F248114

General Info

Members Datasets Scaffolds Average Seq Length
166 107 167 402

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10020717|Ga0075364_100207174
Length 428
Sequence VTVSGILDIMQEMSRYGVGIDVGTTVVRCVVGHVDGSSMTPNIVGVGVAPNSGMRKGMVVNITNVAQAIDKALEEAERMSGHQIHGAAININGAHISAMTSRGVIAVGAQGHEITEDDLMRAEEAATVVQLPANREILQVTPRSYQLDGQENIKDPLGMSGIRLEVDAHVITALTPHVKNLLKAAEMTETAPHAVVVSGLAAARAVLSPQQMENGVAIIDMGGTTTSVAVYEEGDLQHLAVLPIGSVNITNDLAIGLRTDLDVAEKIKLSHASATAQSGKEKPKEIELTHNSEKLAFKVKEVDMIVEARLEEIMELVDKELKQIDRSGKLPGGVVLVGGGANLKNIADFAKESLRLPARVAKFTEMSGVSDKTSKPEFAAALGLMLLDFEKEHRTPGSTPGKKSGGPAMPNIGGFVERANSLFKKFKA

Samples

Sample ID Description Type Environment
1 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
31 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
69 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
80 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
81 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
82 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
83 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
84 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
85 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
86 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
87 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
88 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
89 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
90 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
91 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
92 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
93 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
94 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
95 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
96 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
97 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
98 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
99 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
100 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
101 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
102 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
103 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
104 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300053722 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 endosphere Metagenome Endosphere
107 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 38.55
Nodule 0
Rhizoplane 0
Rhizosphere 58.43
Stem 0
Stem Tuber 0
Unclassified 3.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1001597 3300001915 Bacteria 6363
2 JGI24740J21852_10009534 3300001979 Unclassified 3795
3 JGI24737J22298_10000055 3300001990 Bacteria 33719
4 JGI24735J21928_10000047 3300002067 Bacteria 51438
5 rootH2_10000244 3300003320 Bacteria 697651
6 rootH2_10162212 3300003320 Bacteria 4900
7 rootH1_10070884 3300003316 Bacteria 1406
8 rootH1_10070884 3300003323 Bacteria 9256
9 Ga0070658_10000667 3300005327 Bacteria 29718
10 Ga0070682_100001279 3300005337 Bacteria 14266
11 Ga0070660_100000185 3300005339 Bacteria 41480
12 Ga0070691_10000191 3300005341 Bacteria 20497
13 Ga0070668_100067463 3300005347 Unclassified 2779
14 Ga0070671_100025012 3300005355 Bacteria 4894
15 Ga0070659_100000829 3300005366 Bacteria 22537
16 Ga0070714_100000272 3300005435 Bacteria 39469
17 Ga0070681_10123214 3300005458 Unclassified 2525
18 Ga0070679_100003736 3300005530 Bacteria 13958
19 Ga0070679_100005934 3300005530 Bacteria 11353
20 Ga0068855_100001067 3300005563 Bacteria 34001
21 Ga0068855_100001640 3300005563 Bacteria 28036
22 Ga0068855_100029914 3300005563 Bacteria 6513
23 Ga0068855_100120570 3300005563 Bacteria 3002
24 Ga0070664_100026875 3300005564 Bacteria 4780
25 Ga0068857_100000040 3300005577 Bacteria 70513
26 Ga0068857_100070708 3300005577 Bacteria 3109
27 Ga0068859_100074143 3300005617 Bacteria 3442
28 Ga0068863_100043186 3300005841 Bacteria 4280
29 Ga0068858_100012467 3300005842 Bacteria 8017
30 Ga0068860_100089291 3300005843 Unclassified 2934
31 Ga0075365_10000003 3300006038 Bacteria 203750
32 Ga0075365_10000066 3300006038 Bacteria 31412
33 Ga0075365_10000151 3300006038 Bacteria 22036
34 Ga0075365_10017580 3300006038 Bacteria 4378
35 Ga0075365_10034865 3300006038 Unclassified 3253
36 Ga0075368_10000093 3300006042 Bacteria 22692
37 Ga0075363_100001098 3300006048 Bacteria 9818
38 Ga0075364_10000496 3300006051 Bacteria 19996
39 Ga0075364_10000735 3300006051 Bacteria 17176
40 Ga0075364_10001999 3300006051 Bacteria 11359
41 Ga0075364_10006154 3300006051 Archaea 7028
42 Ga0075364_10020717 3300006051 Bacteria 4138
43 Ga0075364_10079422 3300006051 Bacteria 2168
44 Ga0075362_10000051 3300006177 Bacteria 38655
45 Ga0075362_10008383 3300006177 Archaea 3950
46 Ga0075367_10000043 3300006178 Bacteria 28376
47 Ga0075367_10000113 3300006178 Bacteria 23085
48 Ga0075369_10000021 3300006186 Bacteria 44895
49 Ga0075366_10000659 3300006195 Bacteria 16251
50 Ga0075366_10002330 3300006195 Bacteria 9713
51 Ga0075366_10071621 3300006195 Bacteria 2065
52 Ga0097621_100000001 3300006237 Bacteria 632268
53 Ga0097621_100000213 3300006237 Bacteria 38241
54 Ga0075370_10026814 3300006353 Unclassified 3193
55 Ga0068871_100001821 3300006358 Bacteria 14385
56 Ga0097620_100074145 3300006931 Bacteria 3442
57 Ga0105240_10000118 3300009093 Bacteria 163934
58 Ga0105240_10264881 3300009093 Bacteria 1981
59 Ga0105245_10000002 3300009098 Bacteria 634374
60 Ga0105245_10007677 3300009098 Bacteria 9448
61 Ga0105243_10002202 3300009148 Bacteria 16432
62 Ga0105241_10000007 3300009174 Bacteria 343524
63 Ga0105241_10000917 3300009174 Bacteria 22309
64 Ga0105241_10131453 3300009174 Bacteria 2027
65 Ga0105237_10075639 3300009545 Bacteria 3358
66 Ga0105237_10233628 3300009545 Unclassified 1840
67 Ga0105238_10001558 3300009551 Bacteria 23005
68 Ga0105238_10079151 3300009551 Bacteria 3276
69 Ga0105238_10294373 3300009551 Bacteria 1606
70 Ga0105033_100457 3300009986 Bacteria 3162
71 Ga0105239_10089670 3300010375 Bacteria 3391
72 Ga0157371_10001301 3300013102 Bacteria 26246
73 Ga0157371_10005131 3300013102 Bacteria 11167
74 Ga0157369_10002190 3300013105 Bacteria 23540
75 Ga0157369_10049894 3300013105 Unclassified 4535
76 Ga0157374_10000018 3300013296 Bacteria 286683
77 Ga0157374_10040686 3300013296 Unclassified 4282
78 Ga0157372_10017916 3300013307 Bacteria 7611
79 Ga0157372_10020217 3300013307 Bacteria 7179
80 Ga0157377_10106759 3300014745 Bacteria 1677
81 Ga0157379_10152917 3300014968 Bacteria 2081
82 Ga0207647_10002597 3300025904 Bacteria 13647
83 Ga0207705_10004027 3300025909 Bacteria 11179
84 Ga0207654_10000002 3300025911 Bacteria 1460142
85 Ga0207654_10000905 3300025911 Bacteria 16385
86 Ga0207654_10060792 3300025911 Bacteria 2208
87 Ga0207707_10100638 3300025912 Unclassified 2526
88 Ga0207695_10003048 3300025913 Bacteria 24011
89 Ga0207657_10211645 3300025919 Bacteria 1556
90 Ga0207652_10003529 3300025921 Bacteria 12903
91 Ga0207652_10008513 3300025921 Bacteria 8255
92 Ga0207694_10008200 3300025924 Bacteria 7897
93 Ga0207687_10000001 3300025927 Bacteria 1130810
94 Ga0207687_10000008 3300025927 Bacteria 497738
95 Ga0207687_10042433 3300025927 Bacteria 3129
96 Ga0207664_10000578 3300025929 Bacteria 25609
97 Ga0207644_10016264 3300025931 Bacteria 5005
98 Ga0207690_10001331 3300025932 Bacteria 15545
99 Ga0207709_10001962 3300025935 Bacteria 13437
100 Ga0207667_10000008 3300025949 Bacteria 625138
101 Ga0207667_10002335 3300025949 Bacteria 23759
102 Ga0207667_10002730 3300025949 Bacteria 21816
103 Ga0207667_10212479 3300025949 Bacteria 1983
104 Ga0207703_10001658 3300026035 Bacteria 20007
105 Ga0207641_10029458 3300026088 Bacteria 4540
106 Ga0207674_10000001 3300026116 Bacteria 616581
107 Ga0207674_10044151 3300026116 Bacteria 4592
108 Ga0207698_10015391 3300026142 Bacteria 5121
109 Ga0209813_10000002 3300027866 Bacteria 215993
110 Ga0268265_10007334 3300028380 Bacteria 7445
111 Ga0268264_10206687 3300028381 Bacteria 1800
112 Ga0265334_10010500 3300028573 Unclassified 3910
113 Ga0265322_10026746 3300028654 Unclassified 1649
114 Ga0265338_10001527 3300028800 Bacteria 37344
115 Ga0265338_10008772 3300028800 Bacteria 12221
116 Ga0265338_10028091 3300028800 Bacteria 5622
117 Ga0265327_10004612 3300031251 Bacteria 12109
118 Ga0265327_10009896 3300031251 Bacteria 6801
119 Ga0307516_10000003 3300031730 Bacteria 459377
120 Ga0395900_0003721 3300037418 Bacteria 16388
121 Ga0395900_0015392 3300037418 Bacteria 7796
122 Ga0395898_0101340 3300037466 Unclassified 2765
123 Ga0395901_0053367 3300038443 Bacteria 4200
124 Ga0495588_0000173 3300046674 Bacteria 81355
125 Ga0496118_0117312 3300048921 Bacteria 1746
126 Ga0501276_000302 3300049773 Bacteria 2900
127 nmdc:mga03683_50_c1 3300050489 Bacteria 42495
128 nmdc:mga03683_6744_c1 3300050489 Archaea 3950
129 nmdc:mga03n38_681_c1 3300050490 Bacteria 6916
130 nmdc:mga00v17_13450_c1 3300050491 Bacteria 4544
131 nmdc:mga00v17_1605_c1 3300050491 Bacteria 11813
132 nmdc:mga00v17_2124_c1 3300050491 Bacteria 10186
133 nmdc:mga00v17_49558_c1 3300050491 Bacteria 2548
134 nmdc:mga00v17_585_c1 3300050491 Bacteria 20310
135 nmdc:mga00v17_793_c1 3300050491 Bacteria 17212
136 nmdc:mga0yw44_13_c1 3300050492 Bacteria 120183
137 nmdc:mga0yw44_182_c1 3300050492 Bacteria 22055
138 nmdc:mga0yw44_25_c1 3300050492 Bacteria 61711
139 nmdc:mga0yw44_5414_c1 3300050492 Bacteria 6026
140 nmdc:mga0k408_228_c1 3300050493 Bacteria 30103
141 nmdc:mga0k408_419_c2 3300050493 Bacteria 20202
142 nmdc:mga0k408_55159_c1 3300050493 Bacteria 2304
143 nmdc:mga06z11_10_c1 3300050494 Bacteria 105982
144 nmdc:mga06z11_137_c1 3300050494 Bacteria 29063
145 nmdc:mga04h51_2_c1 3300050495 Bacteria 215993
146 Ga0500610_0002552 3300053079 Bacteria 6756
147 Ga0500643_000011 3300053087 Bacteria 385630
148 Ga0500643_000849 3300053087 Bacteria 19510
149 Ga0500643_021768 3300053087 Bacteria 2074
150 Ga0500644_0012525 3300053088 Bacteria 2347
151 Ga0500583_0000146 3300053092 Bacteria 30082
152 Ga0500651_0000246 3300053093 Bacteria 33131
153 Ga0500651_0166747 3300053093 Bacteria 1315
154 Ga0500555_005066 3300053103 Bacteria 3740
155 Ga0500562_000001 3300053108 Bacteria 1178987
156 Ga0500593_000001 3300053117 Bacteria 784404
157 Ga0500614_000001 3300053123 Bacteria 1274484
158 Ga0500628_002713 3300053129 Bacteria 2913
159 Ga0500642_0001929 3300053130 Bacteria 6008
160 Ga0500655_000651 3300053133 Bacteria 6933
161 Ga0500561_0000001 3300053137 Bacteria 957685
162 Ga0500568_0004429 3300053139 Bacteria 7508
163 Ga0500577_0000299 3300053142 Bacteria 12829
164 Ga0500589_000002 3300053147 Bacteria 245055
165 Ga0500616_0000005 3300053153 Bacteria 961725
166 Ga0500649_000009 3300053722 Bacteria 94696
167 Ga0500570_000055 3300053724 Bacteria 28288

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046674 Ga0495588_0000173 Ga0495588_0000173_3137_4231 343
2 3300053123 Ga0500614_000001 Ga0500614_000001_1078591_1079685 343
3 3300053722 Ga0500649_000009 Ga0500649_000009_55970_57064 343
4 3300050489 nmdc:mga03683_50_c1 nmdc:mga03683_50_c1_37857_39017 364
5 3300050492 nmdc:mga0yw44_13_c1 nmdc:mga0yw44_13_c1_106360_107520 365
6 3300053137 Ga0500561_0000001 Ga0500561_0000001_19384_20484 366
7 3300005564 Ga0070664_100026875 Ga0070664_1000268754 368
8 3300006237 Ga0097621_100000001 Ga0097621_100000001148 368
9 3300006038 Ga0075365_10000003 Ga0075365_1000000324 374
10 3300006051 Ga0075364_10000735 Ga0075364_1000073516 374
11 3300050491 nmdc:mga00v17_793_c1 nmdc:mga00v17_793_c1_11726_12976 374
12 3300050492 nmdc:mga0yw44_25_c1 nmdc:mga0yw44_25_c1_27376_28626 374
13 3300009148 Ga0105243_10002202 Ga0105243_100022027 375
14 3300009174 Ga0105241_10131453 Ga0105241_101314532 375
15 3300013102 Ga0157371_10001301 Ga0157371_100013019 375
16 3300025911 Ga0207654_10060792 Ga0207654_100607922 375
17 3300026142 Ga0207698_10015391 Ga0207698_100153914 375
18 3300006051 Ga0075364_10001999 Ga0075364_100019998 378
19 3300050491 nmdc:mga00v17_1605_c1 nmdc:mga00v17_1605_c1_705_1955 378
20 3300005563 Ga0068855_100029914 Ga0068855_1000299144 380
21 3300025949 Ga0207667_10002730 Ga0207667_1000273018 380
22 3300005458 Ga0070681_10123214 Ga0070681_101232142 381
23 3300005530 Ga0070679_100003736 Ga0070679_1000037362 381
24 3300025912 Ga0207707_10100638 Ga0207707_101006382 381
25 3300025921 Ga0207652_10003529 Ga0207652_100035295 381
26 3300009551 Ga0105238_10079151 Ga0105238_100791512 383
27 3300053087 Ga0500643_000849 Ga0500643_000849_14257_15426 383
28 3300014745 Ga0157377_10106759 Ga0157377_101067592 384
29 3300053724 Ga0500570_000055 Ga0500570_000055_11725_12882 385
30 3300009174 Ga0105241_10000007 Ga0105241_1000000718 386
31 3300013105 Ga0157369_10002190 Ga0157369_1000219018 386
32 3300037418 Ga0395900_0015392 Ga0395900_0015392_6322_7482 386
33 3300050489 nmdc:mga03683_6744_c1 nmdc:mga03683_6744_c1_1102_2262 386
34 3300050491 nmdc:mga00v17_49558_c1 nmdc:mga00v17_49558_c1_88_1248 386
35 3300050493 nmdc:mga0k408_55159_c1 nmdc:mga0k408_55159_c1_143_1306 386
36 3300053087 Ga0500643_021768 Ga0500643_021768_882_2054 386
37 3300005563 Ga0068855_100120570 Ga0068855_1001205702 387
38 3300009093 Ga0105240_10264881 Ga0105240_102648812 387
39 3300013307 Ga0157372_10020217 Ga0157372_100202179 387
40 3300006177 Ga0075362_10000051 Ga0075362_1000005125 388
41 3300053079 Ga0500610_0002552 Ga0500610_0002552_3319_4485 388
42 3300053092 Ga0500583_0000146 Ga0500583_0000146_9710_10876 388
43 3300053093 Ga0500651_0166747 Ga0500651_0166747_53_1219 388
44 3300053130 Ga0500642_0001929 Ga0500642_0001929_4557_5723 388
45 3300053147 Ga0500589_000002 Ga0500589_000002_224637_225803 388
46 3300003320 rootH2_10162212 rootH2_101622124 389
47 3300006038 Ga0075365_10000066 Ga0075365_1000006611 389
48 3300005337 Ga0070682_100001279 Ga0070682_1000012792 390
49 3300005339 Ga0070660_100000185 Ga0070660_10000018538 390
50 3300005366 Ga0070659_100000829 Ga0070659_10000082916 390
51 3300005530 Ga0070679_100005934 Ga0070679_1000059344 390
52 3300013296 Ga0157374_10040686 Ga0157374_100406863 390
53 3300005435 Ga0070714_100000272 Ga0070714_1000002728 391
54 3300025929 Ga0207664_10000578 Ga0207664_1000057816 391
55 3300053087 Ga0500643_000011 Ga0500643_000011_368784_370028 392
56 3300053088 Ga0500644_0012525 Ga0500644_0012525_677_1942 393
57 3300005347 Ga0070668_100067463 Ga0070668_1000674632 394
58 3300005842 Ga0068858_100012467 Ga0068858_1000124679 394
59 3300026035 Ga0207703_10001658 Ga0207703_1000165815 394
60 3300025935 Ga0207709_10001962 Ga0207709_100019628 399
61 3300053117 Ga0500593_000001 Ga0500593_000001_312773_314017 399
62 3300009174 Ga0105241_10000917 Ga0105241_1000091718 400
63 3300025911 Ga0207654_10000905 Ga0207654_100009057 400
64 3300053103 Ga0500555_005066 Ga0500555_005066_690_1934 400
65 3300031251 Ga0265327_10004612 Ga0265327_100046126 401
66 3300048921 Ga0496118_0117312 Ga0496118_0117312_62_1324 402
67 3300053093 Ga0500651_0000246 Ga0500651_0000246_14746_15996 402
68 3300028800 Ga0265338_10001527 Ga0265338_100015279 403
69 3300005355 Ga0070671_100025012 Ga0070671_1000250123 404
70 3300005617 Ga0068859_100074143 Ga0068859_1000741432 404
71 3300005841 Ga0068863_100043186 Ga0068863_1000431863 404
72 3300006931 Ga0097620_100074145 Ga0097620_1000741452 404
73 3300014968 Ga0157379_10152917 Ga0157379_101529172 404
74 3300025913 Ga0207695_10003048 Ga0207695_1000304821 404
75 3300025931 Ga0207644_10016264 Ga0207644_100162647 404
76 3300026088 Ga0207641_10029458 Ga0207641_100294584 404
77 3300028380 Ga0268265_10007334 Ga0268265_100073342 404
78 3300031730 Ga0307516_10000003 Ga0307516_10000003290 406
79 3300005327 Ga0070658_10000667 Ga0070658_1000066719 407
80 3300005341 Ga0070691_10000191 Ga0070691_1000019111 407
81 3300005563 Ga0068855_100001640 Ga0068855_1000016408 407
82 3300005577 Ga0068857_100000040 Ga0068857_10000004019 407
83 3300006038 Ga0075365_10034865 Ga0075365_100348652 407
84 3300025904 Ga0207647_10002597 Ga0207647_1000259713 407
85 3300025909 Ga0207705_10004027 Ga0207705_100040276 407
86 3300025919 Ga0207657_10211645 Ga0207657_102116451 407
87 3300025921 Ga0207652_10008513 Ga0207652_100085134 407
88 3300025932 Ga0207690_10001331 Ga0207690_100013316 407
89 3300025949 Ga0207667_10002335 Ga0207667_100023358 407
90 3300026116 Ga0207674_10000001 Ga0207674_1000000119 407
91 3300050491 nmdc:mga00v17_2124_c1 nmdc:mga00v17_2124_c1_1868_3127 407
92 3300050492 nmdc:mga0yw44_5414_c1 nmdc:mga0yw44_5414_c1_231_1472 407
93 3300053139 Ga0500568_0004429 Ga0500568_0004429_2317_3558 407
94 3300006038 Ga0075365_10000151 Ga0075365_1000015118 408
95 3300006051 Ga0075364_10000496 Ga0075364_100004962 408
96 3300006051 Ga0075364_10020717 Ga0075364_100207174 408
97 3300009093 Ga0105240_10000118 Ga0105240_1000011821 408
98 3300009545 Ga0105237_10075639 Ga0105237_100756392 408
99 3300009545 Ga0105237_10233628 Ga0105237_102336281 408
100 3300009551 Ga0105238_10001558 Ga0105238_100015584 408
101 3300010375 Ga0105239_10089670 Ga0105239_100896702 408
102 3300013102 Ga0157371_10005131 Ga0157371_100051312 408
103 3300013105 Ga0157369_10049894 Ga0157369_100498943 408
104 3300013307 Ga0157372_10017916 Ga0157372_100179164 408
105 3300025924 Ga0207694_10008200 Ga0207694_100082004 408
106 3300025949 Ga0207667_10212479 Ga0207667_102124791 408
107 3300028573 Ga0265334_10010500 Ga0265334_100105002 408
108 3300028654 Ga0265322_10026746 Ga0265322_100267461 408
109 3300028800 Ga0265338_10008772 Ga0265338_100087724 408
110 3300028800 Ga0265338_10028091 Ga0265338_100280913 408
111 3300031251 Ga0265327_10009896 Ga0265327_100098961 408
112 3300037418 Ga0395900_0003721 Ga0395900_0003721_9779_11014 408
113 3300037466 Ga0395898_0101340 Ga0395898_0101340_249_1484 408
114 3300038443 Ga0395901_0053367 Ga0395901_0053367_2659_3885 408
115 3300050491 nmdc:mga00v17_585_c1 nmdc:mga00v17_585_c1_17885_19156 408
116 3300050492 nmdc:mga0yw44_182_c1 nmdc:mga0yw44_182_c1_14761_16032 408
117 3300053142 Ga0500577_0000299 Ga0500577_0000299_9639_10895 408
118 3300005577 Ga0068857_100070708 Ga0068857_1000707082 409
119 3300005843 Ga0068860_100089291 Ga0068860_1000892914 409
120 3300006042 Ga0075368_10000093 Ga0075368_100000939 409
121 3300006048 Ga0075363_100001098 Ga0075363_1000010987 409
122 3300006178 Ga0075367_10000113 Ga0075367_1000011317 409
123 3300006186 Ga0075369_10000021 Ga0075369_1000002120 409
124 3300006195 Ga0075366_10071621 Ga0075366_100716212 409
125 3300006353 Ga0075370_10026814 Ga0075370_100268142 409
126 3300009098 Ga0105245_10007677 Ga0105245_100076772 409
127 3300009551 Ga0105238_10294373 Ga0105238_102943732 409
128 3300025927 Ga0207687_10042433 Ga0207687_100424331 409
129 3300026116 Ga0207674_10044151 Ga0207674_100441514 409
130 3300027866 Ga0209813_10000002 Ga0209813_10000002164 409
131 3300028381 Ga0268264_10206687 Ga0268264_102066872 409
132 3300050490 nmdc:mga03n38_681_c1 nmdc:mga03n38_681_c1_1058_2287 409
133 3300050494 nmdc:mga06z11_10_c1 nmdc:mga06z11_10_c1_58115_59344 409
134 3300050495 nmdc:mga04h51_2_c1 nmdc:mga04h51_2_c1_58112_59341 409
135 3300053108 Ga0500562_000001 Ga0500562_000001_678568_679821 409
136 3300053133 Ga0500655_000651 Ga0500655_000651_5507_6760 409
137 3300001915 JGI24741J21665_1001597 JGI24741J21665_10015972 410
138 3300001979 JGI24740J21852_10009534 JGI24740J21852_100095342 410
139 3300001990 JGI24737J22298_10000055 JGI24737J22298_1000005519 410
140 3300002067 JGI24735J21928_10000047 JGI24735J21928_1000004726 410
141 3300003320 rootH2_10000244 rootH2_1000024417 410
142 3300003323 rootH1_10070884 rootH1_100708843 410
143 3300005563 Ga0068855_100001067 Ga0068855_10000106712 410
144 3300006038 Ga0075365_10017580 Ga0075365_100175802 410
145 3300006051 Ga0075364_10006154 Ga0075364_100061543 410
146 3300006051 Ga0075364_10079422 Ga0075364_100794222 410
147 3300006177 Ga0075362_10008383 Ga0075362_100083834 410
148 3300006178 Ga0075367_10000043 Ga0075367_1000004311 410
149 3300006195 Ga0075366_10000659 Ga0075366_100006594 410
150 3300006195 Ga0075366_10002330 Ga0075366_100023306 410
151 3300006237 Ga0097621_100000213 Ga0097621_10000021316 410
152 3300006358 Ga0068871_100001821 Ga0068871_10000182117 410
153 3300009098 Ga0105245_10000002 Ga0105245_10000002649 410
154 3300009986 Ga0105033_100457 Ga0105033_1004571 410
155 3300013296 Ga0157374_10000018 Ga0157374_1000001817 410
156 3300025911 Ga0207654_10000002 Ga0207654_100000021529 410
157 3300025927 Ga0207687_10000001 Ga0207687_10000001562 410
158 3300025927 Ga0207687_10000008 Ga0207687_10000008452 410
159 3300025949 Ga0207667_10000008 Ga0207667_10000008639 410
160 3300049773 Ga0501276_000302 Ga0501276_000302_674_1906 410
161 3300050491 nmdc:mga00v17_13450_c1 nmdc:mga00v17_13450_c1_1163_2395 410
162 3300050493 nmdc:mga0k408_228_c1 nmdc:mga0k408_228_c1_21892_23124 410
163 3300050493 nmdc:mga0k408_419_c2 nmdc:mga0k408_419_c2_6265_7497 410
164 3300050494 nmdc:mga06z11_137_c1 nmdc:mga06z11_137_c1_12651_13883 410
165 3300053129 Ga0500628_002713 Ga0500628_002713_1015_2250 410
166 3300053153 Ga0500616_0000005 Ga0500616_0000005_673610_674854 410

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02491

SHS2_FTSA

SHS2 domain inserted in FTSA

93

172

0.99

PF14450

FtsA

Cell division protein FtsA

217

383

0.97

PF06723

MreB_Mbl

MreB/Mbl protein

171

376

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7q6d-assembly1.cif.gz_A e. coli ftsa 1-405 atp 3 ni 0.903 6 379
7q6g-assembly1.cif.gz_A xenorhabdus poinarii ftsa 1-396 adp 0.894 6 380
7q6i-assembly4.cif.gz_D vibrio maritimus ftsa 1-396 atp and ftsn 1-29, bent tetramers in double filament arrangement 0.8935 7 383
7q6i-assembly2.cif.gz_B vibrio maritimus ftsa 1-396 atp and ftsn 1-29, bent tetramers in double filament arrangement 0.8917 7 379
7q6i-assembly4.cif.gz_D vibrio maritimus ftsa 1-396 atp and ftsn 1-29, bent tetramers in double filament arrangement 0.8911 7 383
ID Description Score Start End Superfamily
3wqtB02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9381 200 350 3.30.420.40
af_O07325_1_80_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9243 5 84 3.30.420.40
af_P0ABH0_1_81_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9228 1 77 3.30.420.40
3wqtB02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9051 200 350 3.30.420.40
2ychA03 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9003 205 347 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A2X4WXJ4-F1-model_v4 Cell division protein FtsA 0.9482 177 264 GO:0009898
GO:0032153
GO:0051301
AF-A0A4Q0AKC8-F1-model_v4 Cell division protein FtsA 0.9463 1 380 GO:0009898
GO:0032153
GO:0043093
AF-K1Y694-F1-model_v4 Cell division protein FtsA 0.9422 171 380 GO:0009898
GO:0032153
GO:0051301
AF-A0A6V8P561-F1-model_v4 Cell division protein FtsA 0.9364 210 380 GO:0009898
GO:0032153
GO:0051301
AF-A0A7C4RA25-F1-model_v4 Cell division protein FtsA 0.9354 1 381 GO:0009898
GO:0032153
GO:0043093

Feature Viewer

pLDDT pTM Quality
87.34 0.86 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map