F246209

General Info

Members Datasets Scaffolds Average Seq Length
165 112 165 560

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10005806|Ga0157380_100058063
Length 595
Sequence MATDICAERPAPRAVKVQWPDFAGGVNNMAELPGIERETLDVDVVIVGAGPAGLAAAYQLATLIKAHNESAAERKLEGLSIAVLEKGKEIGSHGISGAVMDPRGIAELMPDWLERGCPVESPVTSDAFWYLFENFKIAAPIMPPPLQNHGNYVVSLGEFVRWMAPIVGDMGVDLFPEFPASRVLVEEGRVVGVRTGDKGIDKNGEAKPNFEPGVDVRAKVTILAEGPRGTLTKQLDGMFDLSAGKNPQVYSVGVKELWQLPDDRFAPGTVIHTMGWPLDMETFGGGFIYGMKDRIVDIGLVVGLDYRNPTTDPHHEFQRYKLHPAVREILQGGKMISAGAKAIPEGGYFSMPRMYGDGFMIAGDSAGYLNGARLKGIHLGIKSGMLAAEAAFHALLNEDYSSNQLREYEGLFEASWAREELYSQRNFHQAFEHGQIAGMVNAGLGMVTGGRGFGFADRLDGHAGHELMTRIKRYFGDEHPHPPEKIKFDNTYTFDKVSDVYYGGVLHEENQPAHLLIADTEVCITRCTEEYGNPCLHFCPAAVYEPQPTADGRGKVPFLNFTNCFHCKTCDIMDPYQVITWVPPEGGGGPNYNKC

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
51 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
75 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
76 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
77 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
78 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
79 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
85 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
92 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
93 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
94 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
95 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
96 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
97 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
98 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
105 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
110 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
111 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
112 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.82
Nodule 0
Rhizoplane 0
Rhizosphere 93.33
Stem 0
Stem Tuber 0
Unclassified 4.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10030884 3300005327 Bacteria 4304
2 Ga0070683_100000050 3300005329 Bacteria 90949
3 Ga0070670_100000143 3300005331 Bacteria 66979
4 Ga0070670_100025357 3300005331 Bacteria 5102
5 Ga0070670_100123940 3300005331 Bacteria 2230
6 Ga0070670_100130478 3300005331 Bacteria 2170
7 Ga0070682_100000015 3300005337 Bacteria 249390
8 Ga0068868_100001102 3300005338 Bacteria 18474
9 Ga0070689_100002484 3300005340 Bacteria 12053
10 Ga0070675_100000023 3300005354 Bacteria 122380
11 Ga0070675_100000932 3300005354 Bacteria 20810
12 Ga0070675_100031158 3300005354 Bacteria 4310
13 Ga0070673_100076631 3300005364 Bacteria 2701
14 Ga0070688_100062936 3300005365 Bacteria 2350
15 Ga0070701_10000432 3300005438 Bacteria 14298
16 Ga0070700_100000163 3300005441 Bacteria 38495
17 Ga0070708_100047095 3300005445 Bacteria 3808
18 Ga0070685_10006812 3300005466 Bacteria 5834
19 Ga0070685_10011466 3300005466 Bacteria 4640
20 Ga0070706_100056566 3300005467 Bacteria 3619
21 Ga0070707_100017528 3300005468 Bacteria 6735
22 Ga0070707_100040301 3300005468 Bacteria 4469
23 Ga0070707_100093709 3300005468 Bacteria 2908
24 Ga0070699_100014726 3300005518 Bacteria 6726
25 Ga0070699_100045120 3300005518 Bacteria 3815
26 Ga0068853_100103010 3300005539 Bacteria 2526
27 Ga0070672_100000054 3300005543 Bacteria 50993
28 Ga0070695_100003215 3300005545 Bacteria 9534
29 Ga0070702_100013899 3300005615 Bacteria 4074
30 Ga0068852_100133360 3300005616 Bacteria 2290
31 Ga0068859_100000349 3300005617 Bacteria 45803
32 Ga0068864_100000009 3300005618 Bacteria 373756
33 Ga0068864_100136080 3300005618 Bacteria 2212
34 Ga0068861_100062666 3300005719 Bacteria 2857
35 Ga0068870_10002173 3300005840 Bacteria 8125
36 Ga0068858_100201431 3300005842 Bacteria 1882
37 Ga0070717_10000691 3300006028 Bacteria 21743
38 Ga0075367_10008629 3300006178 Bacteria 5286
39 Ga0075370_10023374 3300006353 Bacteria 3404
40 Ga0075430_100042342 3300006846 Bacteria 3851
41 Ga0075431_100026535 3300006847 Bacteria 5943
42 Ga0075431_100162707 3300006847 Bacteria 2294
43 Ga0075434_100132775 3300006871 Bacteria 2509
44 Ga0097620_100000349 3300006931 Bacteria 45803
45 Ga0075435_100000295 3300007076 Bacteria 30910
46 Ga0075435_100095414 3300007076 Bacteria 2460
47 Ga0105240_10005057 3300009093 Bacteria 19775
48 Ga0105240_10034509 3300009093 Bacteria 6525
49 Ga0111539_10000088 3300009094 Bacteria 95177
50 Ga0111539_10006938 3300009094 Bacteria 14541
51 Ga0111539_10156321 3300009094 Bacteria 2668
52 Ga0105245_10000006 3300009098 Bacteria 330960
53 Ga0105245_10000214 3300009098 Bacteria 55083
54 Ga0105245_10001241 3300009098 Bacteria 23017
55 Ga0105242_10005569 3300009176 Bacteria 9717
56 Ga0105242_10016510 3300009176 Bacteria 5740
57 Ga0105248_10118654 3300009177 Bacteria 2984
58 Ga0105238_10000115 3300009551 Bacteria 89300
59 Ga0157370_10122869 3300013104 Bacteria 2424
60 Ga0157369_10000166 3300013105 Bacteria 93696
61 Ga0157374_10000006 3300013296 Bacteria 640284
62 Ga0157378_10035107 3300013297 Bacteria 4434
63 Ga0157378_10035126 3300013297 Bacteria 4433
64 Ga0157378_10044515 3300013297 Bacteria 3941
65 Ga0163162_10037384 3300013306 Bacteria 4844
66 Ga0157375_10000011 3300013308 Bacteria 334557
67 Ga0157375_10000022 3300013308 Bacteria 239765
68 Ga0157375_10001789 3300013308 Bacteria 18428
69 Ga0157380_10005806 3300014326 Bacteria 8640
70 Ga0157380_10052085 3300014326 Bacteria 3240
71 Ga0157377_10000011 3300014745 Bacteria 305350
72 Ga0157377_10000099 3300014745 Bacteria 61280
73 Ga0157376_10000009 3300014969 Bacteria 340244
74 Ga0213873_10000004 3300021358 Bacteria 774374
75 Ga0213873_10001772 3300021358 Bacteria 3634
76 Ga0213872_10017478 3300021361 Bacteria 3313
77 Ga0213876_10000007 3300021384 Bacteria 670340
78 Ga0213876_10000018 3300021384 Bacteria 282299
79 Ga0213876_10002308 3300021384 Bacteria 11255
80 Ga0207643_10004836 3300025908 Bacteria 7213
81 Ga0207684_10100585 3300025910 Bacteria 2471
82 Ga0207684_10108606 3300025910 Bacteria 2374
83 Ga0207695_10011727 3300025913 Bacteria 10586
84 Ga0207646_10005047 3300025922 Bacteria 14044
85 Ga0207646_10045832 3300025922 Bacteria 3924
86 Ga0207694_10000001 3300025924 Bacteria 4078485
87 Ga0207650_10000070 3300025925 Bacteria 138201
88 Ga0207650_10020481 3300025925 Bacteria 4666
89 Ga0207650_10114187 3300025925 Bacteria 2095
90 Ga0207659_10000009 3300025926 Bacteria 308304
91 Ga0207659_10008830 3300025926 Bacteria 6279
92 Ga0207659_10033035 3300025926 Bacteria 3557
93 Ga0207659_10049712 3300025926 Bacteria 2975
94 Ga0207687_10000006 3300025927 Bacteria 641680
95 Ga0207687_10001085 3300025927 Bacteria 18494
96 Ga0207687_10021327 3300025927 Bacteria 4303
97 Ga0207664_10023648 3300025929 Bacteria 4606
98 Ga0207664_10041759 3300025929 Bacteria 3575
99 Ga0207644_10015326 3300025931 Bacteria 5142
100 Ga0207686_10006917 3300025934 Bacteria 6105
101 Ga0207670_10000549 3300025936 Bacteria 20734
102 Ga0207691_10000102 3300025940 Bacteria 75317
103 Ga0207691_10014396 3300025940 Bacteria 7542
104 Ga0207661_10000013 3300025944 Bacteria 348811
105 Ga0207677_10000077 3300026023 Bacteria 80916
106 Ga0207677_10000081 3300026023 Bacteria 78954
107 Ga0207703_10000215 3300026035 Bacteria 67474
108 Ga0207639_10000084 3300026041 Bacteria 80748
109 Ga0207639_10179473 3300026041 Bacteria 1800
110 Ga0207708_10000010 3300026075 Bacteria 227178
111 Ga0207676_10000007 3300026095 Bacteria 591074
112 Ga0207676_10118872 3300026095 Bacteria 2225
113 Ga0207676_10120345 3300026095 Bacteria 2213
114 Ga0207675_100086511 3300026118 Bacteria 2943
115 Ga0207428_10000148 3300027907 Bacteria 95185
116 Ga0207428_10110748 3300027907 Bacteria 2113
117 Ga0307511_10005824 3300030521 Bacteria 12460
118 Ga0373932_0001622 3300035112 Bacteria 6176
119 Ga0373943_0069894 3300035170 Bacteria 1775
120 Ga0373946_0003261 3300035171 Bacteria 5760
121 Ga0373933_0081181 3300035724 Bacteria 1989
122 Ga0373947_0052105 3300035725 Bacteria 2465
123 Ga0373937_0045666 3300036401 Bacteria 4003
124 Ga0373925_0003832 3300037068 Bacteria 11539
125 Ga0395905_0148711 3300037471 Bacteria 2204
126 Ga0436365_0414850 3300039437 Bacteria 153664
127 Ga0436365_1391222 3300039437 Bacteria 77176
128 Ga0436365_1815404 3300039437 Bacteria 22158
129 Ga0436360_1153622 3300039438 Bacteria 2280
130 Ga0436361_0738714 3300039447 Bacteria 102195
131 Ga0436361_1145616 3300039447 Bacteria 3926
132 Ga0436363_1032235 3300039450 Bacteria 2782
133 Ga0436362_0062270 3300039453 Bacteria 3965
134 Ga0436362_0290430 3300039453 Bacteria 772596
135 Ga0436362_1113633 3300039453 Bacteria 8899
136 Ga0451577_0032432 3300042876 Bacteria 4706
137 Ga0451576_0010407 3300045051 Bacteria 10675
138 Ga0451576_0069210 3300045051 Bacteria 3673
139 Ga0495629_0000002 3300046459 Bacteria 686975
140 Ga0495582_0068082 3300046473 Bacteria 1968
141 Ga0495620_0000567 3300046515 Bacteria 23351
142 Ga0495630_0125878 3300046517 Bacteria 1945
143 Ga0495666_0002244 3300046526 Bacteria 9613
144 Ga0495666_0020280 3300046526 Bacteria 3295
145 Ga0495586_0000481 3300046535 Bacteria 23895
146 Ga0495635_0011788 3300046663 Bacteria 6130
147 Ga0495600_0001523 3300046809 Bacteria 12871
148 Ga0495636_0000217 3300047318 Bacteria 22549
149 Ga0495676_0001710 3300047321 Bacteria 19152
150 Ga0495680_0000399 3300047322 Bacteria 48640
151 Ga0501072_0018874 3300049588 Bacteria 5320
152 Ga0501076_0108526 3300049592 Bacteria 2242
153 Ga0501080_0073131 3300049742 Bacteria 3189
154 Ga0501081_0176766 3300049743 Bacteria 1543
155 nmdc:mga0yw44_47091_c1 3300050492 Bacteria 2593
156 nmdc:mga05p37_49033_c1 3300050507 Bacteria 5193
157 nmdc:mga06r32_126056_c1 3300050510 Bacteria 2529
158 nmdc:mga06r32_1644_c1 3300050510 Bacteria 20183
159 nmdc:mga08y16_189899_c1 3300050511 Bacteria 2131
160 nmdc:mga08y16_41_c1 3300050511 Bacteria 128981
161 nmdc:mga0n895_123029_c1 3300050512 Bacteria 2616
162 nmdc:mga0rr50_1162_c1 3300050513 Bacteria 12973
163 nmdc:mga0rr50_218_c1 3300050513 Bacteria 30916
164 nmdc:mga08x19_197_c1 3300050514 Bacteria 47258
165 Ga0495655_0000398 3300053083 Bacteria 7363

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035724 Ga0373933_0081181 Ga0373933_0081181_510_1964 484
2 3300035170 Ga0373943_0069894 Ga0373943_0069894_253_1761 499
3 3300049743 Ga0501081_0176766 Ga0501081_0176766_24_1532 499
4 3300005331 Ga0070670_100130478 Ga0070670_1001304782 504
5 3300009176 Ga0105242_10005569 Ga0105242_100055695 529
6 3300005354 Ga0070675_100000932 Ga0070675_1000009322 534
7 3300005354 Ga0070675_100031158 Ga0070675_1000311582 534
8 3300005364 Ga0070673_100076631 Ga0070673_1000766312 534
9 3300005365 Ga0070688_100062936 Ga0070688_1000629362 534
10 3300005466 Ga0070685_10011466 Ga0070685_100114663 534
11 3300005617 Ga0068859_100000349 Ga0068859_1000003493 534
12 3300005618 Ga0068864_100136080 Ga0068864_1001360802 534
13 3300006931 Ga0097620_100000349 Ga0097620_1000003493 534
14 3300009094 Ga0111539_10006938 Ga0111539_100069387 534
15 3300009094 Ga0111539_10156321 Ga0111539_101563212 534
16 3300014326 Ga0157380_10052085 Ga0157380_100520853 534
17 3300025926 Ga0207659_10008830 Ga0207659_100088305 534
18 3300025926 Ga0207659_10033035 Ga0207659_100330353 534
19 3300025926 Ga0207659_10049712 Ga0207659_100497121 534
20 3300026095 Ga0207676_10120345 Ga0207676_101203452 534
21 3300027907 Ga0207428_10110748 Ga0207428_101107481 534
22 3300050511 nmdc:mga08y16_189899_c1 nmdc:mga08y16_189899_c1_128_1735 534
23 3300025922 Ga0207646_10045832 Ga0207646_100458321 537
24 3300006178 Ga0075367_10008629 Ga0075367_100086294 538
25 3300006353 Ga0075370_10023374 Ga0075370_100233743 538
26 3300050492 nmdc:mga0yw44_47091_c1 nmdc:mga0yw44_47091_c1_89_1756 538
27 3300047318 Ga0495636_0000217 Ga0495636_0000217_20765_22462 540
28 3300013297 Ga0157378_10044515 Ga0157378_100445152 547
29 3300025931 Ga0207644_10015326 Ga0207644_100153265 547
30 3300013297 Ga0157378_10035126 Ga0157378_100351264 549
31 3300021361 Ga0213872_10017478 Ga0213872_100174784 549
32 3300039438 Ga0436360_1153622 Ga0436360_1153622_358_2037 549
33 3300039447 Ga0436361_0738714 Ga0436361_0738714_35108_36769 549
34 3300039447 Ga0436361_1145616 Ga0436361_1145616_1932_3611 549
35 3300009551 Ga0105238_10000115 Ga0105238_1000011571 550
36 3300013104 Ga0157370_10122869 Ga0157370_101228692 550
37 3300025924 Ga0207694_10000001 Ga0207694_100000013224 550
38 3300046459 Ga0495629_0000002 Ga0495629_0000002_438502_440208 550
39 3300046473 Ga0495582_0068082 Ga0495582_0068082_76_1782 550
40 3300049588 Ga0501072_0018874 Ga0501072_0018874_1719_3383 550
41 3300049592 Ga0501076_0108526 Ga0501076_0108526_137_1801 550
42 3300005518 Ga0070699_100045120 Ga0070699_1000451203 551
43 3300009093 Ga0105240_10034509 Ga0105240_100345094 551
44 3300005329 Ga0070683_100000050 Ga0070683_10000005087 555
45 3300005331 Ga0070670_100000143 Ga0070670_10000014316 555
46 3300013105 Ga0157369_10000166 Ga0157369_1000016622 555
47 3300014969 Ga0157376_10000009 Ga0157376_10000009184 555
48 3300025925 Ga0207650_10000070 Ga0207650_1000007086 555
49 3300025944 Ga0207661_10000013 Ga0207661_10000013115 555
50 3300026023 Ga0207677_10000077 Ga0207677_1000007735 555
51 3300005331 Ga0070670_100025357 Ga0070670_1000253573 556
52 3300006846 Ga0075430_100042342 Ga0075430_1000423423 556
53 3300006871 Ga0075434_100132775 Ga0075434_1001327752 556
54 3300013296 Ga0157374_10000006 Ga0157374_10000006170 556
55 3300013308 Ga0157375_10001789 Ga0157375_1000178914 556
56 3300014745 Ga0157377_10000011 Ga0157377_1000001115 556
57 3300025925 Ga0207650_10020481 Ga0207650_100204812 556
58 3300036401 Ga0373937_0045666 Ga0373937_0045666_312_2000 556
59 3300045051 Ga0451576_0010407 Ga0451576_0010407_7144_8835 556
60 3300045051 Ga0451576_0069210 Ga0451576_0069210_1531_3222 556
61 3300046526 Ga0495666_0020280 Ga0495666_0020280_1575_3263 556
62 3300013297 Ga0157378_10035107 Ga0157378_100351075 557
63 3300006847 Ga0075431_100162707 Ga0075431_1001627072 558
64 3300009177 Ga0105248_10118654 Ga0105248_101186542 558
65 3300025910 Ga0207684_10108606 Ga0207684_101086062 558
66 3300050510 nmdc:mga06r32_126056_c1 nmdc:mga06r32_126056_c1_426_2114 558
67 3300005545 Ga0070695_100003215 Ga0070695_1000032153 559
68 3300005616 Ga0068852_100133360 Ga0068852_1001333602 559
69 3300021358 Ga0213873_10001772 Ga0213873_100017722 559
70 3300021384 Ga0213876_10000018 Ga0213876_10000018231 559
71 3300039437 Ga0436365_0414850 Ga0436365_0414850_67178_68875 559
72 3300039453 Ga0436362_1113633 Ga0436362_1113633_546_2243 559
73 3300042876 Ga0451577_0032432 Ga0451577_0032432_686_2536 559
74 3300005331 Ga0070670_100123940 Ga0070670_1001239402 560
75 3300005468 Ga0070707_100040301 Ga0070707_1000403012 560
76 3300006028 Ga0070717_10000691 Ga0070717_100006916 560
77 3300007076 Ga0075435_100000295 Ga0075435_10000029527 560
78 3300013306 Ga0163162_10037384 Ga0163162_100373842 560
79 3300025925 Ga0207650_10114187 Ga0207650_101141872 560
80 3300025929 Ga0207664_10023648 Ga0207664_100236482 560
81 3300025929 Ga0207664_10041759 Ga0207664_100417593 560
82 3300025940 Ga0207691_10014396 Ga0207691_100143965 560
83 3300037471 Ga0395905_0148711 Ga0395905_0148711_340_2070 560
84 3300039453 Ga0436362_0062270 Ga0436362_0062270_1460_3196 560
85 3300050513 nmdc:mga0rr50_218_c1 nmdc:mga0rr50_218_c1_25449_27134 560
86 3300050514 nmdc:mga08x19_197_c1 nmdc:mga08x19_197_c1_24478_26163 560
87 3300053083 Ga0495655_0000398 Ga0495655_0000398_2296_3981 560
88 3300035171 Ga0373946_0003261 Ga0373946_0003261_781_2487 562
89 3300035725 Ga0373947_0052105 Ga0373947_0052105_25_1731 562
90 3300037068 Ga0373925_0003832 Ga0373925_0003832_6316_8022 562
91 3300046517 Ga0495630_0125878 Ga0495630_0125878_80_1786 562
92 3300046526 Ga0495666_0002244 Ga0495666_0002244_4769_6475 562
93 3300046535 Ga0495586_0000481 Ga0495586_0000481_7054_8760 562
94 3300046663 Ga0495635_0011788 Ga0495635_0011788_1454_3160 562
95 3300046809 Ga0495600_0001523 Ga0495600_0001523_6048_7754 562
96 3300047321 Ga0495676_0001710 Ga0495676_0001710_6149_7855 562
97 3300047322 Ga0495680_0000399 Ga0495680_0000399_401_2107 562
98 3300050512 nmdc:mga0n895_123029_c1 nmdc:mga0n895_123029_c1_77_1786 562
99 3300005445 Ga0070708_100047095 Ga0070708_1000470953 564
100 3300005467 Ga0070706_100056566 Ga0070706_1000565662 564
101 3300005468 Ga0070707_100017528 Ga0070707_1000175283 564
102 3300005518 Ga0070699_100014726 Ga0070699_1000147263 564
103 3300014745 Ga0157377_10000099 Ga0157377_1000009927 564
104 3300025910 Ga0207684_10100585 Ga0207684_101005852 564
105 3300025922 Ga0207646_10005047 Ga0207646_100050473 564
106 3300026095 Ga0207676_10118872 Ga0207676_101188722 564
107 3300035112 Ga0373932_0001622 Ga0373932_0001622_3814_5514 564
108 3300050507 nmdc:mga05p37_49033_c1 nmdc:mga05p37_49033_c1_73_1773 564
109 3300005327 Ga0070658_10030884 Ga0070658_100308844 565
110 3300005337 Ga0070682_100000015 Ga0070682_1000000154 565
111 3300005338 Ga0068868_100001102 Ga0068868_10000110215 565
112 3300005340 Ga0070689_100002484 Ga0070689_1000024843 565
113 3300005354 Ga0070675_100000023 Ga0070675_10000002374 565
114 3300005438 Ga0070701_10000432 Ga0070701_100004328 565
115 3300005441 Ga0070700_100000163 Ga0070700_10000016310 565
116 3300005466 Ga0070685_10006812 Ga0070685_100068125 565
117 3300005468 Ga0070707_100093709 Ga0070707_1000937091 565
118 3300005539 Ga0068853_100103010 Ga0068853_1001030102 565
119 3300005543 Ga0070672_100000054 Ga0070672_10000005434 565
120 3300005615 Ga0070702_100013899 Ga0070702_1000138993 565
121 3300005618 Ga0068864_100000009 Ga0068864_10000000968 565
122 3300005719 Ga0068861_100062666 Ga0068861_1000626662 565
123 3300005840 Ga0068870_10002173 Ga0068870_100021734 565
124 3300005842 Ga0068858_100201431 Ga0068858_1002014311 565
125 3300006847 Ga0075431_100026535 Ga0075431_1000265354 565
126 3300007076 Ga0075435_100095414 Ga0075435_1000954142 565
127 3300009093 Ga0105240_10005057 Ga0105240_100050578 565
128 3300009094 Ga0111539_10000088 Ga0111539_1000008883 565
129 3300009098 Ga0105245_10000006 Ga0105245_10000006223 565
130 3300009098 Ga0105245_10000214 Ga0105245_1000021456 565
131 3300009098 Ga0105245_10001241 Ga0105245_100012418 565
132 3300009176 Ga0105242_10016510 Ga0105242_100165103 565
133 3300013308 Ga0157375_10000011 Ga0157375_10000011149 565
134 3300013308 Ga0157375_10000022 Ga0157375_1000002238 565
135 3300014326 Ga0157380_10005806 Ga0157380_100058063 565
136 3300021358 Ga0213873_10000004 Ga0213873_10000004338 565
137 3300021384 Ga0213876_10000007 Ga0213876_10000007338 565
138 3300021384 Ga0213876_10002308 Ga0213876_100023083 565
139 3300025908 Ga0207643_10004836 Ga0207643_100048364 565
140 3300025913 Ga0207695_10011727 Ga0207695_100117275 565
141 3300025926 Ga0207659_10000009 Ga0207659_1000000975 565
142 3300025927 Ga0207687_10000006 Ga0207687_10000006216 565
143 3300025927 Ga0207687_10001085 Ga0207687_1000108511 565
144 3300025927 Ga0207687_10021327 Ga0207687_100213273 565
145 3300025934 Ga0207686_10006917 Ga0207686_100069174 565
146 3300025936 Ga0207670_10000549 Ga0207670_100005499 565
147 3300025940 Ga0207691_10000102 Ga0207691_1000010237 565
148 3300026023 Ga0207677_10000081 Ga0207677_1000008125 565
149 3300026035 Ga0207703_10000215 Ga0207703_1000021550 565
150 3300026041 Ga0207639_10000084 Ga0207639_1000008427 565
151 3300026041 Ga0207639_10179473 Ga0207639_101794731 565
152 3300026075 Ga0207708_10000010 Ga0207708_10000010212 565
153 3300026095 Ga0207676_10000007 Ga0207676_10000007182 565
154 3300026118 Ga0207675_100086511 Ga0207675_1000865112 565
155 3300027907 Ga0207428_10000148 Ga0207428_100001484 565
156 3300030521 Ga0307511_10005824 Ga0307511_100058248 565
157 3300039437 Ga0436365_1391222 Ga0436365_1391222_36226_37965 565
158 3300039437 Ga0436365_1815404 Ga0436365_1815404_15541_17244 565
159 3300039450 Ga0436363_1032235 Ga0436363_1032235_1034_2737 565
160 3300039453 Ga0436362_0290430 Ga0436362_0290430_395234_396973 565
161 3300046515 Ga0495620_0000567 Ga0495620_0000567_933_2672 565
162 3300049742 Ga0501080_0073131 Ga0501080_0073131_174_1877 565
163 3300050510 nmdc:mga06r32_1644_c1 nmdc:mga06r32_1644_c1_17081_18784 565
164 3300050511 nmdc:mga08y16_41_c1 nmdc:mga08y16_41_c1_90884_92596 565
165 3300050513 nmdc:mga0rr50_1162_c1 nmdc:mga0rr50_1162_c1_10979_12682 565

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21162

ETFQO_UQ-bd

ETF-QO, ubiquinone-binding

250

343

0.98

PF05187

ETF_QO

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S

490

593

0.97

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

46

119

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2gmj-assembly2.cif.gz_B structure of porcine electron transfer flavoprotein-ubiquinone oxidoreductase 0.9292 3 565
2gmj-assembly2.cif.gz_B structure of porcine electron transfer flavoprotein-ubiquinone oxidoreductase 0.9196 3 565
3atr-assembly1.cif.gz_A geranylgeranyl reductase (ggr) from sulfolobus acidocaldarius co-crystallized with its ligand 0.859 10 396
7koe-assembly1.cif.gz_G electron bifurcating flavoprotein fix/etfabcx 0.8472 11 403
4opu-assembly1.cif.gz_A constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase 0.8227 10 397
ID Description Score Start End Superfamily
2gmjB02 Alpha Beta;2-Layer Sandwich;D-Amino Acid Oxidase; Chain A, domain 2; 0.9263 91 318 3.30.9.90
af_Q11190_496_592_3.30.70.20 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8971 465 560 3.30.70.20
af_Q11190_496_592_3.30.70.20 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.88 465 560 3.30.70.20
2gmjA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8693 5 392 3.50.50.60
af_Q46904_1_359_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8454 7 391 3.50.50.60
ID Description Score Start End GO Terms
AF-X0WQ39-F1-model_v4 ETF-QO/FixC ubiquinone-binding domain-containing protein 0.9898 93 352 GO:0004174
AF-A0A382UXK0-F1-model_v4 ETF-QO/FixC ubiquinone-binding domain-containing protein 0.9882 153 440 GO:0004174
AF-A0A381W6J9-F1-model_v4 ETF-QO/FixC ubiquinone-binding domain-containing protein 0.9865 17 359 GO:0004174
AF-W7WNR4-F1-model_v4 deleted 0.9858 93 352
AF-A0A353H5H8-F1-model_v4 Electron transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) (EC 1.5.5.1) 0.9852 6 399 GO:0004174
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
89.13 0.92 High
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Predicted Structure (AlphaFold2)

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