F239221

General Info

Members Datasets Scaffolds Average Seq Length
162 89 324 172

Family's Representative Sequence

Representative Sequence 3300010159|Ga0099796_10052962|Ga0099796_100529622
Length 182
Sequence MVKAYAVRGALCAGLLLLAPAMLQAQDVIGIPVGETPPAVTLESLNGDSVALSQWIGKKPVIVEFWATWCPICAELLPRMEAAQKKFGDRAEFLVVAVAVNQSKNSVRRHLERHPMPFTFLWDGNGSAVRAFDAPSTSYIAVMDPSGKVVYTGVGADQNIEAAIETALRRPIAAPSPPLRRP

Samples

Sample ID Description Type Environment
1 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
5 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
26 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
29 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
41 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
42 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
43 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
44 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
45 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
46 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
47 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
48 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
49 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
50 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
51 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
52 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
53 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
54 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
55 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
56 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
57 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
58 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
59 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
60 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
61 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
62 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
63 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
64 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
65 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
66 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
67 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
68 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
69 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
70 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
71 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
72 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
73 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
74 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
75 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
76 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
77 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
78 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
79 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
80 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
81 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
82 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
83 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
84 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
85 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
86 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
87 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
88 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
89 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.7
Rhizosphere 96.3
Stem 0
Stem Tuber 0
Unclassified 19.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099796_10052962 3300010159 Bacteria 1415
2 Ga0070680_100725234 3300005336 Bacteria 855
3 Ga0070691_10053825 3300005341 Bacteria 1926
4 Ga0070692_10116627 3300005345 Bacteria 1484
5 Ga0070703_10199992 3300005406 Unclassified 783
6 Ga0070705_100006928 3300005440 Bacteria 5568
7 Ga0070705_100008994 3300005440 Bacteria 4957
8 Ga0070694_100001473 3300005444 Bacteria 13795
9 Ga0070694_100022027 3300005444 Unclassified 4080
10 Ga0070694_100026981 3300005444 Bacteria 3726
11 Ga0070694_100247243 3300005444 Bacteria 1348
12 Ga0070694_100609720 3300005444 Bacteria 880
13 Ga0068867_100063086 3300005459 Bacteria 2754
14 Ga0070706_100009005 3300005467 Bacteria 9291
15 Ga0070706_100305316 3300005467 Bacteria 1485
16 Ga0070707_100044181 3300005468 Bacteria 4265
17 Ga0070707_100046586 3300005468 Unclassified 4149
18 Ga0070707_100781927 3300005468 Bacteria 918
19 Ga0070698_100173645 3300005471 Bacteria 2095
20 Ga0070698_100477310 3300005471 Bacteria 1184
21 Ga0070699_100059399 3300005518 Bacteria 3312
22 Ga0070699_100084986 3300005518 Bacteria 2762
23 Ga0070699_100376381 3300005518 Bacteria 1281
24 Ga0070699_100568667 3300005518 Bacteria 1032
25 Ga0070679_100104043 3300005530 Bacteria 2825
26 Ga0070697_100006466 3300005536 Bacteria 9070
27 Ga0070697_100042804 3300005536 Bacteria 3665
28 Ga0070697_100384995 3300005536 Bacteria 1215
29 Ga0070695_100001929 3300005545 Bacteria 11746
30 Ga0070695_100030898 3300005545 Bacteria 3337
31 Ga0070695_100031355 3300005545 Bacteria 3315
32 Ga0070695_100752180 3300005545 Unclassified 777
33 Ga0070696_100000254 3300005546 Bacteria 32244
34 Ga0070696_100002939 3300005546 Bacteria 11317
35 Ga0070696_100016121 3300005546 Bacteria 5025
36 Ga0070696_100083363 3300005546 Bacteria 2268
37 Ga0070704_100002413 3300005549 Bacteria 10494
38 Ga0070704_100005187 3300005549 Bacteria 7577
39 Ga0070704_100034353 3300005549 Bacteria 3438
40 Ga0070704_100079700 3300005549 Bacteria 2406
41 Ga0070704_100120785 3300005549 Unclassified 2012
42 Ga0070704_100275099 3300005549 Bacteria 1393
43 Ga0070704_100639100 3300005549 Bacteria 938
44 Ga0070702_100845797 3300005615 Unclassified 712
45 Ga0081539_10051058 3300005985 Bacteria 2334
46 Ga0075428_100008994 3300006844 Bacteria 11081
47 Ga0075428_100064481 3300006844 Bacteria 4012
48 Ga0075428_100151694 3300006844 Bacteria 2518
49 Ga0075431_100071518 3300006847 Unclassified 3579
50 Ga0075431_100091892 3300006847 Bacteria 3132
51 Ga0075433_10222468 3300006852 Bacteria 1677
52 Ga0075433_10248196 3300006852 Unclassified 1579
53 Ga0075433_10334712 3300006852 Unclassified 1338
54 Ga0075433_10677719 3300006852 Unclassified 903
55 Ga0075434_100210553 3300006871 Unclassified 1964
56 Ga0075434_100403254 3300006871 Bacteria 1388
57 Ga0075436_100115761 3300006914 Bacteria 1873
58 Ga0075436_100178898 3300006914 Bacteria 1499
59 Ga0075436_100215094 3300006914 Bacteria 1363
60 Ga0075436_100365473 3300006914 Unclassified 1041
61 Ga0075435_100006128 3300007076 Bacteria 8474
62 Ga0075435_100039696 3300007076 Unclassified 3757
63 Ga0075435_100042157 3300007076 Bacteria 3650
64 Ga0075435_100384702 3300007076 Bacteria 1205
65 Ga0099794_10000032 3300007265 Bacteria 57885
66 Ga0099794_10141592 3300007265 Unclassified 1218
67 Ga0099794_10200583 3300007265 Bacteria 1022
68 Ga0114129_10580044 3300009147 Bacteria 1455
69 Ga0114129_13030506 3300009147 Bacteria 551
70 Ga0157378_10253409 3300013297 Bacteria 1686
71 Ga0182008_10287657 3300014497 Bacteria 857
72 Ga0157379_10037580 3300014968 Bacteria 4318
73 Ga0207653_10000392 3300025885 Bacteria 19794
74 Ga0207684_10184659 3300025910 Bacteria 1798
75 Ga0207684_10263532 3300025910 Bacteria 1487
76 Ga0207660_10246798 3300025917 Bacteria 1408
77 Ga0207660_10611217 3300025917 Bacteria 888
78 Ga0207662_10083249 3300025918 Bacteria 1955
79 Ga0207652_10161953 3300025921 Bacteria 2006
80 Ga0207652_10261818 3300025921 Bacteria 1560
81 Ga0207646_10024680 3300025922 Bacteria 5506
82 Ga0207646_10124486 3300025922 Bacteria 2317
83 Ga0207646_11014836 3300025922 Bacteria 733
84 Ga0207708_10205939 3300026075 Bacteria 1571
85 Ga0207648_10086173 3300026089 Bacteria 2740
86 Ga0209588_1000093 3300027671 Bacteria 28346
87 Ga0209588_1000243 3300027671 Bacteria 14530
88 Ga0209588_1063802 3300027671 Bacteria 1190
89 Ga0307409_100673844 3300031995 Unclassified 1031
90 Ga0307409_101025301 3300031995 Unclassified 844
91 Ga0307409_101773319 3300031995 Bacteria 646
92 Ga0307415_101405924 3300032126 Bacteria 664
93 Ga0316583_10000149 3300032133 Bacteria 16832
94 Ga0373937_0111068 3300036401 Bacteria 2550
95 Ga0439446_0124947 3300042156 Unclassified 831
96 Ga0451577_0084041 3300042876 Unclassified 2840
97 Ga0453683_0039696 3300044673 Unclassified 2958
98 Ga0453683_0097594 3300044673 Unclassified 1844
99 Ga0453683_0297582 3300044673 Bacteria 1032
100 Ga0453683_0301445 3300044673 Bacteria 1025
101 Ga0453684_0523317 3300044712 Unclassified 1310
102 Ga0451576_0002660 3300045051 Bacteria 26036
103 Ga0451576_0215774 3300045051 Unclassified 2003
104 Ga0451576_0716154 3300045051 Unclassified 1051
105 Ga0451576_0832958 3300045051 Unclassified 968
106 Ga0451576_1111686 3300045051 Bacteria 827
107 Ga0451576_1278881 3300045051 Bacteria 765
108 Ga0495592_0175792 3300046454 Bacteria 1462
109 Ga0495603_0211747 3300046455 Bacteria 1119
110 Ga0495629_0590404 3300046459 Bacteria 743
111 Ga0495580_0024827 3300046472 Bacteria 4383
112 Ga0495582_0055811 3300046473 Bacteria 2177
113 Ga0495664_0018529 3300046477 Bacteria 3991
114 Ga0495594_0006557 3300046499 Bacteria 5988
115 Ga0495618_0037773 3300046514 Bacteria 3033
116 Ga0495630_0009255 3300046517 Bacteria 7082
117 Ga0495666_0011391 3300046526 Bacteria 4437
118 Ga0495640_0036977 3300046533 Bacteria 3447
119 Ga0495586_0004692 3300046535 Bacteria 7306
120 Ga0495586_0071363 3300046535 Bacteria 1897
121 Ga0495634_0136156 3300046642 Bacteria 1562
122 Ga0495635_0371326 3300046663 Bacteria 953
123 Ga0495647_0158680 3300046681 Bacteria 973
124 Ga0495613_0068776 3300046689 Bacteria 2582
125 Ga0495581_0134697 3300047315 Bacteria 1440
126 Ga0495636_0074429 3300047318 Bacteria 1455
127 Ga0495674_0296550 3300047319 Bacteria 1321
128 Ga0495676_0186608 3300047321 Bacteria 1449
129 Ga0495680_0071005 3300047322 Bacteria 2652
130 Ga0495614_0149783 3300048089 Bacteria 1040
131 Ga0496107_0454135 3300048910 Bacteria 952
132 Ga0496108_0015490 3300048911 Bacteria 6218
133 Ga0496110_0012716 3300048913 Bacteria 6927
134 Ga0496111_0032678 3300048914 Bacteria 3710
135 Ga0496112_0258133 3300048915 Bacteria 1692
136 Ga0496113_0012705 3300048916 Bacteria 5668
137 Ga0501076_0682882 3300049592 Unclassified 848
138 Ga0501079_0471131 3300049741 Bacteria 987
139 Ga0501083_0313255 3300049744 Bacteria 1021
140 Ga0501262_006750 3300049759 Unclassified 1378
141 nmdc:mga05p37_726728_c1 3300050507 Bacteria 1099
142 nmdc:mga05p37_937122_c1 3300050507 Bacteria 929
143 nmdc:mga06r32_140265_c1 3300050510 Bacteria 2393
144 nmdc:mga06r32_203929_c1 3300050510 Bacteria 1965
145 nmdc:mga0n895_22972_c1 3300050512 Bacteria 5854
146 nmdc:mga0n895_389077_c1 3300050512 Unclassified 1411
147 nmdc:mga0n895_8645_c1 3300050512 Bacteria 8837
148 nmdc:mga0rr50_14117_c1 3300050513 Bacteria 5228
149 nmdc:mga0rr50_475747_c1 3300050513 Bacteria 1061
150 nmdc:mga0rr50_4852_c1 3300050513 Bacteria 7953
151 nmdc:mga0rr50_77699_c2 3300050513 Bacteria 1481
152 nmdc:mga08x19_119299_c1 3300050514 Unclassified 1767
153 nmdc:mga08x19_148876_c1 3300050514 Bacteria 1584
154 nmdc:mga08x19_196528_c1 3300050514 Bacteria 1381
155 nmdc:mga08x19_28505_c1 3300050514 Bacteria 3497
156 nmdc:mga08x19_80255_c1 3300050514 Bacteria 2141
157 nmdc:mga0a205_114717_c1 3300050515 Bacteria 2593
158 nmdc:mga0a205_203250_c1 3300050515 Unclassified 1871
159 nmdc:mga0a205_400877_c1 3300050515 Unclassified 1236
160 Ga0501084_0527587 3300054114 Unclassified 998
161 Ga0501082_0073467 3300060353 Bacteria 2946
162 Ga0530510_0719729 3300061734 Bacteria 761
163 Ga0099796_10052962
164 Ga0070680_100725234
165 Ga0070691_10053825
166 Ga0070692_10116627
167 Ga0070703_10199992
168 Ga0070705_100006928
169 Ga0070705_100008994
170 Ga0070694_100001473
171 Ga0070694_100022027
172 Ga0070694_100026981
173 Ga0070694_100247243
174 Ga0070694_100609720
175 Ga0068867_100063086
176 Ga0070706_100009005
177 Ga0070706_100305316
178 Ga0070707_100044181
179 Ga0070707_100046586
180 Ga0070707_100781927
181 Ga0070698_100173645
182 Ga0070698_100477310
183 Ga0070699_100059399
184 Ga0070699_100084986
185 Ga0070699_100376381
186 Ga0070699_100568667
187 Ga0070679_100104043
188 Ga0070697_100006466
189 Ga0070697_100042804
190 Ga0070697_100384995
191 Ga0070695_100001929
192 Ga0070695_100030898
193 Ga0070695_100031355
194 Ga0070695_100752180
195 Ga0070696_100000254
196 Ga0070696_100002939
197 Ga0070696_100016121
198 Ga0070696_100083363
199 Ga0070704_100002413
200 Ga0070704_100005187
201 Ga0070704_100034353
202 Ga0070704_100079700
203 Ga0070704_100120785
204 Ga0070704_100275099
205 Ga0070704_100639100
206 Ga0070702_100845797
207 Ga0081539_10051058
208 Ga0075428_100008994
209 Ga0075428_100064481
210 Ga0075428_100151694
211 Ga0075431_100071518
212 Ga0075431_100091892
213 Ga0075433_10222468
214 Ga0075433_10248196
215 Ga0075433_10334712
216 Ga0075433_10677719
217 Ga0075434_100210553
218 Ga0075434_100403254
219 Ga0075436_100115761
220 Ga0075436_100178898
221 Ga0075436_100215094
222 Ga0075436_100365473
223 Ga0075435_100006128
224 Ga0075435_100039696
225 Ga0075435_100042157
226 Ga0075435_100384702
227 Ga0099794_10000032
228 Ga0099794_10141592
229 Ga0099794_10200583
230 Ga0114129_10580044
231 Ga0114129_13030506
232 Ga0157378_10253409
233 Ga0182008_10287657
234 Ga0157379_10037580
235 Ga0207653_10000392
236 Ga0207684_10184659
237 Ga0207684_10263532
238 Ga0207660_10246798
239 Ga0207660_10611217
240 Ga0207662_10083249
241 Ga0207652_10161953
242 Ga0207652_10261818
243 Ga0207646_10024680
244 Ga0207646_10124486
245 Ga0207646_11014836
246 Ga0207708_10205939
247 Ga0207648_10086173
248 Ga0209588_1000093
249 Ga0209588_1000243
250 Ga0209588_1063802
251 Ga0307409_100673844
252 Ga0307409_101025301
253 Ga0307409_101773319
254 Ga0307415_101405924
255 Ga0316583_10000149
256 Ga0373937_0111068
257 Ga0439446_0124947
258 Ga0451577_0084041
259 Ga0453683_0039696
260 Ga0453683_0097594
261 Ga0453683_0297582
262 Ga0453683_0301445
263 Ga0453684_0523317
264 Ga0451576_0002660
265 Ga0451576_0215774
266 Ga0451576_0716154
267 Ga0451576_0832958
268 Ga0451576_1111686
269 Ga0451576_1278881
270 Ga0495592_0175792
271 Ga0495603_0211747
272 Ga0495629_0590404
273 Ga0495580_0024827
274 Ga0495582_0055811
275 Ga0495664_0018529
276 Ga0495594_0006557
277 Ga0495618_0037773
278 Ga0495630_0009255
279 Ga0495666_0011391
280 Ga0495640_0036977
281 Ga0495586_0004692
282 Ga0495586_0071363
283 Ga0495634_0136156
284 Ga0495635_0371326
285 Ga0495647_0158680
286 Ga0495613_0068776
287 Ga0495581_0134697
288 Ga0495636_0074429
289 Ga0495674_0296550
290 Ga0495676_0186608
291 Ga0495680_0071005
292 Ga0495614_0149783
293 Ga0496107_0454135
294 Ga0496108_0015490
295 Ga0496110_0012716
296 Ga0496111_0032678
297 Ga0496112_0258133
298 Ga0496113_0012705
299 Ga0501076_0682882
300 Ga0501079_0471131
301 Ga0501083_0313255
302 Ga0501262_006750
303 nmdc:mga05p37_726728_c1
304 nmdc:mga05p37_937122_c1
305 nmdc:mga06r32_140265_c1
306 nmdc:mga06r32_203929_c1
307 nmdc:mga0n895_22972_c1
308 nmdc:mga0n895_389077_c1
309 nmdc:mga0n895_8645_c1
310 nmdc:mga0rr50_14117_c1
311 nmdc:mga0rr50_475747_c1
312 nmdc:mga0rr50_4852_c1
313 nmdc:mga0rr50_77699_c2
314 nmdc:mga08x19_119299_c1
315 nmdc:mga08x19_148876_c1
316 nmdc:mga08x19_196528_c1
317 nmdc:mga08x19_28505_c1
318 nmdc:mga08x19_80255_c1
319 nmdc:mga0a205_114717_c1
320 nmdc:mga0a205_203250_c1
321 nmdc:mga0a205_400877_c1
322 Ga0501084_0527587
323 Ga0501082_0073467
324 Ga0530510_0719729

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00578

AhpC-TSA

AhpC/TSA family

33

152

0.91

PF13905

Thioredoxin_8

Thioredoxin-like

57

149

0.89

PF08534

Redoxin

Redoxin

32

168

0.86

PF00085

Thioredoxin

Thioredoxin

47

141

0.72

Structural Annotation

Top 5 Hits

ID Description Score Start End
1st9-assembly2.cif.gz_B crystal structure of a soluble domain of resa in the oxidised form 0.8817 35 167
7djk-assembly1.cif.gz_A structure of four truncated and mutated forms of quenching protein 0.8721 35 175
3kh9-assembly1.cif.gz_A crystal structure of the periplasmic soluble domain of oxidized ccmg from pseudomonas aeruginosa 0.8716 33 160
2cvb-assembly1.cif.gz_A crystal structure of a thioredoxin-like protein from thermus thermophilus hb8 0.8714 31 153
1st9-assembly2.cif.gz_B crystal structure of a soluble domain of resa in the oxidised form 0.8637 35 167
ID Description Score Start End Superfamily
1st9A00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8815 34 167 3.40.30.10
1st9A00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8578 34 167 3.40.30.10
af_F1R7E6_86_254_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8557 32 155 3.40.30.10
af_P47938_1_107_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8533 58 157 3.40.30.10
2ywoA00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.8526 31 153 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A2V7M859-F1-model_v4 Thioredoxin domain-containing protein 0.993 52 175 GO:0016491
GO:0017004
AF-A0A2V7TGX2-F1-model_v4 Thioredoxin domain-containing protein 0.9882 23 168 GO:0016491
GO:0017004
AF-A0A3B8QAR0-F1-model_v4 Thioredoxin domain-containing protein 0.9842 43 167 GO:0016491
GO:0017004
AF-A0A1Q6ZWY3-F1-model_v4 Thioredoxin domain-containing protein 0.9789 29 169 GO:0016491
GO:0017004
AF-A0A2V7JVD3-F1-model_v4 Thioredoxin domain-containing protein 0.9766 24 167 GO:0016491
GO:0017004

Map