Bacteria 680
67 Ga0157379_11107198 3300014968 Bacteria 759
68 Ga0207697_10032378 3300025315 Bacteria 2140
69 Ga0207655_1101276 3300025728 Bacteria 991
70 Ga0207645_10780991 3300025907 Archaea 649
71 Ga0207705_10435494 3300025909 Bacteria 1016
72 Ga0207660_10006588 3300025917 Bacteria 7539
73 Ga0207649_10244594 3300025920 Bacteria 1289
74 Ga0207652_10010660 3300025921 Bacteria 7403
75 Ga0207646_10011778 3300025922 Bacteria 8447
76 Ga0207681_10905856 3300025923 Unclassified 739
77 Ga0207650_10244397 3300025925 Bacteria 1451
78 Ga0207659_10000009 3300025926 Bacteria 308304
79 Ga0207687_10532972 3300025927 Bacteria 983
80 Ga0207690_10211094 3300025932 Bacteria 1480
81 Ga0207706_10142856 3300025933 Bacteria 2105
82 Ga0207691_10406569 3300025940 Bacteria 1161
83 Ga0207691_10590963 3300025940 Bacteria 940
84 Ga0207689_11511685 3300025942 Bacteria 561
85 Ga0207661_10012271 3300025944 Bacteria 6223
86 Ga0207679_10001830 3300025945 Bacteria 13232
87 Ga0207651_10418075 3300025960 Bacteria 1144
88 Ga0207712_10675489 3300025961 Unclassified 899
89 Ga0207712_10703228 3300025961 Bacteria 882
90 Ga0207641_10181096 3300026088 Bacteria 1930
91 Ga0207676_10107720 3300026095 Bacteria 2325
92 Ga0207675_101520883 3300026118 Unclassified 690
93 Ga0207428_10029079 3300027907 Bacteria 4584
94 Ga0268265_11116622 3300028380 Bacteria 783
95 Ga0265326_10008156 3300028558 Unclassified 3171
96 Ga0265323_10002909 3300028653 Bacteria 7673
97 Ga0265323_10025993 3300028653 Bacteria 2210
98 Ga0265322_10036074 3300028654 Bacteria 1408
99 Ga0265322_10131606 3300028654 Unclassified 713
100 Ga0265338_10084687 3300028800 Bacteria 2645
101 Ga0265338_10107167 3300028800 Bacteria 2260
102 Ga0265330_10017837 3300031235 Bacteria 3266
103 Ga0265332_10152668 3300031238 Unclassified 966
104 Ga0265328_10213970 3300031239 Unclassified 733
105 Ga0265320_10128658 3300031240 Bacteria 1151
106 Ga0265329_10000482 3300031242 Bacteria 20700
107 Ga0265329_10008384 3300031242 Bacteria 3923
108 Ga0265329_10024716 3300031242 Bacteria 1993
109 Ga0265329_10062496 3300031242 Unclassified 1179
110 Ga0265340_10081336 3300031247 Bacteria 1525
111 Ga0265339_10009537 3300031249 Bacteria 6089
112 Ga0265316_10000990 3300031344 Bacteria 30830
113 Ga0265316_10007656 3300031344 Archaea 10133
114 Ga0265316_10065503 3300031344 Bacteria 2813
115 Ga0265316_10442174 3300031344 Unclassified 933
116 Ga0316575_10043472 3300031665 Bacteria 1781
117 Ga0265314_10014249 3300031711 Bacteria 6374
118 Ga0265314_10041719 3300031711 Bacteria 3281
119 Ga0265342_10000836 3300031712 Bacteria 30810
120 Ga0265342_10002392 3300031712 Bacteria 16258
121 Ga0265342_10029814 3300031712 Plasmid 3384
122 Ga0265342_10223922 3300031712 Unclassified 1012
123 Ga0316576_10391706 3300031727 Bacteria 1030
124 Ga0307409_101539705 3300031995 Unclassified 693
125 Ga0316583_10205825 3300032133 Unclassified 683
126 Ga0316593_10171373 3300032168 Unclassified 795
127 Ga0316592_1046005 3300033524 Bacteria 972
128 Ga0316574_0028749 3300035398 Bacteria 3354
129 Ga0373947_0241075 3300035725 Bacteria 1193
130 Ga0316582_0093715 3300036647 Unclassified 1981
131 Ga0316584_0136987 3300036712 Bacteria 1827
132 Ga0316584_0230911 3300036712 Bacteria 1356
133 Ga0316584_0326316 3300036712 Bacteria 1106
134 Ga0316584_0748903 3300036712 Bacteria 667
135 Ga0316584_1012153 3300036712 Bacteria 555
136 Ga0439433_0187466 3300041999 Bacteria 543
137 Ga0450923_025211 3300042125 Unclassified 1184
138 Ga0496102_0081922 3300048905 Unclassified 2976
139 Ga0496102_1229097 3300048905 Bacteria 669
140 Ga0496104_0389216 3300048907 Bacteria 1306
141 Ga0496105_0023278 3300048908 Bacteria 5022
142 Ga0496106_0496368 3300048909 Unclassified 980
143 Ga0496108_0002217 3300048911 Bacteria 15556
144 Ga0496108_0239476 3300048911 Bacteria 1578
145 Ga0496109_0037317 3300048912 Bacteria 4390
146 Ga0496110_0004268 3300048913 Bacteria 11060
147 Ga0496111_0082284 3300048914 Bacteria 2351
148 Ga0496111_0657937 3300048914 Unclassified 764
149 Ga0496112_0000499 3300048915 Bacteria 26499
150 Ga0496112_0172854 3300048915 Bacteria 2126
151 Ga0496113_0301854 3300048916 Bacteria 1282
152 Ga0496114_0647012 3300048917 Bacteria 930
153 Ga0501040_0564504 3300049576 Bacteria 822
154 Ga0501041_0223431 3300049577 Archaea 1182
155 Ga0501042_0379784 3300049578 Bacteria 1023
156 Ga0501068_0210742 3300049584 Bacteria 1234
157 Ga0501076_0143691 3300049592 Bacteria 1939
158 Ga0501081_0464475 3300049743 Bacteria 941
159 Ga0501045_0183835 3300049824 Bacteria 1558
160 Ga0501045_0966648 3300049824 Unclassified 625
161 nmdc:mga05p37_34_c1 3300050507 Bacteria 111954
162 nmdc:mga0qj67_49228_c1 3300050509 Bacteria 3331
163 nmdc:mga06r32_166916_c1 3300050510 Bacteria 2184
164 nmdc:mga08y16_17136_c1 3300050511 Bacteria 7627
165 nmdc:mga08y16_399989_c1 3300050511 Bacteria 1406
166 nmdc:mga0n895_211537_c1 3300050512 Bacteria 1969
167 nmdc:mga0rr50_661645_c1 3300050513 Bacteria 891
168 nmdc:mga08x19_997874_c1 3300050514 Unclassified 595
169 Ga0501084_0929416 3300054114 Archaea 731
170 Ga0501082_0628715 3300060353 Bacteria 939
171 Ga0065712_10069415
172 Ga0065704_10453395
173 Ga0065715_10251804
174 Ga0065715_10656292
175 Ga0070658_10843964
176 Ga0070683_100000562
177 Ga0070670_100011083
178 Ga0070680_100013373
179 Ga0070661_100018912
180 Ga0070669_100564095
181 Ga0070675_100000023
182 Ga0070671_100045927
183 Ga0070673_100201515
184 Ga0070673_101311067
185 Ga0070673_101851472
186 Ga0070708_100905859
187 Ga0070663_100742442
188 Ga0070662_100304963
189 Ga0070707_100015494
190 Ga0070698_100269234
191 Ga0070698_100309590
192 Ga0070699_100304434
193 Ga0070699_100866060
194 Ga0070699_100872435
195 Ga0070679_100009026
196 Ga0070684_100001300
197 Ga0070672_100152830
198 Ga0070693_100488421
199 Ga0070664_100000081
200 Ga0068864_100063289
201 Ga0068863_100447878
202 Ga0068862_100859935
203 Ga0081455_10069586
204 Ga0075428_100000091
205 Ga0075428_101129291
206 Ga0075430_100042804
207 Ga0075430_100066227
208 Ga0075431_100571726
209 Ga0075431_100607238
210 Ga0075434_100132942
211 Ga0075434_100524974
212 Ga0075434_101191571
213 Ga0075429_100726169
214 Ga0075435_100702131
215 Ga0105244_10007608
216 Ga0111539_10003580
217 Ga0111539_10102361
218 Ga0111539_10629515
219 Ga0111539_11427296
220 Ga0111539_11795411
221 Ga0105245_10350184
222 Ga0105245_12095373
223 Ga0114129_10002992
224 Ga0114129_11475724
225 Ga0105243_12144637
226 Ga0105248_10011954
227 Ga0105248_10569623
228 Ga0105249_10004758
229 Ga0105249_10273336
230 Ga0105249_10713650
231 Ga0105239_10639465
232 Ga0105239_11206184
233 Ga0157378_11501101
234 Ga0163162_10647134
235 Ga0163163_10024426
236 Ga0157377_10843151
237 Ga0157379_11107198
238 Ga0207697_10032378
239 Ga0207655_1101276
240 Ga0207645_10780991
241 Ga0207705_10435494
242 Ga0207660_10006588
243 Ga0207649_10244594
244 Ga0207652_10010660
245 Ga0207646_10011778
246 Ga0207681_10905856
247 Ga0207650_10244397
248 Ga0207659_10000009
249 Ga0207687_10532972
250 Ga0207690_10211094
251 Ga0207706_10142856
252 Ga0207691_10406569
253 Ga0207691_10590963
254 Ga0207689_11511685
255 Ga0207661_10012271
256 Ga0207679_10001830
257 Ga0207651_10418075
258 Ga0207712_10675489
259 Ga0207712_10703228
260 Ga0207641_10181096
261 Ga0207676_10107720
262 Ga0207675_101520883
263 Ga0207428_10029079
264 Ga0268265_11116622
265 Ga0265326_10008156
266 Ga0265323_10002909
267 Ga0265323_10025993
268 Ga0265322_10036074
269 Ga0265322_10131606
270 Ga0265338_10084687
271 Ga0265338_10107167
272 Ga0265330_10017837
273 Ga0265332_10152668
274 Ga0265328_10213970
275 Ga0265320_10128658
276 Ga0265329_10000482
277 Ga0265329_10008384
278 Ga0265329_10024716
279 Ga0265329_10062496
280 Ga0265340_10081336
281 Ga0265339_10009537
282 Ga0265316_10000990
283 Ga0265316_10007656
284 Ga0265316_10065503
285 Ga0265316_10442174
286 Ga0316575_10043472
287 Ga0265314_10014249
288 Ga0265314_10041719
289 Ga0265342_10000836
290 Ga0265342_10002392
291 Ga0265342_10029814
292 Ga0265342_10223922
293 Ga0316576_10391706
294 Ga0307409_101539705
295 Ga0316583_10205825
296 Ga0316593_10171373
297 Ga0316592_1046005
298 Ga0316574_0028749
299 Ga0373947_0241075
300 Ga0316582_0093715
301 Ga0316584_0136987
302 Ga0316584_0230911
303 Ga0316584_0326316
304 Ga0316584_0748903
305 Ga0316584_1012153
306 Ga0439433_0187466
307 Ga0450923_025211
308 Ga0496102_0081922
309 Ga0496102_1229097
310 Ga0496104_0389216
311 Ga0496105_0023278
312 Ga0496106_0496368
313 Ga0496108_0002217
314 Ga0496108_0239476
315 Ga0496109_0037317
316 Ga0496110_0004268
317 Ga0496111_0082284
318 Ga0496111_0657937
319 Ga0496112_0000499
320 Ga0496112_0172854
321 Ga0496113_0301854
322 Ga0496114_0647012
323 Ga0501040_0564504
324 Ga0501041_0223431
325 Ga0501042_0379784
326 Ga0501068_0210742
327 Ga0501076_0143691
328 Ga0501081_0464475
329 Ga0501045_0183835
330 Ga0501045_0966648
331 nmdc:mga05p37_34_c1
332 nmdc:mga0qj67_49228_c1
333 nmdc:mga06r32_166916_c1
334 nmdc:mga08y16_17136_c1
335 nmdc:mga08y16_399989_c1
336 nmdc:mga0n895_211537_c1
337 nmdc:mga0rr50_661645_c1
338 nmdc:mga08x19_997874_c1
339 Ga0501084_0929416
340 Ga0501082_0628715

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

2

121

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6a7v-assembly1.cif.gz_E crystal structure of mycobacterium tuberculosis vapbc11 toxin-antitoxin complex 0.883 2 128
4chg-assembly3.cif.gz_E crystal structure of vapbc15 complex from mycobacterium tuberculosis 0.8696 1 129
6a7v-assembly1.cif.gz_E crystal structure of mycobacterium tuberculosis vapbc11 toxin-antitoxin complex 0.8635 2 128
4chg-assembly3.cif.gz_E crystal structure of vapbc15 complex from mycobacterium tuberculosis 0.8633 1 129
5sv2-assembly1.cif.gz_A-2 toxin vapc21 from mycobacterium tuberculosis 0.8278 2 128
ID Description Score Start End Superfamily
af_P9WFA5_1_133_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8876 1 129 3.40.50.1010
af_P9WFA5_1_133_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8811 1 129 3.40.50.1010
af_P9WFB5_2_126_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8809 31 129 3.40.50.1010
af_L0T5V6_2_136_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8656 2 128 3.40.50.1010
4chgB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8404 3 129 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A534X2Q2-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9961 1 129 GO:0000287
GO:0004540
GO:0090729
AF-A0A7V8IVZ6-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9954 1 129 GO:0000287
GO:0004540
GO:0090729
AF-A0A661NY41-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9941 1 129 GO:0000287
GO:0004540
GO:0090729
AF-A0A7V2XUM3-F1-model_v4 PIN domain-containing protein 0.9902 66 129
AF-A0A534X2Q2-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9885 1 129 GO:0000287
GO:0004540
GO:0090729

Map