F244966

General Info

Members Datasets Scaffolds Average Seq Length
164 139 328 338

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2512564039|2512736256
Length 343
Sequence ILSPIAWRTPPRHYGPWERVVSLLMEGLVKENMDVTLYATGDSVTSAKLRGVCARPYEEDREIDPKVWECLHISALMEQAEEYDIIHNHYDFLPLSYSGLIDTPMVTTIHGFSSPKILPVYRKYNQKTHYVSISDADRHPDLKYIRTVYHGIDLENFAFQPGPGEYLAYFGRIHPDKGTREAIEAAKQAGMKLLIAGIIQDRDYYERYVAPELSGDIRYIGSVGPAERNEVLGRAYALLHPIYFDEPFGLSVVEAMACGTPVLAFRRGSMPELIQDGRNDYIVSGVNEMVERLADIAGISREGCRRRVEERFTRERMVRDYISVYREILEARKAPERREPAMS

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
40 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
41 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
49 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
50 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
51 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
52 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
84 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
88 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
89 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
90 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
91 3300042116 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126F_E14_082316_1792 Metagenome Rhizosphere
92 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
93 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
96 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
97 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
98 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
99 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
100 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
101 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
104 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
105 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
106 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
107 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
108 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
109 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
110 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
111 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
121 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
122 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
129 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
130 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
133 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
134 2643221588 Altererythrobacter sp. Root672 Isolate Unclassified
135 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
136 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
137 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
138 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
139 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.73
Metatranscriptomes 0
Isolates 4.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.22
Nodule 0
Rhizoplane 7.93
Rhizosphere 84.76
Stem 0
Stem Tuber 0
Unclassified 5.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10025022 3300001979 Bacteria 2017
2 rootH2_10026205 3300003320 Bacteria 8609
3 rootH1_10065238 3300003323 Unclassified 2929
4 Ga0070658_10035139 3300005327 Bacteria 4036
5 Ga0070658_10326367 3300005327 Bacteria 1311
6 Ga0070683_100002175 3300005329 Bacteria 15500
7 Ga0070683_100012072 3300005329 Bacteria 7495
8 Ga0070690_100002895 3300005330 Bacteria 9256
9 Ga0070690_100184002 3300005330 Bacteria 1445
10 Ga0070670_100249479 3300005331 Bacteria 1546
11 Ga0068869_100176614 3300005334 Bacteria 1672
12 Ga0070666_10096475 3300005335 Bacteria 2035
13 Ga0070680_100357522 3300005336 Bacteria 1242
14 Ga0070682_100060763 3300005337 Bacteria 2390
15 Ga0068868_100000047 3300005338 Bacteria 67920
16 Ga0070660_100000540 3300005339 Bacteria 25324
17 Ga0070660_100003304 3300005339 Bacteria 11084
18 Ga0070661_100080491 3300005344 Bacteria 2404
19 Ga0070692_10073284 3300005345 Bacteria 1829
20 Ga0070669_100192068 3300005353 Bacteria 1602
21 Ga0070659_100000022 3300005366 Bacteria 154091
22 Ga0070659_100006780 3300005366 Bacteria 8287
23 Ga0070662_100028453 3300005457 Bacteria 3889
24 Ga0070681_10061008 3300005458 Bacteria 3747
25 Ga0070706_100159842 3300005467 Bacteria 2103
26 Ga0070698_100096497 3300005471 Bacteria 2933
27 Ga0070679_100055830 3300005530 Bacteria 3934
28 Ga0070679_100158772 3300005530 Bacteria 2236
29 Ga0070679_100159806 3300005530 Bacteria 2228
30 Ga0070684_100008785 3300005535 Bacteria 7922
31 Ga0070684_100060100 3300005535 Bacteria 3323
32 Ga0070684_100231640 3300005535 Bacteria 1687
33 Ga0068853_100023386 3300005539 Bacteria 5172
34 Ga0070693_100266660 3300005547 Bacteria 1141
35 Ga0068855_100297077 3300005563 Bacteria 1789
36 Ga0070664_100016443 3300005564 Bacteria 6065
37 Ga0068854_100020380 3300005578 Bacteria 4485
38 Ga0068856_100389823 3300005614 Bacteria 1413
39 Ga0068852_100192860 3300005616 Bacteria 1923
40 Ga0068860_100003973 3300005843 Bacteria 15185
41 Ga0068862_100000291 3300005844 Bacteria 55364
42 Ga0068862_100089515 3300005844 Bacteria 2679
43 Ga0081539_10000894 3300005985 Bacteria 56997
44 Ga0081539_10001239 3300005985 Bacteria 45441
45 Ga0097621_100057980 3300006237 Bacteria 3169
46 Ga0105245_10030408 3300009098 Bacteria 4775
47 Ga0105245_10111349 3300009098 Bacteria 2546
48 Ga0114129_10112305 3300009147 Bacteria 3758
49 Ga0105242_10229105 3300009176 Unclassified 1664
50 Ga0105246_10138340 3300011119 Unclassified 1828
51 Ga0157373_10013209 3300013100 Bacteria 6062
52 Ga0157371_10037519 3300013102 Bacteria 3468
53 Ga0157371_10207152 3300013102 Bacteria 1407
54 Ga0157370_10073225 3300013104 Bacteria 3232
55 Ga0157370_10140657 3300013104 Bacteria 2249
56 Ga0157369_10090239 3300013105 Bacteria 3272
57 Ga0157374_10039453 3300013296 Bacteria 4345
58 Ga0157378_10052980 3300013297 Bacteria 3611
59 Ga0157372_10103010 3300013307 Bacteria 3261
60 Ga0157372_10103206 3300013307 Unclassified 3258
61 Ga0157372_10321618 3300013307 Bacteria 1801
62 Ga0157375_10506203 3300013308 Bacteria 1372
63 Ga0157380_10277536 3300014326 Bacteria 1531
64 Ga0182008_10032378 3300014497 Bacteria 2627
65 Ga0182006_1011420 3300015261 Bacteria 3908
66 Ga0182007_10014374 3300015262 Bacteria 2987
67 Ga0209758_1008189 3300025297 Bacteria 6856
68 Ga0207710_10004697 3300025900 Bacteria 5927
69 Ga0207647_10141286 3300025904 Bacteria 1411
70 Ga0207645_10239386 3300025907 Bacteria 1199
71 Ga0207705_10123660 3300025909 Bacteria 1921
72 Ga0207684_10273155 3300025910 Bacteria 1458
73 Ga0207707_10274151 3300025912 Unclassified 1462
74 Ga0207660_10395238 3300025917 Bacteria 1113
75 Ga0207657_10004251 3300025919 Bacteria 15171
76 Ga0207657_10007324 3300025919 Bacteria 11321
77 Ga0207652_10030858 3300025921 Bacteria 4494
78 Ga0207650_10214884 3300025925 Bacteria 1545
79 Ga0207690_10000003 3300025932 Bacteria 783011
80 Ga0207706_10000817 3300025933 Bacteria 32335
81 Ga0207665_10071913 3300025939 Unclassified 2362
82 Ga0207691_10067504 3300025940 Bacteria 3233
83 Ga0207689_10062207 3300025942 Bacteria 3069
84 Ga0207661_10023165 3300025944 Bacteria 4689
85 Ga0207661_10038618 3300025944 Bacteria 3743
86 Ga0207661_10067623 3300025944 Bacteria 2906
87 Ga0207679_10053797 3300025945 Bacteria 2960
88 Ga0207667_10333444 3300025949 Bacteria 1548
89 Ga0207712_10000054 3300025961 Bacteria 148878
90 Ga0207640_10038315 3300025981 Bacteria 3024
91 Ga0207677_10000107 3300026023 Bacteria 67596
92 Ga0207639_10267463 3300026041 Bacteria 1498
93 Ga0207702_10034459 3300026078 Bacteria 4233
94 Ga0207648_10094705 3300026089 Bacteria 2611
95 Ga0207698_10346981 3300026142 Bacteria 1401
96 Ga0268266_10003524 3300028379 Bacteria 15531
97 Ga0268265_10000299 3300028380 Bacteria 55179
98 Ga0268264_10006025 3300028381 Bacteria 10259
99 Ga0307513_10091263 3300031456 Bacteria 3105
100 Ga0307416_100157318 3300032002 Bacteria 2094
101 Ga0307411_10156981 3300032005 Bacteria 1698
102 Ga0373926_0078571 3300035083 Bacteria 1218
103 Ga0373923_0011602 3300035111 Bacteria 3239
104 Ga0395900_0079697 3300037418 Bacteria 3365
105 Ga0395898_0010934 3300037466 Bacteria 9465
106 Ga0439431_0005484 3300041997 Bacteria 2802
107 Ga0439445_0005718 3300042004 Bacteria 2842
108 Ga0439448_0041352 3300042005 Unclassified 1491
109 Ga0439455_0000892 3300042012 Bacteria 4608
110 Ga0450912_000159 3300042116 Bacteria 2645
111 Ga0439458_0001807 3300042157 Bacteria 5318
112 Ga0450893_0019108 3300042532 Bacteria 1171
113 Ga0466967_0342435 3300045976 Bacteria 1446
114 Ga0495629_0261400 3300046459 Bacteria 1190
115 Ga0495582_0136559 3300046473 Bacteria 1388
116 Ga0495583_0000030 3300046506 Bacteria 254970
117 Ga0495606_0000406 3300046507 Bacteria 72668
118 Ga0495606_0024032 3300046507 Bacteria 4404
119 Ga0495665_0230961 3300046531 Bacteria 955
120 Ga0495621_0005587 3300046539 Bacteria 3624
121 Ga0495667_0006297 3300046559 Bacteria 8052
122 Ga0495657_0010171 3300046675 Bacteria 7086
123 Ga0495646_0193728 3300046680 Bacteria 1110
124 Ga0495658_0156173 3300046683 Bacteria 1404
125 Ga0495670_0014241 3300046691 Bacteria 3913
126 Ga0495671_0012244 3300046692 Bacteria 4689
127 Ga0495589_0060111 3300046794 Unclassified 1867
128 Ga0495604_0235695 3300047317 Bacteria 1254
129 Ga0495673_0007185 3300047469 Bacteria 6444
130 Ga0495602_0155535 3300048088 Bacteria 1791
131 Ga0496101_0227258 3300048904 Unclassified 1450
132 Ga0496102_0117159 3300048905 Bacteria 2486
133 Ga0496102_0181202 3300048905 Bacteria 1985
134 Ga0496108_0071663 3300048911 Bacteria 2924
135 Ga0496109_0046862 3300048912 Bacteria 3927
136 Ga0496109_0091526 3300048912 Bacteria 2813
137 Ga0496110_0049318 3300048913 Bacteria 3693
138 Ga0496111_0157257 3300048914 Bacteria 1687
139 Ga0496111_0338648 3300048914 Bacteria 1113
140 Ga0496112_0029694 3300048915 Bacteria 5289
141 Ga0496112_0180780 3300048915 Bacteria 2073
142 Ga0496113_0050321 3300048916 Bacteria 3106
143 Ga0496114_0061978 3300048917 Bacteria 3130
144 Ga0496117_0100522 3300048920 Bacteria 1831
145 Ga0496123_0027549 3300048926 Bacteria 4230
146 Ga0496124_0119899 3300048927 Bacteria 2104
147 Ga0496125_0001511 3300048928 Bacteria 33312
148 Ga0501034_0411334 3300049571 Bacteria 1275
149 Ga0501047_0065493 3300049581 Bacteria 3503
150 Ga0501070_0166106 3300049586 Bacteria 1819
151 Ga0501077_0126233 3300049593 Bacteria 1622
152 Ga0501044_0061778 3300049823 Bacteria 3832
153 nmdc:mga08y16_567191_c1 3300050511 Bacteria 1147
154 Ga0495595_0016746 3300053084 Bacteria 3142
155 Ga0495619_0053510 3300053085 Bacteria 2670
156 Ga0495619_0199356 3300053085 Bacteria 1385
157 Ga0500555_001516 3300053103 Bacteria 7032
158 2512736256 2512564039 Bacteria 8739048
159 2643950014 2643221588 Bacteria 3692460
160 2896089301 2896085136 Bacteria 6129793
161 2896111326 2896109856 Bacteria 7140722
162 2929180046 2929177148 Bacteria 7883697
163 2945982472 2945977869 Bacteria 7777518
164 2946018143 2946013367 Bacteria 7766675
165 JGI24740J21852_10025022
166 rootH2_10026205
167 rootH1_10065238
168 Ga0070658_10035139
169 Ga0070658_10326367
170 Ga0070683_100002175
171 Ga0070683_100012072
172 Ga0070690_100002895
173 Ga0070690_100184002
174 Ga0070670_100249479
175 Ga0068869_100176614
176 Ga0070666_10096475
177 Ga0070680_100357522
178 Ga0070682_100060763
179 Ga0068868_100000047
180 Ga0070660_100000540
181 Ga0070660_100003304
182 Ga0070661_100080491
183 Ga0070692_10073284
184 Ga0070669_100192068
185 Ga0070659_100000022
186 Ga0070659_100006780
187 Ga0070662_100028453
188 Ga0070681_10061008
189 Ga0070706_100159842
190 Ga0070698_100096497
191 Ga0070679_100055830
192 Ga0070679_100158772
193 Ga0070679_100159806
194 Ga0070684_100008785
195 Ga0070684_100060100
196 Ga0070684_100231640
197 Ga0068853_100023386
198 Ga0070693_100266660
199 Ga0068855_100297077
200 Ga0070664_100016443
201 Ga0068854_100020380
202 Ga0068856_100389823
203 Ga0068852_100192860
204 Ga0068860_100003973
205 Ga0068862_100000291
206 Ga0068862_100089515
207 Ga0081539_10000894
208 Ga0081539_10001239
209 Ga0097621_100057980
210 Ga0105245_10030408
211 Ga0105245_10111349
212 Ga0114129_10112305
213 Ga0105242_10229105
214 Ga0105246_10138340
215 Ga0157373_10013209
216 Ga0157371_10037519
217 Ga0157371_10207152
218 Ga0157370_10073225
219 Ga0157370_10140657
220 Ga0157369_10090239
221 Ga0157374_10039453
222 Ga0157378_10052980
223 Ga0157372_10103010
224 Ga0157372_10103206
225 Ga0157372_10321618
226 Ga0157375_10506203
227 Ga0157380_10277536
228 Ga0182008_10032378
229 Ga0182006_1011420
230 Ga0182007_10014374
231 Ga0209758_1008189
232 Ga0207710_10004697
233 Ga0207647_10141286
234 Ga0207645_10239386
235 Ga0207705_10123660
236 Ga0207684_10273155
237 Ga0207707_10274151
238 Ga0207660_10395238
239 Ga0207657_10004251
240 Ga0207657_10007324
241 Ga0207652_10030858
242 Ga0207650_10214884
243 Ga0207690_10000003
244 Ga0207706_10000817
245 Ga0207665_10071913
246 Ga0207691_10067504
247 Ga0207689_10062207
248 Ga0207661_10023165
249 Ga0207661_10038618
250 Ga0207661_10067623
251 Ga0207679_10053797
252 Ga0207667_10333444
253 Ga0207712_10000054
254 Ga0207640_10038315
255 Ga0207677_10000107
256 Ga0207639_10267463
257 Ga0207702_10034459
258 Ga0207648_10094705
259 Ga0207698_10346981
260 Ga0268266_10003524
261 Ga0268265_10000299
262 Ga0268264_10006025
263 Ga0307513_10091263
264 Ga0307416_100157318
265 Ga0307411_10156981
266 Ga0373926_0078571
267 Ga0373923_0011602
268 Ga0395900_0079697
269 Ga0395898_0010934
270 Ga0439431_0005484
271 Ga0439445_0005718
272 Ga0439448_0041352
273 Ga0439455_0000892
274 Ga0450912_000159
275 Ga0439458_0001807
276 Ga0450893_0019108
277 Ga0466967_0342435
278 Ga0495629_0261400
279 Ga0495582_0136559
280 Ga0495583_0000030
281 Ga0495606_0000406
282 Ga0495606_0024032
283 Ga0495665_0230961
284 Ga0495621_0005587
285 Ga0495667_0006297
286 Ga0495657_0010171
287 Ga0495646_0193728
288 Ga0495658_0156173
289 Ga0495670_0014241
290 Ga0495671_0012244
291 Ga0495589_0060111
292 Ga0495604_0235695
293 Ga0495673_0007185
294 Ga0495602_0155535
295 Ga0496101_0227258
296 Ga0496102_0117159
297 Ga0496102_0181202
298 Ga0496108_0071663
299 Ga0496109_0046862
300 Ga0496109_0091526
301 Ga0496110_0049318
302 Ga0496111_0157257
303 Ga0496111_0338648
304 Ga0496112_0029694
305 Ga0496112_0180780
306 Ga0496113_0050321
307 Ga0496114_0061978
308 Ga0496117_0100522
309 Ga0496123_0027549
310 Ga0496124_0119899
311 Ga0496125_0001511
312 Ga0501034_0411334
313 Ga0501047_0065493
314 Ga0501070_0166106
315 Ga0501077_0126233
316 Ga0501044_0061778
317 nmdc:mga08y16_567191_c1
318 Ga0495595_0016746
319 Ga0495619_0053510
320 Ga0495619_0199356
321 Ga0500555_001516
322 2512736256
323 2643950014
324 2896089301
325 2896111326
326 2929180046
327 2945982472
328 2946018143

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

155

307

0.9

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

164

298

0.88

PF13524

Glyco_trans_1_2

Glycosyl transferases group 1

174

326

0.82

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

17

156

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
7fg9-assembly1.cif.gz_B-2 alpha-1,2-glucosyltransferase_udp_tll1591 0.8578 1 336
7fg9-assembly1.cif.gz_B-2 alpha-1,2-glucosyltransferase_udp_tll1591 0.8555 1 336
2f9f-assembly1.cif.gz_A crystal structure of the putative mannosyl transferase (wbaz-1)from archaeoglobus fulgidus, northeast structural genomics target gr29a. 0.8392 156 315
5i45-assembly1.cif.gz_A 1.35 angstrom crystal structure of c-terminal domain of glycosyl transferase group 1 family protein (lpcc) from francisella tularensis. 0.8367 155 319
6tpk-assembly1.cif.gz_A crystal structure of the human oxytocin receptor 0.8114 166 316
ID Description Score Start End Superfamily
2iv3B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8662 155 318 3.40.50.2000
2f9fA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8513 156 315 3.40.50.2000
af_F4IBV4_205_380_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8481 164 317 3.40.50.2000
3c4vA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.848 168 312 3.40.50.2000
af_Q2G0L3_321_481_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.837 173 315 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A2S8MDS1-F1-model_v4 deleted 0.9927 5 109
AF-A0A522R2Z3-F1-model_v4 Glycosyltransferase family 4 protein 0.9909 1 148 GO:0016740
AF-A0A4Q3T4Z5-F1-model_v4 deleted 0.987 1 129
AF-A0A522R2Z3-F1-model_v4 Glycosyltransferase family 4 protein 0.9843 1 148 GO:0016740
AF-A0A3S1UJB6-F1-model_v4 deleted 0.9818 170 334

Map