F243797

General Info

Members Datasets Scaffolds Average Seq Length
164 104 164 244

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10028334|Ga0114129_100283343
Length 274
Sequence VPEGSGGGLDPRLFAANPARDPRFRVKDRWIECASFPPDDPRRAVEFLHRQMNEEINGLEASAQSLCDFPETDWDIRMCLARQCSDEARHVVMFRRLLEQRGGHVGQYPVLNFQYRIIARIGTLVGRLNIQNRSFEAGGIDAIQSGMEDARDEGDHELAALFEMQLADEIQHVRFANEAIRALTKREPRSLLHMGAALTAAEEAFTQVMGSEGMGGARRPVALQARSEAGFTAREIKMAGDLASAIGVAGHPPVDTSGEPRSAGGRGLSGEPPA

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
82 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
83 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
84 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
89 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
90 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
91 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
92 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
93 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
96 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
97 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
98 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
99 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
100 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
102 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
103 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
104 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.83
Nodule 0
Rhizoplane 2.44
Rhizosphere 94.51
Stem 0
Stem Tuber 0
Unclassified 1.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100118752 3300005334 Bacteria 2020
2 Ga0070666_10000244 3300005335 Bacteria 37023
3 Ga0070689_100001108 3300005340 Bacteria 16948
4 Ga0070689_100060033 3300005340 Bacteria 2956
5 Ga0070668_100442145 3300005347 Unclassified 1116
6 Ga0070669_100360734 3300005353 Bacteria 1182
7 Ga0070671_100004332 3300005355 Bacteria 11227
8 Ga0070674_100004581 3300005356 Bacteria 7896
9 Ga0070688_100131343 3300005365 Bacteria 1690
10 Ga0070708_100020981 3300005445 Bacteria 5516
11 Ga0070708_100030354 3300005445 Bacteria 4672
12 Ga0070708_100092601 3300005445 Bacteria 2754
13 Ga0070662_100371599 3300005457 Unclassified 1175
14 Ga0070706_100002452 3300005467 Bacteria 18703
15 Ga0070706_100017224 3300005467 Bacteria 6672
16 Ga0070707_100002541 3300005468 Bacteria 17348
17 Ga0070698_100000781 3300005471 Bacteria 34509
18 Ga0070698_100000988 3300005471 Bacteria 31288
19 Ga0070698_100008202 3300005471 Bacteria 11298
20 Ga0070699_100004977 3300005518 Bacteria 11715
21 Ga0070699_100531894 3300005518 Bacteria 1069
22 Ga0070697_100031333 3300005536 Bacteria 4277
23 Ga0068853_100187489 3300005539 Bacteria 1878
24 Ga0070672_100328366 3300005543 Bacteria 1301
25 Ga0070704_100023576 3300005549 Bacteria 4024
26 Ga0068855_100019370 3300005563 Bacteria 8177
27 Ga0070664_100254835 3300005564 Bacteria 1578
28 Ga0070664_100310295 3300005564 Bacteria 1427
29 Ga0070702_100284642 3300005615 Bacteria 1136
30 Ga0070702_100394344 3300005615 Bacteria 988
31 Ga0068859_100001801 3300005617 Bacteria 21810
32 Ga0068859_100240601 3300005617 Unclassified 1899
33 Ga0068864_100164785 3300005618 Bacteria 2017
34 Ga0068866_10011863 3300005718 Bacteria 3785
35 Ga0068870_10004077 3300005840 Bacteria 6248
36 Ga0068858_100283426 3300005842 Unclassified 1578
37 Ga0068860_100210562 3300005843 Bacteria 1886
38 Ga0068862_100021650 3300005844 Bacteria 5375
39 Ga0081455_10002451 3300005937 Bacteria 22094
40 Ga0075365_10091888 3300006038 Bacteria 2069
41 Ga0097621_100052790 3300006237 Bacteria 3312
42 Ga0075428_100012433 3300006844 Bacteria 9468
43 Ga0075428_100070401 3300006844 Unclassified 3824
44 Ga0075428_100117943 3300006844 Unclassified 2891
45 Ga0075430_100005003 3300006846 Bacteria 11158
46 Ga0075430_100014039 3300006846 Bacteria 6830
47 Ga0075430_100419819 3300006846 Bacteria 1104
48 Ga0075431_100144526 3300006847 Bacteria 2451
49 Ga0075431_100629880 3300006847 Bacteria 1054
50 Ga0075433_10294005 3300006852 Unclassified 1438
51 Ga0075434_100044612 3300006871 Bacteria 4397
52 Ga0075434_100059573 3300006871 Unclassified 3796
53 Ga0075434_100363863 3300006871 Bacteria 1467
54 Ga0075429_100000140 3300006880 Bacteria 43866
55 Ga0075429_100001440 3300006880 Bacteria 19539
56 Ga0075429_100104928 3300006880 Bacteria 2469
57 Ga0075429_100241578 3300006880 Bacteria 1582
58 Ga0075429_100323300 3300006880 Bacteria 1350
59 Ga0068865_100008118 3300006881 Bacteria 6479
60 Ga0097620_100001801 3300006931 Bacteria 21810
61 Ga0097620_100240593 3300006931 Unclassified 1899
62 Ga0075435_100017524 3300007076 Bacteria 5425
63 Ga0075435_100158930 3300007076 Bacteria 1903
64 Ga0075435_100178820 3300007076 Bacteria 1792
65 Ga0111539_10016589 3300009094 Bacteria 9131
66 Ga0111539_10026403 3300009094 Bacteria 7101
67 Ga0111539_10199524 3300009094 Unclassified 2333
68 Ga0105245_10000284 3300009098 Bacteria 48293
69 Ga0105245_10389405 3300009098 Bacteria 1390
70 Ga0105247_10380258 3300009101 Unclassified 1001
71 Ga0114129_10000653 3300009147 Bacteria 43356
72 Ga0114129_10028334 3300009147 Bacteria 7936
73 Ga0114129_10055966 3300009147 Bacteria 5527
74 Ga0114129_10238861 3300009147 Bacteria 2443
75 Ga0114129_10546760 3300009147 Bacteria 1506
76 Ga0114129_10827915 3300009147 Unclassified 1178
77 Ga0105248_10001029 3300009177 Bacteria 30871
78 Ga0157373_10374604 3300013100 Unclassified 1018
79 Ga0157378_10002837 3300013297 Bacteria 15439
80 Ga0163162_10007617 3300013306 Bacteria 10542
81 Ga0157379_10319706 3300014968 Unclassified 1417
82 Ga0157376_10168979 3300014969 Unclassified 1989
83 Ga0163161_10032082 3300017792 Bacteria 3748
84 Ga0213876_10288453 3300021384 Unclassified 872
85 Ga0207710_10118822 3300025900 Unclassified 1261
86 Ga0207680_10000649 3300025903 Bacteria 16395
87 Ga0207643_10018855 3300025908 Bacteria 3779
88 Ga0207643_10178196 3300025908 Unclassified 1285
89 Ga0207684_10002066 3300025910 Bacteria 20659
90 Ga0207684_10009213 3300025910 Bacteria 8726
91 Ga0207646_10003360 3300025922 Bacteria 18130
92 Ga0207687_10002030 3300025927 Bacteria 13890
93 Ga0207687_10257266 3300025927 Bacteria 1390
94 Ga0207706_10522485 3300025933 Unclassified 1023
95 Ga0207670_10003444 3300025936 Bacteria 8391
96 Ga0207670_10023689 3300025936 Bacteria 3825
97 Ga0207670_10396630 3300025936 Bacteria 1102
98 Ga0207691_10189126 3300025940 Bacteria 1796
99 Ga0207689_10080699 3300025942 Bacteria 2674
100 Ga0207679_10347053 3300025945 Bacteria 1292
101 Ga0207667_10195004 3300025949 Bacteria 2078
102 Ga0207708_10140101 3300026075 Bacteria 1896
103 Ga0207641_10215147 3300026088 Unclassified 1779
104 Ga0207648_10036420 3300026089 Bacteria 4334
105 Ga0207676_10136735 3300026095 Unclassified 2092
106 Ga0207675_100160464 3300026118 Bacteria 2144
107 Ga0207675_100456780 3300026118 Unclassified 1266
108 Ga0207683_10210038 3300026121 Bacteria 1771
109 Ga0207698_10566640 3300026142 Bacteria 1115
110 Ga0268265_10025940 3300028380 Bacteria 4166
111 Ga0268264_10091234 3300028381 Bacteria 2628
112 Ga0268264_10283557 3300028381 Bacteria 1553
113 Ga0307408_100204595 3300031548 Bacteria 1600
114 Ga0307413_10217470 3300031824 Bacteria 1393
115 Ga0307416_100080015 3300032002 Bacteria 2756
116 Ga0307416_100143357 3300032002 Bacteria 2176
117 Ga0307411_10170874 3300032005 Bacteria 1639
118 Ga0316574_0114418 3300035398 Bacteria 1730
119 Ga0436365_0090386 3300039437 Unclassified 1322
120 Ga0451576_0003343 3300045051 Bacteria 22223
121 Ga0451576_0023477 3300045051 Bacteria 6677
122 Ga0451576_0268577 3300045051 Unclassified 1783
123 Ga0451576_0283962 3300045051 Bacteria 1731
124 Ga0495580_0128070 3300046472 Bacteria 1762
125 Ga0495586_0121275 3300046535 Unclassified 1461
126 Ga0495621_0072530 3300046539 Bacteria 1271
127 Ga0496103_0416751 3300048906 Bacteria 862
128 Ga0496104_0063712 3300048907 Unclassified 3497
129 Ga0496108_0191337 3300048911 Unclassified 1773
130 Ga0496112_0040805 3300048915 Bacteria 4538
131 Ga0501294_003316 3300049517 Bacteria 1520
132 Ga0501075_0211823 3300049591 Bacteria 1478
133 Ga0501076_0206672 3300049592 Unclassified 1604
134 Ga0501249_005247 3300049679 Bacteria 2649
135 Ga0501081_0181754 3300049743 Bacteria 1521
136 nmdc:mga0yw44_217155_c1 3300050492 Bacteria 1266
137 nmdc:mga05p37_399009_c1 3300050507 Bacteria 1606
138 nmdc:mga05p37_483_c1 3300050507 Bacteria 43552
139 nmdc:mga05p37_597634_c1 3300050507 Bacteria 1246
140 nmdc:mga05p37_87622_c1 3300050507 Bacteria 3837
141 nmdc:mga09592_1374_c1 3300050508 Bacteria 19482
142 nmdc:mga09592_190_c1 3300050508 Bacteria 43956
143 nmdc:mga09592_27699_c1 3300050508 Bacteria 4704
144 nmdc:mga09592_2786_c1 3300050508 Bacteria 14162
145 nmdc:mga09592_376476_c1 3300050508 Bacteria 1228
146 nmdc:mga09592_386949_c1 3300050508 Bacteria 1209
147 nmdc:mga0qj67_30018_c1 3300050509 Unclassified 4227
148 nmdc:mga0qj67_7514_c1 3300050509 Bacteria 8051
149 nmdc:mga06r32_1405936_c1 3300050510 Unclassified 639
150 nmdc:mga06r32_44670_c1 3300050510 Unclassified 4219
151 nmdc:mga06r32_584171_c1 3300050510 Bacteria 1089
152 nmdc:mga08y16_162213_c1 3300050511 Unclassified 2323
153 nmdc:mga08y16_173669_c1 3300050511 Bacteria 2238
154 nmdc:mga08y16_202973_c1 3300050511 Unclassified 2054
155 nmdc:mga0n895_38227_c1 3300050512 Bacteria 4649
156 nmdc:mga0n895_61658_c1 3300050512 Bacteria 3704
157 nmdc:mga0rr50_252535_c1 3300050513 Bacteria 1465
158 nmdc:mga0rr50_444776_c1 3300050513 Bacteria 1098
159 nmdc:mga0a205_132518_c1 3300050515 Bacteria 2393
160 nmdc:mga0a205_347958_c1 3300050515 Bacteria 1350
161 Ga0500616_0000588 3300053153 Bacteria 44217
162 Ga0501082_0358943 3300060353 Unclassified 1271
163 Ga0501082_1392268 3300060353 Bacteria 612
164 Ga0530510_0454957 3300061734 Bacteria 968

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050508 nmdc:mga09592_376476_c1 nmdc:mga09592_376476_c1_23_649 191
2 3300050507 nmdc:mga05p37_399009_c1 nmdc:mga05p37_399009_c1_112_783 192
3 3300050510 nmdc:mga06r32_1405936_c1 nmdc:mga06r32_1405936_c1_15_596 193
4 3300060353 Ga0501082_1392268 Ga0501082_1392268_16_597 193
5 3300048906 Ga0496103_0416751 Ga0496103_0416751_141_845 216
6 3300045051 Ga0451576_0003343 Ga0451576_0003343_12950_13645 218
7 3300021384 Ga0213876_10288453 Ga0213876_102884531 227
8 3300039437 Ga0436365_0090386 Ga0436365_0090386_173_859 227
9 3300006844 Ga0075428_100117943 Ga0075428_1001179432 229
10 3300006846 Ga0075430_100014039 Ga0075430_1000140394 229
11 3300006880 Ga0075429_100241578 Ga0075429_1002415782 229
12 3300050509 nmdc:mga0qj67_30018_c1 nmdc:mga0qj67_30018_c1_3267_4013 229
13 3300005937 Ga0081455_10002451 Ga0081455_100024518 231
14 3300009147 Ga0114129_10546760 Ga0114129_105467602 231
15 3300013100 Ga0157373_10374604 Ga0157373_103746042 231
16 3300050507 nmdc:mga05p37_597634_c1 nmdc:mga05p37_597634_c1_450_1196 231
17 3300025936 Ga0207670_10396630 Ga0207670_103966302 232
18 3300005457 Ga0070662_100371599 Ga0070662_1003715992 233
19 3300005615 Ga0070702_100284642 Ga0070702_1002846421 234
20 3300009098 Ga0105245_10000284 Ga0105245_1000028415 234
21 3300009098 Ga0105245_10389405 Ga0105245_103894052 234
22 3300013306 Ga0163162_10007617 Ga0163162_100076175 234
23 3300025927 Ga0207687_10002030 Ga0207687_1000203019 234
24 3300025927 Ga0207687_10257266 Ga0207687_102572662 234
25 3300005549 Ga0070704_100023576 Ga0070704_1000235763 235
26 3300005840 Ga0068870_10004077 Ga0068870_100040777 235
27 3300006871 Ga0075434_100059573 Ga0075434_1000595737 235
28 3300006871 Ga0075434_100363863 Ga0075434_1003638631 235
29 3300007076 Ga0075435_100178820 Ga0075435_1001788202 235
30 3300025908 Ga0207643_10018855 Ga0207643_100188552 235
31 3300032002 Ga0307416_100080015 Ga0307416_1000800154 235
32 3300045051 Ga0451576_0023477 Ga0451576_0023477_2227_2970 235
33 3300045051 Ga0451576_0268577 Ga0451576_0268577_266_1003 235
34 3300045051 Ga0451576_0283962 Ga0451576_0283962_38_766 235
35 3300049517 Ga0501294_003316 Ga0501294_003316_601_1368 235
36 3300050512 nmdc:mga0n895_61658_c1 nmdc:mga0n895_61658_c1_1933_2676 235
37 3300050513 nmdc:mga0rr50_444776_c1 nmdc:mga0rr50_444776_c1_148_891 235
38 3300005355 Ga0070671_100004332 Ga0070671_1000043328 236
39 3300005445 Ga0070708_100020981 Ga0070708_1000209812 236
40 3300009177 Ga0105248_10001029 Ga0105248_100010297 236
41 3300026088 Ga0207641_10215147 Ga0207641_102151472 236
42 3300026095 Ga0207676_10136735 Ga0207676_101367352 236
43 3300048907 Ga0496104_0063712 Ga0496104_0063712_1783_2547 236
44 3300048911 Ga0496108_0191337 Ga0496108_0191337_53_817 236
45 3300048915 Ga0496112_0040805 Ga0496112_0040805_1013_1777 236
46 3300053153 Ga0500616_0000588 Ga0500616_0000588_26515_27243 236
47 3300005340 Ga0070689_100001108 Ga0070689_1000011088 237
48 3300005347 Ga0070668_100442145 Ga0070668_1004421451 237
49 3300005353 Ga0070669_100360734 Ga0070669_1003607342 237
50 3300005356 Ga0070674_100004581 Ga0070674_10000458111 237
51 3300005445 Ga0070708_100030354 Ga0070708_1000303544 237
52 3300005445 Ga0070708_100092601 Ga0070708_1000926012 237
53 3300005467 Ga0070706_100017224 Ga0070706_1000172247 237
54 3300005468 Ga0070707_100002541 Ga0070707_10000254111 237
55 3300005471 Ga0070698_100008202 Ga0070698_1000082029 237
56 3300005518 Ga0070699_100004977 Ga0070699_1000049779 237
57 3300005539 Ga0068853_100187489 Ga0068853_1001874893 237
58 3300005564 Ga0070664_100310295 Ga0070664_1003102952 237
59 3300005617 Ga0068859_100240601 Ga0068859_1002406012 237
60 3300005718 Ga0068866_10011863 Ga0068866_100118632 237
61 3300005842 Ga0068858_100283426 Ga0068858_1002834262 237
62 3300005844 Ga0068862_100021650 Ga0068862_1000216504 237
63 3300006237 Ga0097621_100052790 Ga0097621_1000527905 237
64 3300006844 Ga0075428_100070401 Ga0075428_1000704013 237
65 3300006846 Ga0075430_100005003 Ga0075430_10000500310 237
66 3300006847 Ga0075431_100144526 Ga0075431_1001445262 237
67 3300006847 Ga0075431_100629880 Ga0075431_1006298801 237
68 3300006880 Ga0075429_100000140 Ga0075429_10000014012 237
69 3300006880 Ga0075429_100001440 Ga0075429_10000144010 237
70 3300006881 Ga0068865_100008118 Ga0068865_1000081182 237
71 3300006931 Ga0097620_100240593 Ga0097620_1002405932 237
72 3300007076 Ga0075435_100158930 Ga0075435_1001589302 237
73 3300009094 Ga0111539_10199524 Ga0111539_101995243 237
74 3300009101 Ga0105247_10380258 Ga0105247_103802582 237
75 3300009147 Ga0114129_10000653 Ga0114129_1000065334 237
76 3300009147 Ga0114129_10028334 Ga0114129_100283343 237
77 3300013297 Ga0157378_10002837 Ga0157378_100028377 237
78 3300014968 Ga0157379_10319706 Ga0157379_103197062 237
79 3300014969 Ga0157376_10168979 Ga0157376_101689793 237
80 3300017792 Ga0163161_10032082 Ga0163161_100320826 237
81 3300025900 Ga0207710_10118822 Ga0207710_101188222 237
82 3300025910 Ga0207684_10009213 Ga0207684_1000921310 237
83 3300025922 Ga0207646_10003360 Ga0207646_1000336011 237
84 3300025933 Ga0207706_10522485 Ga0207706_105224851 237
85 3300025936 Ga0207670_10003444 Ga0207670_100034448 237
86 3300025940 Ga0207691_10189126 Ga0207691_101891262 237
87 3300026075 Ga0207708_10140101 Ga0207708_101401012 237
88 3300026089 Ga0207648_10036420 Ga0207648_100364206 237
89 3300026118 Ga0207675_100160464 Ga0207675_1001604643 237
90 3300026121 Ga0207683_10210038 Ga0207683_102100382 237
91 3300026142 Ga0207698_10566640 Ga0207698_105666402 237
92 3300028380 Ga0268265_10025940 Ga0268265_100259404 237
93 3300028381 Ga0268264_10283557 Ga0268264_102835571 237
94 3300031548 Ga0307408_100204595 Ga0307408_1002045952 237
95 3300031824 Ga0307413_10217470 Ga0307413_102174702 237
96 3300032002 Ga0307416_100143357 Ga0307416_1001433572 237
97 3300032005 Ga0307411_10170874 Ga0307411_101708742 237
98 3300035398 Ga0316574_0114418 Ga0316574_0114418_571_1359 237
99 3300046472 Ga0495580_0128070 Ga0495580_0128070_877_1602 237
100 3300046535 Ga0495586_0121275 Ga0495586_0121275_326_1102 237
101 3300046539 Ga0495621_0072530 Ga0495621_0072530_73_798 237
102 3300049591 Ga0501075_0211823 Ga0501075_0211823_364_1158 237
103 3300049592 Ga0501076_0206672 Ga0501076_0206672_749_1543 237
104 3300049679 Ga0501249_005247 Ga0501249_005247_1522_2313 237
105 3300049743 Ga0501081_0181754 Ga0501081_0181754_181_975 237
106 3300050507 nmdc:mga05p37_483_c1 nmdc:mga05p37_483_c1_10797_11564 237
107 3300050508 nmdc:mga09592_1374_c1 nmdc:mga09592_1374_c1_8202_8972 237
108 3300050508 nmdc:mga09592_190_c1 nmdc:mga09592_190_c1_31785_32552 237
109 3300050508 nmdc:mga09592_27699_c1 nmdc:mga09592_27699_c1_1625_2410 237
110 3300050509 nmdc:mga0qj67_7514_c1 nmdc:mga0qj67_7514_c1_6326_7096 237
111 3300050510 nmdc:mga06r32_44670_c1 nmdc:mga06r32_44670_c1_2077_2844 237
112 3300050510 nmdc:mga06r32_584171_c1 nmdc:mga06r32_584171_c1_55_840 237
113 3300050511 nmdc:mga08y16_202973_c1 nmdc:mga08y16_202973_c1_932_1732 237
114 3300050513 nmdc:mga0rr50_252535_c1 nmdc:mga0rr50_252535_c1_368_1093 237
115 3300050515 nmdc:mga0a205_347958_c1 nmdc:mga0a205_347958_c1_483_1208 237
116 3300060353 Ga0501082_0358943 Ga0501082_0358943_407_1201 237
117 3300005334 Ga0068869_100118752 Ga0068869_1001187522 238
118 3300005335 Ga0070666_10000244 Ga0070666_1000024420 238
119 3300005340 Ga0070689_100060033 Ga0070689_1000600333 238
120 3300005365 Ga0070688_100131343 Ga0070688_1001313432 238
121 3300005467 Ga0070706_100002452 Ga0070706_10000245216 238
122 3300005471 Ga0070698_100000781 Ga0070698_1000007818 238
123 3300005471 Ga0070698_100000988 Ga0070698_10000098822 238
124 3300005518 Ga0070699_100531894 Ga0070699_1005318942 238
125 3300005536 Ga0070697_100031333 Ga0070697_1000313333 238
126 3300005543 Ga0070672_100328366 Ga0070672_1003283661 238
127 3300005563 Ga0068855_100019370 Ga0068855_1000193707 238
128 3300005564 Ga0070664_100254835 Ga0070664_1002548352 238
129 3300005615 Ga0070702_100394344 Ga0070702_1003943442 238
130 3300005617 Ga0068859_100001801 Ga0068859_10000180120 238
131 3300005618 Ga0068864_100164785 Ga0068864_1001647852 238
132 3300005843 Ga0068860_100210562 Ga0068860_1002105622 238
133 3300006038 Ga0075365_10091888 Ga0075365_100918882 238
134 3300006844 Ga0075428_100012433 Ga0075428_10001243311 238
135 3300006846 Ga0075430_100419819 Ga0075430_1004198192 238
136 3300006852 Ga0075433_10294005 Ga0075433_102940052 238
137 3300006871 Ga0075434_100044612 Ga0075434_1000446122 238
138 3300006880 Ga0075429_100104928 Ga0075429_1001049282 238
139 3300006880 Ga0075429_100323300 Ga0075429_1003233002 238
140 3300006931 Ga0097620_100001801 Ga0097620_10000180120 238
141 3300007076 Ga0075435_100017524 Ga0075435_1000175244 238
142 3300009094 Ga0111539_10016589 Ga0111539_100165892 238
143 3300009094 Ga0111539_10026403 Ga0111539_100264035 238
144 3300009147 Ga0114129_10055966 Ga0114129_100559665 238
145 3300009147 Ga0114129_10238861 Ga0114129_102388613 238
146 3300009147 Ga0114129_10827915 Ga0114129_108279152 238
147 3300025903 Ga0207680_10000649 Ga0207680_100006498 238
148 3300025908 Ga0207643_10178196 Ga0207643_101781962 238
149 3300025910 Ga0207684_10002066 Ga0207684_1000206616 238
150 3300025936 Ga0207670_10023689 Ga0207670_100236894 238
151 3300025942 Ga0207689_10080699 Ga0207689_100806992 238
152 3300025945 Ga0207679_10347053 Ga0207679_103470531 238
153 3300025949 Ga0207667_10195004 Ga0207667_101950043 238
154 3300026118 Ga0207675_100456780 Ga0207675_1004567801 238
155 3300028381 Ga0268264_10091234 Ga0268264_100912342 238
156 3300050492 nmdc:mga0yw44_217155_c1 nmdc:mga0yw44_217155_c1_199_930 238
157 3300050507 nmdc:mga05p37_87622_c1 nmdc:mga05p37_87622_c1_2231_2950 238
158 3300050508 nmdc:mga09592_2786_c1 nmdc:mga09592_2786_c1_2388_3104 238
159 3300050508 nmdc:mga09592_386949_c1 nmdc:mga09592_386949_c1_229_951 238
160 3300050511 nmdc:mga08y16_162213_c1 nmdc:mga08y16_162213_c1_79_795 238
161 3300050511 nmdc:mga08y16_173669_c1 nmdc:mga08y16_173669_c1_357_1079 238
162 3300050512 nmdc:mga0n895_38227_c1 nmdc:mga0n895_38227_c1_3076_3792 238
163 3300050515 nmdc:mga0a205_132518_c1 nmdc:mga0a205_132518_c1_1496_2212 238
164 3300061734 Ga0530510_0454957 Ga0530510_0454957_156_875 238

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04305

DUF455

Protein of unknown function (DUF455)

10

237

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4abm-assembly1.cif.gz_A crystal structure of chmp4b hairpin 0.9028 35 96
4nkg-assembly2.cif.gz_D crystal structure of ssph1 lrr domain in complex pkn1 hr1b domain 0.901 38 94
6sv1-assembly1.cif.gz_G crystal structure of rhodospirillum rubrum rru_a0973 e34a variant 0.8646 29 95
6sv1-assembly1.cif.gz_F crystal structure of rhodospirillum rubrum rru_a0973 e34a variant 0.8634 29 95
3hiu-assembly1.cif.gz_A the crystal structure of protein (xcc3681) from xanthomonas campestris pv. campestris str. atcc 33913 0.8617 35 178
ID Description Score Start End Superfamily
af_Q4VBS0_2_105_6.10.140.1740 Special;Helix non-globular;Helix Hairpins; 0.9235 35 96 6.10.140.1740
4abmA00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;ESAT-6-like 0.9028 35 96 1.10.287.1060
af_B4FIR6_31_254_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.8601 2 180 1.20.1260.10
4u7nA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.8197 40 96 1.10.287.130
1ivsB05 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Valyl-tRNA synthetase, C-terminal domain 0.8074 30 93 1.10.287.380
ID Description Score Start End GO Terms
AF-A0A2V7YNT4-F1-model_v4 Ferritin-like domain-containing protein 0.9895 4 238
AF-A0A2V7YNT4-F1-model_v4 Ferritin-like domain-containing protein 0.9854 4 238
AF-A0A1P8FEF7-F1-model_v4 DUF455 domain-containing protein 0.9804 1 237
AF-A0A524HNG3-F1-model_v4 DUF455 family protein 0.9797 1 237
AF-A0A534AVR2-F1-model_v4 Ferritin-like domain-containing protein 0.9745 8 181

Feature Viewer

pLDDT pTM Quality
94.27 0.9 High
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Predicted Structure (AlphaFold2)

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