F249486

General Info

Members Datasets Scaffolds Average Seq Length
166 130 332 357

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8008574985|8008577027
Length 413
Sequence PVFGRESVPTSPPVERHRTAAAKGTVIVRRRAVPAALAVAALLLVAGCSSDGGGAPGGTPGATASGATASGHGTAPAAPLPPAKGSVEVLRTVAEGLKTPWGLAPLPGGGLLVSSRNEGTISRIDEKTGRTTELGTVSGVSPAGEGGLLGIALSPDFASDHMIYAYFTSASDNRIVRMLYDERKPAGEQLGAPDTVFKGIPKGVIHNGGRIAFGPDRMLYAGTGESGEKGLAQDRKSLGGKILRLTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDRQRLFASEFGQDTWDELNAIAPGGDYGWPRAEGRSSEAGLHNPVAQWHTDDASPSGIAYVNGVIWMAGLKGARLWRVPLNGTSASAAPQAFLTGAYGRLRTVVPAGGDRLWLVTSNTDGRGTPKKGDDRVLELRVR

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
5 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
6 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
7 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
8 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
9 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
10 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
11 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
12 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
13 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
14 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
15 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
16 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
17 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
18 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
19 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
20 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
21 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
22 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
23 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
24 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
25 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
26 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
27 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
28 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
29 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
30 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
31 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
32 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
33 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
34 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
35 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
36 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
37 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
38 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
39 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
40 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
41 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
42 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
43 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
44 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
45 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
46 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
47 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
48 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
49 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
50 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
51 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
52 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
53 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
54 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
55 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
56 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
57 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
58 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
59 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
60 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
72 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
73 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
74 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
77 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
78 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
79 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
80 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
81 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
82 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
83 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
84 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
85 2643221548 Streptomyces sp. Root55 Isolate Unclassified
86 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
87 2643221670 Streptomyces sp. Root431 Isolate Unclassified
88 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
89 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
90 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
91 2734482000 Kineosporia rhizophila JCM 9960 Isolate Unclassified
92 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
93 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
94 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
95 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
96 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
97 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
98 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
99 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
100 2867428634 Streptomyces sp. RP5T Isolate Unclassified
101 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
102 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
103 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
104 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
105 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
106 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
107 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
108 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
109 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
110 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
111 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
112 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
113 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
114 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
115 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
116 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
117 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
118 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
119 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
120 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
121 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
122 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
123 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
124 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
125 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
126 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
127 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
128 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
129 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
130 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 68.07
Metatranscriptomes 0.6
Isolates 31.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.81
Nodule 0.6
Rhizoplane 0.6
Rhizosphere 83.13
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10021267 3300001990 Bacteria 2069
2 rootH2_10034202 3300003320 Bacteria 4147
3 Ga0006562J51391_1069589 3300003578 Bacteria 1456
4 Ga0068853_100093660 3300005539 Bacteria 2645
5 Ga0081455_10041755 3300005937 Bacteria 4030
6 Ga0075363_100139507 3300006048 Bacteria 1364
7 Ga0182007_10001731 3300015262 Bacteria 11493
8 Ga0207426_1016444 3300025302 Bacteria 2656
9 Ga0307508_10000366 3300031616 Bacteria 54777
10 Ga0395900_0067162 3300037418 Bacteria 3684
11 Ga0395898_0026426 3300037466 Bacteria 5840
12 Ga0395898_0032279 3300037466 Bacteria 5226
13 Ga0439436_0001131 3300041404 Bacteria 7559
14 Ga0439439_0006125 3300041406 Bacteria 2773
15 Ga0451853_1264641 3300041512 Bacteria 3946
16 Ga0439448_0008229 3300042005 Bacteria 3048
17 Ga0439449_0008688 3300042007 Bacteria 3856
18 Ga0439449_0024717 3300042007 Bacteria 2245
19 Ga0439457_000078 3300042014 Bacteria 21545
20 Ga0450894_000139 3300042131 Bacteria 12787
21 Ga0450898_000258 3300042134 Bacteria 5846
22 Ga0450903_000030 3300042138 Bacteria 28715
23 Ga0450906_006891 3300042145 Bacteria 2270
24 Ga0466969_0013109 3300044656 Bacteria 4369
25 Ga0466969_0060119 3300044656 Bacteria 1847
26 Ga0466972_0002471 3300044658 Bacteria 9145
27 Ga0466972_0009589 3300044658 Bacteria 4859
28 Ga0466972_0014129 3300044658 Bacteria 4001
29 Ga0466965_0021933 3300044683 Bacteria 3077
30 Ga0466965_0046234 3300044683 Bacteria 2154
31 Ga0466965_0099734 3300044683 Bacteria 1484
32 Ga0466966_0007098 3300044684 Bacteria 7424
33 Ga0466961_0000283 3300044693 Bacteria 33652
34 Ga0466961_0005708 3300044693 Bacteria 7874
35 Ga0466963_0001947 3300044694 Bacteria 11320
36 Ga0466963_0002157 3300044694 Bacteria 10889
37 Ga0466964_0021715 3300044706 Bacteria 2484
38 Ga0466971_0001608 3300044719 Bacteria 9523
39 Ga0466968_0013094 3300044735 Bacteria 3256
40 Ga0466970_0009918 3300044765 Bacteria 4821
41 Ga0466957_0047679 3300044842 Bacteria 2603
42 Ga0466959_0000785 3300045049 Bacteria 18634
43 Ga0466958_0006284 3300045836 Bacteria 6453
44 Ga0466967_0000551 3300045976 Bacteria 18246
45 Ga0466967_0026951 3300045976 Bacteria 4771
46 Ga0495603_0000318 3300046455 Bacteria 25901
47 Ga0495629_0002155 3300046459 Bacteria 15209
48 Ga0495651_0128240 3300046462 Bacteria 1855
49 Ga0495662_0047150 3300046476 Bacteria 2080
50 Ga0495594_0002209 3300046499 Bacteria 10123
51 Ga0495618_0131191 3300046514 Bacteria 1603
52 Ga0495620_0001945 3300046515 Bacteria 12099
53 Ga0495631_0048049 3300046518 Bacteria 1872
54 Ga0495643_0005566 3300046522 Bacteria 8484
55 Ga0495652_0018789 3300046529 Bacteria 6160
56 Ga0495622_0008063 3300046557 Bacteria 4883
57 Ga0495667_0042138 3300046559 Bacteria 3027
58 Ga0495634_0044232 3300046642 Bacteria 3015
59 Ga0495588_0003277 3300046674 Bacteria 7030
60 Ga0495657_0015347 3300046675 Bacteria 5609
61 Ga0495657_0021664 3300046675 Bacteria 4609
62 Ga0495613_0025413 3300046689 Bacteria 4412
63 Ga0495613_0152465 3300046689 Bacteria 1647
64 Ga0495649_0010647 3300046694 Bacteria 5417
65 Ga0495636_0001275 3300047318 Bacteria 9546
66 Ga0495676_0022141 3300047321 Bacteria 5536
67 Ga0495676_0054472 3300047321 Bacteria 3179
68 Ga0495680_0028068 3300047322 Bacteria 4617
69 Ga0495687_003443 3300047443 Bacteria 11469
70 Ga0495687_029546 3300047443 Bacteria 2535
71 Ga0495685_023224 3300047447 Bacteria 2134
72 Ga0495681_0061637 3300047470 Bacteria 1727
73 Ga0495626_0036330 3300048091 Bacteria 2347
74 Ga0501031_0067735 3300049568 Bacteria 2325
75 Ga0501032_0024949 3300049569 Bacteria 4125
76 Ga0501033_0000773 3300049570 Bacteria 29414
77 Ga0501033_0020143 3300049570 Bacteria 5042
78 Ga0501033_0101969 3300049570 Bacteria 2093
79 Ga0501033_0139206 3300049570 Bacteria 1755
80 Ga0501033_0148776 3300049570 Bacteria 1690
81 Ga0501034_0023646 3300049571 Bacteria 6258
82 Ga0501034_0127770 3300049571 Bacteria 2526
83 Ga0501034_0216414 3300049571 Bacteria 1869
84 Ga0501036_0000892 3300049572 Bacteria 22310
85 Ga0501036_0004911 3300049572 Bacteria 10799
86 Ga0501036_0035015 3300049572 Bacteria 4247
87 Ga0501036_0054164 3300049572 Bacteria 3397
88 Ga0501038_0005306 3300049574 Bacteria 11971
89 Ga0501038_0023270 3300049574 Bacteria 5541
90 Ga0501038_0289392 3300049574 Bacteria 1288
91 Ga0501039_0007602 3300049575 Bacteria 8278
92 Ga0501039_0275595 3300049575 Bacteria 1322
93 Ga0501043_0005863 3300049579 Bacteria 9882
94 Ga0501043_0019038 3300049579 Bacteria 5390
95 Ga0501043_0034679 3300049579 Bacteria 3969
96 Ga0501046_0008709 3300049580 Bacteria 8817
97 Ga0501047_0008028 3300049581 Bacteria 9956
98 Ga0501047_0008187 3300049581 Bacteria 9876
99 Ga0501047_0035007 3300049581 Bacteria 4850
100 Ga0501047_0062005 3300049581 Bacteria 3607
101 Ga0501048_0004135 3300049582 Bacteria 11059
102 Ga0501068_0039596 3300049584 Bacteria 2827
103 Ga0501070_0001375 3300049586 Bacteria 21757
104 Ga0501074_0001931 3300049590 Bacteria 14249
105 Ga0501035_0004667 3300049822 Bacteria 13006
106 Ga0501035_0008922 3300049822 Bacteria 9330
107 Ga0501035_0070350 3300049822 Bacteria 3099
108 Ga0501044_0007499 3300049823 Bacteria 11999
109 Ga0501044_0022923 3300049823 Bacteria 6648
110 Ga0501044_0023681 3300049823 Bacteria 6529
111 Ga0501044_0254374 3300049823 Bacteria 1696
112 Ga0501045_0019431 3300049824 Bacteria 4844
113 nmdc:mga06z11_1303_c1 3300050494 Bacteria 9227
114 Ga0466962_0000127 3300061719 Bacteria 31175
115 8008577027 8008574985 Bacteria 7815457
116 2515853573 2515154155 Bacteria 7985436
117 2547411516 2547132111 Bacteria 8013147
118 2554256123 2554235005 Bacteria 6457341
119 2585311260 2582581313 Bacteria 10042643
120 2616903397 2616644941 Bacteria 8510691
121 2643764129 2643221548 Bacteria 8053412
122 2643944061 2643221587 Bacteria 7586415
123 2644387025 2643221670 Bacteria 6497041
124 2644406727 2643221673 Bacteria 9196637
125 2644434798 2643221677 Bacteria 7584031
126 2644461438 2643221682 Bacteria 6743283
127 2734973777 2734482000 Bacteria 5525167
128 2784590529 2784132148 Bacteria 8627943
129 2786672797 2786546132 Bacteria 10419719
130 2812478617 2811994917 Bacteria 7761064
131 2862186554 2862178590 Bacteria 8583590
132 2862284595 2862281513 Bacteria 9621493
133 2862385786 2862382967 Bacteria 10317375
134 2862511299 2862507626 Bacteria 9425308
135 2863408777 2863404153 Bacteria 9672205
136 2867432992 2867428634 Bacteria 9590268
137 2873153929 2873151551 Bacteria 8625867
138 2875396859 2875391855 Bacteria 7600475
139 2895429858 2895427314 Bacteria 13147766
140 2912762918 2912757875 Bacteria 7940295
141 2918506646 2918501144 Bacteria 8668083
142 2946069972 2946064051 Bacteria 8957905
143 2947226797 2947224130 Bacteria 9938529
144 2954679101 2954673503 Bacteria 9685905
145 2954685052 2954682443 Bacteria 9862841
146 2954694667 2954691527 Bacteria 10720516
147 2954709871 2954701450 Bacteria 10834262
148 2954724122 2954721474 Bacteria 10456478
149 2954737717 2954731030 Bacteria 10243860
150 2954743018 2954740390 Bacteria 10229294
151 2954756552 2954749733 Bacteria 10366972
152 2954761976 2954759201 Bacteria 9358192
153 2966600747 2966598605 Bacteria 7676064
154 2990061187 2990059506 Bacteria 9321252
155 2997452996 2997451912 Bacteria 8492419
156 3006394539 3006393351 Bacteria 6615579
157 3006496728 3006493962 Bacteria 8825450
158 8025535256 8025530807 Bacteria 8495698
159 8033685622 8033684223 Bacteria 6906479
160 8047895921 8047893842 Bacteria 11723082
161 8048363013 8048356638 Bacteria 11044339
162 8048372945 8048369669 Bacteria 11666822
163 8048381879 8048379754 Bacteria 11877923
164 8048409147 8048406513 Bacteria 8936924
165 8054164863 8054160619 Bacteria 7783213
166 8056834061 8056829672 Bacteria 9045328
167 JGI24737J22298_10021267
168 rootH2_10034202
169 Ga0006562J51391_1069589
170 Ga0068853_100093660
171 Ga0081455_10041755
172 Ga0075363_100139507
173 Ga0182007_10001731
174 Ga0207426_1016444
175 Ga0307508_10000366
176 Ga0395900_0067162
177 Ga0395898_0026426
178 Ga0395898_0032279
179 Ga0439436_0001131
180 Ga0439439_0006125
181 Ga0451853_1264641
182 Ga0439448_0008229
183 Ga0439449_0008688
184 Ga0439449_0024717
185 Ga0439457_000078
186 Ga0450894_000139
187 Ga0450898_000258
188 Ga0450903_000030
189 Ga0450906_006891
190 Ga0466969_0013109
191 Ga0466969_0060119
192 Ga0466972_0002471
193 Ga0466972_0009589
194 Ga0466972_0014129
195 Ga0466965_0021933
196 Ga0466965_0046234
197 Ga0466965_0099734
198 Ga0466966_0007098
199 Ga0466961_0000283
200 Ga0466961_0005708
201 Ga0466963_0001947
202 Ga0466963_0002157
203 Ga0466964_0021715
204 Ga0466971_0001608
205 Ga0466968_0013094
206 Ga0466970_0009918
207 Ga0466957_0047679
208 Ga0466959_0000785
209 Ga0466958_0006284
210 Ga0466967_0000551
211 Ga0466967_0026951
212 Ga0495603_0000318
213 Ga0495629_0002155
214 Ga0495651_0128240
215 Ga0495662_0047150
216 Ga0495594_0002209
217 Ga0495618_0131191
218 Ga0495620_0001945
219 Ga0495631_0048049
220 Ga0495643_0005566
221 Ga0495652_0018789
222 Ga0495622_0008063
223 Ga0495667_0042138
224 Ga0495634_0044232
225 Ga0495588_0003277
226 Ga0495657_0015347
227 Ga0495657_0021664
228 Ga0495613_0025413
229 Ga0495613_0152465
230 Ga0495649_0010647
231 Ga0495636_0001275
232 Ga0495676_0022141
233 Ga0495676_0054472
234 Ga0495680_0028068
235 Ga0495687_003443
236 Ga0495687_029546
237 Ga0495685_023224
238 Ga0495681_0061637
239 Ga0495626_0036330
240 Ga0501031_0067735
241 Ga0501032_0024949
242 Ga0501033_0000773
243 Ga0501033_0020143
244 Ga0501033_0101969
245 Ga0501033_0139206
246 Ga0501033_0148776
247 Ga0501034_0023646
248 Ga0501034_0127770
249 Ga0501034_0216414
250 Ga0501036_0000892
251 Ga0501036_0004911
252 Ga0501036_0035015
253 Ga0501036_0054164
254 Ga0501038_0005306
255 Ga0501038_0023270
256 Ga0501038_0289392
257 Ga0501039_0007602
258 Ga0501039_0275595
259 Ga0501043_0005863
260 Ga0501043_0019038
261 Ga0501043_0034679
262 Ga0501046_0008709
263 Ga0501047_0008028
264 Ga0501047_0008187
265 Ga0501047_0035007
266 Ga0501047_0062005
267 Ga0501048_0004135
268 Ga0501068_0039596
269 Ga0501070_0001375
270 Ga0501074_0001931
271 Ga0501035_0004667
272 Ga0501035_0008922
273 Ga0501035_0070350
274 Ga0501044_0007499
275 Ga0501044_0022923
276 Ga0501044_0023681
277 Ga0501044_0254374
278 Ga0501045_0019431
279 nmdc:mga06z11_1303_c1
280 Ga0466962_0000127
281 8008577027
282 2515853573
283 2547411516
284 2554256123
285 2585311260
286 2616903397
287 2643764129
288 2643944061
289 2644387025
290 2644406727
291 2644434798
292 2644461438
293 2734973777
294 2784590529
295 2786672797
296 2812478617
297 2862186554
298 2862284595
299 2862385786
300 2862511299
301 2863408777
302 2867432992
303 2873153929
304 2875396859
305 2895429858
306 2912762918
307 2918506646
308 2946069972
309 2947226797
310 2954679101
311 2954685052
312 2954694667
313 2954709871
314 2954724122
315 2954737717
316 2954743018
317 2954756552
318 2954761976
319 2966600747
320 2990061187
321 2997452996
322 3006394539
323 3006496728
324 8025535256
325 8033685622
326 8047895921
327 8048363013
328 8048372945
329 8048381879
330 8048409147
331 8054164863
332 8056834061

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07995

GSDH

Glucose / Sorbosone dehydrogenase

97

399

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3das-assembly1.cif.gz_A structure of the pqq-bound form of aldose sugar dehydrogenase (adh) from streptomyces coelicolor 0.994 4 333
3das-assembly1.cif.gz_A structure of the pqq-bound form of aldose sugar dehydrogenase (adh) from streptomyces coelicolor 0.9821 4 333
3a9h-assembly1.cif.gz_A crystal structure of pqq-dependent sugar dehydrogenase holo-form 0.9185 5 331
3a9h-assembly1.cif.gz_A crystal structure of pqq-dependent sugar dehydrogenase holo-form 0.8997 5 331
2ism-assembly1.cif.gz_A crystal structure of the putative oxidoreductase (glucose dehydrogenase) (ttha0570) from thermus theromophilus hb8 0.8958 5 330
ID Description Score Start End Superfamily
3dasA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9895 4 333 2.120.10.30
3dasA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9776 4 333 2.120.10.30
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.9176 5 331 2.120.10.30
3a9gA00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.899 5 331 2.120.10.30
2ismB00 Mainly Beta;6 Propeller;Neuraminidase;TolB, C-terminal domain 0.8934 5 330 2.120.10.30
ID Description Score Start End GO Terms
AF-A0A4R3IKG9-F1-model_v4 deleted 0.9975 9 333
AF-A0A1S9NIT6-F1-model_v4 deleted 0.9972 3 333
AF-A0A5P1YSN3-F1-model_v4 deleted 0.997 4 333
AF-A0A6I1ZG10-F1-model_v4 Glucose/Sorbosone dehydrogenase domain-containing protein 0.997 4 333
AF-A0A4Q7WSZ2-F1-model_v4 Glucose/arabinose dehydrogenase 0.9969 4 333

Map