F249244
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 166 | 109 | 332 | 429 |
Family's Representative Sequence
| Representative Sequence | 3300049571|Ga0501034_0002826|Ga0501034_0002826_5652_6965 |
| Length | 437 |
| Sequence | MGAELSWSNWSGLERATPARAVAPRDAEEVVAAVLAARRAGTTIKAAGTGHSFTAIASPGQGTHLLPGNLTGIAAVDHEALTVTAYAGTQLKELNVTLERLGLSLHNMGDIAEQTLAGAVSTGTHGTGGVAAGLAAQLAGFTLVTGTGEVLTCSAEENADVFDLARVGLGALGVLVTLTFRVEPLFALEADEQPMSWAQFHECFDDLTASAHHVDAYWFPHTDRLLTKRNSRLASLEEARPLPRLKAWFDDDFLQNTAFGALTAGANLAPGVIPRMNRMNASLLSARTYSDVAHRVFTTERRVVFREMEYAVPRAVGLEVLRECRRALDASDLRISFPVEIRVAPADDVPLSTGYGRDSLYLAFHTHRAAEHRAYFALMEPILRAADGRPHWGKVHTRSAADLAPAYERFTDFLALRDRLDPGRVFGNDYLRRVLGP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 5 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 9 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 12 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 13 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 14 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 15 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 16 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 17 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 18 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 19 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 20 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 21 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 23 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 27 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 44 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 45 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 46 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 47 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 48 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 49 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 50 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 51 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 52 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 53 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 54 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 55 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 56 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 57 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 58 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 59 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 60 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 61 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 62 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 63 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 64 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 65 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 66 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 67 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 68 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 69 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 70 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 71 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 72 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 73 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 74 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 75 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 76 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 77 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 78 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 79 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 80 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 81 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 82 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 83 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 84 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 85 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 86 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 87 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 88 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 89 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 90 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 91 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 92 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 93 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 94 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 95 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 96 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 97 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 98 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 99 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 100 | 2643221561 | Nocardioides sp. Root151 | Isolate | Unclassified |
| 101 | 2643221604 | Nocardioides sp. Root190 | Isolate | Unclassified |
| 102 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 103 | 2643221620 | Nocardioides sp. Root240 | Isolate | Unclassified |
| 104 | 2643221641 | Nocardioides sp. Root122 | Isolate | Unclassified |
| 105 | 2643221696 | Nocardioides sp. Root140 | Isolate | Unclassified |
| 106 | 2738541305 | Nocardioides sp. CF167 | Isolate | Unclassified |
| 107 | 2739367898 | Nocardioides sp. CF479 | Isolate | Unclassified |
| 108 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 109 | 8054609563 | Nocardioides astragali CGMCC 4.7327 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 93.98 |
| Metatranscriptomes | 0 |
| Isolates | 6.02 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.04 |
| Nodule | 0.6 |
| Rhizoplane | 14.46 |
| Rhizosphere | 70.48 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0501034_0002826 | 3300049571 | Bacteria | 20262 |
| 2 | Ga0070658_10008648 | 3300005327 | Bacteria | 8180 |
| 3 | Ga0070658_10020383 | 3300005327 | Bacteria | 5313 |
| 4 | Ga0070683_100025495 | 3300005329 | Bacteria | 5310 |
| 5 | Ga0070683_100034146 | 3300005329 | Bacteria | 4645 |
| 6 | Ga0070692_10033221 | 3300005345 | Bacteria | 2599 |
| 7 | Ga0070668_100238689 | 3300005347 | Bacteria | 1505 |
| 8 | Ga0070659_100004134 | 3300005366 | Bacteria | 10348 |
| 9 | Ga0070700_100033490 | 3300005441 | Bacteria | 3095 |
| 10 | Ga0070679_100002305 | 3300005530 | Bacteria | 17265 |
| 11 | Ga0070679_100278157 | 3300005530 | Bacteria | 1627 |
| 12 | Ga0070684_100001548 | 3300005535 | Bacteria | 16592 |
| 13 | Ga0070684_100249638 | 3300005535 | Bacteria | 1622 |
| 14 | Ga0070665_100000273 | 3300005548 | Bacteria | 84592 |
| 15 | Ga0068857_100208721 | 3300005577 | Bacteria | 1782 |
| 16 | Ga0068858_100016829 | 3300005842 | Bacteria | 6866 |
| 17 | Ga0068860_100000560 | 3300005843 | Bacteria | 45058 |
| 18 | Ga0075365_10001405 | 3300006038 | Bacteria | 10867 |
| 19 | Ga0075365_10006441 | 3300006038 | Bacteria | 6461 |
| 20 | Ga0075365_10019331 | 3300006038 | Bacteria | 4203 |
| 21 | Ga0075368_10026062 | 3300006042 | Bacteria | 2247 |
| 22 | Ga0075364_10014420 | 3300006051 | Bacteria | 4883 |
| 23 | Ga0075367_10009742 | 3300006178 | Bacteria | 5031 |
| 24 | Ga0075370_10031530 | 3300006353 | Bacteria | 2959 |
| 25 | Ga0068865_100056255 | 3300006881 | Bacteria | 2740 |
| 26 | Ga0111539_10221511 | 3300009094 | Bacteria | 2203 |
| 27 | Ga0105245_10004822 | 3300009098 | Bacteria | 11892 |
| 28 | Ga0105242_10161459 | 3300009176 | Bacteria | 1962 |
| 29 | Ga0105249_10066751 | 3300009553 | Bacteria | 3313 |
| 30 | Ga0105249_10069626 | 3300009553 | Bacteria | 3247 |
| 31 | Ga0105239_10052104 | 3300010375 | Bacteria | 4487 |
| 32 | Ga0105246_10014045 | 3300011119 | Bacteria | 5030 |
| 33 | Ga0157369_10025864 | 3300013105 | Bacteria | 6512 |
| 34 | Ga0163162_10002722 | 3300013306 | Bacteria | 16762 |
| 35 | Ga0157372_10002563 | 3300013307 | Bacteria | 19710 |
| 36 | Ga0157379_10039881 | 3300014968 | Bacteria | 4190 |
| 37 | Ga0207705_10016122 | 3300025909 | Bacteria | 5362 |
| 38 | Ga0207657_10065810 | 3300025919 | Bacteria | 3088 |
| 39 | Ga0207657_10097793 | 3300025919 | Bacteria | 2440 |
| 40 | Ga0207652_10004199 | 3300025921 | Bacteria | 11756 |
| 41 | Ga0207687_10057772 | 3300025927 | Bacteria | 2727 |
| 42 | Ga0207704_10026568 | 3300025938 | Bacteria | 3178 |
| 43 | Ga0207661_10057913 | 3300025944 | Bacteria | 3117 |
| 44 | Ga0207667_10180043 | 3300025949 | Bacteria | 2171 |
| 45 | Ga0207702_10063708 | 3300026078 | Bacteria | 3153 |
| 46 | Ga0207676_10016336 | 3300026095 | Bacteria | 5375 |
| 47 | Ga0207674_10201546 | 3300026116 | Bacteria | 1939 |
| 48 | Ga0207675_100051939 | 3300026118 | Bacteria | 3825 |
| 49 | Ga0207675_100244901 | 3300026118 | Bacteria | 1733 |
| 50 | Ga0268266_10000955 | 3300028379 | Bacteria | 36877 |
| 51 | Ga0268264_10002555 | 3300028381 | Bacteria | 15966 |
| 52 | Ga0307416_100020089 | 3300032002 | Bacteria | 4757 |
| 53 | Ga0307411_10040480 | 3300032005 | Bacteria | 2957 |
| 54 | Ga0395905_0010444 | 3300037471 | Bacteria | 9033 |
| 55 | Ga0395905_0091272 | 3300037471 | Bacteria | 2856 |
| 56 | Ga0466972_0030283 | 3300044658 | Bacteria | 2664 |
| 57 | Ga0466965_0003547 | 3300044683 | Bacteria | 6855 |
| 58 | Ga0466961_0067743 | 3300044693 | Bacteria | 2267 |
| 59 | Ga0466963_0030459 | 3300044694 | Bacteria | 3482 |
| 60 | Ga0466963_0038574 | 3300044694 | Bacteria | 3125 |
| 61 | Ga0466963_0057554 | 3300044694 | Bacteria | 2589 |
| 62 | Ga0466963_0099517 | 3300044694 | Bacteria | 1989 |
| 63 | Ga0466964_0004745 | 3300044706 | Bacteria | 5022 |
| 64 | Ga0466970_0006108 | 3300044765 | Bacteria | 6003 |
| 65 | Ga0466970_0014969 | 3300044765 | Bacteria | 3989 |
| 66 | Ga0466957_0082281 | 3300044842 | Bacteria | 2007 |
| 67 | Ga0466957_0092378 | 3300044842 | Bacteria | 1898 |
| 68 | Ga0466960_0018950 | 3300044901 | Bacteria | 3024 |
| 69 | Ga0466960_0022330 | 3300044901 | Bacteria | 2828 |
| 70 | Ga0466967_0011733 | 3300045976 | Bacteria | 6660 |
| 71 | Ga0466967_0023205 | 3300045976 | Bacteria | 5080 |
| 72 | Ga0466967_0043076 | 3300045976 | Bacteria | 3907 |
| 73 | Ga0466967_0047627 | 3300045976 | Bacteria | 3737 |
| 74 | Ga0466967_0064117 | 3300045976 | Bacteria | 3267 |
| 75 | Ga0466967_0300826 | 3300045976 | Bacteria | 1543 |
| 76 | Ga0495603_0079954 | 3300046455 | Bacteria | 1916 |
| 77 | Ga0496100_0013996 | 3300048903 | Bacteria | 4646 |
| 78 | Ga0496101_0026498 | 3300048904 | Bacteria | 4031 |
| 79 | Ga0496102_0009592 | 3300048905 | Bacteria | 8325 |
| 80 | Ga0496102_0046324 | 3300048905 | Bacteria | 3949 |
| 81 | Ga0496102_0238126 | 3300048905 | Bacteria | 1716 |
| 82 | Ga0496103_0006138 | 3300048906 | Bacteria | 7180 |
| 83 | Ga0496104_0004379 | 3300048907 | Bacteria | 12297 |
| 84 | Ga0496104_0130579 | 3300048907 | Bacteria | 2413 |
| 85 | Ga0496105_0002817 | 3300048908 | Bacteria | 12708 |
| 86 | Ga0496107_0015041 | 3300048910 | Bacteria | 5421 |
| 87 | Ga0496107_0129380 | 3300048910 | Bacteria | 1863 |
| 88 | Ga0496108_0020281 | 3300048911 | Bacteria | 5463 |
| 89 | Ga0496108_0024769 | 3300048911 | Bacteria | 4942 |
| 90 | Ga0496108_0171148 | 3300048911 | Bacteria | 1879 |
| 91 | Ga0496109_0048405 | 3300048912 | Bacteria | 3868 |
| 92 | Ga0496109_0054417 | 3300048912 | Bacteria | 3651 |
| 93 | Ga0496111_0000864 | 3300048914 | Bacteria | 16432 |
| 94 | Ga0496111_0009122 | 3300048914 | Bacteria | 6603 |
| 95 | Ga0496114_0003096 | 3300048917 | Bacteria | 12748 |
| 96 | Ga0496114_0003311 | 3300048917 | Bacteria | 12377 |
| 97 | Ga0496114_0039099 | 3300048917 | Bacteria | 3926 |
| 98 | Ga0496114_0058658 | 3300048917 | Bacteria | 3214 |
| 99 | Ga0496115_0009620 | 3300048918 | Bacteria | 7190 |
| 100 | Ga0496115_0044404 | 3300048918 | Bacteria | 3544 |
| 101 | Ga0501032_0009701 | 3300049569 | Bacteria | 6971 |
| 102 | Ga0501033_0046655 | 3300049570 | Bacteria | 3221 |
| 103 | Ga0501033_0070643 | 3300049570 | Bacteria | 2565 |
| 104 | Ga0501034_0026511 | 3300049571 | Bacteria | 5902 |
| 105 | Ga0501036_0015151 | 3300049572 | Bacteria | 6438 |
| 106 | Ga0501037_0003534 | 3300049573 | Bacteria | 11347 |
| 107 | Ga0501038_0001739 | 3300049574 | Bacteria | 20245 |
| 108 | Ga0501040_0052280 | 3300049576 | Bacteria | 2796 |
| 109 | Ga0501042_0025097 | 3300049578 | Bacteria | 4185 |
| 110 | Ga0501042_0029920 | 3300049578 | Bacteria | 3843 |
| 111 | Ga0501046_0003135 | 3300049580 | Bacteria | 15269 |
| 112 | Ga0501046_0011012 | 3300049580 | Bacteria | 7750 |
| 113 | Ga0501047_0007612 | 3300049581 | Bacteria | 10193 |
| 114 | Ga0501048_0000591 | 3300049582 | Bacteria | 25746 |
| 115 | Ga0501048_0015817 | 3300049582 | Bacteria | 5566 |
| 116 | Ga0501048_0052394 | 3300049582 | Bacteria | 2904 |
| 117 | Ga0501067_0000467 | 3300049583 | Bacteria | 22014 |
| 118 | Ga0501067_0000635 | 3300049583 | Bacteria | 18888 |
| 119 | Ga0501068_0012268 | 3300049584 | Bacteria | 4849 |
| 120 | Ga0501068_0054279 | 3300049584 | Bacteria | 2427 |
| 121 | Ga0501069_0050520 | 3300049585 | Bacteria | 2312 |
| 122 | Ga0501070_0003620 | 3300049586 | Bacteria | 13337 |
| 123 | Ga0501070_0005475 | 3300049586 | Bacteria | 10833 |
| 124 | Ga0501070_0019178 | 3300049586 | Bacteria | 5737 |
| 125 | Ga0501072_0013374 | 3300049588 | Bacteria | 6281 |
| 126 | Ga0501072_0128003 | 3300049588 | Bacteria | 2023 |
| 127 | Ga0501073_0062060 | 3300049589 | Bacteria | 2607 |
| 128 | Ga0501073_0074708 | 3300049589 | Bacteria | 2360 |
| 129 | Ga0501074_0009782 | 3300049590 | Bacteria | 6963 |
| 130 | Ga0501074_0010955 | 3300049590 | Bacteria | 6582 |
| 131 | Ga0501074_0028237 | 3300049590 | Bacteria | 4065 |
| 132 | Ga0501076_0191205 | 3300049592 | Bacteria | 1670 |
| 133 | Ga0501077_0019381 | 3300049593 | Bacteria | 4303 |
| 134 | Ga0501077_0063257 | 3300049593 | Bacteria | 2347 |
| 135 | Ga0501079_0031903 | 3300049741 | Bacteria | 4049 |
| 136 | Ga0501080_0002581 | 3300049742 | Bacteria | 15861 |
| 137 | Ga0501080_0006382 | 3300049742 | Bacteria | 10579 |
| 138 | Ga0501080_0053566 | 3300049742 | Bacteria | 3757 |
| 139 | Ga0501080_0324114 | 3300049742 | Bacteria | 1394 |
| 140 | Ga0501081_0175673 | 3300049743 | Bacteria | 1548 |
| 141 | Ga0501083_0035517 | 3300049744 | Bacteria | 3404 |
| 142 | Ga0501035_0001864 | 3300049822 | Bacteria | 21244 |
| 143 | Ga0501035_0054827 | 3300049822 | Bacteria | 3560 |
| 144 | Ga0501044_0009393 | 3300049823 | Bacteria | 10654 |
| 145 | nmdc:mga03n38_40577_c1 | 3300050490 | Bacteria | 2023 |
| 146 | nmdc:mga00v17_112718_c1 | 3300050491 | Bacteria | 1726 |
| 147 | nmdc:mga00v17_179568_c1 | 3300050491 | Bacteria | 1366 |
| 148 | nmdc:mga0yw44_104682_c1 | 3300050492 | Bacteria | 1807 |
| 149 | nmdc:mga0yw44_106541_c1 | 3300050492 | Bacteria | 1792 |
| 150 | nmdc:mga0yw44_12895_c1 | 3300050492 | Bacteria | 4377 |
| 151 | nmdc:mga0yw44_3541_c1 | 3300050492 | Bacteria | 6957 |
| 152 | nmdc:mga08y16_397386_c1 | 3300050511 | Bacteria | 1411 |
| 153 | Ga0500573_0012512 | 3300053140 | Bacteria | 4765 |
| 154 | Ga0501084_0015744 | 3300054114 | Bacteria | 6271 |
| 155 | Ga0501082_0005436 | 3300060353 | Bacteria | 11058 |
| 156 | Ga0501082_0126488 | 3300060353 | Bacteria | 2216 |
| 157 | 2643825694 | 2643221561 | Bacteria | 4984412 |
| 158 | 2644034444 | 2643221604 | Bacteria | 5014917 |
| 159 | 2644098506 | 2643221617 | Bacteria | 5139111 |
| 160 | 2644114636 | 2643221620 | Bacteria | 5134593 |
| 161 | 2644230291 | 2643221641 | Bacteria | 4490190 |
| 162 | 2644531686 | 2643221696 | Bacteria | 5431823 |
| 163 | 2738869777 | 2738541305 | Bacteria | 4910150 |
| 164 | 2740169039 | 2739367898 | Bacteria | 4367674 |
| 165 | 2857484293 | 2857481737 | Bacteria | 4761446 |
| 166 | 8054611133 | 8054609563 | Bacteria | 5170090 |
| 167 | Ga0501034_0002826 | |||
| 168 | Ga0070658_10008648 | |||
| 169 | Ga0070658_10020383 | |||
| 170 | Ga0070683_100025495 | |||
| 171 | Ga0070683_100034146 | |||
| 172 | Ga0070692_10033221 | |||
| 173 | Ga0070668_100238689 | |||
| 174 | Ga0070659_100004134 | |||
| 175 | Ga0070700_100033490 | |||
| 176 | Ga0070679_100002305 | |||
| 177 | Ga0070679_100278157 | |||
| 178 | Ga0070684_100001548 | |||
| 179 | Ga0070684_100249638 | |||
| 180 | Ga0070665_100000273 | |||
| 181 | Ga0068857_100208721 | |||
| 182 | Ga0068858_100016829 | |||
| 183 | Ga0068860_100000560 | |||
| 184 | Ga0075365_10001405 | |||
| 185 | Ga0075365_10006441 | |||
| 186 | Ga0075365_10019331 | |||
| 187 | Ga0075368_10026062 | |||
| 188 | Ga0075364_10014420 | |||
| 189 | Ga0075367_10009742 | |||
| 190 | Ga0075370_10031530 | |||
| 191 | Ga0068865_100056255 | |||
| 192 | Ga0111539_10221511 | |||
| 193 | Ga0105245_10004822 | |||
| 194 | Ga0105242_10161459 | |||
| 195 | Ga0105249_10066751 | |||
| 196 | Ga0105249_10069626 | |||
| 197 | Ga0105239_10052104 | |||
| 198 | Ga0105246_10014045 | |||
| 199 | Ga0157369_10025864 | |||
| 200 | Ga0163162_10002722 | |||
| 201 | Ga0157372_10002563 | |||
| 202 | Ga0157379_10039881 | |||
| 203 | Ga0207705_10016122 | |||
| 204 | Ga0207657_10065810 | |||
| 205 | Ga0207657_10097793 | |||
| 206 | Ga0207652_10004199 | |||
| 207 | Ga0207687_10057772 | |||
| 208 | Ga0207704_10026568 | |||
| 209 | Ga0207661_10057913 | |||
| 210 | Ga0207667_10180043 | |||
| 211 | Ga0207702_10063708 | |||
| 212 | Ga0207676_10016336 | |||
| 213 | Ga0207674_10201546 | |||
| 214 | Ga0207675_100051939 | |||
| 215 | Ga0207675_100244901 | |||
| 216 | Ga0268266_10000955 | |||
| 217 | Ga0268264_10002555 | |||
| 218 | Ga0307416_100020089 | |||
| 219 | Ga0307411_10040480 | |||
| 220 | Ga0395905_0010444 | |||
| 221 | Ga0395905_0091272 | |||
| 222 | Ga0466972_0030283 | |||
| 223 | Ga0466965_0003547 | |||
| 224 | Ga0466961_0067743 | |||
| 225 | Ga0466963_0030459 | |||
| 226 | Ga0466963_0038574 | |||
| 227 | Ga0466963_0057554 | |||
| 228 | Ga0466963_0099517 | |||
| 229 | Ga0466964_0004745 | |||
| 230 | Ga0466970_0006108 | |||
| 231 | Ga0466970_0014969 | |||
| 232 | Ga0466957_0082281 | |||
| 233 | Ga0466957_0092378 | |||
| 234 | Ga0466960_0018950 | |||
| 235 | Ga0466960_0022330 | |||
| 236 | Ga0466967_0011733 | |||
| 237 | Ga0466967_0023205 | |||
| 238 | Ga0466967_0043076 | |||
| 239 | Ga0466967_0047627 | |||
| 240 | Ga0466967_0064117 | |||
| 241 | Ga0466967_0300826 | |||
| 242 | Ga0495603_0079954 | |||
| 243 | Ga0496100_0013996 | |||
| 244 | Ga0496101_0026498 | |||
| 245 | Ga0496102_0009592 | |||
| 246 | Ga0496102_0046324 | |||
| 247 | Ga0496102_0238126 | |||
| 248 | Ga0496103_0006138 | |||
| 249 | Ga0496104_0004379 | |||
| 250 | Ga0496104_0130579 | |||
| 251 | Ga0496105_0002817 | |||
| 252 | Ga0496107_0015041 | |||
| 253 | Ga0496107_0129380 | |||
| 254 | Ga0496108_0020281 | |||
| 255 | Ga0496108_0024769 | |||
| 256 | Ga0496108_0171148 | |||
| 257 | Ga0496109_0048405 | |||
| 258 | Ga0496109_0054417 | |||
| 259 | Ga0496111_0000864 | |||
| 260 | Ga0496111_0009122 | |||
| 261 | Ga0496114_0003096 | |||
| 262 | Ga0496114_0003311 | |||
| 263 | Ga0496114_0039099 | |||
| 264 | Ga0496114_0058658 | |||
| 265 | Ga0496115_0009620 | |||
| 266 | Ga0496115_0044404 | |||
| 267 | Ga0501032_0009701 | |||
| 268 | Ga0501033_0046655 | |||
| 269 | Ga0501033_0070643 | |||
| 270 | Ga0501034_0026511 | |||
| 271 | Ga0501036_0015151 | |||
| 272 | Ga0501037_0003534 | |||
| 273 | Ga0501038_0001739 | |||
| 274 | Ga0501040_0052280 | |||
| 275 | Ga0501042_0025097 | |||
| 276 | Ga0501042_0029920 | |||
| 277 | Ga0501046_0003135 | |||
| 278 | Ga0501046_0011012 | |||
| 279 | Ga0501047_0007612 | |||
| 280 | Ga0501048_0000591 | |||
| 281 | Ga0501048_0015817 | |||
| 282 | Ga0501048_0052394 | |||
| 283 | Ga0501067_0000467 | |||
| 284 | Ga0501067_0000635 | |||
| 285 | Ga0501068_0012268 | |||
| 286 | Ga0501068_0054279 | |||
| 287 | Ga0501069_0050520 | |||
| 288 | Ga0501070_0003620 | |||
| 289 | Ga0501070_0005475 | |||
| 290 | Ga0501070_0019178 | |||
| 291 | Ga0501072_0013374 | |||
| 292 | Ga0501072_0128003 | |||
| 293 | Ga0501073_0062060 | |||
| 294 | Ga0501073_0074708 | |||
| 295 | Ga0501074_0009782 | |||
| 296 | Ga0501074_0010955 | |||
| 297 | Ga0501074_0028237 | |||
| 298 | Ga0501076_0191205 | |||
| 299 | Ga0501077_0019381 | |||
| 300 | Ga0501077_0063257 | |||
| 301 | Ga0501079_0031903 | |||
| 302 | Ga0501080_0002581 | |||
| 303 | Ga0501080_0006382 | |||
| 304 | Ga0501080_0053566 | |||
| 305 | Ga0501080_0324114 | |||
| 306 | Ga0501081_0175673 | |||
| 307 | Ga0501083_0035517 | |||
| 308 | Ga0501035_0001864 | |||
| 309 | Ga0501035_0054827 | |||
| 310 | Ga0501044_0009393 | |||
| 311 | nmdc:mga03n38_40577_c1 | |||
| 312 | nmdc:mga00v17_112718_c1 | |||
| 313 | nmdc:mga00v17_179568_c1 | |||
| 314 | nmdc:mga0yw44_104682_c1 | |||
| 315 | nmdc:mga0yw44_106541_c1 | |||
| 316 | nmdc:mga0yw44_12895_c1 | |||
| 317 | nmdc:mga0yw44_3541_c1 | |||
| 318 | nmdc:mga08y16_397386_c1 | |||
| 319 | Ga0500573_0012512 | |||
| 320 | Ga0501084_0015744 | |||
| 321 | Ga0501082_0005436 | |||
| 322 | Ga0501082_0126488 | |||
| 323 | 2643825694 | |||
| 324 | 2644034444 | |||
| 325 | 2644098506 | |||
| 326 | 2644114636 | |||
| 327 | 2644230291 | |||
| 328 | 2644531686 | |||
| 329 | 2738869777 | |||
| 330 | 2740169039 | |||
| 331 | 2857484293 | |||
| 332 | 8054611133 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7sml-assembly1.cif.gz_A | crystal structure of l-galactono-1,4-lactone dehydrogenase de myrciaria dubia | 0.8509 | 15 | 436 |
| 2vfs-assembly1.cif.gz_A | alditol oxidase from streptomyces coelicolor a3(2): complex with xylitol | 0.847 | 3 | 436 |
| 1i19-assembly1.cif.gz_A | crystal structure of cholesterol oxidase from b.sterolicum | 0.8447 | 2 | 434 |
| 2vfs-assembly1.cif.gz_A | alditol oxidase from streptomyces coelicolor a3(2): complex with xylitol | 0.8431 | 3 | 436 |
| 1i19-assembly1.cif.gz_A | crystal structure of cholesterol oxidase from b.sterolicum | 0.8375 | 2 | 434 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WIT3_297_388_3.30.70.2520 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.9704 | 303 | 396 | 3.30.70.2520 |
| af_P58710_75_198_3.30.465.10 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.9601 | 68 | 181 | 3.30.465.10 |
| af_P9WIT3_297_388_3.30.70.2520 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.95 | 303 | 396 | 3.30.70.2520 |
| af_Q9HDX8_82_207_3.30.465.10 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.9461 | 68 | 181 | 3.30.465.10 |
| af_Q2RAP0_154_280_3.30.465.10 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.9447 | 68 | 179 | 3.30.465.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A543CRV4-F1-model_v4 | FAD-linked oxidoreductase | 0.9854 | 3 | 436 |
GO:0003885
GO:0016020 GO:0019853 GO:0071949 GO:0080049 |
| AF-A0A5J5KA71-F1-model_v4 | FAD-binding protein | 0.9808 | 1 | 436 |
GO:0003885
GO:0016020 GO:0019853 GO:0071949 GO:0080049 |
| AF-A0A543CRV4-F1-model_v4 | FAD-linked oxidoreductase | 0.9808 | 3 | 436 |
GO:0003885
GO:0016020 GO:0019853 GO:0071949 GO:0080049 |
| AF-A0A4R4N655-F1-model_v4 | FAD-binding protein | 0.9785 | 1 | 435 |
GO:0003885
GO:0016020 GO:0019853 GO:0071949 GO:0080049 |
| AF-A0A7K1TQU5-F1-model_v4 | FAD-binding protein | 0.9784 | 2 | 436 |
GO:0003885
GO:0016020 GO:0071949 GO:0080049 |