F240502

General Info

Members Datasets Scaffolds Average Seq Length
162 120 324 458

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2918501144|2918505269
Length 532
Sequence SAVPSPAHDRAHEAQAHEAQAHEAQAHEAQAHEAQAHDHPHPDAHPDPRRWKALALICAAQFMLVLDVTVVNVALPALATDLDLGRTALTWVVTAYTLCFGGLMLLGGRLADALGARRVLLVGLALFTAASLACGLAPNAAVLLGGRIAQGIGAALLSPAALALVATVFHGPERPKALGVWAAVGGTGSAVGVLLGGALTAGPGWPWIFYVNVPVGLAVLATLPRFVPTTPATPATPDTPPTPDTPPTPATAKPARRGARGLDVPGALLVTTATGALVYGLVTAGDSGWTSTATLLPLLGALVLYGAFAATERRTRVPLMDPRMFTRRPVVVGSLLMLVATALLISFFFLGSMHLQHVHHLDALRTGLLFLPVALTTAIGAHLGSRLVSTAGPRVCATGGLAVAALGCLPLVFADPASGPWTTLLPSLAAASLGLGAVFVTATTTALGLIAPQEAGLASGIVNTFHELGGSIGVALVSTLALTATATPAPTPAGLTAAYTLCTLTAATAALASPLLIPRGRPHLTGGPHGAH

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
35 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
50 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
51 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
58 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
59 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
60 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
61 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
62 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
63 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
64 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
65 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
66 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
67 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
68 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
69 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
70 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
71 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
72 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
73 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
74 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
75 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
76 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
77 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
78 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
79 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
80 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
81 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
82 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
85 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
86 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
87 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
88 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
89 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
90 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
91 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
92 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
93 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
94 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
98 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
99 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
100 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
101 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
102 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
103 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
104 2643221615 Nocardioides sp. Root224 Isolate Unclassified
105 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
106 2643221662 Devosia sp. Root413D1 Isolate Unclassified
107 2643221670 Streptomyces sp. Root431 Isolate Unclassified
108 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
109 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
110 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
111 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
112 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
113 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
114 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
115 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
116 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
117 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
118 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
119 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
120 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.04
Metatranscriptomes 0.62
Isolates 12.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.23
Nodule 0
Rhizoplane 4.32
Rhizosphere 84.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10014932 3300003316 Bacteria 8416
2 rootL2_10021509 3300003322 Bacteria 19151
3 rootH1_10034057 3300003323 Bacteria 6597
4 Ga0070658_10022889 3300005327 Bacteria 5015
5 Ga0070658_10024016 3300005327 Bacteria 4892
6 Ga0070658_10037614 3300005327 Bacteria 3902
7 Ga0070680_100002375 3300005336 Bacteria 13913
8 Ga0070680_100012269 3300005336 Bacteria 6654
9 Ga0070660_100048978 3300005339 Bacteria 3246
10 Ga0070660_100071164 3300005339 Bacteria 2715
11 Ga0070668_100009099 3300005347 Bacteria 7376
12 Ga0070659_100022932 3300005366 Bacteria 4771
13 Ga0070714_100056401 3300005435 Bacteria 3360
14 Ga0070708_100141158 3300005445 Bacteria 2234
15 Ga0070681_10026127 3300005458 Bacteria 5871
16 Ga0070681_10029085 3300005458 Bacteria 5547
17 Ga0070681_10037432 3300005458 Bacteria 4868
18 Ga0070681_10105746 3300005458 Bacteria 2757
19 Ga0070706_100003596 3300005467 Bacteria 15203
20 Ga0070706_100142434 3300005467 Bacteria 2238
21 Ga0070707_100009347 3300005468 Bacteria 9099
22 Ga0070707_100027116 3300005468 Bacteria 5447
23 Ga0070698_100136206 3300005471 Bacteria 2409
24 Ga0070699_100056785 3300005518 Bacteria 3390
25 Ga0070679_100017394 3300005530 Bacteria 6958
26 Ga0070679_100022383 3300005530 Bacteria 6178
27 Ga0070679_100141760 3300005530 Bacteria 2382
28 Ga0070684_100019430 3300005535 Bacteria 5620
29 Ga0068853_100130984 3300005539 Bacteria 2245
30 Ga0070665_100132482 3300005548 Bacteria 2495
31 Ga0068855_100039218 3300005563 Bacteria 5623
32 Ga0068855_100117985 3300005563 Bacteria 3039
33 Ga0068857_100155458 3300005577 Bacteria 2074
34 Ga0068866_10085304 3300005718 Bacteria 1706
35 Ga0081455_10004450 3300005937 Bacteria 15713
36 Ga0081455_10030888 3300005937 Bacteria 4859
37 Ga0081538_10001586 3300005981 Bacteria 23317
38 Ga0070717_10005052 3300006028 Bacteria 9615
39 Ga0075363_100009490 3300006048 Bacteria 4575
40 Ga0105240_10015316 3300009093 Bacteria 10431
41 Ga0105239_10245904 3300010375 Bacteria 2008
42 Ga0105246_10130569 3300011119 Bacteria 1876
43 Ga0157373_10038518 3300013100 Bacteria 3426
44 Ga0157370_10004001 3300013104 Bacteria 17127
45 Ga0157370_10082746 3300013104 Bacteria 3018
46 Ga0157369_10077565 3300013105 Bacteria 3561
47 Ga0157372_10125250 3300013307 Bacteria 2954
48 Ga0183367_1022 3300015688 Bacteria 55022
49 Ga0206353_11556875 3300020082 Bacteria 3443
50 Ga0207705_10043236 3300025909 Bacteria 3236
51 Ga0207705_10176407 3300025909 Bacteria 1611
52 Ga0207684_10007776 3300025910 Bacteria 9593
53 Ga0207684_10015712 3300025910 Bacteria 6515
54 Ga0207707_10002680 3300025912 Bacteria 15912
55 Ga0207707_10113469 3300025912 Bacteria 2368
56 Ga0207707_10139678 3300025912 Bacteria 2118
57 Ga0207707_10212629 3300025912 Bacteria 1684
58 Ga0207660_10157106 3300025917 Bacteria 1751
59 Ga0207657_10001416 3300025919 Bacteria 25595
60 Ga0207657_10002341 3300025919 Bacteria 20536
61 Ga0207657_10005580 3300025919 Bacteria 13138
62 Ga0207657_10019915 3300025919 Bacteria 6358
63 Ga0207652_10050843 3300025921 Bacteria 3552
64 Ga0207646_10000289 3300025922 Bacteria 69345
65 Ga0207646_10002953 3300025922 Bacteria 19687
66 Ga0207664_10004508 3300025929 Bacteria 9438
67 Ga0207664_10009380 3300025929 Bacteria 6865
68 Ga0207664_10058918 3300025929 Bacteria 3057
69 Ga0207661_10041162 3300025944 Bacteria 3636
70 Ga0207667_10071877 3300025949 Bacteria 3596
71 Ga0207674_10004193 3300026116 Bacteria 17401
72 Ga0207674_10023662 3300026116 Bacteria 6576
73 Ga0316176_1099106 3300030732 Bacteria 4908
74 Ga0307408_100104507 3300031548 Bacteria 2164
75 Ga0307405_10061657 3300031731 Bacteria 2371
76 Ga0307410_10049131 3300031852 Bacteria 2830
77 Ga0307410_10057786 3300031852 Bacteria 2643
78 Ga0307409_100028736 3300031995 Bacteria 3967
79 Ga0307409_100076329 3300031995 Bacteria 2686
80 Ga0307409_100109135 3300031995 Bacteria 2316
81 Ga0307416_100027736 3300032002 Bacteria 4199
82 Ga0307416_100047893 3300032002 Bacteria 3387
83 Ga0307416_100107778 3300032002 Bacteria 2446
84 Ga0307416_100148110 3300032002 Bacteria 2147
85 Ga0307415_100076404 3300032126 Bacteria 2374
86 Ga0307415_100100125 3300032126 Bacteria 2123
87 Ga0395900_0081915 3300037418 Bacteria 3315
88 Ga0395900_0092957 3300037418 Bacteria 3099
89 Ga0395900_0176286 3300037418 Bacteria 2174
90 Ga0395898_0022133 3300037466 Bacteria 6440
91 Ga0395898_0077542 3300037466 Bacteria 3208
92 Ga0395905_0064599 3300037471 Bacteria 3425
93 Ga0395901_0000846 3300038443 Bacteria 33692
94 Ga0439433_0006968 3300041999 Bacteria 2439
95 Ga0466972_0022713 3300044658 Bacteria 3122
96 Ga0466963_0089211 3300044694 Bacteria 2097
97 Ga0466958_0030810 3300045836 Bacteria 3188
98 Ga0495592_0014945 3300046454 Bacteria 5894
99 Ga0495592_0151220 3300046454 Bacteria 1605
100 Ga0495603_0017125 3300046455 Bacteria 4386
101 Ga0495638_0121271 3300046460 Bacteria 1545
102 Ga0495651_0000666 3300046462 Bacteria 26661
103 Ga0495651_0033270 3300046462 Bacteria 4022
104 Ga0495662_0004921 3300046476 Bacteria 6687
105 Ga0495664_0001181 3300046477 Bacteria 13611
106 Ga0495594_0012808 3300046499 Bacteria 4373
107 Ga0495607_0027192 3300046501 Bacteria 3541
108 Ga0495620_0036532 3300046515 Bacteria 2197
109 Ga0495631_0044268 3300046518 Bacteria 1962
110 Ga0495666_0025341 3300046526 Bacteria 2928
111 Ga0495652_0001678 3300046529 Bacteria 24017
112 Ga0495645_0049155 3300046543 Bacteria 3071
113 Ga0495622_0006989 3300046557 Bacteria 5239
114 Ga0495668_0049922 3300046616 Bacteria 2320
115 Ga0495634_0001301 3300046642 Bacteria 22810
116 Ga0495635_0000606 3300046663 Bacteria 23102
117 Ga0495588_0040044 3300046674 Bacteria 2389
118 Ga0495657_0004540 3300046675 Bacteria 11089
119 Ga0495599_0035128 3300046678 Bacteria 3147
120 Ga0495646_0008179 3300046680 Bacteria 6647
121 Ga0495658_0032460 3300046683 Bacteria 2851
122 Ga0495613_0019289 3300046689 Bacteria 5084
123 Ga0495649_0015851 3300046694 Bacteria 4283
124 Ga0495589_0026923 3300046794 Bacteria 2911
125 Ga0495600_0006186 3300046809 Bacteria 7259
126 Ga0495581_0023811 3300047315 Bacteria 3548
127 Ga0495604_0000913 3300047317 Bacteria 24545
128 Ga0495604_0216540 3300047317 Bacteria 1321
129 Ga0495676_0019401 3300047321 Bacteria 5981
130 Ga0495685_021519 3300047447 Bacteria 2218
131 Ga0495686_0129651 3300047472 Bacteria 1496
132 Ga0495593_0001891 3300047673 Bacteria 12467
133 Ga0495602_0007632 3300048088 Bacteria 11306
134 Ga0496104_0043475 3300048907 Bacteria 4220
135 Ga0496104_0048346 3300048907 Bacteria 4011
136 Ga0496105_0034442 3300048908 Bacteria 4165
137 Ga0496105_0210809 3300048908 Bacteria 1584
138 Ga0496106_0066668 3300048909 Bacteria 2742
139 Ga0496107_0063188 3300048910 Bacteria 2683
140 Ga0496112_0005644 3300048915 Bacteria 10864
141 Ga0495619_0174215 3300053085 Bacteria 1488
142 Ga0500573_0072252 3300053140 Bacteria 1967
143 2918505269 2918501144 Bacteria 8668083
144 2643947781 2643221587 Bacteria 7586415
145 2644091932 2643221615 Bacteria 5487866
146 2644321735 2643221657 Bacteria 5490246
147 2644346680 2643221662 Bacteria 5851492
148 2644390779 2643221670 Bacteria 6497041
149 2644433646 2643221677 Bacteria 7584031
150 2644439083 2643221678 Bacteria 9540101
151 2808849052 2808606359 Bacteria 9866990
152 2862281645 2862281513 Bacteria 9621493
153 2862289140 2862281513 Bacteria 9621493
154 2863409685 2863404153 Bacteria 9672205
155 2868095906 2868088558 Bacteria 7609351
156 2884703831 2884693830 Bacteria 11273186
157 2891404080 2891395885 Bacteria 9251614
158 2895448813 2895442618 Bacteria 11027144
159 2947224860 2947224130 Bacteria 9938529
160 2954700599 2954691527 Bacteria 10720516
161 2954701632 2954701450 Bacteria 10834262
162 2954740180 2954731030 Bacteria 10243860
163 rootH1_10014932
164 rootL2_10021509
165 rootH1_10034057
166 Ga0070658_10022889
167 Ga0070658_10024016
168 Ga0070658_10037614
169 Ga0070680_100002375
170 Ga0070680_100012269
171 Ga0070660_100048978
172 Ga0070660_100071164
173 Ga0070668_100009099
174 Ga0070659_100022932
175 Ga0070714_100056401
176 Ga0070708_100141158
177 Ga0070681_10026127
178 Ga0070681_10029085
179 Ga0070681_10037432
180 Ga0070681_10105746
181 Ga0070706_100003596
182 Ga0070706_100142434
183 Ga0070707_100009347
184 Ga0070707_100027116
185 Ga0070698_100136206
186 Ga0070699_100056785
187 Ga0070679_100017394
188 Ga0070679_100022383
189 Ga0070679_100141760
190 Ga0070684_100019430
191 Ga0068853_100130984
192 Ga0070665_100132482
193 Ga0068855_100039218
194 Ga0068855_100117985
195 Ga0068857_100155458
196 Ga0068866_10085304
197 Ga0081455_10004450
198 Ga0081455_10030888
199 Ga0081538_10001586
200 Ga0070717_10005052
201 Ga0075363_100009490
202 Ga0105240_10015316
203 Ga0105239_10245904
204 Ga0105246_10130569
205 Ga0157373_10038518
206 Ga0157370_10004001
207 Ga0157370_10082746
208 Ga0157369_10077565
209 Ga0157372_10125250
210 Ga0183367_1022
211 Ga0206353_11556875
212 Ga0207705_10043236
213 Ga0207705_10176407
214 Ga0207684_10007776
215 Ga0207684_10015712
216 Ga0207707_10002680
217 Ga0207707_10113469
218 Ga0207707_10139678
219 Ga0207707_10212629
220 Ga0207660_10157106
221 Ga0207657_10001416
222 Ga0207657_10002341
223 Ga0207657_10005580
224 Ga0207657_10019915
225 Ga0207652_10050843
226 Ga0207646_10000289
227 Ga0207646_10002953
228 Ga0207664_10004508
229 Ga0207664_10009380
230 Ga0207664_10058918
231 Ga0207661_10041162
232 Ga0207667_10071877
233 Ga0207674_10004193
234 Ga0207674_10023662
235 Ga0316176_1099106
236 Ga0307408_100104507
237 Ga0307405_10061657
238 Ga0307410_10049131
239 Ga0307410_10057786
240 Ga0307409_100028736
241 Ga0307409_100076329
242 Ga0307409_100109135
243 Ga0307416_100027736
244 Ga0307416_100047893
245 Ga0307416_100107778
246 Ga0307416_100148110
247 Ga0307415_100076404
248 Ga0307415_100100125
249 Ga0395900_0081915
250 Ga0395900_0092957
251 Ga0395900_0176286
252 Ga0395898_0022133
253 Ga0395898_0077542
254 Ga0395905_0064599
255 Ga0395901_0000846
256 Ga0439433_0006968
257 Ga0466972_0022713
258 Ga0466963_0089211
259 Ga0466958_0030810
260 Ga0495592_0014945
261 Ga0495592_0151220
262 Ga0495603_0017125
263 Ga0495638_0121271
264 Ga0495651_0000666
265 Ga0495651_0033270
266 Ga0495662_0004921
267 Ga0495664_0001181
268 Ga0495594_0012808
269 Ga0495607_0027192
270 Ga0495620_0036532
271 Ga0495631_0044268
272 Ga0495666_0025341
273 Ga0495652_0001678
274 Ga0495645_0049155
275 Ga0495622_0006989
276 Ga0495668_0049922
277 Ga0495634_0001301
278 Ga0495635_0000606
279 Ga0495588_0040044
280 Ga0495657_0004540
281 Ga0495599_0035128
282 Ga0495646_0008179
283 Ga0495658_0032460
284 Ga0495613_0019289
285 Ga0495649_0015851
286 Ga0495589_0026923
287 Ga0495600_0006186
288 Ga0495581_0023811
289 Ga0495604_0000913
290 Ga0495604_0216540
291 Ga0495676_0019401
292 Ga0495685_021519
293 Ga0495686_0129651
294 Ga0495593_0001891
295 Ga0495602_0007632
296 Ga0496104_0043475
297 Ga0496104_0048346
298 Ga0496105_0034442
299 Ga0496105_0210809
300 Ga0496106_0066668
301 Ga0496107_0063188
302 Ga0496112_0005644
303 Ga0495619_0174215
304 Ga0500573_0072252
305 2918505269
306 2643947781
307 2644091932
308 2644321735
309 2644346680
310 2644390779
311 2644433646
312 2644439083
313 2808849052
314 2862281645
315 2862289140
316 2863409685
317 2868095906
318 2884703831
319 2891404080
320 2895448813
321 2947224860
322 2954700599
323 2954701632
324 2954740180

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

57

474

0.88

PF00083

Sugar_tr

Sugar (and other) transporter

20

232

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8636 1 475
7d5q-assembly1.cif.gz_A structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8396 18 475
7d5p-assembly2.cif.gz_B structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8381 18 475
7d5p-assembly1.cif.gz_A structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8367 17 475
7d5q-assembly1.cif.gz_A structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8359 18 475
ID Description Score Start End Superfamily
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9619 20 205 1.20.1250.20
af_P36554_12_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9455 20 214 1.20.1250.20
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9421 20 205 1.20.1250.20
af_A0A1D8PEJ7_80_330_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9386 20 261 1.20.1250.20
af_Q03263_69_259_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9357 16 194 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A6G3VUH5-F1-model_v4 deleted 0.9755 18 205
AF-A0A2K2TJ46-F1-model_v4 MFS transporter 0.972 15 154 GO:0005886
GO:0022857
AF-A0A6G3VUH5-F1-model_v4 deleted 0.9654 18 205
AF-A0A3D1QCW4-F1-model_v4 MFS transporter 0.9335 13 230 GO:0005886
GO:0022857
AF-A0A2K2TJ46-F1-model_v4 MFS transporter 0.9327 15 154 GO:0005886
GO:0022857

Map