F242139

General Info

Members Datasets Scaffolds Average Seq Length
163 102 326 422

Family's Representative Sequence

Representative Sequence 3300039450|Ga0436363_1142355|Ga0436363_1142355_381_1787
Length 468
Sequence LTVFIVPAAYLLIYRDRDSYSSEAHGLKMRNYFSSKGLVAFVALAFVGLPCFLFGQAAGPVLSLQDAQTLALKNHPQVLASQAGYLRADQIIRQERSAYYPSLNGEVTGAQANVNSRLGAGVLNDPRLFNHFGSGLSLSQLITDSGRTPNLVTNAKLQAQARRENYRATRYDVLLGVNQAYYEVLLSLQLVKVARQTVTTRQTVVGQVSELFKNKLKSQIDVSFAQVNLTDANLMLLRAQDRLETAYASLGQALGTQQSIEYQLTEQPMPPNPPDSADLLIAQAFQNRPELASIRLQREADQKFVYAERDLKRPSVSLTVVGGALPYINPGNANPDIPEGYEAAAINVNIPVFNGHLFSARQQAAEYQLQATDQRVRDLQNRIARDVRTYWGRSKTSFQAIGATEDLLKQANLALDLAQGRYDLGLASIVELTQAQLGQTQAEVENVNAKYDYQEVFAALQYTLGTLH

Samples

Sample ID Description Type Environment
1 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
36 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
70 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
71 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
90 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
91 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
101 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 88.34
Stem 0
Stem Tuber 0
Unclassified 14.11

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436363_1142355 3300039450 Bacteria 3421
2 Ga0070658_10029105 3300005327 Bacteria 4436
3 Ga0070660_100108685 3300005339 Bacteria 2204
4 Ga0070673_100017745 3300005364 Bacteria 5070
5 Ga0070714_100042362 3300005435 Unclassified 3846
6 Ga0070681_10162492 3300005458 Unclassified 2157
7 Ga0070706_100108249 3300005467 Bacteria 2586
8 Ga0070699_100001525 3300005518 Bacteria 21179
9 Ga0068853_100032376 3300005539 Bacteria 4429
10 Ga0070665_100249124 3300005548 Bacteria 1777
11 Ga0068855_100002007 3300005563 Bacteria 25257
12 Ga0068855_100042536 3300005563 Bacteria 5382
13 Ga0068855_100081534 3300005563 Bacteria 3750
14 Ga0068855_100125026 3300005563 Bacteria 2941
15 Ga0070664_100113436 3300005564 Bacteria 2367
16 Ga0068857_100005781 3300005577 Bacteria 10572
17 Ga0068857_100008643 3300005577 Bacteria 8814
18 Ga0068856_100075551 3300005614 Bacteria 3337
19 Ga0068856_100087406 3300005614 Bacteria 3099
20 Ga0068852_100088170 3300005616 Bacteria 2770
21 Ga0068864_100006650 3300005618 Bacteria 9467
22 Ga0068863_100034138 3300005841 Bacteria 4846
23 Ga0068860_100269198 3300005843 Bacteria 1662
24 Ga0081455_10021944 3300005937 Bacteria 5979
25 Ga0097621_100022978 3300006237 Bacteria 4848
26 Ga0068871_100018213 3300006358 Bacteria 5333
27 Ga0075428_100138579 3300006844 Unclassified 2645
28 Ga0075434_100074881 3300006871 Bacteria 3379
29 Ga0075434_100104070 3300006871 Bacteria 2848
30 Ga0068865_100020805 3300006881 Bacteria 4260
31 Ga0075436_100018632 3300006914 Bacteria 4751
32 Ga0075436_100082420 3300006914 Unclassified 2231
33 Ga0105240_10001938 3300009093 Bacteria 34327
34 Ga0105240_10033983 3300009093 Bacteria 6583
35 Ga0105240_10034682 3300009093 Bacteria 6507
36 Ga0105240_10058611 3300009093 Bacteria 4807
37 Ga0105240_10134885 3300009093 Unclassified 2957
38 Ga0105245_10012544 3300009098 Bacteria 7375
39 Ga0105245_10085830 3300009098 Unclassified 2886
40 Ga0114129_10007687 3300009147 Bacteria 15339
41 Ga0105241_10005516 3300009174 Bacteria 9348
42 Ga0105241_10009428 3300009174 Bacteria 7169
43 Ga0105241_10058618 3300009174 Bacteria 2957
44 Ga0105242_10000951 3300009176 Bacteria 22635
45 Ga0105242_10003861 3300009176 Bacteria 11656
46 Ga0105242_10124117 3300009176 Unclassified 2220
47 Ga0105248_10281543 3300009177 Bacteria 1872
48 Ga0105237_10002127 3300009545 Bacteria 24939
49 Ga0105237_10015024 3300009545 Bacteria 8068
50 Ga0105238_10002877 3300009551 Bacteria 17211
51 Ga0105238_10057000 3300009551 Bacteria 3918
52 Ga0105239_10020520 3300010375 Bacteria 7288
53 Ga0105239_10021636 3300010375 Bacteria 7090
54 Ga0105239_10216075 3300010375 Bacteria 2149
55 Ga0105239_10235136 3300010375 Bacteria 2056
56 Ga0157373_10038939 3300013100 Bacteria 3405
57 Ga0157371_10021984 3300013102 Bacteria 4682
58 Ga0157370_10000819 3300013104 Bacteria 39339
59 Ga0157370_10296004 3300013104 Bacteria 1494
60 Ga0157369_10008808 3300013105 Bacteria 11563
61 Ga0157369_10063425 3300013105 Bacteria 3981
62 Ga0157369_10121284 3300013105 Unclassified 2774
63 Ga0157374_10002757 3300013296 Bacteria 14750
64 Ga0157374_10021082 3300013296 Bacteria 5792
65 Ga0157372_10401799 3300013307 Unclassified 1596
66 Ga0157375_10005874 3300013308 Bacteria 10687
67 Ga0163163_10003891 3300014325 Bacteria 12727
68 Ga0163163_10019237 3300014325 Bacteria 6411
69 Ga0163163_10182622 3300014325 Unclassified 2145
70 Ga0157376_10003019 3300014969 Bacteria 11546
71 Ga0213873_10007947 3300021358 Bacteria 2146
72 Ga0213873_10020359 3300021358 Unclassified 1549
73 Ga0213876_10019454 3300021384 Bacteria 3587
74 Ga0213875_10002267 3300021388 Bacteria 11667
75 Ga0207699_10158463 3300025906 Bacteria 1504
76 Ga0207654_10004751 3300025911 Bacteria 6880
77 Ga0207654_10035300 3300025911 Unclassified 2785
78 Ga0207707_10025997 3300025912 Bacteria 5119
79 Ga0207707_10082146 3300025912 Bacteria 2813
80 Ga0207707_10094555 3300025912 Bacteria 2611
81 Ga0207695_10018443 3300025913 Bacteria 8072
82 Ga0207660_10069212 3300025917 Bacteria 2562
83 Ga0207646_10190829 3300025922 Bacteria 1851
84 Ga0207694_10003348 3300025924 Bacteria 12754
85 Ga0207687_10032183 3300025927 Bacteria 3550
86 Ga0207700_10047195 3300025928 Bacteria 3191
87 Ga0207686_10004742 3300025934 Bacteria 7294
88 Ga0207686_10043355 3300025934 Unclassified 2756
89 Ga0207711_10185432 3300025941 Bacteria 1894
90 Ga0207667_10066489 3300025949 Bacteria 3757
91 Ga0207667_10068517 3300025949 Bacteria 3695
92 Ga0207639_10183273 3300026041 Bacteria 1783
93 Ga0207702_10147939 3300026078 Bacteria 2134
94 Ga0207648_10015807 3300026089 Bacteria 6919
95 Ga0207676_10004866 3300026095 Bacteria 9509
96 Ga0207674_10010099 3300026116 Bacteria 10735
97 Ga0207674_10013168 3300026116 Bacteria 9204
98 Ga0207674_10013976 3300026116 Bacteria 8877
99 Ga0268266_10026228 3300028379 Bacteria 4959
100 Ga0268264_10213386 3300028381 Bacteria 1773
101 Ga0265338_10038141 3300028800 Unclassified 4558
102 Ga0265338_10192782 3300028800 Unclassified 1543
103 Ga0265328_10013213 3300031239 Bacteria 3273
104 Ga0265320_10003413 3300031240 Bacteria 10691
105 Ga0265340_10028119 3300031247 Bacteria 2830
106 Ga0265331_10003838 3300031250 Bacteria 9526
107 Ga0265316_10006431 3300031344 Bacteria 11227
108 Ga0265316_10007844 3300031344 Bacteria 9996
109 Ga0265316_10013370 3300031344 Bacteria 7295
110 Ga0265316_10030862 3300031344 Bacteria 4388
111 Ga0265314_10000739 3300031711 Bacteria 39287
112 Ga0265314_10001906 3300031711 Bacteria 22292
113 Ga0265342_10101111 3300031712 Unclassified 1642
114 Ga0373927_0015995 3300035695 Bacteria 4952
115 Ga0373937_0006101 3300036401 Bacteria 10372
116 Ga0373925_0052114 3300037068 Bacteria 3057
117 Ga0436364_0321150 3300037853 Bacteria 2170
118 Ga0436364_0344024 3300037853 Unclassified 4702
119 Ga0436364_0349374 3300037853 Bacteria 8156
120 Ga0436364_0373543 3300037853 Bacteria 5699
121 Ga0436364_0616829 3300037853 Bacteria 4557
122 Ga0436364_0667178 3300037853 Bacteria 4698
123 Ga0436364_1182667 3300037853 Bacteria 19687
124 Ga0436364_1443221 3300037853 Bacteria 8110
125 Ga0436365_0026098 3300039437 Bacteria 2870
126 Ga0436365_0281604 3300039437 Bacteria 4004
127 Ga0436365_0565764 3300039437 Bacteria 4654
128 Ga0436365_0802812 3300039437 Bacteria 10967
129 Ga0436365_1044264 3300039437 Bacteria 4589
130 Ga0436365_1415979 3300039437 Bacteria 2983
131 Ga0436365_1834866 3300039437 Bacteria 1657
132 Ga0436363_0777380 3300039450 Bacteria 3948
133 Ga0436362_0001572 3300039453 Unclassified 2796
134 Ga0436362_0168692 3300039453 Bacteria 5262
135 Ga0436362_0662127 3300039453 Unclassified 1954
136 Ga0436362_0926531 3300039453 Bacteria 3703
137 Ga0495580_0043687 3300046472 Unclassified 3189
138 Ga0495580_0135164 3300046472 Bacteria 1710
139 Ga0495684_0073320 3300047471 Bacteria 2601
140 Ga0501033_0016587 3300049570 Bacteria 5572
141 Ga0501036_0000513 3300049572 Bacteria 27816
142 Ga0501038_0008926 3300049574 Bacteria 9197
143 Ga0501043_0004256 3300049579 Bacteria 11653
144 Ga0501046_0001799 3300049580 Bacteria 20444
145 Ga0501047_0287470 3300049581 Bacteria 1488
146 Ga0501048_0008036 3300049582 Bacteria 7991
147 Ga0501067_0001010 3300049583 Bacteria 15107
148 Ga0501068_0003310 3300049584 Bacteria 8636
149 Ga0501069_0000298 3300049585 Bacteria 22489
150 Ga0501070_0030009 3300049586 Unclassified 4556
151 Ga0501073_0001104 3300049589 Bacteria 19571
152 Ga0501079_0000123 3300049741 Bacteria 41037
153 Ga0501080_0000370 3300049742 Bacteria 34770
154 Ga0501080_0163802 3300049742 Unclassified 2053
155 Ga0501083_0070946 3300049744 Unclassified 2316
156 Ga0501035_0083932 3300049822 Bacteria 2810
157 Ga0501044_0021509 3300049823 Bacteria 6879
158 Ga0501044_0029175 3300049823 Bacteria 5819
159 nmdc:mga05p37_9049_c1 3300050507 Bacteria 11772
160 nmdc:mga0n895_109872_c1 3300050512 Bacteria 2772
161 nmdc:mga08x19_284_c1 3300050514 Bacteria 37998
162 nmdc:mga08x19_47935_c1 3300050514 Bacteria 2736
163 Ga0501084_0001649 3300054114 Bacteria 17752
164 Ga0436363_1142355
165 Ga0070658_10029105
166 Ga0070660_100108685
167 Ga0070673_100017745
168 Ga0070714_100042362
169 Ga0070681_10162492
170 Ga0070706_100108249
171 Ga0070699_100001525
172 Ga0068853_100032376
173 Ga0070665_100249124
174 Ga0068855_100002007
175 Ga0068855_100042536
176 Ga0068855_100081534
177 Ga0068855_100125026
178 Ga0070664_100113436
179 Ga0068857_100005781
180 Ga0068857_100008643
181 Ga0068856_100075551
182 Ga0068856_100087406
183 Ga0068852_100088170
184 Ga0068864_100006650
185 Ga0068863_100034138
186 Ga0068860_100269198
187 Ga0081455_10021944
188 Ga0097621_100022978
189 Ga0068871_100018213
190 Ga0075428_100138579
191 Ga0075434_100074881
192 Ga0075434_100104070
193 Ga0068865_100020805
194 Ga0075436_100018632
195 Ga0075436_100082420
196 Ga0105240_10001938
197 Ga0105240_10033983
198 Ga0105240_10034682
199 Ga0105240_10058611
200 Ga0105240_10134885
201 Ga0105245_10012544
202 Ga0105245_10085830
203 Ga0114129_10007687
204 Ga0105241_10005516
205 Ga0105241_10009428
206 Ga0105241_10058618
207 Ga0105242_10000951
208 Ga0105242_10003861
209 Ga0105242_10124117
210 Ga0105248_10281543
211 Ga0105237_10002127
212 Ga0105237_10015024
213 Ga0105238_10002877
214 Ga0105238_10057000
215 Ga0105239_10020520
216 Ga0105239_10021636
217 Ga0105239_10216075
218 Ga0105239_10235136
219 Ga0157373_10038939
220 Ga0157371_10021984
221 Ga0157370_10000819
222 Ga0157370_10296004
223 Ga0157369_10008808
224 Ga0157369_10063425
225 Ga0157369_10121284
226 Ga0157374_10002757
227 Ga0157374_10021082
228 Ga0157372_10401799
229 Ga0157375_10005874
230 Ga0163163_10003891
231 Ga0163163_10019237
232 Ga0163163_10182622
233 Ga0157376_10003019
234 Ga0213873_10007947
235 Ga0213873_10020359
236 Ga0213876_10019454
237 Ga0213875_10002267
238 Ga0207699_10158463
239 Ga0207654_10004751
240 Ga0207654_10035300
241 Ga0207707_10025997
242 Ga0207707_10082146
243 Ga0207707_10094555
244 Ga0207695_10018443
245 Ga0207660_10069212
246 Ga0207646_10190829
247 Ga0207694_10003348
248 Ga0207687_10032183
249 Ga0207700_10047195
250 Ga0207686_10004742
251 Ga0207686_10043355
252 Ga0207711_10185432
253 Ga0207667_10066489
254 Ga0207667_10068517
255 Ga0207639_10183273
256 Ga0207702_10147939
257 Ga0207648_10015807
258 Ga0207676_10004866
259 Ga0207674_10010099
260 Ga0207674_10013168
261 Ga0207674_10013976
262 Ga0268266_10026228
263 Ga0268264_10213386
264 Ga0265338_10038141
265 Ga0265338_10192782
266 Ga0265328_10013213
267 Ga0265320_10003413
268 Ga0265340_10028119
269 Ga0265331_10003838
270 Ga0265316_10006431
271 Ga0265316_10007844
272 Ga0265316_10013370
273 Ga0265316_10030862
274 Ga0265314_10000739
275 Ga0265314_10001906
276 Ga0265342_10101111
277 Ga0373927_0015995
278 Ga0373937_0006101
279 Ga0373925_0052114
280 Ga0436364_0321150
281 Ga0436364_0344024
282 Ga0436364_0349374
283 Ga0436364_0373543
284 Ga0436364_0616829
285 Ga0436364_0667178
286 Ga0436364_1182667
287 Ga0436364_1443221
288 Ga0436365_0026098
289 Ga0436365_0281604
290 Ga0436365_0565764
291 Ga0436365_0802812
292 Ga0436365_1044264
293 Ga0436365_1415979
294 Ga0436365_1834866
295 Ga0436363_0777380
296 Ga0436362_0001572
297 Ga0436362_0168692
298 Ga0436362_0662127
299 Ga0436362_0926531
300 Ga0495580_0043687
301 Ga0495580_0135164
302 Ga0495684_0073320
303 Ga0501033_0016587
304 Ga0501036_0000513
305 Ga0501038_0008926
306 Ga0501043_0004256
307 Ga0501046_0001799
308 Ga0501047_0287470
309 Ga0501048_0008036
310 Ga0501067_0001010
311 Ga0501068_0003310
312 Ga0501069_0000298
313 Ga0501070_0030009
314 Ga0501073_0001104
315 Ga0501079_0000123
316 Ga0501080_0000370
317 Ga0501080_0163802
318 Ga0501083_0070946
319 Ga0501035_0083932
320 Ga0501044_0021509
321 Ga0501044_0029175
322 nmdc:mga05p37_9049_c1
323 nmdc:mga0n895_109872_c1
324 nmdc:mga08x19_284_c1
325 nmdc:mga08x19_47935_c1
326 Ga0501084_0001649

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02321

OEP

Outer membrane efflux protein

64

255

0.99

PF02321

OEP

Outer membrane efflux protein

277

465

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yc9-assembly1.cif.gz_A the crystal structure of the outer membrane protein vcec from the bacterial pathogen vibrio cholerae at 1.8 resolution 0.8713 37 408
2f1m-assembly1.cif.gz_B conformational flexibility in the multidrug efflux system protein acra 0.8663 145 215
4k7r-assembly1.cif.gz_A crystal structures of cusc review conformational changes accompanying folding and transmembrane channel formation 0.8631 37 407
5azp-assembly1.cif.gz_A crystal structure of a membrane protein from pseudomonas aeruginosa 0.8562 37 410
5ng5-assembly1.cif.gz_B multi-drug efflux; membrane transport; rnd superfamily; drug resistance 0.8492 145 216
ID Description Score Start End Superfamily
2f1mC03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9486 145 213 1.10.287.470
af_P75830_95_182_6.10.140.1990 Special;Helix non-globular;Helix Hairpins; 0.9384 134 215 6.10.140.1990
2f1mD03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9218 145 213 1.10.287.470
2f1mA03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9133 145 213 1.10.287.470
2f1mB03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.8766 145 213 1.10.287.470
ID Description Score Start End GO Terms
AF-A0A534RBB2-F1-model_v4 TolC family protein 0.9267 97 408 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A348WBS9-F1-model_v4 Transporter 0.9123 123 408 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A349H0P8-F1-model_v4 TolC family protein 0.9079 134 235 GO:0015562
AF-A0A3M1Y3M7-F1-model_v4 TolC family protein 0.9064 39 410 GO:0009279
GO:0015288
GO:0015562
GO:1990281
AF-A0A533ZAG8-F1-model_v4 TolC family protein 0.9046 115 411 GO:0009279
GO:0015288
GO:0015562
GO:1990281

Map