F254392

General Info

Members Datasets Scaffolds Average Seq Length
169 111 338 684

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100018212|Ga0068860_1000182123
Length 696
Sequence LNNQAGTVEEHEFTNHLVHETSPYLLQHAHNPVDWYPWGEEAFARARQEDKPVLLSIGYSACHWCHVMAHESFEDEQIAQLMNDLFVNIKVDREERPDLDQIYMNAVQMMTHHGGWPMTVFLTPDAVPFYGGTYFPPQDRYNMPGFPRILISVAEAYRDKRDDIAETSKALLQELQRLSATTGGSDRPVEQELLDGAYVGIIRSYDSVNGGFGNAPKFPPAMTLEFLLRTYVRNGNEEALQIVRHTVEKMGRGGMYDQLGGGFHRYSTDAKWLVPHFEKMLYDNALLSRLYLHYFQVSKDPFAREITEGILDYVLREMTDPKGGFYSTQDADSEGVEGKFFVWQANEITELLGEKQASLFSAAYDITENGNFEHKNIPNLKRPLEEVAVELNVSVSDLRSSLEVSKHKLFTAREKRIKPDRDEKVLTAWNGLMLASFAEAAIVLKRDDYAAAARRNAEFVLSSLRQDGLLLRTWKEGIAKFNAYLEDYAFLIEGLVTLYETTAEDRWLTEAVALTDRMIEEFWDNSDGAFFFTGKSHETLIVRSKDYFDNATPSGNSVAASVLLRLGILLDNEKYRNLAISVFREIGDSARKYPSGFGYALSGIDFMLSTPKEIAIVGVDESSLSAFLRETWRGYLPNKVVAGTLAEDHGKTQPNALLQNRTTVDSKTTAYVCQNYTCQAPVTDLASFRQELSSQP

Samples

Sample ID Description Type Environment
1 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
14 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
98 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
101 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
102 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
103 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
104 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
105 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
106 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
107 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
110 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
111 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068860_100018212 3300005843 Bacteria 6835
2 JGI24748J21848_1000003 3300002074 Bacteria 323921
3 JGI24034J26672_10000005 3300002239 Bacteria 404185
4 JGI24751J29686_10000042 3300002459 Bacteria 78338
5 JGI24751J29686_10000072 3300002459 Bacteria 57601
6 Ga0065714_10002183 3300005288 Bacteria 378167
7 Ga0065704_10003566 3300005289 Bacteria 3988
8 Ga0065712_10000030 3300005290 Bacteria 237869
9 Ga0065715_10089414 3300005293 Bacteria 10379
10 Ga0070670_100012178 3300005331 Bacteria 7356
11 Ga0070670_100012784 3300005331 Bacteria 7184
12 Ga0068869_100013445 3300005334 Bacteria 5445
13 Ga0068869_100027551 3300005334 Bacteria 3963
14 Ga0070682_100000229 3300005337 Bacteria 40502
15 Ga0068868_100042820 3300005338 Bacteria 3536
16 Ga0070689_100021828 3300005340 Bacteria 4772
17 Ga0070689_100033547 3300005340 Bacteria 3912
18 Ga0070687_100043493 3300005343 Bacteria 2283
19 Ga0070673_100005656 3300005364 Bacteria 8031
20 Ga0070673_100015096 3300005364 Bacteria 5409
21 Ga0070688_100018146 3300005365 Bacteria 4054
22 Ga0070659_100002497 3300005366 Bacteria 13068
23 Ga0070667_100026644 3300005367 Bacteria 4809
24 Ga0070703_10003545 3300005406 Bacteria 4438
25 Ga0070705_100011659 3300005440 Bacteria 4442
26 Ga0070694_100024075 3300005444 Bacteria 3927
27 Ga0070708_100000262 3300005445 Bacteria 39395
28 Ga0070708_100010697 3300005445 Bacteria 7446
29 Ga0070681_10004266 3300005458 Bacteria 13562
30 Ga0068867_100089745 3300005459 Bacteria 2331
31 Ga0070706_100000002 3300005467 Bacteria 326510
32 Ga0070706_100009354 3300005467 Bacteria 9127
33 Ga0070706_100035384 3300005467 Bacteria 4612
34 Ga0070698_100002484 3300005471 Bacteria 20319
35 Ga0070698_100006293 3300005471 Bacteria 12897
36 Ga0070699_100000464 3300005518 Bacteria 38764
37 Ga0070699_100001505 3300005518 Bacteria 21319
38 Ga0070679_100000029 3300005530 Bacteria 108401
39 Ga0070679_100006455 3300005530 Bacteria 10926
40 Ga0070697_100000478 3300005536 Bacteria 30435
41 Ga0068853_100011595 3300005539 Bacteria 7166
42 Ga0068853_100062578 3300005539 Bacteria 3221
43 Ga0070686_100004386 3300005544 Bacteria 7778
44 Ga0070695_100042046 3300005545 Bacteria 2900
45 Ga0070693_100003591 3300005547 Bacteria 7238
46 Ga0070665_100093507 3300005548 Bacteria 3012
47 Ga0068857_100001334 3300005577 Bacteria 19420
48 Ga0070702_100033398 3300005615 Bacteria 2829
49 Ga0068852_100060708 3300005616 Bacteria 3283
50 Ga0068859_100017726 3300005617 Bacteria 7159
51 Ga0068859_100037829 3300005617 Bacteria 4842
52 Ga0068859_100047632 3300005617 Bacteria 4307
53 Ga0068864_100003399 3300005618 Bacteria 13154
54 Ga0068864_100011408 3300005618 Bacteria 7340
55 Ga0068864_100039770 3300005618 Bacteria 4019
56 Ga0068861_100034899 3300005719 Bacteria 3721
57 Ga0068870_10016287 3300005840 Bacteria 3548
58 Ga0068863_100110179 3300005841 Bacteria 2622
59 Ga0068858_100000311 3300005842 Bacteria 51906
60 Ga0068860_100024085 3300005843 Bacteria 5885
61 Ga0068860_100033147 3300005843 Bacteria 4958
62 Ga0081539_10000912 3300005985 Bacteria 55918
63 Ga0097621_100044335 3300006237 Bacteria 3588
64 Ga0068871_100001705 3300006358 Bacteria 14772
65 Ga0075430_100053449 3300006846 Bacteria 3401
66 Ga0075433_10082875 3300006852 Bacteria 2829
67 Ga0075434_100009698 3300006871 Bacteria 8997
68 Ga0075434_100035002 3300006871 Bacteria 4964
69 Ga0075434_100049352 3300006871 Bacteria 4179
70 Ga0097620_100017726 3300006931 Bacteria 7159
71 Ga0097620_100037829 3300006931 Bacteria 4842
72 Ga0097620_100047634 3300006931 Bacteria 4307
73 Ga0075435_100014133 3300007076 Bacteria 5957
74 Ga0111539_10000646 3300009094 Bacteria 45013
75 Ga0111539_10008790 3300009094 Bacteria 12809
76 Ga0105247_10000022 3300009101 Bacteria 219796
77 Ga0105247_10003890 3300009101 Bacteria 9648
78 Ga0114129_10003455 3300009147 Bacteria 22220
79 Ga0114129_10044678 3300009147 Bacteria 6232
80 Ga0114129_10086892 3300009147 Bacteria 4336
81 Ga0105243_10051464 3300009148 Bacteria 3258
82 Ga0105241_10013507 3300009174 Bacteria 5983
83 Ga0105241_10058117 3300009174 Bacteria 2969
84 Ga0105248_10006414 3300009177 Bacteria 12907
85 Ga0105248_10029192 3300009177 Bacteria 6151
86 Ga0105248_10130107 3300009177 Bacteria 2839
87 Ga0105238_10052444 3300009551 Bacteria 4100
88 Ga0105238_10056391 3300009551 Bacteria 3942
89 Ga0157374_10009057 3300013296 Bacteria 8529
90 Ga0157378_10003014 3300013297 Bacteria 14968
91 Ga0157378_10007051 3300013297 Bacteria 9811
92 Ga0157378_10008157 3300013297 Bacteria 9140
93 Ga0163162_10010314 3300013306 Bacteria 9080
94 Ga0157372_10019581 3300013307 Bacteria 7293
95 Ga0157375_10012145 3300013308 Bacteria 7632
96 Ga0157375_10060975 3300013308 Bacteria 3743
97 Ga0163163_10001302 3300014325 Bacteria 21073
98 Ga0163163_10001814 3300014325 Bacteria 18015
99 Ga0163163_10011956 3300014325 Bacteria 7897
100 Ga0163163_10018588 3300014325 Bacteria 6511
101 Ga0163163_10157519 3300014325 Bacteria 2315
102 Ga0157380_10006399 3300014326 Bacteria 8291
103 Ga0157380_10015424 3300014326 Bacteria 5616
104 Ga0157380_10017250 3300014326 Bacteria 5342
105 Ga0163161_10004034 3300017792 Bacteria 10275
106 Ga0207653_10011268 3300025885 Bacteria 2790
107 Ga0207710_10000001 3300025900 Bacteria 1797433
108 Ga0207710_10003908 3300025900 Bacteria 6582
109 Ga0207647_10004601 3300025904 Bacteria 10216
110 Ga0207684_10000076 3300025910 Bacteria 183107
111 Ga0207684_10008246 3300025910 Bacteria 9277
112 Ga0207684_10008284 3300025910 Bacteria 9255
113 Ga0207707_10000060 3300025912 Bacteria 108561
114 Ga0207695_10101306 3300025913 Bacteria 2874
115 Ga0207671_10002962 3300025914 Bacteria 17467
116 Ga0207662_10000871 3300025918 Bacteria 13932
117 Ga0207652_10000073 3300025921 Bacteria 108588
118 Ga0207681_10038567 3300025923 Bacteria 3167
119 Ga0207694_10003497 3300025924 Bacteria 12486
120 Ga0207650_10000027 3300025925 Bacteria 257466
121 Ga0207650_10000588 3300025925 Bacteria 29190
122 Ga0207644_10003392 3300025931 Bacteria 10279
123 Ga0207686_10024408 3300025934 Bacteria 3504
124 Ga0207670_10000488 3300025936 Bacteria 21872
125 Ga0207711_10008703 3300025941 Bacteria 8488
126 Ga0207711_10016712 3300025941 Bacteria 6093
127 Ga0207711_10071485 3300025941 Bacteria 3010
128 Ga0207689_10012232 3300025942 Bacteria 7343
129 Ga0207689_10020636 3300025942 Bacteria 5540
130 Ga0207689_10020714 3300025942 Bacteria 5529
131 Ga0207689_10092135 3300025942 Bacteria 2489
132 Ga0207651_10033394 3300025960 Bacteria 3319
133 Ga0207651_10069486 3300025960 Unclassified 2487
134 Ga0207703_10000024 3300026035 Bacteria 217968
135 Ga0207703_10017533 3300026035 Bacteria 5589
136 Ga0207703_10085661 3300026035 Bacteria 2638
137 Ga0207703_10100079 3300026035 Bacteria 2455
138 Ga0207702_10016263 3300026078 Bacteria 6157
139 Ga0207641_10028881 3300026088 Bacteria 4584
140 Ga0207648_10013669 3300026089 Bacteria 7537
141 Ga0207676_10003793 3300026095 Bacteria 10687
142 Ga0207676_10006062 3300026095 Bacteria 8531
143 Ga0207674_10000392 3300026116 Bacteria 56723
144 Ga0207674_10027488 3300026116 Bacteria 6017
145 Ga0207675_100006776 3300026118 Bacteria 10836
146 Ga0207675_100124246 3300026118 Bacteria 2444
147 Ga0207683_10050867 3300026121 Bacteria 3630
148 Ga0207428_10011665 3300027907 Bacteria 7752
149 Ga0268266_10071411 3300028379 Bacteria 3009
150 Ga0268264_10067532 3300028381 Bacteria 3018
151 Ga0268264_10090649 3300028381 Bacteria 2635
152 Ga0307408_100030990 3300031548 Bacteria 3719
153 Ga0307413_10030361 3300031824 Bacteria 3036
154 Ga0307407_10037198 3300031903 Bacteria 2688
155 Ga0307414_10000777 3300032004 Bacteria 16349
156 Ga0307415_100009822 3300032126 Bacteria 5389
157 Ga0495663_0000534 3300046525 Bacteria 13585
158 Ga0495598_0001702 3300046537 Bacteria 4406
159 Ga0495621_0000062 3300046539 Bacteria 20585
160 Ga0501292_003026 3300049515 Bacteria 2216
161 Ga0501299_000644 3300049522 Bacteria 4153
162 Ga0501225_0001263 3300049705 Bacteria 7854
163 Ga0501226_001173 3300049853 Bacteria 3397
164 nmdc:mga05p37_128870_c1 3300050507 Bacteria 3106
165 nmdc:mga05p37_36532_c1 3300050507 Bacteria 6026
166 nmdc:mga05p37_47621_c1 3300050507 Bacteria 5271
167 nmdc:mga0n895_29889_c1 3300050512 Bacteria 5201
168 nmdc:mga0a205_84229_c1 3300050515 Bacteria 3071
169 Ga0530510_0045471 3300061734 Bacteria 3172
170 Ga0068860_100018212
171 JGI24748J21848_1000003
172 JGI24034J26672_10000005
173 JGI24751J29686_10000042
174 JGI24751J29686_10000072
175 Ga0065714_10002183
176 Ga0065704_10003566
177 Ga0065712_10000030
178 Ga0065715_10089414
179 Ga0070670_100012178
180 Ga0070670_100012784
181 Ga0068869_100013445
182 Ga0068869_100027551
183 Ga0070682_100000229
184 Ga0068868_100042820
185 Ga0070689_100021828
186 Ga0070689_100033547
187 Ga0070687_100043493
188 Ga0070673_100005656
189 Ga0070673_100015096
190 Ga0070688_100018146
191 Ga0070659_100002497
192 Ga0070667_100026644
193 Ga0070703_10003545
194 Ga0070705_100011659
195 Ga0070694_100024075
196 Ga0070708_100000262
197 Ga0070708_100010697
198 Ga0070681_10004266
199 Ga0068867_100089745
200 Ga0070706_100000002
201 Ga0070706_100009354
202 Ga0070706_100035384
203 Ga0070698_100002484
204 Ga0070698_100006293
205 Ga0070699_100000464
206 Ga0070699_100001505
207 Ga0070679_100000029
208 Ga0070679_100006455
209 Ga0070697_100000478
210 Ga0068853_100011595
211 Ga0068853_100062578
212 Ga0070686_100004386
213 Ga0070695_100042046
214 Ga0070693_100003591
215 Ga0070665_100093507
216 Ga0068857_100001334
217 Ga0070702_100033398
218 Ga0068852_100060708
219 Ga0068859_100017726
220 Ga0068859_100037829
221 Ga0068859_100047632
222 Ga0068864_100003399
223 Ga0068864_100011408
224 Ga0068864_100039770
225 Ga0068861_100034899
226 Ga0068870_10016287
227 Ga0068863_100110179
228 Ga0068858_100000311
229 Ga0068860_100024085
230 Ga0068860_100033147
231 Ga0081539_10000912
232 Ga0097621_100044335
233 Ga0068871_100001705
234 Ga0075430_100053449
235 Ga0075433_10082875
236 Ga0075434_100009698
237 Ga0075434_100035002
238 Ga0075434_100049352
239 Ga0097620_100017726
240 Ga0097620_100037829
241 Ga0097620_100047634
242 Ga0075435_100014133
243 Ga0111539_10000646
244 Ga0111539_10008790
245 Ga0105247_10000022
246 Ga0105247_10003890
247 Ga0114129_10003455
248 Ga0114129_10044678
249 Ga0114129_10086892
250 Ga0105243_10051464
251 Ga0105241_10013507
252 Ga0105241_10058117
253 Ga0105248_10006414
254 Ga0105248_10029192
255 Ga0105248_10130107
256 Ga0105238_10052444
257 Ga0105238_10056391
258 Ga0157374_10009057
259 Ga0157378_10003014
260 Ga0157378_10007051
261 Ga0157378_10008157
262 Ga0163162_10010314
263 Ga0157372_10019581
264 Ga0157375_10012145
265 Ga0157375_10060975
266 Ga0163163_10001302
267 Ga0163163_10001814
268 Ga0163163_10011956
269 Ga0163163_10018588
270 Ga0163163_10157519
271 Ga0157380_10006399
272 Ga0157380_10015424
273 Ga0157380_10017250
274 Ga0163161_10004034
275 Ga0207653_10011268
276 Ga0207710_10000001
277 Ga0207710_10003908
278 Ga0207647_10004601
279 Ga0207684_10000076
280 Ga0207684_10008246
281 Ga0207684_10008284
282 Ga0207707_10000060
283 Ga0207695_10101306
284 Ga0207671_10002962
285 Ga0207662_10000871
286 Ga0207652_10000073
287 Ga0207681_10038567
288 Ga0207694_10003497
289 Ga0207650_10000027
290 Ga0207650_10000588
291 Ga0207644_10003392
292 Ga0207686_10024408
293 Ga0207670_10000488
294 Ga0207711_10008703
295 Ga0207711_10016712
296 Ga0207711_10071485
297 Ga0207689_10012232
298 Ga0207689_10020636
299 Ga0207689_10020714
300 Ga0207689_10092135
301 Ga0207651_10033394
302 Ga0207651_10069486
303 Ga0207703_10000024
304 Ga0207703_10017533
305 Ga0207703_10085661
306 Ga0207703_10100079
307 Ga0207702_10016263
308 Ga0207641_10028881
309 Ga0207648_10013669
310 Ga0207676_10003793
311 Ga0207676_10006062
312 Ga0207674_10000392
313 Ga0207674_10027488
314 Ga0207675_100006776
315 Ga0207675_100124246
316 Ga0207683_10050867
317 Ga0207428_10011665
318 Ga0268266_10071411
319 Ga0268264_10067532
320 Ga0268264_10090649
321 Ga0307408_100030990
322 Ga0307413_10030361
323 Ga0307407_10037198
324 Ga0307414_10000777
325 Ga0307415_100009822
326 Ga0495663_0000534
327 Ga0495598_0001702
328 Ga0495621_0000062
329 Ga0501292_003026
330 Ga0501299_000644
331 Ga0501225_0001263
332 Ga0501226_001173
333 nmdc:mga05p37_128870_c1
334 nmdc:mga05p37_36532_c1
335 nmdc:mga05p37_47621_c1
336 nmdc:mga0n895_29889_c1
337 nmdc:mga0a205_84229_c1
338 Ga0530510_0045471

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03190

Thioredox_DsbH

Protein of unknown function, DUF255

14

176

0.99

PF13899

Thioredoxin_7

Thioredoxin-like

34

124

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ira-assembly1.cif.gz_A the crystal structure of one domain of the conserved protein from methanosarcina mazei go1 0.8588 7 164
3ira-assembly1.cif.gz_A the crystal structure of one domain of the conserved protein from methanosarcina mazei go1 0.7885 7 164
7tkv-assembly1.cif.gz_B crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus 0.7608 7 638
6onu-assembly4.cif.gz_H complex structure of whib1 and region 4 of siga in p21 space group. 0.7581 337 406
7tkv-assembly1.cif.gz_B crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus 0.7563 7 638
ID Description Score Start End Superfamily
af_E7F7E2_263_529_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9035 178 408 1.50.10.10
af_Q55BX2_260_507_1.50.10.20 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.9001 181 402 1.50.10.20
af_O53432_333_673_1.50.10.10 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8875 334 684 1.50.10.10
af_O53432_177_332_1.50.10.20 Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; 0.8842 180 333 1.50.10.20
af_O53432_8_170_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8838 7 169 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A354YXD5-F1-model_v4 Thioredoxin domain-containing protein 0.9622 421 601 GO:0005975
AF-A0A7Y4XB20-F1-model_v4 Thioredoxin domain-containing protein 0.9606 189 688 GO:0005975
AF-A0A538SIL6-F1-model_v4 Thiol:disulfide interchange protein DsbD N-terminal domain-containing protein 0.9604 418 595 GO:0005975
AF-A0A3D4YPZ8-F1-model_v4 Thioredoxin domain-containing protein 0.9589 410 633 GO:0005975
AF-A0A3D4YPZ8-F1-model_v4 Thioredoxin domain-containing protein 0.9547 410 633 GO:0005975

Map