F240057

General Info

Members Datasets Scaffolds Average Seq Length
162 137 324 434

Family's Representative Sequence

Representative Sequence 3300046506|Ga0495583_0001925|Ga0495583_0001925_12896_14176
Length 395
Sequence VLIAFLIFLITLTFVIWQPRGLGIGWSAAAGAAVALLAGVIHVSDIPTVWHIVWNATGAFVAVIIISLLLDKAGFFEWAALHVARWGTPIVIAMLAALRFTPQATLAFVMAAGFIADTASLPLVVSNLVNIVSSDYFDIGFARYAAVMVPVNLVSVGATLAALVWFFRKDIPADYDLAQLKRPDEAIHDRATFITGWWVLGMLLIGFFWLDDAGVPISAVAAVGAMLLLAVAARGHRISTREVLRGAPWQVVVFSLGMYLVVYGLRNAGLTDYLTALLNRCAEHGVWGAALGTGFITAILSSVMNNMPTVLVGALAIDATTAQGVVREAMVYANVIGADLGPKITPIGSLATLLWLHVLSAKNIQISWGYYFRVGILLTLPILLVTLSALALRLS

Samples

Sample ID Description Type Environment
1 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
5 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
6 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
7 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
8 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
9 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
10 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
11 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
12 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
13 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
14 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
15 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
16 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
17 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
18 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
21 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
22 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
23 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
24 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
25 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
26 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
27 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
28 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
29 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
30 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
31 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
32 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
33 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
34 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
35 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
36 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
37 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
38 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
39 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
40 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
41 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
42 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
43 3300049518 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_B_5_control Metagenome Rhizosphere
44 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
45 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
46 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
47 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
48 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
49 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
50 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
51 2671180694 Paenibacillus sp. A3 Isolate Unclassified
52 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
53 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
54 2738541295 Bacillus sp. OK085 Isolate Unclassified
55 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
56 2738543010 Bacillus sp. YR335 Isolate Unclassified
57 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
58 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
59 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
60 2811994870 Bacillus sp. JB4 Isolate Unclassified
61 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
62 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
63 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
64 2818991459 Paenibacillus sp. 597 Isolate Unclassified
65 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
66 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
67 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
68 2842682962 Bacillus sp. R-72492 Isolate Unclassified
69 2842882022 Bacillus sp. R-71893 Isolate Unclassified
70 2849139964 Bacillus sp. R-71875 Isolate Unclassified
71 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
72 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
73 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
74 2857472729 Cohnella sp. R-74144 Isolate Unclassified
75 2857581216 Bacillus sp. R-71922 Isolate Unclassified
76 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
77 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
78 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
79 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
80 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
81 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
82 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
83 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
84 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
85 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
86 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
87 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
88 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
89 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
90 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
91 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
92 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
93 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
94 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
95 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
96 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
97 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
98 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
99 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
100 2919720352 Priestia megaterium 4340 Isolate Unclassified
101 2919726948 Bacillus pumilus 4489 Isolate Unclassified
102 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
103 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
104 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
105 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
106 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
107 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
108 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
109 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
110 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
111 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
112 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
113 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
114 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
115 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
116 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
117 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
118 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
119 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
120 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
121 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
122 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
123 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
124 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
125 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
126 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
127 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
128 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
129 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
130 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
131 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
132 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
133 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
134 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
135 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
136 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere
137 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 34.57
Metatranscriptomes 1.23
Isolates 64.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.02
Nodule 1.23
Rhizoplane 7.41
Rhizosphere 38.27
Stem 0
Stem Tuber 0
Unclassified 0.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495583_0001925 3300046506 Bacteria 19210
2 rootL2_10252695 3300003322 Bacteria 3947
3 Ga0006562J51391_1008264 3300003578 Bacteria 6420
4 Ga0055538_1000179 3300003751 Bacteria 40015
5 Ga0055541_1002800 3300003841 Bacteria 3383
6 Ga0105244_10098920 3300009036 Bacteria 1428
7 Ga0105242_10175779 3300009176 Bacteria 1885
8 Ga0105246_10000132 3300011119 Bacteria 34860
9 Ga0157377_10075302 3300014745 Bacteria 1960
10 Ga0209784_100129 3300025224 Bacteria 76203
11 Ga0209566_100305 3300025225 Bacteria 44437
12 Ga0209566_100314 3300025225 Bacteria 43901
13 Ga0209566_103315 3300025225 Bacteria 2521
14 Ga0209147_100136 3300025229 Bacteria 117683
15 Ga0209673_1003250 3300025273 Bacteria 9813
16 Ga0209675_1000755 3300025291 Bacteria 21747
17 Ga0209676_1000530 3300025292 Bacteria 59517
18 Ga0209025_1006662 3300025294 Bacteria 8873
19 Ga0209025_1048429 3300025294 Bacteria 1723
20 Ga0207426_1005813 3300025302 Bacteria 5523
21 Ga0207696_1010025 3300025711 Bacteria 3497
22 Ga0207713_1016976 3300025735 Bacteria 3673
23 Ga0307416_100040924 3300032002 Bacteria 3605
24 Ga0439439_0000083 3300041406 Bacteria 12488
25 Ga0439449_0001466 3300042007 Bacteria 9250
26 Ga0439462_0000771 3300042015 Bacteria 6665
27 Ga0450904_000042 3300042139 Bacteria 28290
28 Ga0496102_0018286 3300048905 Bacteria 6157
29 Ga0496103_0017389 3300048906 Bacteria 4303
30 Ga0496104_0000578 3300048907 Bacteria 31258
31 Ga0496105_0018636 3300048908 Bacteria 5586
32 Ga0496106_0005201 3300048909 Bacteria 9637
33 Ga0496107_0016768 3300048910 Bacteria 5149
34 Ga0496108_0040505 3300048911 Bacteria 3884
35 Ga0496109_0000354 3300048912 Bacteria 42658
36 Ga0496110_0015468 3300048913 Bacteria 6351
37 Ga0496110_0026849 3300048913 Bacteria 4930
38 Ga0496111_0002283 3300048914 Bacteria 11513
39 Ga0496112_0013974 3300048915 Bacteria 7430
40 Ga0496116_0001592 3300048919 Bacteria 24959
41 Ga0496116_0002198 3300048919 Bacteria 20778
42 Ga0496116_0012005 3300048919 Bacteria 7110
43 Ga0496116_0038819 3300048919 Bacteria 3301
44 Ga0496116_0051341 3300048919 Bacteria 2740
45 Ga0496119_0007191 3300048922 Bacteria 10085
46 Ga0496119_0050768 3300048922 Bacteria 2553
47 Ga0496120_0001765 3300048923 Bacteria 24369
48 Ga0496122_0021975 3300048925 Bacteria 5687
49 Ga0496122_0094338 3300048925 Unclassified 2026
50 Ga0496124_0000207 3300048927 Bacteria 116491
51 Ga0496124_0001526 3300048927 Bacteria 33706
52 Ga0496125_0004357 3300048928 Bacteria 16406
53 Ga0496126_0002760 3300048929 Bacteria 23162
54 Ga0496126_0007608 3300048929 Bacteria 11831
55 Ga0496126_0011127 3300048929 Bacteria 9344
56 Ga0501295_009559 3300049518 Bacteria 1496
57 Ga0501315_001853 3300049531 Bacteria 1892
58 Ga0501217_004180 3300049661 Bacteria 2959
59 2512730776 2512564039 Bacteria 8739048
60 2524186680 2524023129 Bacteria 6762600
61 2587740157 2585428059 Bacteria 8696589
62 2595316855 2593339198 Bacteria 7267884
63 2672334474 2671180330 Bacteria 5521719
64 2673817130 2671180694 Bacteria 7506943
65 2673822403 2671180694 Bacteria 7506943
66 2686996983 2684623153 Bacteria 3878815
67 2687498290 2687453109 Bacteria 3860091
68 2738814546 2738541295 Bacteria 5730091
69 2738838514 2738541299 Bacteria 4020721
70 2739231844 2738543010 Bacteria 5583595
71 2791215644 2788500588 Bacteria 4584915
72 2793183580 2791355222 Bacteria 5898266
73 2808870904 2808606364 Bacteria 4465927
74 2812316182 2811994870 Bacteria 3776934
75 2816863319 2816332186 Bacteria 5331395
76 2817480197 2816332295 Bacteria 4352468
77 2819627161 2818991451 Bacteria 4697364
78 2819671348 2818991459 Bacteria 8736032
79 2819675027 2818991459 Bacteria 8736032
80 2821117592 2821111986 Bacteria 6894338
81 2823528139 2823526263 Bacteria 3765752
82 2831905290 2831905167 Bacteria 3319172
83 2842685793 2842682962 Bacteria 5589973
84 2842884939 2842882022 Bacteria 6158489
85 2849140204 2849139964 Bacteria 5613304
86 2852675843 2852673933 Bacteria 3347676
87 2857455249 2857453340 Bacteria 8090534
88 2857457348 2857453340 Bacteria 8090534
89 2857465085 2857460504 Bacteria 5194327
90 2857477122 2857472729 Bacteria 6568124
91 2857585008 2857581216 Bacteria 5522813
92 2857606808 2857604169 Bacteria 5111450
93 2857612903 2857609550 Bacteria 3753890
94 2864738197 2864733723 Bacteria 6770668
95 2864738448 2864733723 Bacteria 6770668
96 2865000482 2864997549 Bacteria 5139696
97 2865004619 2865002811 Bacteria 6333767
98 2865005824 2865002811 Bacteria 6333767
99 2884815850 2884811622 Bacteria 5552861
100 2884837875 2884836552 Bacteria 5219991
101 2884854167 2884852848 Bacteria 5221161
102 2885528312 2885526491 Bacteria 7164189
103 2888581897 2888578766 Bacteria 6743310
104 2889042994 2889042446 Bacteria 7618936
105 2889053534 2889049205 Bacteria 7524325
106 2889295930 2889295896 Bacteria 4704906
107 2896154716 2896154374 Bacteria 5221518
108 2904114690 2904113452 Bacteria 7796941
109 2904168632 2904162308 Bacteria 7086713
110 2904495944 2904490793 Bacteria 7046938
111 2904527383 2904524088 Bacteria 5887454
112 2904609321 2904606771 Bacteria 4684500
113 2904756420 2904755435 Bacteria 7986759
114 2904760834 2904755435 Bacteria 7986759
115 2919144004 2919143609 Bacteria 6219228
116 2919164782 2919160200 Bacteria 6929020
117 2919431794 2919425241 Bacteria 8055701
118 2919520504 2919517244 Bacteria 5858162
119 2919724766 2919720352 Bacteria 5986006
120 2919730537 2919726948 Bacteria 3696050
121 2925330808 2925326138 Bacteria 9652120
122 2925331480 2925326138 Bacteria 9652120
123 2928512410 2928510474 Bacteria 4815308
124 2931386419 2931384279 Bacteria 7299545
125 2939595815 2939593269 Bacteria 4798695
126 2939681246 2939679117 Bacteria 6921672
127 2939684306 2939679117 Bacteria 6921672
128 2945995013 2945991243 Bacteria 7008369
129 2946057718 2946053406 Bacteria 6978655
130 2954774351 2954773129 Bacteria 3741715
131 2964379460 2964375228 Bacteria 4909004
132 2969769939 2969765954 Bacteria 4216713
133 2971412181 2971410472 Bacteria 8311090
134 2971412416 2971410472 Bacteria 8311090
135 2980128511 2980125574 Bacteria 5567337
136 2980129722 2980125574 Bacteria 5567337
137 2980187473 2980182181 Bacteria 9454109
138 2981287290 2981284811 Bacteria 4641497
139 2981294217 2981289755 Bacteria 4641509
140 2981983294 2981980479 Bacteria 4641628
141 2981988209 2981985349 Bacteria 4641497
142 3001270237 3001267043 Bacteria 4823521
143 3001273348 3001272096 Bacteria 4729684
144 3006829202 3006826541 Bacteria 4678913
145 3006860536 3006858327 Bacteria 4317835
146 3006970197 3006969106 Bacteria 4739423
147 3006974121 3006973921 Bacteria 4423788
148 3006979484 3006978542 Bacteria 5328100
149 3006985417 3006984091 Bacteria 4207523
150 3006986885 3006984091 Bacteria 4207523
151 3006990184 3006988479 Bacteria 4767936
152 8002318650 8002317523 Bacteria 8051857
153 8022950811 8022948649 Bacteria 5366783
154 8046998208 8046991243 Bacteria 8497463
155 8054797909 8054795415 Bacteria 9785225
156 8055536819 8055531788 Bacteria 5249694
157 8055637175 8055632911 Bacteria 5283357
158 8056533113 8056533031 Bacteria 8964429
159 8057474352 8057473075 Bacteria 5892720
160 8057636245 8057632132 Bacteria 4726859
161 8057637058 8057632132 Bacteria 4726859
162 8057981841 8057977335 Bacteria 5694872
163 Ga0495583_0001925
164 rootL2_10252695
165 Ga0006562J51391_1008264
166 Ga0055538_1000179
167 Ga0055541_1002800
168 Ga0105244_10098920
169 Ga0105242_10175779
170 Ga0105246_10000132
171 Ga0157377_10075302
172 Ga0209784_100129
173 Ga0209566_100305
174 Ga0209566_100314
175 Ga0209566_103315
176 Ga0209147_100136
177 Ga0209673_1003250
178 Ga0209675_1000755
179 Ga0209676_1000530
180 Ga0209025_1006662
181 Ga0209025_1048429
182 Ga0207426_1005813
183 Ga0207696_1010025
184 Ga0207713_1016976
185 Ga0307416_100040924
186 Ga0439439_0000083
187 Ga0439449_0001466
188 Ga0439462_0000771
189 Ga0450904_000042
190 Ga0496102_0018286
191 Ga0496103_0017389
192 Ga0496104_0000578
193 Ga0496105_0018636
194 Ga0496106_0005201
195 Ga0496107_0016768
196 Ga0496108_0040505
197 Ga0496109_0000354
198 Ga0496110_0015468
199 Ga0496110_0026849
200 Ga0496111_0002283
201 Ga0496112_0013974
202 Ga0496116_0001592
203 Ga0496116_0002198
204 Ga0496116_0012005
205 Ga0496116_0038819
206 Ga0496116_0051341
207 Ga0496119_0007191
208 Ga0496119_0050768
209 Ga0496120_0001765
210 Ga0496122_0021975
211 Ga0496122_0094338
212 Ga0496124_0000207
213 Ga0496124_0001526
214 Ga0496125_0004357
215 Ga0496126_0002760
216 Ga0496126_0007608
217 Ga0496126_0011127
218 Ga0501295_009559
219 Ga0501315_001853
220 Ga0501217_004180
221 2512730776
222 2524186680
223 2587740157
224 2595316855
225 2672334474
226 2673817130
227 2673822403
228 2686996983
229 2687498290
230 2738814546
231 2738838514
232 2739231844
233 2791215644
234 2793183580
235 2808870904
236 2812316182
237 2816863319
238 2817480197
239 2819627161
240 2819671348
241 2819675027
242 2821117592
243 2823528139
244 2831905290
245 2842685793
246 2842884939
247 2849140204
248 2852675843
249 2857455249
250 2857457348
251 2857465085
252 2857477122
253 2857585008
254 2857606808
255 2857612903
256 2864738197
257 2864738448
258 2865000482
259 2865004619
260 2865005824
261 2884815850
262 2884837875
263 2884854167
264 2885528312
265 2888581897
266 2889042994
267 2889053534
268 2889295930
269 2896154716
270 2904114690
271 2904168632
272 2904495944
273 2904527383
274 2904609321
275 2904756420
276 2904760834
277 2919144004
278 2919164782
279 2919431794
280 2919520504
281 2919724766
282 2919730537
283 2925330808
284 2925331480
285 2928512410
286 2931386419
287 2939595815
288 2939681246
289 2939684306
290 2945995013
291 2946057718
292 2954774351
293 2964379460
294 2969769939
295 2971412181
296 2971412416
297 2980128511
298 2980129722
299 2980187473
300 2981287290
301 2981294217
302 2981983294
303 2981988209
304 3001270237
305 3001273348
306 3006829202
307 3006860536
308 3006970197
309 3006974121
310 3006979484
311 3006985417
312 3006986885
313 3006990184
314 8002318650
315 8022950811
316 8046998208
317 8054797909
318 8055536819
319 8055637175
320 8056533113
321 8057474352
322 8057636245
323 8057637058
324 8057981841

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02040

ArsB

Arsenical pump membrane protein

86

394

0.99

PF02040

ArsB

Arsenical pump membrane protein

3

88

0.97

PF03600

CitMHS

Citrate transporter

87

337

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7jsj-assembly1.cif.gz_A structure of the nact-pf2 complex 0.7465 3 423
6ol1-assembly1.cif.gz_B structure of vcindy in complex with succinate 0.7395 3 426
4f35-assembly1.cif.gz_C crystal structure of a bacterial dicarboxylate/sodium symporter 0.738 3 432
7jsj-assembly1.cif.gz_A structure of the nact-pf2 complex 0.7282 3 423
6ol1-assembly1.cif.gz_B structure of vcindy in complex with succinate 0.7147 3 426
ID Description Score Start End Superfamily
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.9302 6 425 1.20.1530.20
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.9214 6 425 1.20.1530.20
af_O01824_12_316_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.4379 147 222 3.40.1190.20
af_A0A1B0GXA3_1_166_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2883 102 253 1.20.1070.10
af_Q9UHV5_150_310_1.20.870.10 Mainly Alpha;Up-down Bundle;Son of sevenless (SoS) protein; Chain S, domain 1;Son of sevenless (SoS) protein Chain: S domain 1 0.2764 75 222 1.20.870.10
ID Description Score Start End GO Terms
AF-A0A2S1H1I3-F1-model_v4 Arsenical pump membrane protein 0.9937 3 430 GO:0005886
GO:0015105
GO:0046685
AF-A0A380E390-F1-model_v4 Arsenical pump membrane protein 0.9935 62 430 GO:0005886
GO:0015105
GO:0046685
AF-A0A837EDI0-F1-model_v4 deleted 0.9928 3 432
AF-A0A4S0LXV1-F1-model_v4 deleted 0.9925 311 430
AF-A0A1B9APU0-F1-model_v4 Arsenical pump membrane protein 0.9922 1 432 GO:0005886
GO:0015105
GO:0046685

Map