F254397
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 169 | 123 | 167 | 385 |
Family's Representative Sequence
| Representative Sequence | 3300005844|Ga0068862_100131024|Ga0068862_1001310242 |
| Length | 418 |
| Sequence | MLSRRFGCCQGPASLPARDDRPRPGVLRYGRLRPRPDAPAAKGRPLALSAPWFDETELARVREALAGRTSGDGPFGRRVEARLAEALGVPRVLLTTSCTHALELALLALGIGPGQEVICPSFTFVSTANAVLRVGASPVLADIEETTLGLDAADTEARLTPRTAAILPVHYAGFAADMDGLLDLARRRGLKVVEDAAQGLGASFRGTPLGALGDAGCFSFHETKNVTCGEGGAIALRDRAVAERAEIIREKGTNRAAFLRGEVDKYTWVAEGSSYVLSDVLAAILDAQLDKQDRIGSRRAEIAARYRRGLAHWAAAGGVRLPAQSPDRVTNDHIFHLIFPSEEARDACQGALRREGIGATFHYVPLHSSPFGRRLPGTRGAFPVSERIAGGLLRLPMHPLLEDADVDRVIEAVTARPA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2545555834 | Methylobacterium sp. WSM2598 | Isolate | Nodule |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 6 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 16 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 18 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 21 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 22 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 25 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 26 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 27 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 29 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 30 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 31 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 32 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 33 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 34 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 35 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 36 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 37 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 38 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 40 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 41 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 42 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 43 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 44 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 45 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 46 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 48 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 86 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 89 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 90 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 91 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 92 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 93 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 94 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 95 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 96 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 103 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 104 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 106 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 107 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 108 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 111 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 113 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 114 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 115 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 120 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 121 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 123 | 641522639 | Methylobacterium sp. 4-46 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.82 |
| Metatranscriptomes | 0 |
| Isolates | 1.18 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0.59 |
| Nodule | 1.18 |
| Rhizoplane | 1.78 |
| Rhizosphere | 96.45 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070658_10011715 | 3300005327 | Bacteria | 7035 |
| 2 | Ga0070670_100118512 | 3300005331 | Bacteria | 2283 |
| 3 | Ga0070677_10000022 | 3300005333 | Bacteria | 45355 |
| 4 | Ga0068869_100042334 | 3300005334 | Bacteria | 3264 |
| 5 | Ga0070691_10001247 | 3300005341 | Bacteria | 10734 |
| 6 | Ga0070687_100057719 | 3300005343 | Bacteria | 2037 |
| 7 | Ga0070661_100000004 | 3300005344 | Bacteria | 243876 |
| 8 | Ga0070669_100010636 | 3300005353 | Bacteria | 6532 |
| 9 | Ga0070673_100006311 | 3300005364 | Bacteria | 7700 |
| 10 | Ga0070714_100006801 | 3300005435 | Bacteria | 8864 |
| 11 | Ga0070700_100001844 | 3300005441 | Bacteria | 10694 |
| 12 | Ga0070694_100024519 | 3300005444 | Bacteria | 3893 |
| 13 | Ga0070694_100121484 | 3300005444 | Bacteria | 1875 |
| 14 | Ga0070708_100036477 | 3300005445 | Bacteria | 4288 |
| 15 | Ga0068867_100038158 | 3300005459 | Bacteria | 3497 |
| 16 | Ga0070706_100014125 | 3300005467 | Bacteria | 7378 |
| 17 | Ga0070707_100038037 | 3300005468 | Bacteria | 4595 |
| 18 | Ga0070698_100002068 | 3300005471 | Bacteria | 22295 |
| 19 | Ga0070699_100009261 | 3300005518 | Bacteria | 8529 |
| 20 | Ga0068853_100045712 | 3300005539 | Bacteria | 3751 |
| 21 | Ga0070695_100009612 | 3300005545 | Bacteria | 5759 |
| 22 | Ga0070696_100014179 | 3300005546 | Bacteria | 5348 |
| 23 | Ga0070665_100275774 | 3300005548 | Bacteria | 1683 |
| 24 | Ga0070704_100017669 | 3300005549 | Bacteria | 4542 |
| 25 | Ga0070704_100018197 | 3300005549 | Bacteria | 4486 |
| 26 | Ga0070704_100033756 | 3300005549 | Bacteria | 3463 |
| 27 | Ga0068855_100301836 | 3300005563 | Bacteria | 1773 |
| 28 | Ga0068854_100000062 | 3300005578 | Bacteria | 78159 |
| 29 | Ga0070702_100003555 | 3300005615 | Bacteria | 6988 |
| 30 | Ga0068852_100000022 | 3300005616 | Bacteria | 125196 |
| 31 | Ga0068859_100043462 | 3300005617 | Bacteria | 4515 |
| 32 | Ga0068859_100346527 | 3300005617 | Bacteria | 1580 |
| 33 | Ga0068864_100219642 | 3300005618 | Bacteria | 1753 |
| 34 | Ga0068866_10070975 | 3300005718 | Bacteria | 1840 |
| 35 | Ga0068861_100014310 | 3300005719 | Bacteria | 5564 |
| 36 | Ga0068861_100020064 | 3300005719 | Bacteria | 4781 |
| 37 | Ga0068861_100078509 | 3300005719 | Bacteria | 2578 |
| 38 | Ga0068861_100243694 | 3300005719 | Bacteria | 1530 |
| 39 | Ga0068851_10000514 | 3300005834 | Bacteria | 16947 |
| 40 | Ga0068858_100018710 | 3300005842 | Bacteria | 6483 |
| 41 | Ga0068862_100101620 | 3300005844 | Bacteria | 2515 |
| 42 | Ga0068862_100131024 | 3300005844 | Bacteria | 2218 |
| 43 | Ga0081539_10007454 | 3300005985 | Bacteria | 9971 |
| 44 | Ga0070712_100000545 | 3300006175 | Bacteria | 21755 |
| 45 | Ga0097621_100001825 | 3300006237 | Bacteria | 14590 |
| 46 | Ga0097621_100102815 | 3300006237 | Bacteria | 2406 |
| 47 | Ga0075428_100015197 | 3300006844 | Bacteria | 8539 |
| 48 | Ga0075428_100016082 | 3300006844 | Bacteria | 8272 |
| 49 | Ga0075428_100036961 | 3300006844 | Bacteria | 5378 |
| 50 | Ga0075428_100084167 | 3300006844 | Bacteria | 3470 |
| 51 | Ga0075431_100126316 | 3300006847 | Bacteria | 2639 |
| 52 | Ga0075433_10050533 | 3300006852 | Bacteria | 3620 |
| 53 | Ga0075434_100006980 | 3300006871 | Bacteria | 10410 |
| 54 | Ga0075434_100141525 | 3300006871 | Bacteria | 2426 |
| 55 | Ga0075429_100028467 | 3300006880 | Bacteria | 4851 |
| 56 | Ga0075429_100149189 | 3300006880 | Bacteria | 2047 |
| 57 | Ga0068865_100000290 | 3300006881 | Bacteria | 27584 |
| 58 | Ga0075436_100055203 | 3300006914 | Bacteria | 2743 |
| 59 | Ga0097620_100043465 | 3300006931 | Bacteria | 4515 |
| 60 | Ga0097620_100346500 | 3300006931 | Bacteria | 1580 |
| 61 | Ga0075435_100092630 | 3300007076 | Bacteria | 2496 |
| 62 | Ga0111539_10013565 | 3300009094 | Bacteria | 10187 |
| 63 | Ga0111539_10014767 | 3300009094 | Bacteria | 9741 |
| 64 | Ga0111539_10016876 | 3300009094 | Bacteria | 9042 |
| 65 | Ga0111539_10069799 | 3300009094 | Bacteria | 4148 |
| 66 | Ga0111539_10299315 | 3300009094 | Bacteria | 1872 |
| 67 | Ga0105245_10000023 | 3300009098 | Bacteria | 180844 |
| 68 | Ga0114129_10000353 | 3300009147 | Bacteria | 53286 |
| 69 | Ga0114129_10006702 | 3300009147 | Bacteria | 16355 |
| 70 | Ga0105243_10022351 | 3300009148 | Bacteria | 4806 |
| 71 | Ga0105242_10142725 | 3300009176 | Bacteria | 2080 |
| 72 | Ga0105237_10258755 | 3300009545 | Bacteria | 1743 |
| 73 | Ga0157374_10131693 | 3300013296 | Bacteria | 2420 |
| 74 | Ga0157378_10001301 | 3300013297 | Bacteria | 22448 |
| 75 | Ga0157378_10140829 | 3300013297 | Bacteria | 2240 |
| 76 | Ga0157379_10022946 | 3300014968 | Bacteria | 5532 |
| 77 | Ga0157376_10005371 | 3300014969 | Bacteria | 8953 |
| 78 | Ga0157376_10028624 | 3300014969 | Unclassified | 4430 |
| 79 | Ga0157376_10031241 | 3300014969 | Bacteria | 4262 |
| 80 | Ga0207656_10000111 | 3300025321 | Bacteria | 31159 |
| 81 | Ga0207682_10000005 | 3300025893 | Bacteria | 95617 |
| 82 | Ga0207705_10031372 | 3300025909 | Bacteria | 3793 |
| 83 | Ga0207684_10023261 | 3300025910 | Bacteria | 5292 |
| 84 | Ga0207684_10054893 | 3300025910 | Bacteria | 3380 |
| 85 | Ga0207671_10198729 | 3300025914 | Bacteria | 1565 |
| 86 | Ga0207693_10002243 | 3300025915 | Bacteria | 16824 |
| 87 | Ga0207649_10000003 | 3300025920 | Bacteria | 388908 |
| 88 | Ga0207646_10014294 | 3300025922 | Bacteria | 7546 |
| 89 | Ga0207646_10195657 | 3300025922 | Bacteria | 1826 |
| 90 | Ga0207681_10014633 | 3300025923 | Bacteria | 4883 |
| 91 | Ga0207681_10039911 | 3300025923 | Bacteria | 3120 |
| 92 | Ga0207650_10192811 | 3300025925 | Unclassified | 1629 |
| 93 | Ga0207687_10000015 | 3300025927 | Bacteria | 261701 |
| 94 | Ga0207664_10029013 | 3300025929 | Bacteria | 4212 |
| 95 | Ga0207706_10023614 | 3300025933 | Bacteria | 5522 |
| 96 | Ga0207686_10010324 | 3300025934 | Bacteria | 5082 |
| 97 | Ga0207686_10094993 | 3300025934 | Bacteria | 1977 |
| 98 | Ga0207709_10096471 | 3300025935 | Bacteria | 1945 |
| 99 | Ga0207704_10000084 | 3300025938 | Bacteria | 55496 |
| 100 | Ga0207689_10031785 | 3300025942 | Bacteria | 4390 |
| 101 | Ga0207661_10000372 | 3300025944 | Bacteria | 28801 |
| 102 | Ga0207661_10000966 | 3300025944 | Bacteria | 18937 |
| 103 | Ga0207651_10028571 | 3300025960 | Bacteria | 3520 |
| 104 | Ga0207640_10000074 | 3300025981 | Bacteria | 78164 |
| 105 | Ga0207703_10014030 | 3300026035 | Bacteria | 6245 |
| 106 | Ga0207708_10006432 | 3300026075 | Bacteria | 8706 |
| 107 | Ga0207648_10011790 | 3300026089 | Bacteria | 8214 |
| 108 | Ga0207676_10211522 | 3300026095 | Bacteria | 1721 |
| 109 | Ga0207674_10032951 | 3300026116 | Bacteria | 5429 |
| 110 | Ga0207675_100019714 | 3300026118 | Bacteria | 6295 |
| 111 | Ga0207675_100033675 | 3300026118 | Bacteria | 4774 |
| 112 | Ga0207675_100067250 | 3300026118 | Bacteria | 3349 |
| 113 | Ga0207698_10000043 | 3300026142 | Bacteria | 96553 |
| 114 | Ga0207428_10008900 | 3300027907 | Bacteria | 9043 |
| 115 | Ga0207428_10124996 | 3300027907 | Bacteria | 1970 |
| 116 | Ga0268266_10003902 | 3300028379 | Bacteria | 14505 |
| 117 | Ga0268265_10036306 | 3300028380 | Bacteria | 3609 |
| 118 | Ga0268265_10095950 | 3300028380 | Bacteria | 2382 |
| 119 | Ga0265327_10010499 | 3300031251 | Bacteria | 6502 |
| 120 | Ga0316576_10000582 | 3300031727 | Bacteria | 17387 |
| 121 | Ga0316578_10001538 | 3300031728 | Bacteria | 9483 |
| 122 | Ga0316577_10001208 | 3300031733 | Bacteria | 11977 |
| 123 | Ga0316582_0006233 | 3300036647 | Bacteria | 6238 |
| 124 | Ga0316584_0001675 | 3300036712 | Bacteria | 13540 |
| 125 | Ga0466963_0022479 | 3300044694 | Bacteria | 3994 |
| 126 | Ga0451576_0006822 | 3300045051 | Bacteria | 13870 |
| 127 | Ga0451576_0022489 | 3300045051 | Bacteria | 6836 |
| 128 | Ga0451576_0055222 | 3300045051 | Bacteria | 4156 |
| 129 | Ga0495629_0000817 | 3300046459 | Bacteria | 25230 |
| 130 | Ga0495606_0000017 | 3300046507 | Bacteria | 284549 |
| 131 | Ga0495669_0000033 | 3300046684 | Bacteria | 98629 |
| 132 | Ga0495624_0000127 | 3300046690 | Bacteria | 53463 |
| 133 | Ga0495604_0000152 | 3300047317 | Bacteria | 60239 |
| 134 | Ga0495672_0022728 | 3300047320 | Bacteria | 4070 |
| 135 | Ga0496114_0036506 | 3300048917 | Bacteria | 4063 |
| 136 | Ga0496114_0066332 | 3300048917 | Bacteria | 3026 |
| 137 | Ga0496115_0179579 | 3300048918 | Bacteria | 1750 |
| 138 | Ga0501036_0311467 | 3300049572 | Bacteria | 1316 |
| 139 | Ga0501048_0054028 | 3300049582 | Bacteria | 2854 |
| 140 | Ga0501071_0034219 | 3300049587 | Bacteria | 3615 |
| 141 | Ga0501072_0027528 | 3300049588 | Bacteria | 4435 |
| 142 | Ga0501072_0131862 | 3300049588 | Bacteria | 1992 |
| 143 | Ga0501075_0192613 | 3300049591 | Bacteria | 1555 |
| 144 | Ga0501075_0272417 | 3300049591 | Bacteria | 1290 |
| 145 | Ga0501079_0013620 | 3300049741 | Bacteria | 6202 |
| 146 | Ga0501079_0054766 | 3300049741 | Bacteria | 3077 |
| 147 | Ga0501081_0035199 | 3300049743 | Bacteria | 3408 |
| 148 | Ga0501045_0146384 | 3300049824 | Bacteria | 1757 |
| 149 | nmdc:mga05p37_188127_c1 | 3300050507 | Bacteria | 2509 |
| 150 | nmdc:mga05p37_3006_c1 | 3300050507 | Bacteria | 19572 |
| 151 | nmdc:mga05p37_471929_c1 | 3300050507 | Bacteria | 1447 |
| 152 | nmdc:mga09592_309833_c1 | 3300050508 | Bacteria | 1368 |
| 153 | nmdc:mga06r32_141201_c1 | 3300050510 | Bacteria | 2385 |
| 154 | nmdc:mga08y16_152010_c1 | 3300050511 | Bacteria | 2406 |
| 155 | nmdc:mga08y16_245048_c1 | 3300050511 | Bacteria | 1852 |
| 156 | nmdc:mga0n895_221804_c1 | 3300050512 | Bacteria | 1919 |
| 157 | nmdc:mga0n895_525227_c1 | 3300050512 | Bacteria | 1191 |
| 158 | nmdc:mga0n895_59153_c1 | 3300050512 | Bacteria | 3781 |
| 159 | nmdc:mga0n895_94990_c1 | 3300050512 | Bacteria | 2986 |
| 160 | nmdc:mga0rr50_117537_c1 | 3300050513 | Bacteria | 2112 |
| 161 | nmdc:mga0a205_119539_c1 | 3300050515 | Bacteria | 2534 |
| 162 | nmdc:mga0a205_6084_c1 | 3300050515 | Bacteria | 10886 |
| 163 | Ga0500616_0078511 | 3300053153 | Unclassified | 1664 |
| 164 | Ga0501084_0099937 | 3300054114 | Bacteria | 2436 |
| 165 | Ga0501082_0058813 | 3300060353 | Bacteria | 3312 |
| 166 | Ga0501082_0175968 | 3300060353 | Bacteria | 1861 |
| 167 | Ga0530510_0050749 | 3300061734 | Bacteria | 2997 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005844 | Ga0068862_100101620 | Ga0068862_1001016203 | 339 |
| 2 | 3300028380 | Ga0268265_10036306 | Ga0268265_100363062 | 339 |
| 3 | 3300050512 | nmdc:mga0n895_221804_c1 | nmdc:mga0n895_221804_c1_51_1076 | 340 |
| 4 | 3300006880 | Ga0075429_100149189 | Ga0075429_1001491891 | 349 |
| 5 | 3300050508 | nmdc:mga09592_309833_c1 | nmdc:mga09592_309833_c1_147_1196 | 349 |
| 6 | 3300005341 | Ga0070691_10001247 | Ga0070691_100012472 | 360 |
| 7 | 3300005343 | Ga0070687_100057719 | Ga0070687_1000577192 | 360 |
| 8 | 3300005441 | Ga0070700_100001844 | Ga0070700_1000018447 | 360 |
| 9 | 3300005444 | Ga0070694_100024519 | Ga0070694_1000245192 | 360 |
| 10 | 3300005459 | Ga0068867_100038158 | Ga0068867_1000381583 | 360 |
| 11 | 3300005549 | Ga0070704_100018197 | Ga0070704_1000181973 | 360 |
| 12 | 3300005615 | Ga0070702_100003555 | Ga0070702_1000035552 | 360 |
| 13 | 3300005719 | Ga0068861_100020064 | Ga0068861_1000200645 | 360 |
| 14 | 3300006844 | Ga0075428_100016082 | Ga0075428_1000160822 | 360 |
| 15 | 3300006880 | Ga0075429_100028467 | Ga0075429_1000284674 | 360 |
| 16 | 3300009148 | Ga0105243_10022351 | Ga0105243_100223513 | 360 |
| 17 | 3300025923 | Ga0207681_10039911 | Ga0207681_100399112 | 360 |
| 18 | 3300025935 | Ga0207709_10096471 | Ga0207709_100964712 | 360 |
| 19 | 3300026075 | Ga0207708_10006432 | Ga0207708_100064325 | 360 |
| 20 | 3300026089 | Ga0207648_10011790 | Ga0207648_100117902 | 360 |
| 21 | 3300026118 | Ga0207675_100033675 | Ga0207675_1000336755 | 360 |
| 22 | 3300031728 | Ga0316578_10001538 | Ga0316578_100015386 | 360 |
| 23 | 3300031733 | Ga0316577_10001208 | Ga0316577_100012085 | 360 |
| 24 | 3300005435 | Ga0070714_100006801 | Ga0070714_1000068014 | 361 |
| 25 | 3300025929 | Ga0207664_10029013 | Ga0207664_100290132 | 361 |
| 26 | 3300005563 | Ga0068855_100301836 | Ga0068855_1003018362 | 367 |
| 27 | 3300048917 | Ga0496114_0036506 | Ga0496114_0036506_2649_3845 | 368 |
| 28 | 3300014969 | Ga0157376_10028624 | Ga0157376_100286243 | 369 |
| 29 | 3300054114 | Ga0501084_0099937 | Ga0501084_0099937_439_1548 | 369 |
| 30 | 3300049582 | Ga0501048_0054028 | Ga0501048_0054028_461_1612 | 371 |
| 31 | 3300049587 | Ga0501071_0034219 | Ga0501071_0034219_454_1605 | 371 |
| 32 | 3300049588 | Ga0501072_0131862 | Ga0501072_0131862_815_1966 | 371 |
| 33 | 3300049741 | Ga0501079_0013620 | Ga0501079_0013620_160_1311 | 371 |
| 34 | 3300049824 | Ga0501045_0146384 | Ga0501045_0146384_571_1722 | 371 |
| 35 | 3300060353 | Ga0501082_0058813 | Ga0501082_0058813_52_1203 | 371 |
| 36 | 3300061734 | Ga0530510_0050749 | Ga0530510_0050749_261_1412 | 371 |
| 37 | 3300047317 | Ga0495604_0000152 | Ga0495604_0000152_29184_30332 | 372 |
| 38 | 3300005545 | Ga0070695_100009612 | Ga0070695_1000096122 | 373 |
| 39 | 3300049572 | Ga0501036_0311467 | Ga0501036_0311467_61_1197 | 373 |
| 40 | 3300049588 | Ga0501072_0027528 | Ga0501072_0027528_1263_2399 | 373 |
| 41 | 3300049591 | Ga0501075_0272417 | Ga0501075_0272417_109_1251 | 373 |
| 42 | 3300049741 | Ga0501079_0054766 | Ga0501079_0054766_1059_2195 | 373 |
| 43 | 3300049743 | Ga0501081_0035199 | Ga0501081_0035199_1117_2253 | 373 |
| 44 | 3300005334 | Ga0068869_100042334 | Ga0068869_1000423344 | 374 |
| 45 | 3300005364 | Ga0070673_100006311 | Ga0070673_1000063115 | 374 |
| 46 | 3300005445 | Ga0070708_100036477 | Ga0070708_1000364774 | 374 |
| 47 | 3300005467 | Ga0070706_100014125 | Ga0070706_1000141254 | 374 |
| 48 | 3300005468 | Ga0070707_100038037 | Ga0070707_1000380374 | 374 |
| 49 | 3300005471 | Ga0070698_100002068 | Ga0070698_1000020687 | 374 |
| 50 | 3300005518 | Ga0070699_100009261 | Ga0070699_1000092615 | 374 |
| 51 | 3300005549 | Ga0070704_100033756 | Ga0070704_1000337564 | 374 |
| 52 | 3300005617 | Ga0068859_100043462 | Ga0068859_1000434624 | 374 |
| 53 | 3300005617 | Ga0068859_100346527 | Ga0068859_1003465271 | 374 |
| 54 | 3300005719 | Ga0068861_100078509 | Ga0068861_1000785092 | 374 |
| 55 | 3300005719 | Ga0068861_100243694 | Ga0068861_1002436941 | 374 |
| 56 | 3300005844 | Ga0068862_100131024 | Ga0068862_1001310242 | 374 |
| 57 | 3300006844 | Ga0075428_100036961 | Ga0075428_1000369614 | 374 |
| 58 | 3300006844 | Ga0075428_100084167 | Ga0075428_1000841674 | 374 |
| 59 | 3300006847 | Ga0075431_100126316 | Ga0075431_1001263162 | 374 |
| 60 | 3300006871 | Ga0075434_100141525 | Ga0075434_1001415251 | 374 |
| 61 | 3300006914 | Ga0075436_100055203 | Ga0075436_1000552032 | 374 |
| 62 | 3300006931 | Ga0097620_100043465 | Ga0097620_1000434654 | 374 |
| 63 | 3300006931 | Ga0097620_100346500 | Ga0097620_1003465001 | 374 |
| 64 | 3300007076 | Ga0075435_100092630 | Ga0075435_1000926302 | 374 |
| 65 | 3300009094 | Ga0111539_10013565 | Ga0111539_100135656 | 374 |
| 66 | 3300009094 | Ga0111539_10069799 | Ga0111539_100697994 | 374 |
| 67 | 3300009094 | Ga0111539_10299315 | Ga0111539_102993152 | 374 |
| 68 | 3300009147 | Ga0114129_10000353 | Ga0114129_1000035343 | 374 |
| 69 | 3300025910 | Ga0207684_10023261 | Ga0207684_100232612 | 374 |
| 70 | 3300025910 | Ga0207684_10054893 | Ga0207684_100548934 | 374 |
| 71 | 3300025922 | Ga0207646_10014294 | Ga0207646_100142946 | 374 |
| 72 | 3300025922 | Ga0207646_10195657 | Ga0207646_101956572 | 374 |
| 73 | 3300025942 | Ga0207689_10031785 | Ga0207689_100317852 | 374 |
| 74 | 3300025960 | Ga0207651_10028571 | Ga0207651_100285712 | 374 |
| 75 | 3300026116 | Ga0207674_10032951 | Ga0207674_100329512 | 374 |
| 76 | 3300027907 | Ga0207428_10008900 | Ga0207428_100089003 | 374 |
| 77 | 3300027907 | Ga0207428_10124996 | Ga0207428_101249962 | 374 |
| 78 | 3300049591 | Ga0501075_0192613 | Ga0501075_0192613_117_1262 | 374 |
| 79 | 3300050507 | nmdc:mga05p37_188127_c1 | nmdc:mga05p37_188127_c1_1248_2381 | 374 |
| 80 | 3300050507 | nmdc:mga05p37_3006_c1 | nmdc:mga05p37_3006_c1_14418_15584 | 374 |
| 81 | 3300050507 | nmdc:mga05p37_471929_c1 | nmdc:mga05p37_471929_c1_10_1143 | 374 |
| 82 | 3300050510 | nmdc:mga06r32_141201_c1 | nmdc:mga06r32_141201_c1_359_1492 | 374 |
| 83 | 3300050511 | nmdc:mga08y16_245048_c1 | nmdc:mga08y16_245048_c1_536_1702 | 374 |
| 84 | 3300050512 | nmdc:mga0n895_525227_c1 | nmdc:mga0n895_525227_c1_35_1168 | 374 |
| 85 | 3300050512 | nmdc:mga0n895_59153_c1 | nmdc:mga0n895_59153_c1_1500_2663 | 374 |
| 86 | 3300050513 | nmdc:mga0rr50_117537_c1 | nmdc:mga0rr50_117537_c1_472_1635 | 374 |
| 87 | 3300050515 | nmdc:mga0a205_6084_c1 | nmdc:mga0a205_6084_c1_9076_10239 | 374 |
| 88 | 3300053153 | Ga0500616_0078511 | Ga0500616_0078511_229_1353 | 374 |
| 89 | 3300060353 | Ga0501082_0175968 | Ga0501082_0175968_385_1530 | 374 |
| 90 | 3300005444 | Ga0070694_100121484 | Ga0070694_1001214842 | 375 |
| 91 | 3300005549 | Ga0070704_100017669 | Ga0070704_1000176694 | 375 |
| 92 | 3300006844 | Ga0075428_100015197 | Ga0075428_1000151977 | 375 |
| 93 | 3300009094 | Ga0111539_10014767 | Ga0111539_1001476712 | 375 |
| 94 | 3300009094 | Ga0111539_10016876 | Ga0111539_100168768 | 375 |
| 95 | 3300013297 | Ga0157378_10140829 | Ga0157378_101408292 | 375 |
| 96 | 3300047320 | Ga0495672_0022728 | Ga0495672_0022728_1043_2182 | 375 |
| 97 | 3300050511 | nmdc:mga08y16_152010_c1 | nmdc:mga08y16_152010_c1_1071_2264 | 375 |
| 98 | iso_pu_bacteria | 2545555834 | 2545673924 | 375 |
| 99 | iso_pu_bacteria | 641522639 | 641641886 | 375 |
| 100 | 3300005353 | Ga0070669_100010636 | Ga0070669_1000106366 | 376 |
| 101 | 3300005546 | Ga0070696_100014179 | Ga0070696_1000141792 | 376 |
| 102 | 3300005548 | Ga0070665_100275774 | Ga0070665_1002757742 | 376 |
| 103 | 3300005618 | Ga0068864_100219642 | Ga0068864_1002196422 | 376 |
| 104 | 3300005718 | Ga0068866_10070975 | Ga0068866_100709752 | 376 |
| 105 | 3300005719 | Ga0068861_100014310 | Ga0068861_1000143102 | 376 |
| 106 | 3300005842 | Ga0068858_100018710 | Ga0068858_1000187103 | 376 |
| 107 | 3300005985 | Ga0081539_10007454 | Ga0081539_100074548 | 376 |
| 108 | 3300006237 | Ga0097621_100001825 | Ga0097621_1000018259 | 376 |
| 109 | 3300006237 | Ga0097621_100102815 | Ga0097621_1001028152 | 376 |
| 110 | 3300006852 | Ga0075433_10050533 | Ga0075433_100505333 | 376 |
| 111 | 3300006871 | Ga0075434_100006980 | Ga0075434_1000069805 | 376 |
| 112 | 3300006881 | Ga0068865_100000290 | Ga0068865_10000029015 | 376 |
| 113 | 3300009147 | Ga0114129_10006702 | Ga0114129_100067026 | 376 |
| 114 | 3300009176 | Ga0105242_10142725 | Ga0105242_101427252 | 376 |
| 115 | 3300009545 | Ga0105237_10258755 | Ga0105237_102587552 | 376 |
| 116 | 3300013296 | Ga0157374_10131693 | Ga0157374_101316932 | 376 |
| 117 | 3300014968 | Ga0157379_10022946 | Ga0157379_100229462 | 376 |
| 118 | 3300014969 | Ga0157376_10005371 | Ga0157376_100053715 | 376 |
| 119 | 3300014969 | Ga0157376_10031241 | Ga0157376_100312413 | 376 |
| 120 | 3300025914 | Ga0207671_10198729 | Ga0207671_101987291 | 376 |
| 121 | 3300025923 | Ga0207681_10014633 | Ga0207681_100146334 | 376 |
| 122 | 3300025933 | Ga0207706_10023614 | Ga0207706_100236144 | 376 |
| 123 | 3300025934 | Ga0207686_10010324 | Ga0207686_100103243 | 376 |
| 124 | 3300025934 | Ga0207686_10094993 | Ga0207686_100949932 | 376 |
| 125 | 3300026035 | Ga0207703_10014030 | Ga0207703_100140303 | 376 |
| 126 | 3300026095 | Ga0207676_10211522 | Ga0207676_102115222 | 376 |
| 127 | 3300026118 | Ga0207675_100019714 | Ga0207675_1000197142 | 376 |
| 128 | 3300026118 | Ga0207675_100067250 | Ga0207675_1000672503 | 376 |
| 129 | 3300028379 | Ga0268266_10003902 | Ga0268266_1000390211 | 376 |
| 130 | 3300028380 | Ga0268265_10095950 | Ga0268265_100959502 | 376 |
| 131 | 3300045051 | Ga0451576_0006822 | Ga0451576_0006822_12583_13821 | 376 |
| 132 | 3300045051 | Ga0451576_0022489 | Ga0451576_0022489_4495_5655 | 376 |
| 133 | 3300045051 | Ga0451576_0055222 | Ga0451576_0055222_2607_3746 | 376 |
| 134 | 3300048917 | Ga0496114_0066332 | Ga0496114_0066332_1577_2776 | 376 |
| 135 | 3300048918 | Ga0496115_0179579 | Ga0496115_0179579_424_1623 | 376 |
| 136 | 3300050512 | nmdc:mga0n895_94990_c1 | nmdc:mga0n895_94990_c1_419_1618 | 376 |
| 137 | 3300050515 | nmdc:mga0a205_119539_c1 | nmdc:mga0a205_119539_c1_468_1667 | 376 |
| 138 | 3300005331 | Ga0070670_100118512 | Ga0070670_1001185122 | 377 |
| 139 | 3300025925 | Ga0207650_10192811 | Ga0207650_101928112 | 377 |
| 140 | 3300031727 | Ga0316576_10000582 | Ga0316576_100005827 | 377 |
| 141 | 3300036647 | Ga0316582_0006233 | Ga0316582_0006233_1117_2271 | 377 |
| 142 | 3300036712 | Ga0316584_0001675 | Ga0316584_0001675_7069_8223 | 377 |
| 143 | 3300005344 | Ga0070661_100000004 | Ga0070661_100000004117 | 378 |
| 144 | 3300025920 | Ga0207649_10000003 | Ga0207649_10000003142 | 378 |
| 145 | 3300005327 | Ga0070658_10011715 | Ga0070658_100117153 | 379 |
| 146 | 3300005333 | Ga0070677_10000022 | Ga0070677_1000002212 | 379 |
| 147 | 3300005539 | Ga0068853_100045712 | Ga0068853_1000457123 | 379 |
| 148 | 3300005578 | Ga0068854_100000062 | Ga0068854_10000006282 | 379 |
| 149 | 3300005616 | Ga0068852_100000022 | Ga0068852_10000002244 | 379 |
| 150 | 3300005834 | Ga0068851_10000514 | Ga0068851_1000051411 | 379 |
| 151 | 3300006175 | Ga0070712_100000545 | Ga0070712_10000054514 | 379 |
| 152 | 3300009098 | Ga0105245_10000023 | Ga0105245_1000002394 | 379 |
| 153 | 3300013297 | Ga0157378_10001301 | Ga0157378_1000130117 | 379 |
| 154 | 3300025321 | Ga0207656_10000111 | Ga0207656_1000011112 | 379 |
| 155 | 3300025893 | Ga0207682_10000005 | Ga0207682_1000000521 | 379 |
| 156 | 3300025909 | Ga0207705_10031372 | Ga0207705_100313725 | 379 |
| 157 | 3300025915 | Ga0207693_10002243 | Ga0207693_1000224313 | 379 |
| 158 | 3300025927 | Ga0207687_10000015 | Ga0207687_1000001588 | 379 |
| 159 | 3300025938 | Ga0207704_10000084 | Ga0207704_1000008435 | 379 |
| 160 | 3300025944 | Ga0207661_10000372 | Ga0207661_1000037219 | 379 |
| 161 | 3300025944 | Ga0207661_10000966 | Ga0207661_1000096613 | 379 |
| 162 | 3300025981 | Ga0207640_10000074 | Ga0207640_1000007481 | 379 |
| 163 | 3300026142 | Ga0207698_10000043 | Ga0207698_1000004379 | 379 |
| 164 | 3300031251 | Ga0265327_10010499 | Ga0265327_100104993 | 379 |
| 165 | 3300044694 | Ga0466963_0022479 | Ga0466963_0022479_2109_3257 | 379 |
| 166 | 3300046459 | Ga0495629_0000817 | Ga0495629_0000817_21445_22590 | 379 |
| 167 | 3300046507 | Ga0495606_0000017 | Ga0495606_0000017_185568_186713 | 379 |
| 168 | 3300046684 | Ga0495669_0000033 | Ga0495669_0000033_71809_72957 | 379 |
| 169 | 3300046690 | Ga0495624_0000127 | Ga0495624_0000127_47408_48553 | 379 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6blg-assembly1.cif.gz_A | crystal structure of sugar transaminase from klebsiella pneumoniae complexed with plp | 0.9839 | 3 | 373 |
| 4zah-assembly4.cif.gz_H | crystal structure of sugar aminotransferase wece with external aldimine vii from escherichia coli k-12 | 0.9811 | 1 | 373 |
| 4zah-assembly1.cif.gz_B | crystal structure of sugar aminotransferase wece with external aldimine vii from escherichia coli k-12 | 0.9804 | 1 | 374 |
| 4piw-assembly2.cif.gz_D | crystal structure of sugar aminotransferase wece from escherichia coli k-12 | 0.9804 | 3 | 373 |
| 4zah-assembly4.cif.gz_G | crystal structure of sugar aminotransferase wece with external aldimine vii from escherichia coli k-12 | 0.9803 | 1 | 374 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4piwC02 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9783 | 253 | 373 | 3.90.1150.10 |
| 4wfpA01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9757 | 1 | 248 | 3.40.640.10 |
| af_L0T6V0_4_199_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9699 | 1 | 196 | 3.40.640.10 |
| 4wfpA01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9678 | 1 | 248 | 3.40.640.10 |
| af_L0T6V0_4_199_3.40.640.10 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.965 | 1 | 196 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A484HHG8-F1-model_v4 | TDP-4-oxo-6-deoxy-D-glucose transaminase (EC 2.6.1.-) | 0.9889 | 2 | 377 |
GO:0000271
GO:0019180 GO:0030170 |
| AF-A0A7X9EH77-F1-model_v4 | Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.9861 | 1 | 203 |
GO:0000271
GO:0019180 GO:0030170 |
| AF-A0A2G2LYP8-F1-model_v4 | dTDP-4-amino-4,6-dideoxygalactose transaminase | 0.986 | 3 | 377 |
GO:0000271
GO:0019180 GO:0030170 |
| AF-A0A7H4M2L3-F1-model_v4 | 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase (EC 2.6.1.87) | 0.9855 | 42 | 209 |
GO:0000271
GO:0019180 GO:0030170 GO:0099620 |
| AF-A0A1Q3N6H2-F1-model_v4 | dTDP-4-amino-4,6-dideoxygalactose transaminase | 0.985 | 1 | 297 |
GO:0000271
GO:0019180 GO:0030170 |
Predicted Structure (AlphaFold2)
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