F249907

General Info

Members Datasets Scaffolds Average Seq Length
167 112 334 143

Family's Representative Sequence

Representative Sequence 3300005365|Ga0070688_100811438|Ga0070688_1008114382
Length 162
Sequence MLGLPALLNPPRAGSRPARNLMYSKILVALENSKADHALVPHVTELAKRLHSHLLLVHVADGWAARNFDLLKLAESEEMRTDRAYLESTAQSLRAAGLSVTVHLALGDPPREILKTAQTEACDLIAMTSHGHRLIGDLLFGSTIHEVRHKSSIPILLVRASS

Samples

Sample ID Description Type Environment
1 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
67 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
68 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
69 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
72 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
73 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
74 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
75 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
76 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
77 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
80 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
81 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
82 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
83 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
91 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
96 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
97 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
98 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
101 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
102 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
108 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
111 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
112 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.59
Nodule 0
Rhizoplane 0
Rhizosphere 95.81
Stem 0
Stem Tuber 0
Unclassified 31.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070688_100811438 3300005365 Bacteria 732
2 Ga0065712_10201338 3300005290 Bacteria 1087
3 Ga0070683_100816180 3300005329 Bacteria 894
4 Ga0070690_100454338 3300005330 Unclassified 950
5 Ga0070689_100004989 3300005340 Bacteria 9016
6 Ga0070689_100138252 3300005340 Bacteria 1957
7 Ga0070689_100749859 3300005340 Unclassified 856
8 Ga0070689_100764933 3300005340 Unclassified 847
9 Ga0070675_100755226 3300005354 Unclassified 888
10 Ga0070673_100963798 3300005364 Bacteria 793
11 Ga0070688_100045404 3300005365 Bacteria 2714
12 Ga0070688_100391068 3300005365 Bacteria 1027
13 Ga0070709_11657988 3300005434 Unclassified 521
14 Ga0070681_10413627 3300005458 Bacteria 1260
15 Ga0070685_10030355 3300005466 Bacteria 3011
16 Ga0070707_100741920 3300005468 Bacteria 945
17 Ga0070684_100304635 3300005535 Bacteria 1462
18 Ga0068853_102257967 3300005539 Unclassified 527
19 Ga0070686_100152979 3300005544 Bacteria 1617
20 Ga0070686_100673665 3300005544 Unclassified 822
21 Ga0070693_100156373 3300005547 Unclassified 1448
22 Ga0070693_100735695 3300005547 Unclassified 725
23 Ga0068857_100010665 3300005577 Bacteria 7994
24 Ga0070702_100234339 3300005615 Bacteria 1235
25 Ga0068859_100103573 3300005617 Bacteria 2904
26 Ga0068859_101030424 3300005617 Unclassified 904
27 Ga0068859_101113224 3300005617 Bacteria 869
28 Ga0068859_102683265 3300005617 Bacteria 548
29 Ga0068864_100018083 3300005618 Bacteria 5883
30 Ga0068861_101446774 3300005719 Bacteria 673
31 Ga0068863_100095448 3300005841 Bacteria 2822
32 Ga0068863_100823262 3300005841 Unclassified 926
33 Ga0068862_101248856 3300005844 Unclassified 743
34 Ga0075368_10020201 3300006042 Bacteria 2519
35 Ga0070716_100632048 3300006173 Unclassified 809
36 Ga0075367_10053823 3300006178 Bacteria 2386
37 Ga0097621_100518109 3300006237 Bacteria 1082
38 Ga0075370_10086831 3300006353 Bacteria 1802
39 Ga0068871_100030155 3300006358 Bacteria 4269
40 Ga0068871_100769295 3300006358 Unclassified 886
41 Ga0075433_10080187 3300006852 Bacteria 2877
42 Ga0075434_100490080 3300006871 Bacteria 1250
43 Ga0075434_100730465 3300006871 Bacteria 1007
44 Ga0097620_100103575 3300006931 Bacteria 2904
45 Ga0097620_101030676 3300006931 Unclassified 904
46 Ga0097620_101112941 3300006931 Bacteria 869
47 Ga0097620_102683292 3300006931 Bacteria 548
48 Ga0105240_10393309 3300009093 Bacteria 1563
49 Ga0105245_10691473 3300009098 Unclassified 1052
50 Ga0105247_10552653 3300009101 Bacteria 847
51 Ga0105243_10667424 3300009148 Bacteria 1009
52 Ga0105241_10127850 3300009174 Bacteria 2054
53 Ga0105242_10144209 3300009176 Unclassified 2070
54 Ga0105248_11579337 3300009177 Unclassified 743
55 Ga0105249_10253199 3300009553 Bacteria 1747
56 Ga0099796_10396802 3300010159 Unclassified 604
57 Ga0157378_10059910 3300013297 Bacteria 3397
58 Ga0157378_10497484 3300013297 Bacteria 1217
59 Ga0157378_11447592 3300013297 Bacteria 731
60 Ga0163162_11436576 3300013306 Unclassified 785
61 Ga0157372_12499397 3300013307 Unclassified 593
62 Ga0157375_10000016 3300013308 Bacteria 295002
63 Ga0157375_11117459 3300013308 Unclassified 923
64 Ga0157375_11929558 3300013308 Bacteria 701
65 Ga0157375_13304522 3300013308 Bacteria 537
66 Ga0163163_10000416 3300014325 Bacteria 39634
67 Ga0163163_10046440 3300014325 Bacteria 4266
68 Ga0157380_10546785 3300014326 Bacteria 1135
69 Ga0157377_10653917 3300014745 Bacteria 757
70 Ga0157379_10284470 3300014968 Bacteria 1505
71 Ga0157379_10563285 3300014968 Bacteria 1061
72 Ga0157376_11337467 3300014969 Unclassified 747
73 Ga0207682_10235703 3300025893 Bacteria 849
74 Ga0207680_10595500 3300025903 Bacteria 791
75 Ga0207654_10585943 3300025911 Bacteria 795
76 Ga0207695_10798039 3300025913 Bacteria 824
77 Ga0207695_11305991 3300025913 Unclassified 606
78 Ga0207646_10403170 3300025922 Bacteria 1235
79 Ga0207646_10441622 3300025922 Bacteria 1174
80 Ga0207659_10242016 3300025926 Unclassified 1460
81 Ga0207659_11662601 3300025926 Unclassified 544
82 Ga0207687_10481105 3300025927 Bacteria 1034
83 Ga0207687_10518162 3300025927 Unclassified 997
84 Ga0207686_10282513 3300025934 Unclassified 1226
85 Ga0207670_10001729 3300025936 Bacteria 11401
86 Ga0207670_10112759 3300025936 Bacteria 1963
87 Ga0207670_10173621 3300025936 Bacteria 1618
88 Ga0207670_10643982 3300025936 Bacteria 873
89 Ga0207670_11117287 3300025936 Unclassified 666
90 Ga0207665_10301679 3300025939 Unclassified 1197
91 Ga0207689_10602180 3300025942 Bacteria 924
92 Ga0207708_10902101 3300026075 Unclassified 765
93 Ga0207641_10067961 3300026088 Bacteria 3054
94 Ga0207641_10091510 3300026088 Bacteria 2662
95 Ga0207641_10524785 3300026088 Bacteria 1152
96 Ga0207648_10635122 3300026089 Bacteria 986
97 Ga0207648_11321952 3300026089 Bacteria 677
98 Ga0207676_10117509 3300026095 Bacteria 2237
99 Ga0207674_10015658 3300026116 Bacteria 8325
100 Ga0209813_10035466 3300027866 Bacteria 1494
101 Ga0265326_10055544 3300028558 Unclassified 1120
102 Ga0265326_10119449 3300028558 Unclassified 749
103 Ga0265319_1008475 3300028563 Bacteria 4501
104 Ga0265318_10148410 3300028577 Bacteria 860
105 Ga0265338_10000032 3300028800 Bacteria 257580
106 Ga0265338_10000440 3300028800 Bacteria 74544
107 Ga0265338_10019551 3300028800 Bacteria 7177
108 Ga0265324_10000892 3300029957 Bacteria 18980
109 Ga0265324_10012110 3300029957 Bacteria 3264
110 Ga0265332_10223560 3300031238 Bacteria 781
111 Ga0265320_10022958 3300031240 Bacteria 3329
112 Ga0265320_10037425 3300031240 Bacteria 2443
113 Ga0265340_10196488 3300031247 Bacteria 908
114 Ga0265339_10027918 3300031249 Bacteria 3214
115 Ga0265316_10108552 3300031344 Bacteria 2104
116 Ga0307508_10412999 3300031616 Bacteria 941
117 Ga0265314_10108086 3300031711 Bacteria 1773
118 Ga0373954_0172831 3300035118 Unclassified 1058
119 Ga0373955_0369062 3300035172 Unclassified 870
120 Ga0373931_0091716 3300035691 Bacteria 1694
121 Ga0373931_0114383 3300035691 Bacteria 1535
122 Ga0373927_0459586 3300035695 Bacteria 841
123 Ga0373937_0431791 3300036401 Bacteria 1250
124 Ga0373925_0876622 3300037068 Bacteria 740
125 Ga0451577_1364527 3300042876 Unclassified 629
126 Ga0453683_0783621 3300044673 Unclassified 627
127 Ga0453684_0018357 3300044712 Bacteria 10741
128 Ga0453684_1290773 3300044712 Unclassified 762
129 Ga0453684_2299330 3300044712 Unclassified 536
130 Ga0451576_0086176 3300045051 Bacteria 3267
131 Ga0451576_0087943 3300045051 Bacteria 3232
132 Ga0451576_0228918 3300045051 Bacteria 1941
133 Ga0451576_0263987 3300045051 Unclassified 1800
134 Ga0451576_0359565 3300045051 Bacteria 1524
135 Ga0451576_0519916 3300045051 Bacteria 1250
136 Ga0451576_0719211 3300045051 Bacteria 1049
137 Ga0451576_1254049 3300045051 Bacteria 773
138 Ga0495653_0902812 3300046463 Unclassified 526
139 Ga0495582_0090729 3300046473 Bacteria 1703
140 Ga0495608_0685301 3300046511 Unclassified 611
141 Ga0495628_0303261 3300046516 Bacteria 1182
142 Ga0495630_1270719 3300046517 Unclassified 555
143 Ga0495586_0024139 3300046535 Bacteria 3248
144 Ga0495586_0380501 3300046535 Bacteria 812
145 Ga0495645_0215570 3300046543 Unclassified 1294
146 Ga0495635_0662348 3300046663 Unclassified 679
147 Ga0495635_0876244 3300046663 Unclassified 576
148 Ga0495599_0049267 3300046678 Bacteria 2640
149 Ga0495669_0300332 3300046684 Unclassified 774
150 Ga0495613_0043642 3300046689 Bacteria 3317
151 Ga0495581_0605401 3300047315 Unclassified 635
152 Ga0495636_0167578 3300047318 Bacteria 992
153 Ga0495675_0344145 3300047444 Unclassified 878
154 Ga0501036_1680237 3300049572 Bacteria 512
155 Ga0501043_0644223 3300049579 Bacteria 779
156 Ga0501083_0016848 3300049744 Bacteria 5104
157 Ga0501083_0040659 3300049744 Bacteria 3156
158 Ga0501044_0033643 3300049823 Bacteria 5384
159 nmdc:mga06z11_62595_c1 3300050494 Bacteria 1944
160 nmdc:mga07m45_97812_c1 3300050496 Bacteria 1684
161 nmdc:mga08y16_363700_c1 3300050511 Bacteria 1485
162 nmdc:mga0n895_1033543_c1 3300050512 Unclassified 801
163 nmdc:mga0n895_356885_c1 3300050512 Unclassified 1480
164 nmdc:mga0n895_731062_c1 3300050512 Bacteria 984
165 nmdc:mga0a205_593201_c1 3300050515 Bacteria 961
166 nmdc:mga0a205_7103_c1 3300050515 Bacteria 10116
167 Ga0495601_0059094 3300053077 Unclassified 2431
168 Ga0070688_100811438
169 Ga0065712_10201338
170 Ga0070683_100816180
171 Ga0070690_100454338
172 Ga0070689_100004989
173 Ga0070689_100138252
174 Ga0070689_100749859
175 Ga0070689_100764933
176 Ga0070675_100755226
177 Ga0070673_100963798
178 Ga0070688_100045404
179 Ga0070688_100391068
180 Ga0070709_11657988
181 Ga0070681_10413627
182 Ga0070685_10030355
183 Ga0070707_100741920
184 Ga0070684_100304635
185 Ga0068853_102257967
186 Ga0070686_100152979
187 Ga0070686_100673665
188 Ga0070693_100156373
189 Ga0070693_100735695
190 Ga0068857_100010665
191 Ga0070702_100234339
192 Ga0068859_100103573
193 Ga0068859_101030424
194 Ga0068859_101113224
195 Ga0068859_102683265
196 Ga0068864_100018083
197 Ga0068861_101446774
198 Ga0068863_100095448
199 Ga0068863_100823262
200 Ga0068862_101248856
201 Ga0075368_10020201
202 Ga0070716_100632048
203 Ga0075367_10053823
204 Ga0097621_100518109
205 Ga0075370_10086831
206 Ga0068871_100030155
207 Ga0068871_100769295
208 Ga0075433_10080187
209 Ga0075434_100490080
210 Ga0075434_100730465
211 Ga0097620_100103575
212 Ga0097620_101030676
213 Ga0097620_101112941
214 Ga0097620_102683292
215 Ga0105240_10393309
216 Ga0105245_10691473
217 Ga0105247_10552653
218 Ga0105243_10667424
219 Ga0105241_10127850
220 Ga0105242_10144209
221 Ga0105248_11579337
222 Ga0105249_10253199
223 Ga0099796_10396802
224 Ga0157378_10059910
225 Ga0157378_10497484
226 Ga0157378_11447592
227 Ga0163162_11436576
228 Ga0157372_12499397
229 Ga0157375_10000016
230 Ga0157375_11117459
231 Ga0157375_11929558
232 Ga0157375_13304522
233 Ga0163163_10000416
234 Ga0163163_10046440
235 Ga0157380_10546785
236 Ga0157377_10653917
237 Ga0157379_10284470
238 Ga0157379_10563285
239 Ga0157376_11337467
240 Ga0207682_10235703
241 Ga0207680_10595500
242 Ga0207654_10585943
243 Ga0207695_10798039
244 Ga0207695_11305991
245 Ga0207646_10403170
246 Ga0207646_10441622
247 Ga0207659_10242016
248 Ga0207659_11662601
249 Ga0207687_10481105
250 Ga0207687_10518162
251 Ga0207686_10282513
252 Ga0207670_10001729
253 Ga0207670_10112759
254 Ga0207670_10173621
255 Ga0207670_10643982
256 Ga0207670_11117287
257 Ga0207665_10301679
258 Ga0207689_10602180
259 Ga0207708_10902101
260 Ga0207641_10067961
261 Ga0207641_10091510
262 Ga0207641_10524785
263 Ga0207648_10635122
264 Ga0207648_11321952
265 Ga0207676_10117509
266 Ga0207674_10015658
267 Ga0209813_10035466
268 Ga0265326_10055544
269 Ga0265326_10119449
270 Ga0265319_1008475
271 Ga0265318_10148410
272 Ga0265338_10000032
273 Ga0265338_10000440
274 Ga0265338_10019551
275 Ga0265324_10000892
276 Ga0265324_10012110
277 Ga0265332_10223560
278 Ga0265320_10022958
279 Ga0265320_10037425
280 Ga0265340_10196488
281 Ga0265339_10027918
282 Ga0265316_10108552
283 Ga0307508_10412999
284 Ga0265314_10108086
285 Ga0373954_0172831
286 Ga0373955_0369062
287 Ga0373931_0091716
288 Ga0373931_0114383
289 Ga0373927_0459586
290 Ga0373937_0431791
291 Ga0373925_0876622
292 Ga0451577_1364527
293 Ga0453683_0783621
294 Ga0453684_0018357
295 Ga0453684_1290773
296 Ga0453684_2299330
297 Ga0451576_0086176
298 Ga0451576_0087943
299 Ga0451576_0228918
300 Ga0451576_0263987
301 Ga0451576_0359565
302 Ga0451576_0519916
303 Ga0451576_0719211
304 Ga0451576_1254049
305 Ga0495653_0902812
306 Ga0495582_0090729
307 Ga0495608_0685301
308 Ga0495628_0303261
309 Ga0495630_1270719
310 Ga0495586_0024139
311 Ga0495586_0380501
312 Ga0495645_0215570
313 Ga0495635_0662348
314 Ga0495635_0876244
315 Ga0495599_0049267
316 Ga0495669_0300332
317 Ga0495613_0043642
318 Ga0495581_0605401
319 Ga0495636_0167578
320 Ga0495675_0344145
321 Ga0501036_1680237
322 Ga0501043_0644223
323 Ga0501083_0016848
324 Ga0501083_0040659
325 Ga0501044_0033643
326 nmdc:mga06z11_62595_c1
327 nmdc:mga07m45_97812_c1
328 nmdc:mga08y16_363700_c1
329 nmdc:mga0n895_1033543_c1
330 nmdc:mga0n895_356885_c1
331 nmdc:mga0n895_731062_c1
332 nmdc:mga0a205_593201_c1
333 nmdc:mga0a205_7103_c1
334 Ga0495601_0059094

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00582

Usp

Universal stress protein family

22

159

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3loq-assembly1.cif.gz_A the crystal structure of a universal stress protein from archaeoglobus fulgidus dsm 4304 0.8428 3 140
5ahw-assembly1.cif.gz_B crystal structure of universal stress protein msmeg_3811 in complex with camp 0.8251 2 140
3loq-assembly2.cif.gz_B the crystal structure of a universal stress protein from archaeoglobus fulgidus dsm 4304 0.8247 3 140
5ahw-assembly3.cif.gz_E crystal structure of universal stress protein msmeg_3811 in complex with camp 0.8221 2 140
3mt0-assembly1.cif.gz_A the crystal structure of a functionally unknown protein pa1789 from pseudomonas aeruginosa pao1 0.8143 2 136
ID Description Score Start End Superfamily
2pfsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8897 2 138 3.40.50.620
2pfsA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8602 2 138 3.40.50.620
3loqB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8361 3 140 3.40.50.620
5ahwB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8251 2 140 3.40.50.620
1mjhA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.814 1 141 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A2V6CJ74-F1-model_v4 Universal stress protein 0.9851 1 94
AF-A0A1G3ZHE9-F1-model_v4 Universal stress protein UspA 0.9835 1 114
AF-A0A538PDV1-F1-model_v4 Universal stress protein 0.981 1 114
AF-A0A1G3ZHE9-F1-model_v4 Universal stress protein UspA 0.9751 1 114
AF-A0A2V6CJ74-F1-model_v4 Universal stress protein 0.9649 1 94

Map