F252341

General Info

Members Datasets Scaffolds Average Seq Length
168 142 157 337

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10003473|Ga0081539_1000347317
Length 361
Sequence MAGPTVETFDDERWKPLMRATFMYGAGDVRVIDVPDPALKHPTDALVRIVRSCICGSDLHPYHNLPATAGGKSMGHESLGVVEDIGSDVATVHRGDLVVVPFAWQDNTCDFCREGLQTSCRHGGFWNAGDVGGMQAQAVRVPLADGTLVTLPVAEDSALLPSLLTLSDVFGTGHHAAVRAGVNPRTDVTVIGDGAVGLLAVLAARRLGAERIILMGRHKDRTDLGREFGASEVVAQRGEEGIEKVRELTRGDGTHTVLECVGHRPAYEQALGVVRAGGVISRVGVPQYDDGDIGWHLFGRNLTLTGGPAPARHYIEELMPDILDGTIQPGRVFDRTISLEEVPDGYRAMDRREALKVLVRP

Samples

Sample ID Description Type Environment
1 2643221615 Nocardioides sp. Root224 Isolate Unclassified
2 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
3 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
4 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
5 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
6 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
7 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
8 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
9 2902799365 Mycolicibacterium sp. P1-5 Isolate Unclassified
10 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
11 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
12 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
13 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
14 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
15 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
16 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
34 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
73 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
76 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
77 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
84 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
87 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
88 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
89 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
90 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
91 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
94 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
95 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
96 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
99 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
100 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
101 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
102 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
105 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
106 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
107 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
108 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
111 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
112 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
113 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
114 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
115 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
116 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
120 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
121 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
130 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
131 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
132 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
133 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
134 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
135 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
136 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
137 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
138 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
139 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
140 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
141 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
142 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.26
Metatranscriptomes 1.19
Isolates 6.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.74
Nodule 0
Rhizoplane 8.33
Rhizosphere 70.83
Stem 0
Stem Tuber 0
Unclassified 13.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1002963 3300000549 Bacteria 2304
2 JGI24739J22299_10003514 3300001989 Bacteria 5982
3 JGI24737J22298_10002927 3300001990 Bacteria 6050
4 JGI24735J21928_10047320 3300002067 Bacteria 1247
5 Ga0006562J51391_1160591 3300003578 Bacteria 3467
6 Ga0006562J51391_1160592 3300003578 Bacteria 3360
7 Ga0070683_100000897 3300005329 Bacteria 22135
8 Ga0070683_100058300 3300005329 Bacteria 3588
9 Ga0070660_100175005 3300005339 Bacteria 1735
10 Ga0070692_10015018 3300005345 Bacteria 3653
11 Ga0070701_10004780 3300005438 Bacteria 5534
12 Ga0070700_100000003 3300005441 Bacteria 261247
13 Ga0070700_100091590 3300005441 Bacteria 1985
14 Ga0068853_100080648 3300005539 Bacteria 2848
15 Ga0068853_100325697 3300005539 Bacteria 1425
16 Ga0068855_100095527 3300005563 Bacteria 3425
17 Ga0070664_100042751 3300005564 Bacteria 3824
18 Ga0068854_100081142 3300005578 Bacteria 2395
19 Ga0068852_100070420 3300005616 Bacteria 3068
20 Ga0068864_100169685 3300005618 Bacteria 1989
21 Ga0068864_100408831 3300005618 Bacteria 1291
22 Ga0068861_100135793 3300005719 Bacteria 2001
23 Ga0068870_10002767 3300005840 Bacteria 7371
24 Ga0081455_10023467 3300005937 Bacteria 5738
25 Ga0081540_1001638 3300005983 Bacteria 19084
26 Ga0081540_1016223 3300005983 Bacteria 4673
27 Ga0081539_10003473 3300005985 Bacteria 19258
28 Ga0075363_100013546 3300006048 Bacteria 3957
29 Ga0075370_10028963 3300006353 Bacteria 3081
30 Ga0068865_100058539 3300006881 Bacteria 2692
31 Ga0105240_10009788 3300009093 Bacteria 13534
32 Ga0105245_10139823 3300009098 Bacteria 2279
33 Ga0105243_10041415 3300009148 Bacteria 3602
34 Ga0105241_10009956 3300009174 Bacteria 6983
35 Ga0105248_10019583 3300009177 Bacteria 7490
36 Ga0105238_10039603 3300009551 Bacteria 4779
37 Ga0105249_10141807 3300009553 Bacteria 2305
38 Ga0105239_10078960 3300010375 Bacteria 3622
39 Ga0157369_10588106 3300013105 Bacteria 1149
40 Ga0163162_10083409 3300013306 Bacteria 3270
41 Ga0157372_10034900 3300013307 Bacteria 5534
42 Ga0157372_10071064 3300013307 Bacteria 3918
43 Ga0163163_10133441 3300014325 Bacteria 2523
44 Ga0157380_10429429 3300014326 Bacteria 1263
45 Ga0157377_10003396 3300014745 Bacteria 7203
46 Ga0207688_10029491 3300025901 Bacteria 3021
47 Ga0207647_10003115 3300025904 Bacteria 12457
48 Ga0207647_10005576 3300025904 Bacteria 9204
49 Ga0207643_10008081 3300025908 Bacteria 5643
50 Ga0207684_10067321 3300025910 Bacteria 3043
51 Ga0207654_10084321 3300025911 Bacteria 1921
52 Ga0207695_10126778 3300025913 Bacteria 2514
53 Ga0207671_10011607 3300025914 Bacteria 7152
54 Ga0207657_10167667 3300025919 Bacteria 1780
55 Ga0207694_10063708 3300025924 Bacteria 2872
56 Ga0207669_10143799 3300025937 Bacteria 1660
57 Ga0207711_10049158 3300025941 Bacteria 3610
58 Ga0207661_10016404 3300025944 Bacteria 5464
59 Ga0207679_10361799 3300025945 Bacteria 1267
60 Ga0207667_10443806 3300025949 Bacteria 1319
61 Ga0207640_10007659 3300025981 Bacteria 5967
62 Ga0207708_10000002 3300026075 Bacteria 411071
63 Ga0207708_10001576 3300026075 Bacteria 17022
64 Ga0207702_10178936 3300026078 Bacteria 1951
65 Ga0207648_10010465 3300026089 Bacteria 8788
66 Ga0207676_10266205 3300026095 Bacteria 1550
67 Ga0207675_100038253 3300026118 Bacteria 4477
68 Ga0207683_10044710 3300026121 Bacteria 3872
69 Ga0207698_10039914 3300026142 Bacteria 3482
70 Ga0207698_10058659 3300026142 Bacteria 2984
71 Ga0307515_10003890 3300028794 Bacteria 31178
72 Ga0307512_10000737 3300030522 Bacteria 48583
73 Ga0307512_10005068 3300030522 Bacteria 14007
74 Ga0307512_10037970 3300030522 Bacteria 4061
75 Ga0307513_10107063 3300031456 Bacteria 2800
76 Ga0307509_10053437 3300031507 Bacteria 4308
77 Ga0307508_10016118 3300031616 Bacteria 6807
78 Ga0307508_10066003 3300031616 Bacteria 3187
79 Ga0307508_10070534 3300031616 Bacteria 3067
80 Ga0307516_10023845 3300031730 Bacteria 6260
81 Ga0307416_100012726 3300032002 Bacteria 5684
82 Ga0307416_100418749 3300032002 Bacteria 1383
83 Ga0307415_100064966 3300032126 Bacteria 2541
84 Ga0307507_10001937 3300033179 Bacteria 45000
85 Ga0395898_0347058 3300037466 Bacteria 1415
86 Ga0466963_0106213 3300044694 Bacteria 1925
87 Ga0466964_0054473 3300044706 Bacteria 1649
88 Ga0466967_0004239 3300045976 Bacteria 9626
89 Ga0466967_0010122 3300045976 Bacteria 7052
90 Ga0495592_0113746 3300046454 Bacteria 1912
91 Ga0495638_0002813 3300046460 Bacteria 13930
92 Ga0495651_0000539 3300046462 Bacteria 29212
93 Ga0495651_0003480 3300046462 Bacteria 12067
94 Ga0495594_0023277 3300046499 Bacteria 3318
95 Ga0495583_0004527 3300046506 Bacteria 9901
96 Ga0495606_0002689 3300046507 Bacteria 20100
97 Ga0495620_0002363 3300046515 Bacteria 10936
98 Ga0495628_0015427 3300046516 Bacteria 6379
99 Ga0495628_0017340 3300046516 Bacteria 5996
100 Ga0495643_0006877 3300046522 Bacteria 7409
101 Ga0495648_0053531 3300046524 Bacteria 2445
102 Ga0495652_0000312 3300046529 Bacteria 57814
103 Ga0495652_0000898 3300046529 Bacteria 34141
104 Ga0495640_0008725 3300046533 Bacteria 7943
105 Ga0495645_0072854 3300046543 Bacteria 2475
106 Ga0495668_0000601 3300046616 Bacteria 43566
107 Ga0495668_0054930 3300046616 Bacteria 2200
108 Ga0495634_0038058 3300046642 Bacteria 3281
109 Ga0495635_0336439 3300046663 Bacteria 1009
110 Ga0495657_0005098 3300046675 Bacteria 10431
111 Ga0495646_0050656 3300046680 Bacteria 2516
112 Ga0495613_0047387 3300046689 Bacteria 3175
113 Ga0495624_0234709 3300046690 Bacteria 1110
114 Ga0495670_0032905 3300046691 Bacteria 2579
115 Ga0495589_0025887 3300046794 Bacteria 2974
116 Ga0495600_0042663 3300046809 Bacteria 2957
117 Ga0495581_0181110 3300047315 Bacteria 1232
118 Ga0495604_0018435 3300047317 Bacteria 5589
119 Ga0495676_0045379 3300047321 Bacteria 3578
120 Ga0495676_0081507 3300047321 Bacteria 2452
121 Ga0495680_0043995 3300047322 Bacteria 3533
122 Ga0495687_013642 3300047443 Bacteria 4225
123 Ga0495687_030009 3300047443 Bacteria 2508
124 Ga0495685_035808 3300047447 Bacteria 1705
125 Ga0495614_0026072 3300048089 Bacteria 2519
126 Ga0495614_0037336 3300048089 Bacteria 2084
127 Ga0495626_0000309 3300048091 Bacteria 51750
128 Ga0496100_0056960 3300048903 Bacteria 2558
129 Ga0496101_0072895 3300048904 Bacteria 2521
130 Ga0496102_0062521 3300048905 Bacteria 3409
131 Ga0496103_0138890 3300048906 Bacteria 1553
132 Ga0496104_0108158 3300048907 Bacteria 2664
133 Ga0496107_0034639 3300048910 Bacteria 3617
134 Ga0496108_0057149 3300048911 Bacteria 3278
135 Ga0496109_0049782 3300048912 Bacteria 3815
136 Ga0496110_0057852 3300048913 Bacteria 3414
137 Ga0496110_0400785 3300048913 Bacteria 1251
138 Ga0496111_0010453 3300048914 Bacteria 6228
139 Ga0496112_0018469 3300048915 Bacteria 6567
140 Ga0496113_0450767 3300048916 Bacteria 1034
141 Ga0496114_0078264 3300048917 Bacteria 2789
142 Ga0496121_0092085 3300048924 Bacteria 2364
143 Ga0496125_0036203 3300048928 Bacteria 4313
144 Ga0496126_0004061 3300048929 Bacteria 17762
145 nmdc:mga03n38_104130_c1 3300050490 Bacteria 1373
146 nmdc:mga03n38_22836_c1 3300050490 Bacteria 2537
147 nmdc:mga07m45_22394_c1 3300050496 Bacteria 3448
148 nmdc:mga07m45_73779_c1 3300050496 Bacteria 1943
149 Ga0495601_0010371 3300053077 Bacteria 5543
150 Ga0495619_0014157 3300053085 Bacteria 5037
151 Ga0500594_0008346 3300053118 Bacteria 2359
152 Ga0500652_003866 3300053131 Bacteria 4575
153 Ga0500559_0014581 3300053136 Bacteria 3322
154 Ga0500561_0037347 3300053137 Bacteria 1264
155 Ga0500573_0000024 3300053140 Bacteria 151713
156 Ga0500577_0019277 3300053142 Bacteria 2209
157 Ga0500645_001076 3300053730 Bacteria 15080

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046663 Ga0495635_0336439 Ga0495635_0336439_69_965 298
2 3300030522 Ga0307512_10037970 Ga0307512_100379703 306
3 3300031456 Ga0307513_10107063 Ga0307513_101070632 307
4 3300046507 Ga0495606_0002689 Ga0495606_0002689_7162_8196 310
5 3300046616 Ga0495668_0000601 Ga0495668_0000601_30555_31589 310
6 3300046690 Ga0495624_0234709 Ga0495624_0234709_15_1049 310
7 3300047315 Ga0495581_0181110 Ga0495581_0181110_29_1063 310
8 3300047321 Ga0495676_0081507 Ga0495676_0081507_47_1081 310
9 3300048089 Ga0495614_0037336 Ga0495614_0037336_23_1057 310
10 3300048091 Ga0495626_0000309 Ga0495626_0000309_30569_31603 310
11 3300005618 Ga0068864_100169685 Ga0068864_1001696851 311
12 3300047322 Ga0495680_0043995 Ga0495680_0043995_2574_3515 313
13 3300037466 Ga0395898_0347058 Ga0395898_0347058_189_1223 314
14 3300026121 Ga0207683_10044710 Ga0207683_100447102 315
15 3300048916 Ga0496113_0450767 Ga0496113_0450767_37_1023 316
16 3300005329 Ga0070683_100058300 Ga0070683_1000583004 317
17 3300005339 Ga0070660_100175005 Ga0070660_1001750052 317
18 3300005345 Ga0070692_10015018 Ga0070692_100150182 317
19 3300005438 Ga0070701_10004780 Ga0070701_100047805 317
20 3300005441 Ga0070700_100091590 Ga0070700_1000915902 317
21 3300005539 Ga0068853_100080648 Ga0068853_1000806484 317
22 3300005719 Ga0068861_100135793 Ga0068861_1001357932 317
23 3300005840 Ga0068870_10002767 Ga0068870_100027672 317
24 3300005983 Ga0081540_1016223 Ga0081540_10162233 317
25 3300006881 Ga0068865_100058539 Ga0068865_1000585393 317
26 3300009098 Ga0105245_10139823 Ga0105245_101398232 317
27 3300009148 Ga0105243_10041415 Ga0105243_100414152 317
28 3300009177 Ga0105248_10019583 Ga0105248_100195835 317
29 3300013105 Ga0157369_10588106 Ga0157369_105881061 317
30 3300013307 Ga0157372_10034900 Ga0157372_100349006 317
31 3300014325 Ga0163163_10133441 Ga0163163_101334411 317
32 3300014326 Ga0157380_10429429 Ga0157380_104294291 317
33 3300014745 Ga0157377_10003396 Ga0157377_100033967 317
34 3300025901 Ga0207688_10029491 Ga0207688_100294913 317
35 3300025908 Ga0207643_10008081 Ga0207643_100080814 317
36 3300025919 Ga0207657_10167667 Ga0207657_101676672 317
37 3300025937 Ga0207669_10143799 Ga0207669_101437992 317
38 3300025941 Ga0207711_10049158 Ga0207711_100491582 317
39 3300026075 Ga0207708_10001576 Ga0207708_100015768 317
40 3300026089 Ga0207648_10010465 Ga0207648_100104653 317
41 3300026118 Ga0207675_100038253 Ga0207675_1000382532 317
42 3300026142 Ga0207698_10058659 Ga0207698_100586593 317
43 3300032002 Ga0307416_100418749 Ga0307416_1004187492 317
44 3300032126 Ga0307415_100064966 Ga0307415_1000649662 317
45 3300048913 Ga0496110_0400785 Ga0496110_0400785_99_1148 317
46 3300046616 Ga0495668_0054930 Ga0495668_0054930_299_1330 321
47 3300046691 Ga0495670_0032905 Ga0495670_0032905_1208_2239 321
48 3300048929 Ga0496126_0004061 Ga0496126_0004061_8736_9755 324
49 3300053136 Ga0500559_0014581 Ga0500559_0014581_1396_2415 324
50 3300053137 Ga0500561_0037347 Ga0500561_0037347_109_1128 324
51 3300053730 Ga0500645_001076 Ga0500645_001076_12550_13569 324
52 3300048924 Ga0496121_0092085 Ga0496121_0092085_263_1279 325
53 3300046460 Ga0495638_0002813 Ga0495638_0002813_1423_2442 326
54 3300006048 Ga0075363_100013546 Ga0075363_1000135464 327
55 3300046642 Ga0495634_0038058 Ga0495634_0038058_481_1515 330
56 3300047321 Ga0495676_0045379 Ga0495676_0045379_1252_2286 330
57 3300048089 Ga0495614_0026072 Ga0495614_0026072_1250_2284 330
58 3300046499 Ga0495594_0023277 Ga0495594_0023277_2174_3208 332
59 3300003578 Ga0006562J51391_1160591 Ga0006562J51391_11605913 335
60 3300003578 Ga0006562J51391_1160592 Ga0006562J51391_11605922 335
61 3300013306 Ga0163162_10083409 Ga0163162_100834095 338
62 3300013307 Ga0157372_10071064 Ga0157372_100710645 338
63 3300048903 Ga0496100_0056960 Ga0496100_0056960_1193_2233 338
64 3300048904 Ga0496101_0072895 Ga0496101_0072895_473_1513 338
65 3300048905 Ga0496102_0062521 Ga0496102_0062521_1695_2735 338
66 3300048906 Ga0496103_0138890 Ga0496103_0138890_187_1227 338
67 3300048907 Ga0496104_0108158 Ga0496104_0108158_1299_2339 338
68 3300048910 Ga0496107_0034639 Ga0496107_0034639_1105_2145 338
69 3300048912 Ga0496109_0049782 Ga0496109_0049782_1299_2339 338
70 3300048913 Ga0496110_0057852 Ga0496110_0057852_1055_2095 338
71 3300048914 Ga0496111_0010453 Ga0496111_0010453_3814_4854 338
72 3300048915 Ga0496112_0018469 Ga0496112_0018469_1187_2227 338
73 3300048917 Ga0496114_0078264 Ga0496114_0078264_188_1228 338
74 iso_pu_bacteria 2870628048 2870631486 338
75 3300005329 Ga0070683_100000897 Ga0070683_1000008973 339
76 3300005441 Ga0070700_100000003 Ga0070700_100000003177 339
77 3300005539 Ga0068853_100325697 Ga0068853_1003256971 339
78 3300005563 Ga0068855_100095527 Ga0068855_1000955276 339
79 3300005564 Ga0070664_100042751 Ga0070664_1000427513 339
80 3300005578 Ga0068854_100081142 Ga0068854_1000811424 339
81 3300005616 Ga0068852_100070420 Ga0068852_1000704202 339
82 3300005937 Ga0081455_10023467 Ga0081455_100234676 339
83 3300005983 Ga0081540_1001638 Ga0081540_10016382 339
84 3300005985 Ga0081539_10003473 Ga0081539_1000347317 339
85 3300009093 Ga0105240_10009788 Ga0105240_100097883 339
86 3300009174 Ga0105241_10009956 Ga0105241_100099564 339
87 3300009551 Ga0105238_10039603 Ga0105238_100396033 339
88 3300025904 Ga0207647_10003115 Ga0207647_100031158 339
89 3300025911 Ga0207654_10084321 Ga0207654_100843211 339
90 3300025913 Ga0207695_10126778 Ga0207695_101267781 339
91 3300025914 Ga0207671_10011607 Ga0207671_100116074 339
92 3300025924 Ga0207694_10063708 Ga0207694_100637081 339
93 3300025944 Ga0207661_10016404 Ga0207661_100164042 339
94 3300025945 Ga0207679_10361799 Ga0207679_103617991 339
95 3300025949 Ga0207667_10443806 Ga0207667_104438061 339
96 3300025981 Ga0207640_10007659 Ga0207640_100076594 339
97 3300026075 Ga0207708_10000002 Ga0207708_10000002316 339
98 3300026078 Ga0207702_10178936 Ga0207702_101789362 339
99 3300026142 Ga0207698_10039914 Ga0207698_100399143 339
100 3300028794 Ga0307515_10003890 Ga0307515_1000389013 339
101 3300030522 Ga0307512_10000737 Ga0307512_1000073720 339
102 3300030522 Ga0307512_10005068 Ga0307512_1000506811 339
103 3300031507 Ga0307509_10053437 Ga0307509_100534375 339
104 3300031616 Ga0307508_10016118 Ga0307508_100161183 339
105 3300031616 Ga0307508_10066003 Ga0307508_100660032 339
106 3300031616 Ga0307508_10070534 Ga0307508_100705342 339
107 3300031730 Ga0307516_10023845 Ga0307516_100238452 339
108 3300033179 Ga0307507_10001937 Ga0307507_1000193720 339
109 3300044694 Ga0466963_0106213 Ga0466963_0106213_838_1872 339
110 3300044706 Ga0466964_0054473 Ga0466964_0054473_207_1241 339
111 3300045976 Ga0466967_0004239 Ga0466967_0004239_4582_5616 339
112 3300045976 Ga0466967_0010122 Ga0466967_0010122_2107_3141 339
113 3300046454 Ga0495592_0113746 Ga0495592_0113746_368_1402 339
114 3300046462 Ga0495651_0000539 Ga0495651_0000539_3639_4673 339
115 3300046462 Ga0495651_0003480 Ga0495651_0003480_6544_7578 339
116 3300046506 Ga0495583_0004527 Ga0495583_0004527_4645_5679 339
117 3300046515 Ga0495620_0002363 Ga0495620_0002363_4436_5470 339
118 3300046516 Ga0495628_0015427 Ga0495628_0015427_4589_5623 339
119 3300046516 Ga0495628_0017340 Ga0495628_0017340_2674_3708 339
120 3300046522 Ga0495643_0006877 Ga0495643_0006877_890_1924 339
121 3300046524 Ga0495648_0053531 Ga0495648_0053531_38_1072 339
122 3300046529 Ga0495652_0000312 Ga0495652_0000312_53647_54681 339
123 3300046529 Ga0495652_0000898 Ga0495652_0000898_8472_9506 339
124 3300046533 Ga0495640_0008725 Ga0495640_0008725_6190_7224 339
125 3300046543 Ga0495645_0072854 Ga0495645_0072854_354_1388 339
126 3300046675 Ga0495657_0005098 Ga0495657_0005098_1724_2758 339
127 3300046680 Ga0495646_0050656 Ga0495646_0050656_260_1294 339
128 3300046689 Ga0495613_0047387 Ga0495613_0047387_186_1220 339
129 3300046809 Ga0495600_0042663 Ga0495600_0042663_682_1716 339
130 3300047317 Ga0495604_0018435 Ga0495604_0018435_1448_2482 339
131 3300047443 Ga0495687_013642 Ga0495687_013642_2620_3654 339
132 3300047443 Ga0495687_030009 Ga0495687_030009_1229_2263 339
133 3300047447 Ga0495685_035808 Ga0495685_035808_622_1656 339
134 3300050490 nmdc:mga03n38_22836_c1 nmdc:mga03n38_22836_c1_1463_2482 339
135 3300050496 nmdc:mga07m45_22394_c1 nmdc:mga07m45_22394_c1_1631_2650 339
136 3300053077 Ga0495601_0010371 Ga0495601_0010371_352_1386 339
137 3300053085 Ga0495619_0014157 Ga0495619_0014157_3202_4236 339
138 3300053118 Ga0500594_0008346 Ga0500594_0008346_847_1881 339
139 3300053131 Ga0500652_003866 Ga0500652_003866_987_2021 339
140 3300053142 Ga0500577_0019277 Ga0500577_0019277_1165_2184 339
141 iso_pu_bacteria 2887478801 2887480429 339
142 iso_pu_bacteria 2891395885 2891402274 339
143 iso_pu_bacteria 2902799365 2902802273 339
144 3300000549 LJQas_1002963 LJQas_10029632 340
145 3300001989 JGI24739J22299_10003514 JGI24739J22299_100035144 340
146 3300001990 JGI24737J22298_10002927 JGI24737J22298_100029274 340
147 3300002067 JGI24735J21928_10047320 JGI24735J21928_100473201 340
148 3300005618 Ga0068864_100408831 Ga0068864_1004088311 340
149 3300006353 Ga0075370_10028963 Ga0075370_100289632 340
150 3300009553 Ga0105249_10141807 Ga0105249_101418071 340
151 3300010375 Ga0105239_10078960 Ga0105239_100789602 340
152 3300025904 Ga0207647_10005576 Ga0207647_100055764 340
153 3300025910 Ga0207684_10067321 Ga0207684_100673213 340
154 3300026095 Ga0207676_10266205 Ga0207676_102662052 340
155 3300032002 Ga0307416_100012726 Ga0307416_1000127261 340
156 3300046794 Ga0495589_0025887 Ga0495589_0025887_1188_2231 340
157 3300048911 Ga0496108_0057149 Ga0496108_0057149_1099_2136 340
158 3300048928 Ga0496125_0036203 Ga0496125_0036203_746_1783 340
159 3300050490 nmdc:mga03n38_104130_c1 nmdc:mga03n38_104130_c1_256_1293 340
160 3300050496 nmdc:mga07m45_73779_c1 nmdc:mga07m45_73779_c1_488_1525 340
161 3300053140 Ga0500573_0000024 Ga0500573_0000024_93540_94586 340
162 iso_pu_bacteria 2643221615 2644093351 340
163 iso_pu_bacteria 2643221657 2644322961 340
164 iso_pu_bacteria 2721755702 2723643917 340
165 iso_pu_bacteria 2808606447 2809225887 340
166 iso_pu_bacteria 2852632344 2852635218 340
167 iso_pu_bacteria 2904535858 2904537081 340
168 iso_pu_bacteria 2939582691 2939586185 340

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

41

153

0.86

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

195

323

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4cpd-assembly1.cif.gz_D alcohol dehydrogenase tadh from thermus sp. atn1 0.9285 8 339
4cpd-assembly2.cif.gz_C alcohol dehydrogenase tadh from thermus sp. atn1 0.9229 1 340
5yln-assembly2.cif.gz_D zinc dependent alcohol dehydrogenase 2 from streptococcus pneumonia - apo form 0.9205 2 339
4cpd-assembly2.cif.gz_C alcohol dehydrogenase tadh from thermus sp. atn1 0.9177 1 340
4cpd-assembly2.cif.gz_B alcohol dehydrogenase tadh from thermus sp. atn1 0.9168 1 339
ID Description Score Start End Superfamily
af_O53533_167_304_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9306 152 285 3.90.180.10
af_P77316_1_168_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9212 1 130 3.90.180.10
af_O07737_155_282_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.917 154 283 3.40.50.720
4cpdB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9167 152 286 3.40.50.720
af_B4G1G0_229_356_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9115 158 282 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A847KL26-F1-model_v4 Zinc-binding dehydrogenase 0.9598 36 340 GO:0008270
GO:0016491
AF-A0A2T0VX93-F1-model_v4 Enoyl reductase (ER) domain-containing protein 0.9577 1 340 GO:0008270
GO:0016616
AF-A0A1H9KCI4-F1-model_v4 Alcohol dehydrogenase-like C-terminal domain-containing protein 0.957 178 340 GO:0016491
GO:0046872
AF-A0A5Q8CFH7-F1-model_v4 IMP dehydrogenase 0.9566 1 222 GO:0008270
GO:0016491
AF-A0A1Q8XJM0-F1-model_v4 deleted 0.9507 1 340

Feature Viewer

pLDDT pTM Quality
95.9 0.93 High
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Predicted Structure (AlphaFold2)

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