F252552

General Info

Members Datasets Scaffolds Average Seq Length
168 93 168 490

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10019086|Ga0105245_100190862
Length 519
Sequence MDLIRRSGWVYAFLAAIWLVVVCWQTQEHRRVTEAAKADLRSRSKDIAKTLSAVIRGLRFRGAVPQERLEPVLNELVNGRTNELISSSELMGIKLLNAAGEPVASAGVAIDLDQKDLVQEGERWGQRSVTLVNPVDLGATLTSEGATNPTVVLPPHDFSNAPREGRPSSRREARSGEGNISNSDSSSNLNAEAGPPRIPGVAGERDGRRREGEVRTRRPPWLRGMDEKDYQSLLEKRSLHGLVLAMSTESFRAATTHDLWLRSVIVFLATISVLGSGLAWRNLSKSSELQIRLVRASELNTHLKEMNLAAAGLAHETRNPLNIIRGLAQMMSRREDAPSEIRERIRGIIDEADKVTAQLNEFINYSRPREVRRSALVLGSVVNEVVRALNYDLEEKRIQVEVKGEPLNIEADEQLLRQTLFNLLLNAVQAVDGAGKIEIFTQKRTASEAMLEVRDNGPGVPADRRTEIFKPYVTTQKQGTGLGLAVVQQIVLAHGWEIECLPNTPNGAVFRITHLKLAA

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
7 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
23 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
37 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
38 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
39 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
40 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
41 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
42 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
43 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
44 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
45 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
46 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
47 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
51 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
52 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
53 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
54 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
55 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
56 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
57 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
58 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
59 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
60 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
61 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
62 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
72 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
73 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
74 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
75 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
76 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
77 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
78 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
79 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
80 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.19
Rhizosphere 97.62
Stem 0
Stem Tuber 0
Unclassified 1.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10009094 3300003320 Bacteria 13031
2 rootH2_10022297 3300003320 Bacteria 1689
3 Ga0070658_10039545 3300005327 Bacteria 3805
4 Ga0070714_100040514 3300005435 Bacteria 3926
5 Ga0070711_100010308 3300005439 Bacteria 5780
6 Ga0070681_10005151 3300005458 Bacteria 12610
7 Ga0070681_10098959 3300005458 Bacteria 2863
8 Ga0070686_100002271 3300005544 Bacteria 10605
9 Ga0070704_100002338 3300005549 Bacteria 10633
10 Ga0068855_100028701 3300005563 Bacteria 6658
11 Ga0068855_100233722 3300005563 Unclassified 2057
12 Ga0068857_100005668 3300005577 Bacteria 10673
13 Ga0068857_100052733 3300005577 Bacteria 3608
14 Ga0068856_100000293 3300005614 Bacteria 54873
15 Ga0068859_100093238 3300005617 Bacteria 3063
16 Ga0068864_100199512 3300005618 Bacteria 1837
17 Ga0068863_100040754 3300005841 Bacteria 4415
18 Ga0068858_100033474 3300005842 Bacteria 4768
19 Ga0070717_10000164 3300006028 Bacteria 50120
20 Ga0075436_100125861 3300006914 Bacteria 1795
21 Ga0097620_100093242 3300006931 Bacteria 3063
22 Ga0105240_10002624 3300009093 Bacteria 28665
23 Ga0105240_10136756 3300009093 Bacteria 2934
24 Ga0105240_10147542 3300009093 Bacteria 2805
25 Ga0105240_10163046 3300009093 Bacteria 2646
26 Ga0105240_10317921 3300009093 Bacteria 1775
27 Ga0111539_10241570 3300009094 Unclassified 2103
28 Ga0111539_10338267 3300009094 Bacteria 1752
29 Ga0105245_10019086 3300009098 Bacteria 6002
30 Ga0105238_10029025 3300009551 Bacteria 5635
31 Ga0105238_10035217 3300009551 Bacteria 5091
32 Ga0157374_10130331 3300013296 Bacteria 2433
33 Ga0157375_10000051 3300013308 Bacteria 130143
34 Ga0157375_10110526 3300013308 Unclassified 2846
35 Ga0163163_10000096 3300014325 Bacteria 93313
36 Ga0207707_10084299 3300025912 Bacteria 2776
37 Ga0207695_10023071 3300025913 Bacteria 7044
38 Ga0207663_10006858 3300025916 Bacteria 5863
39 Ga0207652_10142733 3300025921 Bacteria 2142
40 Ga0207694_10010080 3300025924 Bacteria 7123
41 Ga0207687_10072136 3300025927 Bacteria 2469
42 Ga0207664_10001413 3300025929 Bacteria 15799
43 Ga0207670_10078779 3300025936 Bacteria 2299
44 Ga0207667_10042376 3300025949 Bacteria 4839
45 Ga0207703_10051507 3300026035 Bacteria 3337
46 Ga0207702_10000448 3300026078 Bacteria 46553
47 Ga0207702_10020330 3300026078 Bacteria 5499
48 Ga0265337_1000018 3300028556 Bacteria 76481
49 Ga0265337_1000883 3300028556 Bacteria 15760
50 Ga0265337_1003073 3300028556 Bacteria 7364
51 Ga0265337_1010154 3300028556 Bacteria 3312
52 Ga0265319_1016235 3300028563 Unclassified 2858
53 Ga0265334_10009399 3300028573 Bacteria 4136
54 Ga0265334_10009615 3300028573 Bacteria 4089
55 Ga0265334_10011248 3300028573 Bacteria 3772
56 Ga0265323_10000016 3300028653 Bacteria 96953
57 Ga0265338_10000237 3300028800 Bacteria 101850
58 Ga0265338_10000294 3300028800 Bacteria 90033
59 Ga0265338_10000398 3300028800 Bacteria 77989
60 Ga0265338_10001023 3300028800 Bacteria 46910
61 Ga0265338_10001986 3300028800 Bacteria 31807
62 Ga0265338_10002169 3300028800 Bacteria 30159
63 Ga0265338_10002568 3300028800 Bacteria 26849
64 Ga0265338_10003919 3300028800 Bacteria 20532
65 Ga0265338_10004977 3300028800 Bacteria 17594
66 Ga0265338_10008250 3300028800 Bacteria 12683
67 Ga0265338_10019144 3300028800 Bacteria 7284
68 Ga0265338_10021081 3300028800 Bacteria 6813
69 Ga0265338_10022663 3300028800 Bacteria 6490
70 Ga0265338_10082421 3300028800 Unclassified 2693
71 Ga0265338_10123587 3300028800 Unclassified 2058
72 Ga0265324_10000113 3300029957 Bacteria 64194
73 Ga0265324_10003154 3300029957 Bacteria 8000
74 Ga0265324_10013913 3300029957 Bacteria 2988
75 Ga0265324_10014851 3300029957 Bacteria 2870
76 Ga0265324_10019606 3300029957 Bacteria 2434
77 Ga0265328_10017318 3300031239 Bacteria 2790
78 Ga0265320_10000830 3300031240 Bacteria 23320
79 Ga0265320_10035808 3300031240 Bacteria 2514
80 Ga0265325_10011546 3300031241 Bacteria 5073
81 Ga0265325_10049304 3300031241 Bacteria 2173
82 Ga0265329_10007820 3300031242 Bacteria 4101
83 Ga0265340_10001165 3300031247 Bacteria 15059
84 Ga0265339_10002854 3300031249 Bacteria 12264
85 Ga0265339_10012036 3300031249 Bacteria 5302
86 Ga0265327_10000215 3300031251 Bacteria 119243
87 Ga0265327_10003981 3300031251 Bacteria 13476
88 Ga0265327_10070149 3300031251 Bacteria 1756
89 Ga0265316_10000797 3300031344 Bacteria 34790
90 Ga0265316_10004023 3300031344 Bacteria 14721
91 Ga0265316_10112736 3300031344 Bacteria 2058
92 Ga0265314_10000142 3300031711 Bacteria 108299
93 Ga0265314_10014626 3300031711 Bacteria 6266
94 Ga0265314_10025946 3300031711 Bacteria 4411
95 Ga0307405_10050856 3300031731 Bacteria 2569
96 Ga0373930_0000837 3300034816 Bacteria 4362
97 Ga0373928_0000101 3300035084 Bacteria 15286
98 Ga0373944_0000006 3300035089 Bacteria 46890
99 Ga0373944_0008739 3300035089 Bacteria 2738
100 Ga0373949_0000990 3300035090 Bacteria 8789
101 Ga0373951_0004809 3300035091 Bacteria 3181
102 Ga0373932_0000006 3300035112 Bacteria 208547
103 Ga0373939_0006612 3300035114 Bacteria 2798
104 Ga0373954_0014426 3300035118 Bacteria 3523
105 Ga0373954_0023221 3300035118 Bacteria 2818
106 Ga0373956_0048972 3300035119 Archaea 1894
107 Ga0373962_0000020 3300035242 Bacteria 44353
108 Ga0373931_0000009 3300035691 Bacteria 349854
109 Ga0373935_0053907 3300035692 Bacteria 2559
110 Ga0373935_0054777 3300035692 Bacteria 2541
111 Ga0373927_0002645 3300035695 Bacteria 13049
112 Ga0373937_0062578 3300036401 Bacteria 3421
113 Ga0373925_0000301 3300037068 Bacteria 51799
114 Ga0395905_0105526 3300037471 Bacteria 2646
115 Ga0451577_0008048 3300042876 Bacteria 10288
116 Ga0451577_0014344 3300042876 Bacteria 7388
117 Ga0451577_0017878 3300042876 Bacteria 6542
118 Ga0451577_0184533 3300042876 Unclassified 1881
119 Ga0453684_0001577 3300044712 Bacteria 63055
120 Ga0453684_0002551 3300044712 Bacteria 43788
121 Ga0453684_0008921 3300044712 Bacteria 17752
122 Ga0451576_0034347 3300045051 Bacteria 5387
123 Ga0451576_0046820 3300045051 Bacteria 4552
124 Ga0451576_0048747 3300045051 Bacteria 4447
125 Ga0451576_0070725 3300045051 Bacteria 3632
126 Ga0451576_0081652 3300045051 Bacteria 3362
127 Ga0451576_0094288 3300045051 Bacteria 3113
128 Ga0451576_0373962 3300045051 Unclassified 1493
129 Ga0495592_0000167 3300046454 Bacteria 58650
130 Ga0495592_0088223 3300046454 Bacteria 2230
131 Ga0495618_0001379 3300046514 Bacteria 16339
132 Ga0495618_0004184 3300046514 Bacteria 8909
133 Ga0495628_0000574 3300046516 Bacteria 33726
134 Ga0495628_0032864 3300046516 Bacteria 4185
135 Ga0495630_0000198 3300046517 Bacteria 47012
136 Ga0495630_0011661 3300046517 Bacteria 6369
137 Ga0495630_0030070 3300046517 Bacteria 4039
138 Ga0495630_0031171 3300046517 Bacteria 3969
139 Ga0495586_0000106 3300046535 Bacteria 49541
140 Ga0495586_0000173 3300046535 Bacteria 42356
141 Ga0495586_0001761 3300046535 Bacteria 11830
142 Ga0495586_0003529 3300046535 Bacteria 8385
143 Ga0495634_0036328 3300046642 Bacteria 3369
144 Ga0495599_0003902 3300046678 Bacteria 8774
145 Ga0495599_0029787 3300046678 Bacteria 3423
146 Ga0495658_0027639 3300046683 Bacteria 3055
147 Ga0495613_0014837 3300046689 Bacteria 5782
148 Ga0495613_0108831 3300046689 Unclassified 1998
149 Ga0495674_0001057 3300047319 Bacteria 26468
150 Ga0495674_0004690 3300047319 Bacteria 13147
151 Ga0495674_0013269 3300047319 Bacteria 7748
152 Ga0495674_0072466 3300047319 Bacteria 2971
153 Ga0495680_0022287 3300047322 Bacteria 5282
154 Ga0495675_0031671 3300047444 Bacteria 3376
155 Ga0496107_0029424 3300048910 Bacteria 3907
156 Ga0496115_0003801 3300048918 Bacteria 10868
157 Ga0501031_0002815 3300049568 Bacteria 11110
158 Ga0501033_0024809 3300049570 Unclassified 4522
159 Ga0501033_0102099 3300049570 Bacteria 2092
160 Ga0501034_0114248 3300049571 Bacteria 2688
161 Ga0501036_0318433 3300049572 Bacteria 1300
162 Ga0501037_0077961 3300049573 Unclassified 2404
163 Ga0501043_0016598 3300049579 Bacteria 5771
164 Ga0501035_0005414 3300049822 Bacteria 12066
165 Ga0501044_0000148 3300049823 Bacteria 86490
166 Ga0501044_0008996 3300049823 Bacteria 10923
167 Ga0501044_0030824 3300049823 Bacteria 5648
168 nmdc:mga08x19_111624_c1 3300050514 Bacteria 1824

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0318433 Ga0501036_0318433_45_1283 376
2 3300045051 Ga0451576_0081652 Ga0451576_0081652_883_2367 420
3 3300046689 Ga0495613_0108831 Ga0495613_0108831_648_1979 422
4 3300031240 Ga0265320_10035808 Ga0265320_100358081 428
5 3300031241 Ga0265325_10049304 Ga0265325_100493041 428
6 3300047444 Ga0495675_0031671 Ga0495675_0031671_1317_2792 429
7 3300035089 Ga0373944_0008739 Ga0373944_0008739_678_2189 430
8 3300046454 Ga0495592_0000167 Ga0495592_0000167_37306_38919 431
9 3300046514 Ga0495618_0001379 Ga0495618_0001379_6540_8153 431
10 3300046516 Ga0495628_0000574 Ga0495628_0000574_19277_20890 431
11 3300046517 Ga0495630_0011661 Ga0495630_0011661_3452_5065 431
12 3300046535 Ga0495586_0000173 Ga0495586_0000173_37197_38810 431
13 3300046678 Ga0495599_0003902 Ga0495599_0003902_2739_4352 431
14 3300046683 Ga0495658_0027639 Ga0495658_0027639_553_2166 431
15 3300047319 Ga0495674_0004690 Ga0495674_0004690_3762_5375 431
16 3300035118 Ga0373954_0023221 Ga0373954_0023221_13_1407 433
17 3300037471 Ga0395905_0105526 Ga0395905_0105526_1073_2578 441
18 3300006028 Ga0070717_10000164 Ga0070717_100001649 447
19 3300009093 Ga0105240_10147542 Ga0105240_101475422 448
20 3300042876 Ga0451577_0017878 Ga0451577_0017878_599_2158 448
21 3300005617 Ga0068859_100093238 Ga0068859_1000932382 449
22 3300006931 Ga0097620_100093242 Ga0097620_1000932422 449
23 3300025936 Ga0207670_10078779 Ga0207670_100787792 449
24 3300048910 Ga0496107_0029424 Ga0496107_0029424_1717_3192 449
25 3300031249 Ga0265339_10012036 Ga0265339_100120361 450
26 3300005458 Ga0070681_10005151 Ga0070681_100051513 453
27 3300025912 Ga0207707_10084299 Ga0207707_100842991 453
28 3300045051 Ga0451576_0373962 Ga0451576_0373962_20_1462 453
29 3300029957 Ga0265324_10013913 Ga0265324_100139132 456
30 3300031239 Ga0265328_10017318 Ga0265328_100173181 456
31 3300031242 Ga0265329_10007820 Ga0265329_100078204 456
32 3300031711 Ga0265314_10000142 Ga0265314_1000014249 456
33 3300029957 Ga0265324_10019606 Ga0265324_100196061 457
34 3300031731 Ga0307405_10050856 Ga0307405_100508562 457
35 3300028800 Ga0265338_10008250 Ga0265338_100082506 458
36 3300049823 Ga0501044_0030824 Ga0501044_0030824_664_2121 458
37 3300005577 Ga0068857_100052733 Ga0068857_1000527332 461
38 3300005544 Ga0070686_100002271 Ga0070686_1000022716 462
39 3300005549 Ga0070704_100002338 Ga0070704_1000023386 462
40 3300005618 Ga0068864_100199512 Ga0068864_1001995121 464
41 3300009094 Ga0111539_10241570 Ga0111539_102415702 464
42 3300028556 Ga0265337_1010154 Ga0265337_10101542 464
43 3300028563 Ga0265319_1016235 Ga0265319_10162352 464
44 3300028573 Ga0265334_10009615 Ga0265334_100096152 464
45 3300031249 Ga0265339_10002854 Ga0265339_100028547 464
46 3300031344 Ga0265316_10004023 Ga0265316_100040237 464
47 3300031711 Ga0265314_10025946 Ga0265314_100259462 464
48 3300028556 Ga0265337_1000018 Ga0265337_100001839 465
49 3300009093 Ga0105240_10317921 Ga0105240_103179211 466
50 3300009551 Ga0105238_10029025 Ga0105238_100290252 466
51 3300028800 Ga0265338_10000237 Ga0265338_1000023753 466
52 3300031251 Ga0265327_10003981 Ga0265327_100039816 466
53 3300009093 Ga0105240_10163046 Ga0105240_101630462 467
54 3300028800 Ga0265338_10000398 Ga0265338_1000039836 467
55 3300028800 Ga0265338_10001023 Ga0265338_1000102339 467
56 3300029957 Ga0265324_10000113 Ga0265324_1000011328 467
57 3300031711 Ga0265314_10014626 Ga0265314_100146263 467
58 3300035119 Ga0373956_0048972 Ga0373956_0048972_10_1506 467
59 3300014325 Ga0163163_10000096 Ga0163163_1000009668 468
60 3300025949 Ga0207667_10042376 Ga0207667_100423763 468
61 3300042876 Ga0451577_0008048 Ga0451577_0008048_6301_7851 468
62 3300044712 Ga0453684_0008921 Ga0453684_0008921_545_2095 468
63 3300045051 Ga0451576_0070725 Ga0451576_0070725_443_2011 468
64 3300046517 Ga0495630_0000198 Ga0495630_0000198_20711_22300 468
65 3300046535 Ga0495586_0000106 Ga0495586_0000106_27262_28851 468
66 3300047319 Ga0495674_0001057 Ga0495674_0001057_696_2285 468
67 3300028800 Ga0265338_10019144 Ga0265338_100191442 469
68 3300029957 Ga0265324_10003154 Ga0265324_100031542 469
69 3300031241 Ga0265325_10011546 Ga0265325_100115462 469
70 3300028800 Ga0265338_10002568 Ga0265338_100025684 470
71 3300035692 Ga0373935_0054777 Ga0373935_0054777_742_2205 470
72 3300049570 Ga0501033_0102099 Ga0501033_0102099_158_1726 470
73 3300049571 Ga0501034_0114248 Ga0501034_0114248_1108_2676 470
74 3300028653 Ga0265323_10000016 Ga0265323_1000001627 471
75 3300005842 Ga0068858_100033474 Ga0068858_1000334742 472
76 3300006914 Ga0075436_100125861 Ga0075436_1001258611 472
77 3300013308 Ga0157375_10110526 Ga0157375_101105262 472
78 3300026035 Ga0207703_10051507 Ga0207703_100515072 472
79 3300050514 nmdc:mga08x19_111624_c1 nmdc:mga08x19_111624_c1_119_1651 472
80 3300028800 Ga0265338_10021081 Ga0265338_100210814 473
81 3300031247 Ga0265340_10001165 Ga0265340_1000116514 474
82 3300048918 Ga0496115_0003801 Ga0496115_0003801_5762_7366 476
83 3300003320 rootH2_10022297 rootH2_100222971 477
84 3300045051 Ga0451576_0034347 Ga0451576_0034347_85_1665 477
85 3300028573 Ga0265334_10011248 Ga0265334_100112483 478
86 3300031344 Ga0265316_10112736 Ga0265316_101127361 478
87 3300042876 Ga0451577_0014344 Ga0451577_0014344_102_1682 478
88 3300044712 Ga0453684_0001577 Ga0453684_0001577_20797_22377 478
89 3300045051 Ga0451576_0094288 Ga0451576_0094288_706_2208 478
90 3300005563 Ga0068855_100028701 Ga0068855_1000287013 479
91 3300009093 Ga0105240_10136756 Ga0105240_101367562 479
92 3300009094 Ga0111539_10338267 Ga0111539_103382671 479
93 3300009551 Ga0105238_10035217 Ga0105238_100352172 479
94 3300025924 Ga0207694_10010080 Ga0207694_100100803 479
95 3300026078 Ga0207702_10020330 Ga0207702_100203302 479
96 3300045051 Ga0451576_0048747 Ga0451576_0048747_1862_3439 479
97 3300025921 Ga0207652_10142733 Ga0207652_101427332 480
98 3300028800 Ga0265338_10022663 Ga0265338_100226634 480
99 3300009093 Ga0105240_10002624 Ga0105240_1000262425 481
100 3300025913 Ga0207695_10023071 Ga0207695_100230716 481
101 3300031251 Ga0265327_10000215 Ga0265327_1000021597 481
102 3300028556 Ga0265337_1003073 Ga0265337_10030733 482
103 3300028800 Ga0265338_10001986 Ga0265338_1000198623 482
104 3300031240 Ga0265320_10000830 Ga0265320_100008304 482
105 3300046454 Ga0495592_0088223 Ga0495592_0088223_525_2093 482
106 3300046516 Ga0495628_0032864 Ga0495628_0032864_1798_3366 482
107 3300046517 Ga0495630_0031171 Ga0495630_0031171_657_2225 482
108 3300046678 Ga0495599_0029787 Ga0495599_0029787_1777_3345 482
109 3300047319 Ga0495674_0013269 Ga0495674_0013269_238_1806 482
110 3300028800 Ga0265338_10002169 Ga0265338_1000216921 483
111 3300031251 Ga0265327_10070149 Ga0265327_100701491 483
112 3300035118 Ga0373954_0014426 Ga0373954_0014426_1517_3079 483
113 3300036401 Ga0373937_0062578 Ga0373937_0062578_497_2059 483
114 3300046514 Ga0495618_0004184 Ga0495618_0004184_6426_7988 483
115 3300046535 Ga0495586_0003529 Ga0495586_0003529_1582_3144 483
116 3300046642 Ga0495634_0036328 Ga0495634_0036328_230_1792 483
117 3300046689 Ga0495613_0014837 Ga0495613_0014837_4142_5704 483
118 3300047319 Ga0495674_0072466 Ga0495674_0072466_785_2347 483
119 3300047322 Ga0495680_0022287 Ga0495680_0022287_2174_3736 483
120 3300029957 Ga0265324_10014851 Ga0265324_100148512 484
121 3300035695 Ga0373927_0002645 Ga0373927_0002645_9534_11078 486
122 3300046517 Ga0495630_0030070 Ga0495630_0030070_108_1652 486
123 3300005577 Ga0068857_100005668 Ga0068857_1000056687 487
124 3300028800 Ga0265338_10000294 Ga0265338_1000029449 487
125 3300005458 Ga0070681_10098959 Ga0070681_100989592 488
126 3300049573 Ga0501037_0077961 Ga0501037_0077961_167_1726 489
127 3300049579 Ga0501043_0016598 Ga0501043_0016598_399_1958 489
128 3300049823 Ga0501044_0008996 Ga0501044_0008996_5309_6868 489
129 3300042876 Ga0451577_0184533 Ga0451577_0184533_198_1787 490
130 3300028556 Ga0265337_1000883 Ga0265337_100088316 491
131 3300028800 Ga0265338_10003919 Ga0265338_100039191 491
132 3300028573 Ga0265334_10009399 Ga0265334_100093992 492
133 3300028800 Ga0265338_10004977 Ga0265338_1000497710 492
134 3300028800 Ga0265338_10123587 Ga0265338_101235872 492
135 3300046535 Ga0495586_0001761 Ga0495586_0001761_7267_8817 492
136 3300005841 Ga0068863_100040754 Ga0068863_1000407542 493
137 3300013296 Ga0157374_10130331 Ga0157374_101303312 493
138 3300044712 Ga0453684_0002551 Ga0453684_0002551_2321_3901 493
139 3300013308 Ga0157375_10000051 Ga0157375_1000005126 495
140 3300028800 Ga0265338_10082421 Ga0265338_100824212 496
141 3300005614 Ga0068856_100000293 Ga0068856_10000029329 497
142 3300009098 Ga0105245_10019086 Ga0105245_100190862 497
143 3300025927 Ga0207687_10072136 Ga0207687_100721363 497
144 3300026078 Ga0207702_10000448 Ga0207702_100004484 497
145 3300031344 Ga0265316_10000797 Ga0265316_1000079722 497
146 3300034816 Ga0373930_0000837 Ga0373930_0000837_1906_3483 497
147 3300035084 Ga0373928_0000101 Ga0373928_0000101_10512_12089 497
148 3300035089 Ga0373944_0000006 Ga0373944_0000006_16309_17886 497
149 3300035090 Ga0373949_0000990 Ga0373949_0000990_344_1921 497
150 3300035091 Ga0373951_0004809 Ga0373951_0004809_1183_2760 497
151 3300035112 Ga0373932_0000006 Ga0373932_0000006_95946_97523 497
152 3300035114 Ga0373939_0006612 Ga0373939_0006612_953_2530 497
153 3300035242 Ga0373962_0000020 Ga0373962_0000020_20585_22162 497
154 3300035691 Ga0373931_0000009 Ga0373931_0000009_94261_95838 497
155 3300035692 Ga0373935_0053907 Ga0373935_0053907_577_2154 497
156 3300037068 Ga0373925_0000301 Ga0373925_0000301_5699_7276 497
157 3300005327 Ga0070658_10039545 Ga0070658_100395452 498
158 3300005563 Ga0068855_100233722 Ga0068855_1002337222 498
159 3300045051 Ga0451576_0046820 Ga0451576_0046820_320_1909 498
160 3300005439 Ga0070711_100010308 Ga0070711_1000103082 501
161 3300025916 Ga0207663_10006858 Ga0207663_100068585 501
162 3300005435 Ga0070714_100040514 Ga0070714_1000405141 503
163 3300025929 Ga0207664_10001413 Ga0207664_100014136 503
164 3300049568 Ga0501031_0002815 Ga0501031_0002815_4432_5970 503
165 3300049570 Ga0501033_0024809 Ga0501033_0024809_608_2146 503
166 3300049822 Ga0501035_0005414 Ga0501035_0005414_6485_8023 503
167 3300049823 Ga0501044_0000148 Ga0501044_0000148_62782_64320 503
168 3300003320 rootH2_10009094 rootH2_100090944 513

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

411

519

0.92

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

305

370

0.91

Feature Viewer

pLDDT pTM Quality
69.54 0.37 Low
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Predicted Structure (AlphaFold2)

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