F242150

General Info

Members Datasets Scaffolds Average Seq Length
163 103 326 291

Family's Representative Sequence

Representative Sequence 3300041406|Ga0439439_0000733|Ga0439439_0000733_479_1423
Length 314
Sequence LAVEEGRRRRHLLIYEEGGVTMVQDKSIGSRIFNVVNYSLLLIIALVTFLPFVHVIAGSFTTAGELAAKQMVLIPTTWSLEAYRYIFSTNTVFTGLVTSIGVTVGGTLFSMFLTALMAYGLSRRDLTGRRAIMFMVVFTMLFSGGIIPTFLVVKAMGLIDSYAAMVVPTAINAFNLIIMRNFFQNLPDGLEESAKIDGASDWGILFRIVIPLSMPAIATISLFYAVTYWNTYMTAILYLTDAGKWPVQVILRQIVVLSSGLAADTSGMDDFASRPPEQTVKMAVIVVATLPILLVYPFLQKHFAKGALLGSIKG

Samples

Sample ID Description Type Environment
1 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
2 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
3 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
4 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
7 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
8 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
9 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
10 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
11 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
12 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
13 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
14 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
15 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
16 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
17 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
18 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
19 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
20 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
21 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
22 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
23 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
24 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
25 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
26 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
27 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
28 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
29 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
30 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
31 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
32 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
33 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
34 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
35 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
36 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
37 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
38 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
39 2554235283 Bacillus safensis VK Isolate Rhizosphere
40 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
41 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
42 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
43 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
44 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
45 2643221735 Bacillus sp. Root920 Isolate Unclassified
46 2671180694 Paenibacillus sp. A3 Isolate Unclassified
47 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
48 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
49 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
50 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
51 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
52 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
53 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
54 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
55 2811994870 Bacillus sp. JB4 Isolate Unclassified
56 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
57 2818991459 Paenibacillus sp. 597 Isolate Unclassified
58 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
59 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
60 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
61 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
62 2857472729 Cohnella sp. R-74144 Isolate Unclassified
63 2860837431 Bacillus sp. WR11 Isolate Unclassified
64 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
65 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
66 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
67 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
68 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
69 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
70 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
71 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
72 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
73 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
74 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
75 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
76 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
77 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
78 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
79 2919726948 Bacillus pumilus 4489 Isolate Unclassified
80 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
81 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
82 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
83 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
84 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
85 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
86 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
87 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
88 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
89 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
90 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
91 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
92 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
93 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
94 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
95 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
96 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
97 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
98 8022653035 Bacillus sp. Rc4 Isolate Unclassified
99 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
100 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
101 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
102 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
103 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 38.04
Metatranscriptomes 2.45
Isolates 59.51

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.2
Nodule 1.23
Rhizoplane 1.84
Rhizosphere 42.33
Stem 0
Stem Tuber 0
Unclassified 0.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439439_0000733 3300041406 Bacteria 5885
2 Ga0055538_1000428 3300003751 Bacteria 16275
3 Ga0055538_1000473 3300003751 Bacteria 14833
4 Ga0055541_1006572 3300003841 Bacteria 1963
5 Ga0055541_1013123 3300003841 Bacteria 1169
6 Ga0058862_11417021 3300004803 Bacteria 1171
7 Ga0070706_100562073 3300005467 Unclassified 1061
8 Ga0105251_10020790 3300009011 Bacteria 3442
9 Ga0105244_10025010 3300009036 Bacteria 3251
10 Ga0206351_10279016 3300020077 Bacteria 3440
11 Ga0206350_10725850 3300020080 Bacteria 1425
12 Ga0224712_10006127 3300022467 Bacteria 3402
13 Ga0209784_100278 3300025224 Bacteria 29264
14 Ga0209784_100476 3300025224 Bacteria 16386
15 Ga0209566_100022 3300025225 Bacteria 403259
16 Ga0209566_100108 3300025225 Bacteria 119382
17 Ga0209566_100120 3300025225 Bacteria 105111
18 Ga0209566_101039 3300025225 Bacteria 11557
19 Ga0209147_110653 3300025229 Bacteria 1046
20 Ga0209437_100325 3300025233 Bacteria 60773
21 Ga0209025_1000001 3300025294 Bacteria 1888151
22 Ga0209025_1009322 3300025294 Bacteria 6868
23 Ga0209025_1031934 3300025294 Bacteria 2475
24 Ga0395899_0037259 3300037312 Bacteria 3646
25 Ga0395899_0100011 3300037312 Bacteria 2094
26 Ga0439436_0000597 3300041404 Bacteria 9580
27 Ga0439436_0000916 3300041404 Bacteria 8093
28 Ga0439439_0003929 3300041406 Bacteria 3312
29 Ga0439433_0002685 3300041999 Bacteria 3782
30 Ga0439433_0004906 3300041999 Bacteria 2875
31 Ga0439449_0000426 3300042007 Bacteria 15576
32 Ga0439449_0000707 3300042007 Bacteria 12758
33 Ga0439462_0000130 3300042015 Bacteria 11929
34 Ga0439462_0001849 3300042015 Bacteria 4802
35 Ga0496115_0000271 3300048918 Bacteria 45546
36 Ga0496115_0000278 3300048918 Bacteria 44969
37 Ga0496116_0003884 3300048919 Bacteria 14563
38 Ga0496116_0031864 3300048919 Bacteria 3766
39 Ga0496116_0087265 3300048919 Bacteria 1910
40 Ga0496116_0100155 3300048919 Bacteria 1734
41 Ga0496116_0147952 3300048919 Bacteria 1310
42 Ga0496117_0010161 3300048920 Bacteria 8637
43 Ga0496117_0028847 3300048920 Bacteria 4290
44 Ga0496118_0147422 3300048921 Bacteria 1479
45 Ga0496119_0007769 3300048922 Bacteria 9561
46 Ga0496119_0023373 3300048922 Bacteria 4386
47 Ga0496120_0000552 3300048923 Bacteria 57133
48 Ga0496120_0044008 3300048923 Bacteria 2596
49 Ga0496121_0017773 3300048924 Bacteria 7229
50 Ga0496121_0088833 3300048924 Bacteria 2421
51 Ga0496121_0116579 3300048924 Bacteria 2026
52 Ga0496121_0152309 3300048924 Bacteria 1700
53 Ga0496122_0028649 3300048925 Bacteria 4719
54 Ga0496122_0052310 3300048925 Bacteria 3093
55 Ga0496122_0063486 3300048925 Bacteria 2695
56 Ga0496122_0079897 3300048925 Bacteria 2283
57 Ga0496122_0210460 3300048925 Bacteria 1127
58 Ga0496123_0082188 3300048926 Bacteria 1954
59 Ga0496124_0000335 3300048927 Bacteria 86882
60 Ga0496125_0007091 3300048928 Bacteria 11966
61 Ga0496125_0073482 3300048928 Bacteria 2658
62 Ga0496126_0001202 3300048929 Bacteria 42234
63 Ga0496126_0002887 3300048929 Bacteria 22411
64 Ga0496126_0014825 3300048929 Bacteria 7863
65 Ga0501233_036527 3300049668 Bacteria 1137
66 Ga0501082_0378669 3300060353 Bacteria 1235
67 2512733212 2512564039 Bacteria 8739048
68 2512736802 2512564039 Bacteria 8739048
69 2524189290 2524023129 Bacteria 6762600
70 2540607899 2540341094 Bacteria 4061186
71 2550901695 2548877040 Bacteria 7507281
72 2550904593 2548877040 Bacteria 7507281
73 2555469976 2554235283 Bacteria 3683090
74 2571529231 2571042143 Bacteria 6986194
75 2587739275 2585428059 Bacteria 8696589
76 2587742131 2585428059 Bacteria 8696589
77 2595319068 2593339198 Bacteria 7267884
78 2595319170 2593339198 Bacteria 7267884
79 2601639240 2600255286 Bacteria 5390125
80 2644422792 2643221676 Bacteria 8119172
81 2644425798 2643221676 Bacteria 8119172
82 2644741561 2643221735 Bacteria 3676263
83 2673818718 2671180694 Bacteria 7506943
84 2686997984 2684623153 Bacteria 3878815
85 2687499327 2687453109 Bacteria 3860091
86 2723604943 2721755693 Bacteria 6126117
87 2728529301 2728368933 Bacteria 7044283
88 2728533929 2728368933 Bacteria 7044283
89 2730135586 2728369359 Bacteria 5621728
90 2753811010 2751185905 Bacteria 6142767
91 2802437257 2802428803 Bacteria 5806948
92 2809056266 2808606399 Bacteria 4021018
93 2812317180 2811994870 Bacteria 3776934
94 2817481275 2816332295 Bacteria 4352468
95 2819672706 2818991459 Bacteria 8736032
96 2819724259 2818991468 Bacteria 3723169
97 2821112467 2821111986 Bacteria 6894338
98 2821112997 2821111986 Bacteria 6894338
99 2821114921 2821111986 Bacteria 6894338
100 2823529144 2823526263 Bacteria 3765752
101 2857455991 2857453340 Bacteria 8090534
102 2857458710 2857453340 Bacteria 8090534
103 2857475277 2857472729 Bacteria 6568124
104 2857476516 2857472729 Bacteria 6568124
105 2860840678 2860837431 Bacteria 4202080
106 2864734864 2864733723 Bacteria 6770668
107 2885527118 2885526491 Bacteria 7164189
108 2885530805 2885526491 Bacteria 7164189
109 2889045574 2889042446 Bacteria 7618936
110 2889052108 2889049205 Bacteria 7524325
111 2889280855 2889276214 Bacteria 5979355
112 2904114343 2904113452 Bacteria 7796941
113 2904162973 2904162308 Bacteria 7086713
114 2904165641 2904162308 Bacteria 7086713
115 2904492448 2904490793 Bacteria 7046938
116 2904598368 2904595352 Bacteria 6124848
117 2904758344 2904755435 Bacteria 7986759
118 2904761141 2904755435 Bacteria 7986759
119 2904761218 2904755435 Bacteria 7986759
120 2907204184 2907202186 Bacteria 6632024
121 2907206521 2907202186 Bacteria 6632024
122 2908667651 2908665501 Bacteria 3678115
123 2919095445 2919093281 Bacteria 3660974
124 2919161673 2919160200 Bacteria 6929020
125 2919161954 2919160200 Bacteria 6929020
126 2919425262 2919425241 Bacteria 8055701
127 2919728847 2919726948 Bacteria 3696050
128 2925330235 2925326138 Bacteria 9652120
129 2925330350 2925326138 Bacteria 9652120
130 2931389007 2931384279 Bacteria 7299545
131 2939681938 2939679117 Bacteria 6921672
132 2945992105 2945991243 Bacteria 7008369
133 2945992417 2945991243 Bacteria 7008369
134 2946055167 2946053406 Bacteria 6978655
135 2954773314 2954773129 Bacteria 3741715
136 2962293897 2962290636 Bacteria 4072939
137 2969139883 2969136845 Bacteria 3923176
138 2969769649 2969765954 Bacteria 4216713
139 2969772712 2969770375 Bacteria 4271280
140 2971403994 2971403814 Bacteria 7370929
141 2971404387 2971403814 Bacteria 7370929
142 2980183721 2980182181 Bacteria 9454109
143 2980184876 2980182181 Bacteria 9454109
144 2980185248 2980182181 Bacteria 9454109
145 2980185959 2980182181 Bacteria 9454109
146 2980188960 2980182181 Bacteria 9454109
147 2980189150 2980182181 Bacteria 9454109
148 2980495672 2980492589 Bacteria 4072961
149 2996709580 2996706504 Bacteria 5757485
150 3006861695 3006858327 Bacteria 4317835
151 3006882144 3006879489 Bacteria 4064221
152 648171012 648028048 Bacteria 5394884
153 8002319236 8002317523 Bacteria 8051857
154 8002320591 8002317523 Bacteria 8051857
155 8022654837 8022653035 Bacteria 4035078
156 8046994393 8046991243 Bacteria 8497463
157 8046997758 8046991243 Bacteria 8497463
158 8054467100 8054465665 Bacteria 7323556
159 8054797723 8054795415 Bacteria 9785225
160 8054798435 8054795415 Bacteria 9785225
161 8056535936 8056533031 Bacteria 8964429
162 8056539413 8056533031 Bacteria 8964429
163 8057737995 8057733483 Bacteria 6578323
164 Ga0439439_0000733
165 Ga0055538_1000428
166 Ga0055538_1000473
167 Ga0055541_1006572
168 Ga0055541_1013123
169 Ga0058862_11417021
170 Ga0070706_100562073
171 Ga0105251_10020790
172 Ga0105244_10025010
173 Ga0206351_10279016
174 Ga0206350_10725850
175 Ga0224712_10006127
176 Ga0209784_100278
177 Ga0209784_100476
178 Ga0209566_100022
179 Ga0209566_100108
180 Ga0209566_100120
181 Ga0209566_101039
182 Ga0209147_110653
183 Ga0209437_100325
184 Ga0209025_1000001
185 Ga0209025_1009322
186 Ga0209025_1031934
187 Ga0395899_0037259
188 Ga0395899_0100011
189 Ga0439436_0000597
190 Ga0439436_0000916
191 Ga0439439_0003929
192 Ga0439433_0002685
193 Ga0439433_0004906
194 Ga0439449_0000426
195 Ga0439449_0000707
196 Ga0439462_0000130
197 Ga0439462_0001849
198 Ga0496115_0000271
199 Ga0496115_0000278
200 Ga0496116_0003884
201 Ga0496116_0031864
202 Ga0496116_0087265
203 Ga0496116_0100155
204 Ga0496116_0147952
205 Ga0496117_0010161
206 Ga0496117_0028847
207 Ga0496118_0147422
208 Ga0496119_0007769
209 Ga0496119_0023373
210 Ga0496120_0000552
211 Ga0496120_0044008
212 Ga0496121_0017773
213 Ga0496121_0088833
214 Ga0496121_0116579
215 Ga0496121_0152309
216 Ga0496122_0028649
217 Ga0496122_0052310
218 Ga0496122_0063486
219 Ga0496122_0079897
220 Ga0496122_0210460
221 Ga0496123_0082188
222 Ga0496124_0000335
223 Ga0496125_0007091
224 Ga0496125_0073482
225 Ga0496126_0001202
226 Ga0496126_0002887
227 Ga0496126_0014825
228 Ga0501233_036527
229 Ga0501082_0378669
230 2512733212
231 2512736802
232 2524189290
233 2540607899
234 2550901695
235 2550904593
236 2555469976
237 2571529231
238 2587739275
239 2587742131
240 2595319068
241 2595319170
242 2601639240
243 2644422792
244 2644425798
245 2644741561
246 2673818718
247 2686997984
248 2687499327
249 2723604943
250 2728529301
251 2728533929
252 2730135586
253 2753811010
254 2802437257
255 2809056266
256 2812317180
257 2817481275
258 2819672706
259 2819724259
260 2821112467
261 2821112997
262 2821114921
263 2823529144
264 2857455991
265 2857458710
266 2857475277
267 2857476516
268 2860840678
269 2864734864
270 2885527118
271 2885530805
272 2889045574
273 2889052108
274 2889280855
275 2904114343
276 2904162973
277 2904165641
278 2904492448
279 2904598368
280 2904758344
281 2904761141
282 2904761218
283 2907204184
284 2907206521
285 2908667651
286 2919095445
287 2919161673
288 2919161954
289 2919425262
290 2919728847
291 2925330235
292 2925330350
293 2931389007
294 2939681938
295 2945992105
296 2945992417
297 2946055167
298 2954773314
299 2962293897
300 2969139883
301 2969769649
302 2969772712
303 2971403994
304 2971404387
305 2980183721
306 2980184876
307 2980185248
308 2980185959
309 2980188960
310 2980189150
311 2980495672
312 2996709580
313 3006861695
314 3006882144
315 648171012
316 8002319236
317 8002320591
318 8022654837
319 8046994393
320 8046997758
321 8054467100
322 8054797723
323 8054798435
324 8056535936
325 8056539413
326 8057737995

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

106

308

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4tqu-assembly1.cif.gz_N crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.9053 1 281
4tqu-assembly1.cif.gz_N crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.896 1 281
3fh6-assembly2.cif.gz_I crystal structure of the resting state maltose transporter from e. coli 0.7792 1 278
4jbw-assembly2.cif.gz_I crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.7723 1 279
3fh6-assembly2.cif.gz_I crystal structure of the resting state maltose transporter from e. coli 0.7651 1 278
ID Description Score Start End Superfamily
4xtcN00 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9042 1 280 1.10.3720.10
af_L7N652_1_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8875 1 281 1.10.3720.10
af_L7N652_1_266_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8813 1 281 1.10.3720.10
4xtcN00 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8796 1 280 1.10.3720.10
af_O53483_6_271_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8537 6 281 1.10.3720.10
ID Description Score Start End GO Terms
AF-B7ST86-F1-model_v4 YtcP 0.9774 35 242 GO:0005886
GO:0055085
AF-A0A4Q3ZA90-F1-model_v4 Carbohydrate ABC transporter permease 0.9714 1 227 GO:0005886
GO:0055085
AF-A0A7X9E8S8-F1-model_v4 Carbohydrate ABC transporter permease 0.9681 33 231 GO:0005886
GO:0055085
AF-A0A2R7QZY7-F1-model_v4 ABC transporter permease 0.9664 1 226 GO:0005886
GO:0055085
AF-A0A3D2X5C3-F1-model_v4 Sugar ABC transporter permease 0.9657 3 215 GO:0005886
GO:0055085

Map