F238569
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 162 | 120 | 162 | 191 |
Family's Representative Sequence
| Representative Sequence | 3300005345|Ga0070692_10347698|Ga0070692_103476981 |
| Length | 233 |
| Sequence | VLTAAGLKPADARTTVQRSATWGLPDGSISTRERHALHSKLSRRARLRVLALSLSAAVLTAVVGGSSLAGAAETAVPETGTTDVIKIELKKGKLNFFGPETVAYGDQLEVENETDPKQVGPHTFSLVTKGSIPKTANARKNCFTPKHICLAVAKWHGFNPKTEKITTKLVKAGPEGWSTMGNSTGKKGDSWVTEKKGESLTQQVTAAPGTTLYFQCAIHPWMHGKVTVTPATA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003659 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 2 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 5 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 7 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 8 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 11 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 12 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 15 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 17 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 25 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 26 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 27 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 28 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 29 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 30 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 31 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 32 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 33 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 34 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 49 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 72 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 73 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046557 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 104 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 105 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 106 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 107 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 108 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 109 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 110 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 112 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 113 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 114 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 115 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300053083 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.38 |
| Metatranscriptomes | 0.62 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 9.26 |
| Rhizosphere | 90.74 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25404J52841_10002317 | 3300003659 | Bacteria | 3583 |
| 2 | Ga0065707_10197486 | 3300005295 | Bacteria | 1328 |
| 3 | Ga0070683_100002841 | 3300005329 | Bacteria | 13861 |
| 4 | Ga0070683_100020405 | 3300005329 | Bacteria | 5897 |
| 5 | Ga0070690_100023378 | 3300005330 | Bacteria | 3791 |
| 6 | Ga0070666_10146126 | 3300005335 | Bacteria | 1648 |
| 7 | Ga0070682_100000080 | 3300005337 | Bacteria | 85683 |
| 8 | Ga0070689_100233690 | 3300005340 | Bacteria | 1512 |
| 9 | Ga0070691_10000105 | 3300005341 | Bacteria | 24902 |
| 10 | Ga0070661_100000005 | 3300005344 | Bacteria | 220455 |
| 11 | Ga0070692_10347698 | 3300005345 | Unclassified | 920 |
| 12 | Ga0070688_100000798 | 3300005365 | Bacteria | 15528 |
| 13 | Ga0070688_100000843 | 3300005365 | Bacteria | 15198 |
| 14 | Ga0070688_100015073 | 3300005365 | Bacteria | 4389 |
| 15 | Ga0070711_100001483 | 3300005439 | Bacteria | 12864 |
| 16 | Ga0070678_100324278 | 3300005456 | Bacteria | 1316 |
| 17 | Ga0070685_10000521 | 3300005466 | Bacteria | 21868 |
| 18 | Ga0070685_10000734 | 3300005466 | Bacteria | 17874 |
| 19 | Ga0070684_100004932 | 3300005535 | Bacteria | 10182 |
| 20 | Ga0070684_100355915 | 3300005535 | Unclassified | 1347 |
| 21 | Ga0068853_100055641 | 3300005539 | Bacteria | 3410 |
| 22 | Ga0070672_100000004 | 3300005543 | Bacteria | 129970 |
| 23 | Ga0070686_100408614 | 3300005544 | Bacteria | 1034 |
| 24 | Ga0070695_100162188 | 3300005545 | Bacteria | 1570 |
| 25 | Ga0070665_100001712 | 3300005548 | Bacteria | 25155 |
| 26 | Ga0070665_100062314 | 3300005548 | Bacteria | 3740 |
| 27 | Ga0068855_100961807 | 3300005563 | Bacteria | 899 |
| 28 | Ga0068854_100000212 | 3300005578 | Bacteria | 39011 |
| 29 | Ga0068854_100205332 | 3300005578 | Bacteria | 1551 |
| 30 | Ga0068856_100005839 | 3300005614 | Bacteria | 12131 |
| 31 | Ga0068852_100000467 | 3300005616 | Bacteria | 26599 |
| 32 | Ga0068866_10667573 | 3300005718 | Bacteria | 709 |
| 33 | Ga0068851_10002468 | 3300005834 | Bacteria | 8127 |
| 34 | Ga0068863_100020939 | 3300005841 | Bacteria | 6246 |
| 35 | Ga0068863_100152865 | 3300005841 | Bacteria | 2209 |
| 36 | Ga0068860_100156096 | 3300005843 | Bacteria | 2199 |
| 37 | Ga0081540_1000006 | 3300005983 | Bacteria | 208724 |
| 38 | Ga0081540_1073498 | 3300005983 | Bacteria | 1570 |
| 39 | Ga0070712_100001953 | 3300006175 | Bacteria | 12628 |
| 40 | Ga0068871_100630017 | 3300006358 | Bacteria | 977 |
| 41 | Ga0075430_100043433 | 3300006846 | Bacteria | 3799 |
| 42 | Ga0068865_100000017 | 3300006881 | Bacteria | 109636 |
| 43 | Ga0105245_10000056 | 3300009098 | Bacteria | 124109 |
| 44 | Ga0105245_10019243 | 3300009098 | Bacteria | 5978 |
| 45 | Ga0105247_10154631 | 3300009101 | Unclassified | 1514 |
| 46 | Ga0105242_10000605 | 3300009176 | Bacteria | 28087 |
| 47 | Ga0105248_10000032 | 3300009177 | Bacteria | 201114 |
| 48 | Ga0105239_10020981 | 3300010375 | Bacteria | 7209 |
| 49 | Ga0105239_10231337 | 3300010375 | Bacteria | 2074 |
| 50 | Ga0157370_10229434 | 3300013104 | Bacteria | 1719 |
| 51 | Ga0157369_10000099 | 3300013105 | Bacteria | 120032 |
| 52 | Ga0157374_10755920 | 3300013296 | Bacteria | 987 |
| 53 | Ga0157378_10021651 | 3300013297 | Bacteria | 5653 |
| 54 | Ga0157372_10000473 | 3300013307 | Bacteria | 44380 |
| 55 | Ga0157380_10000028 | 3300014326 | Bacteria | 99836 |
| 56 | Ga0157380_10100769 | 3300014326 | Bacteria | 2405 |
| 57 | Ga0157379_10662639 | 3300014968 | Bacteria | 978 |
| 58 | Ga0157376_10010369 | 3300014969 | Bacteria | 6811 |
| 59 | Ga0163161_10206056 | 3300017792 | Bacteria | 1517 |
| 60 | Ga0206356_10633812 | 3300020070 | Bacteria | 1198 |
| 61 | Ga0207656_10001327 | 3300025321 | Bacteria | 8138 |
| 62 | Ga0207692_10419023 | 3300025898 | Bacteria | 838 |
| 63 | Ga0207705_10151443 | 3300025909 | Bacteria | 1738 |
| 64 | Ga0207693_10000853 | 3300025915 | Bacteria | 27203 |
| 65 | Ga0207663_10004129 | 3300025916 | Bacteria | 7190 |
| 66 | Ga0207649_10000005 | 3300025920 | Bacteria | 356179 |
| 67 | Ga0207687_10000007 | 3300025927 | Bacteria | 604185 |
| 68 | Ga0207687_10040647 | 3300025927 | Bacteria | 3189 |
| 69 | Ga0207664_10011020 | 3300025929 | Bacteria | 6405 |
| 70 | Ga0207686_10000032 | 3300025934 | Bacteria | 150341 |
| 71 | Ga0207670_10196986 | 3300025936 | Bacteria | 1528 |
| 72 | Ga0207704_10000025 | 3300025938 | Bacteria | 135523 |
| 73 | Ga0207691_10000020 | 3300025940 | Bacteria | 133465 |
| 74 | Ga0207711_10000020 | 3300025941 | Bacteria | 363325 |
| 75 | Ga0207661_10002066 | 3300025944 | Bacteria | 13820 |
| 76 | Ga0207661_10002697 | 3300025944 | Bacteria | 12211 |
| 77 | Ga0207661_10016037 | 3300025944 | Bacteria | 5524 |
| 78 | Ga0207667_10087207 | 3300025949 | Bacteria | 3229 |
| 79 | Ga0207640_10000137 | 3300025981 | Bacteria | 54133 |
| 80 | Ga0207640_10180102 | 3300025981 | Bacteria | 1584 |
| 81 | Ga0207658_10062262 | 3300025986 | Bacteria | 2792 |
| 82 | Ga0207703_10078412 | 3300026035 | Bacteria | 2744 |
| 83 | Ga0207639_10047825 | 3300026041 | Unclassified | 3235 |
| 84 | Ga0207641_10005462 | 3300026088 | Bacteria | 10840 |
| 85 | Ga0207698_10000041 | 3300026142 | Bacteria | 97882 |
| 86 | Ga0268266_10000553 | 3300028379 | Bacteria | 52199 |
| 87 | Ga0268266_10070484 | 3300028379 | Bacteria | 3029 |
| 88 | Ga0466963_0000019 | 3300044694 | Bacteria | 56949 |
| 89 | Ga0466957_0003561 | 3300044842 | Bacteria | 8578 |
| 90 | Ga0495592_0007646 | 3300046454 | Bacteria | 8091 |
| 91 | Ga0495592_0117360 | 3300046454 | Bacteria | 1876 |
| 92 | Ga0495592_0170844 | 3300046454 | Bacteria | 1489 |
| 93 | Ga0495629_0001932 | 3300046459 | Bacteria | 16149 |
| 94 | Ga0495629_0140974 | 3300046459 | Unclassified | 1677 |
| 95 | Ga0495638_0109503 | 3300046460 | Unclassified | 1642 |
| 96 | Ga0495641_0005074 | 3300046461 | Bacteria | 9050 |
| 97 | Ga0495641_0044517 | 3300046461 | Bacteria | 2047 |
| 98 | Ga0495664_0195014 | 3300046477 | Bacteria | 1228 |
| 99 | Ga0495585_0315288 | 3300046492 | Bacteria | 766 |
| 100 | Ga0495608_0000585 | 3300046511 | Bacteria | 25014 |
| 101 | Ga0495628_0010432 | 3300046516 | Bacteria | 7892 |
| 102 | Ga0495628_0475512 | 3300046516 | Unclassified | 905 |
| 103 | Ga0495628_0556317 | 3300046516 | Archaea | 823 |
| 104 | Ga0495630_0000025 | 3300046517 | Bacteria | 152364 |
| 105 | Ga0495630_0000833 | 3300046517 | Bacteria | 21774 |
| 106 | Ga0495640_0012621 | 3300046533 | Bacteria | 6448 |
| 107 | Ga0495640_0019533 | 3300046533 | Bacteria | 4999 |
| 108 | Ga0495586_0000672 | 3300046535 | Bacteria | 19498 |
| 109 | Ga0495621_0004400 | 3300046539 | Bacteria | 3960 |
| 110 | Ga0495622_0000014 | 3300046557 | Bacteria | 182142 |
| 111 | Ga0495634_0002325 | 3300046642 | Bacteria | 15909 |
| 112 | Ga0495634_0097094 | 3300046642 | Bacteria | 1908 |
| 113 | Ga0495634_0166260 | 3300046642 | Unclassified | 1388 |
| 114 | Ga0495625_0000029 | 3300046660 | Bacteria | 244646 |
| 115 | Ga0495635_0000256 | 3300046663 | Bacteria | 34043 |
| 116 | Ga0495588_0000311 | 3300046674 | Bacteria | 33416 |
| 117 | Ga0495657_0040249 | 3300046675 | Bacteria | 3207 |
| 118 | Ga0495599_0269324 | 3300046678 | Bacteria | 1034 |
| 119 | Ga0495647_0000019 | 3300046681 | Bacteria | 78887 |
| 120 | Ga0495647_0002331 | 3300046681 | Bacteria | 5957 |
| 121 | Ga0495658_0004523 | 3300046683 | Bacteria | 6839 |
| 122 | Ga0495613_0000042 | 3300046689 | Bacteria | 130403 |
| 123 | Ga0495613_0000309 | 3300046689 | Bacteria | 44163 |
| 124 | Ga0495624_0000030 | 3300046690 | Bacteria | 91755 |
| 125 | Ga0495624_0000686 | 3300046690 | Bacteria | 26537 |
| 126 | Ga0495624_0027950 | 3300046690 | Bacteria | 3688 |
| 127 | Ga0495660_0292915 | 3300046810 | Unclassified | 740 |
| 128 | Ga0495604_0000038 | 3300047317 | Bacteria | 123703 |
| 129 | Ga0495604_0286290 | 3300047317 | Unclassified | 1111 |
| 130 | Ga0495674_0000020 | 3300047319 | Bacteria | 178465 |
| 131 | Ga0495676_0002782 | 3300047321 | Bacteria | 15729 |
| 132 | Ga0495676_0174898 | 3300047321 | Bacteria | 1508 |
| 133 | Ga0495680_0067536 | 3300047322 | Bacteria | 2733 |
| 134 | Ga0495686_0045321 | 3300047472 | Bacteria | 2783 |
| 135 | Ga0495602_0000228 | 3300048088 | Bacteria | 52649 |
| 136 | Ga0496100_0000049 | 3300048903 | Bacteria | 75590 |
| 137 | Ga0496101_0000010 | 3300048904 | Bacteria | 281990 |
| 138 | Ga0496102_0520173 | 3300048905 | Bacteria | 1112 |
| 139 | Ga0496103_0293369 | 3300048906 | Bacteria | 1046 |
| 140 | Ga0496106_0000018 | 3300048909 | Bacteria | 175028 |
| 141 | Ga0496107_0000032 | 3300048910 | Bacteria | 99848 |
| 142 | Ga0496108_0000045 | 3300048911 | Bacteria | 137416 |
| 143 | Ga0496109_0000032 | 3300048912 | Bacteria | 162984 |
| 144 | Ga0496109_0000252 | 3300048912 | Bacteria | 51599 |
| 145 | Ga0496111_0000225 | 3300048914 | Bacteria | 26948 |
| 146 | Ga0496113_0004715 | 3300048916 | Bacteria | 8414 |
| 147 | Ga0496113_0457506 | 3300048916 | Bacteria | 1025 |
| 148 | Ga0496114_0000014 | 3300048917 | Bacteria | 297902 |
| 149 | Ga0496115_0000020 | 3300048918 | Bacteria | 171995 |
| 150 | Ga0496115_0001011 | 3300048918 | Bacteria | 20397 |
| 151 | nmdc:mga0qj67_36879_c1 | 3300050509 | Bacteria | 3827 |
| 152 | Ga0495601_0000097 | 3300053077 | Bacteria | 48380 |
| 153 | Ga0495601_0016996 | 3300053077 | Bacteria | 4413 |
| 154 | Ga0495612_0005419 | 3300053078 | Bacteria | 5274 |
| 155 | Ga0495612_0082780 | 3300053078 | Bacteria | 1350 |
| 156 | Ga0495655_0001319 | 3300053083 | Bacteria | 3817 |
| 157 | Ga0495595_0000066 | 3300053084 | Bacteria | 51901 |
| 158 | Ga0495595_0089118 | 3300053084 | Bacteria | 1478 |
| 159 | Ga0495619_0000022 | 3300053085 | Bacteria | 184144 |
| 160 | Ga0495619_0000675 | 3300053085 | Bacteria | 22353 |
| 161 | Ga0495619_0125214 | 3300053085 | Bacteria | 1763 |
| 162 | Ga0495619_0281384 | 3300053085 | Bacteria | 1153 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046517 | Ga0495630_0000025 | Ga0495630_0000025_29371_29970 | 150 |
| 2 | 3300046461 | Ga0495641_0044517 | Ga0495641_0044517_822_1418 | 151 |
| 3 | 3300046681 | Ga0495647_0002331 | Ga0495647_0002331_3283_3879 | 151 |
| 4 | 3300005329 | Ga0070683_100020405 | Ga0070683_1000204054 | 154 |
| 5 | 3300005535 | Ga0070684_100004932 | Ga0070684_1000049322 | 154 |
| 6 | 3300006175 | Ga0070712_100001953 | Ga0070712_1000019539 | 154 |
| 7 | 3300025915 | Ga0207693_10000853 | Ga0207693_1000085313 | 154 |
| 8 | 3300025944 | Ga0207661_10002697 | Ga0207661_100026975 | 154 |
| 9 | 3300005578 | Ga0068854_100205332 | Ga0068854_1002053322 | 156 |
| 10 | 3300025981 | Ga0207640_10180102 | Ga0207640_101801022 | 156 |
| 11 | 3300046690 | Ga0495624_0000686 | Ga0495624_0000686_16467_17063 | 158 |
| 12 | 3300005365 | Ga0070688_100000798 | Ga0070688_10000079811 | 159 |
| 13 | 3300005466 | Ga0070685_10000521 | Ga0070685_1000052120 | 159 |
| 14 | 3300014969 | Ga0157376_10010369 | Ga0157376_100103695 | 159 |
| 15 | 3300044842 | Ga0466957_0003561 | Ga0466957_0003561_5070_5588 | 159 |
| 16 | 3300005329 | Ga0070683_100002841 | Ga0070683_1000028418 | 160 |
| 17 | 3300005535 | Ga0070684_100355915 | Ga0070684_1003559152 | 160 |
| 18 | 3300005543 | Ga0070672_100000004 | Ga0070672_10000000458 | 160 |
| 19 | 3300025940 | Ga0207691_10000020 | Ga0207691_1000002067 | 160 |
| 20 | 3300025944 | Ga0207661_10002066 | Ga0207661_100020667 | 160 |
| 21 | 3300046690 | Ga0495624_0000030 | Ga0495624_0000030_40699_41235 | 163 |
| 22 | 3300048912 | Ga0496109_0000252 | Ga0496109_0000252_15678_16274 | 164 |
| 23 | 3300005544 | Ga0070686_100408614 | Ga0070686_1004086141 | 165 |
| 24 | 3300014326 | Ga0157380_10000028 | Ga0157380_1000002896 | 165 |
| 25 | 3300046642 | Ga0495634_0097094 | Ga0495634_0097094_1255_1878 | 165 |
| 26 | 3300053085 | Ga0495619_0000675 | Ga0495619_0000675_6120_6743 | 165 |
| 27 | 3300005439 | Ga0070711_100001483 | Ga0070711_1000014836 | 166 |
| 28 | 3300009176 | Ga0105242_10000605 | Ga0105242_100006058 | 166 |
| 29 | 3300025916 | Ga0207663_10004129 | Ga0207663_100041292 | 166 |
| 30 | 3300048917 | Ga0496114_0000014 | Ga0496114_0000014_8966_9484 | 166 |
| 31 | 3300048918 | Ga0496115_0001011 | Ga0496115_0001011_6989_7507 | 166 |
| 32 | 3300005341 | Ga0070691_10000105 | Ga0070691_100001057 | 168 |
| 33 | 3300005545 | Ga0070695_100162188 | Ga0070695_1001621882 | 168 |
| 34 | 3300017792 | Ga0163161_10206056 | Ga0163161_102060562 | 168 |
| 35 | 3300046459 | Ga0495629_0001932 | Ga0495629_0001932_13_615 | 169 |
| 36 | 3300046690 | Ga0495624_0027950 | Ga0495624_0027950_1626_2174 | 169 |
| 37 | 3300046454 | Ga0495592_0117360 | Ga0495592_0117360_293_886 | 170 |
| 38 | 3300046663 | Ga0495635_0000256 | Ga0495635_0000256_13504_14055 | 170 |
| 39 | 3300005983 | Ga0081540_1073498 | Ga0081540_10734982 | 171 |
| 40 | 3300046533 | Ga0495640_0012621 | Ga0495640_0012621_3930_4523 | 171 |
| 41 | 3300046678 | Ga0495599_0269324 | Ga0495599_0269324_310_900 | 171 |
| 42 | 3300047319 | Ga0495674_0000020 | Ga0495674_0000020_168810_169403 | 171 |
| 43 | 3300046539 | Ga0495621_0004400 | Ga0495621_0004400_2198_2803 | 172 |
| 44 | 3300048916 | Ga0496113_0004715 | Ga0496113_0004715_4735_5340 | 172 |
| 45 | 3300053078 | Ga0495612_0005419 | Ga0495612_0005419_86_634 | 172 |
| 46 | 3300046516 | Ga0495628_0556317 | Ga0495628_0556317_49_642 | 173 |
| 47 | 3300046642 | Ga0495634_0002325 | Ga0495634_0002325_11712_12302 | 173 |
| 48 | 3300009098 | Ga0105245_10000056 | Ga0105245_1000005641 | 174 |
| 49 | 3300025927 | Ga0207687_10000007 | Ga0207687_1000000782 | 174 |
| 50 | 3300025944 | Ga0207661_10016037 | Ga0207661_100160378 | 174 |
| 51 | 3300053085 | Ga0495619_0281384 | Ga0495619_0281384_425_1015 | 174 |
| 52 | 3300013297 | Ga0157378_10021651 | Ga0157378_100216515 | 175 |
| 53 | 3300046689 | Ga0495613_0000309 | Ga0495613_0000309_38319_38927 | 175 |
| 54 | 3300046810 | Ga0495660_0292915 | Ga0495660_0292915_93_647 | 175 |
| 55 | 3300048914 | Ga0496111_0000225 | Ga0496111_0000225_6471_7166 | 175 |
| 56 | 3300053077 | Ga0495601_0000097 | Ga0495601_0000097_46237_46848 | 175 |
| 57 | 3300047317 | Ga0495604_0000038 | Ga0495604_0000038_38988_39530 | 176 |
| 58 | 3300026035 | Ga0207703_10078412 | Ga0207703_100784123 | 177 |
| 59 | 3300005563 | Ga0068855_100961807 | Ga0068855_1009618071 | 178 |
| 60 | 3300013307 | Ga0157372_10000473 | Ga0157372_1000047322 | 178 |
| 61 | 3300025949 | Ga0207667_10087207 | Ga0207667_100872074 | 178 |
| 62 | 3300005578 | Ga0068854_100000212 | Ga0068854_10000021213 | 179 |
| 63 | 3300005834 | Ga0068851_10002468 | Ga0068851_100024684 | 179 |
| 64 | 3300005841 | Ga0068863_100020939 | Ga0068863_1000209395 | 179 |
| 65 | 3300009098 | Ga0105245_10019243 | Ga0105245_100192434 | 179 |
| 66 | 3300025321 | Ga0207656_10001327 | Ga0207656_100013277 | 179 |
| 67 | 3300025927 | Ga0207687_10040647 | Ga0207687_100406472 | 179 |
| 68 | 3300025934 | Ga0207686_10000032 | Ga0207686_1000003236 | 179 |
| 69 | 3300025981 | Ga0207640_10000137 | Ga0207640_1000013730 | 179 |
| 70 | 3300026088 | Ga0207641_10005462 | Ga0207641_100054627 | 179 |
| 71 | 3300005539 | Ga0068853_100055641 | Ga0068853_1000556413 | 180 |
| 72 | 3300005548 | Ga0070665_100062314 | Ga0070665_1000623143 | 180 |
| 73 | 3300026041 | Ga0207639_10047825 | Ga0207639_100478253 | 180 |
| 74 | 3300028379 | Ga0268266_10070484 | Ga0268266_100704843 | 180 |
| 75 | 3300005344 | Ga0070661_100000005 | Ga0070661_100000005176 | 182 |
| 76 | 3300025920 | Ga0207649_10000005 | Ga0207649_10000005319 | 182 |
| 77 | 3300046454 | Ga0495592_0007646 | Ga0495592_0007646_5765_6358 | 182 |
| 78 | 3300046477 | Ga0495664_0195014 | Ga0495664_0195014_587_1180 | 182 |
| 79 | 3300046511 | Ga0495608_0000585 | Ga0495608_0000585_2517_3110 | 182 |
| 80 | 3300046689 | Ga0495613_0000042 | Ga0495613_0000042_91474_92067 | 182 |
| 81 | 3300047322 | Ga0495680_0067536 | Ga0495680_0067536_593_1186 | 182 |
| 82 | 3300053084 | Ga0495595_0000066 | Ga0495595_0000066_25548_26141 | 182 |
| 83 | 3300005337 | Ga0070682_100000080 | Ga0070682_10000008028 | 183 |
| 84 | 3300044694 | Ga0466963_0000019 | Ga0466963_0000019_10527_11114 | 183 |
| 85 | 3300046454 | Ga0495592_0170844 | Ga0495592_0170844_177_761 | 183 |
| 86 | 3300046516 | Ga0495628_0010432 | Ga0495628_0010432_3891_4487 | 183 |
| 87 | 3300046533 | Ga0495640_0019533 | Ga0495640_0019533_1586_2182 | 183 |
| 88 | 3300046642 | Ga0495634_0166260 | Ga0495634_0166260_319_915 | 183 |
| 89 | 3300053083 | Ga0495655_0001319 | Ga0495655_0001319_1394_2005 | 183 |
| 90 | 3300005718 | Ga0068866_10667573 | Ga0068866_106675731 | 184 |
| 91 | 3300046461 | Ga0495641_0005074 | Ga0495641_0005074_1488_2078 | 184 |
| 92 | 3300053085 | Ga0495619_0000022 | Ga0495619_0000022_94379_94984 | 184 |
| 93 | 3300006358 | Ga0068871_100630017 | Ga0068871_1006300172 | 185 |
| 94 | 3300020070 | Ga0206356_10633812 | Ga0206356_106338122 | 185 |
| 95 | 3300046459 | Ga0495629_0140974 | Ga0495629_0140974_65_685 | 185 |
| 96 | 3300046516 | Ga0495628_0475512 | Ga0495628_0475512_81_698 | 185 |
| 97 | 3300046517 | Ga0495630_0000833 | Ga0495630_0000833_18171_18788 | 185 |
| 98 | 3300046535 | Ga0495586_0000672 | Ga0495586_0000672_13899_14534 | 185 |
| 99 | 3300046675 | Ga0495657_0040249 | Ga0495657_0040249_653_1270 | 185 |
| 100 | 3300046681 | Ga0495647_0000019 | Ga0495647_0000019_63731_64327 | 185 |
| 101 | 3300047317 | Ga0495604_0286290 | Ga0495604_0286290_199_795 | 185 |
| 102 | 3300053077 | Ga0495601_0016996 | Ga0495601_0016996_3289_3906 | 185 |
| 103 | 3300053078 | Ga0495612_0082780 | Ga0495612_0082780_600_1217 | 185 |
| 104 | 3300053085 | Ga0495619_0125214 | Ga0495619_0125214_275_892 | 185 |
| 105 | 3300048905 | Ga0496102_0520173 | Ga0496102_0520173_127_714 | 186 |
| 106 | 3300005330 | Ga0070690_100023378 | Ga0070690_1000233784 | 187 |
| 107 | 3300005335 | Ga0070666_10146126 | Ga0070666_101461261 | 187 |
| 108 | 3300005548 | Ga0070665_100001712 | Ga0070665_1000017127 | 187 |
| 109 | 3300005614 | Ga0068856_100005839 | Ga0068856_1000058399 | 187 |
| 110 | 3300006846 | Ga0075430_100043433 | Ga0075430_1000434333 | 187 |
| 111 | 3300013296 | Ga0157374_10755920 | Ga0157374_107559202 | 187 |
| 112 | 3300014326 | Ga0157380_10100769 | Ga0157380_101007693 | 187 |
| 113 | 3300025986 | Ga0207658_10062262 | Ga0207658_100622624 | 187 |
| 114 | 3300028379 | Ga0268266_10000553 | Ga0268266_100005533 | 187 |
| 115 | 3300046460 | Ga0495638_0109503 | Ga0495638_0109503_881_1477 | 187 |
| 116 | 3300046492 | Ga0495585_0315288 | Ga0495585_0315288_145_741 | 187 |
| 117 | 3300046674 | Ga0495588_0000311 | Ga0495588_0000311_26482_27078 | 187 |
| 118 | 3300050509 | nmdc:mga0qj67_36879_c1 | nmdc:mga0qj67_36879_c1_839_1426 | 187 |
| 119 | 3300006881 | Ga0068865_100000017 | Ga0068865_10000001776 | 188 |
| 120 | 3300013104 | Ga0157370_10229434 | Ga0157370_102294342 | 188 |
| 121 | 3300025938 | Ga0207704_10000025 | Ga0207704_1000002567 | 188 |
| 122 | 3300046660 | Ga0495625_0000029 | Ga0495625_0000029_27831_28421 | 188 |
| 123 | 3300046683 | Ga0495658_0004523 | Ga0495658_0004523_916_1527 | 188 |
| 124 | 3300047321 | Ga0495676_0174898 | Ga0495676_0174898_847_1446 | 188 |
| 125 | 3300048916 | Ga0496113_0457506 | Ga0496113_0457506_66_677 | 188 |
| 126 | 3300003659 | JGI25404J52841_10002317 | JGI25404J52841_100023176 | 189 |
| 127 | 3300005295 | Ga0065707_10197486 | Ga0065707_101974862 | 189 |
| 128 | 3300005340 | Ga0070689_100233690 | Ga0070689_1002336901 | 189 |
| 129 | 3300005345 | Ga0070692_10347698 | Ga0070692_103476981 | 189 |
| 130 | 3300005365 | Ga0070688_100000843 | Ga0070688_10000084313 | 189 |
| 131 | 3300005365 | Ga0070688_100015073 | Ga0070688_1000150733 | 189 |
| 132 | 3300005456 | Ga0070678_100324278 | Ga0070678_1003242782 | 189 |
| 133 | 3300005466 | Ga0070685_10000734 | Ga0070685_100007348 | 189 |
| 134 | 3300005616 | Ga0068852_100000467 | Ga0068852_10000046716 | 189 |
| 135 | 3300005841 | Ga0068863_100152865 | Ga0068863_1001528654 | 189 |
| 136 | 3300005843 | Ga0068860_100156096 | Ga0068860_1001560964 | 189 |
| 137 | 3300005983 | Ga0081540_1000006 | Ga0081540_100000634 | 189 |
| 138 | 3300009101 | Ga0105247_10154631 | Ga0105247_101546311 | 189 |
| 139 | 3300009177 | Ga0105248_10000032 | Ga0105248_1000003280 | 189 |
| 140 | 3300010375 | Ga0105239_10020981 | Ga0105239_100209818 | 189 |
| 141 | 3300010375 | Ga0105239_10231337 | Ga0105239_102313371 | 189 |
| 142 | 3300013105 | Ga0157369_10000099 | Ga0157369_1000009964 | 189 |
| 143 | 3300014968 | Ga0157379_10662639 | Ga0157379_106626391 | 189 |
| 144 | 3300025898 | Ga0207692_10419023 | Ga0207692_104190231 | 189 |
| 145 | 3300025909 | Ga0207705_10151443 | Ga0207705_101514433 | 189 |
| 146 | 3300025929 | Ga0207664_10011020 | Ga0207664_100110207 | 189 |
| 147 | 3300025936 | Ga0207670_10196986 | Ga0207670_101969861 | 189 |
| 148 | 3300025941 | Ga0207711_10000020 | Ga0207711_10000020294 | 189 |
| 149 | 3300026142 | Ga0207698_10000041 | Ga0207698_1000004114 | 189 |
| 150 | 3300046557 | Ga0495622_0000014 | Ga0495622_0000014_159540_160109 | 189 |
| 151 | 3300047321 | Ga0495676_0002782 | Ga0495676_0002782_9706_10293 | 189 |
| 152 | 3300047472 | Ga0495686_0045321 | Ga0495686_0045321_579_1172 | 189 |
| 153 | 3300048088 | Ga0495602_0000228 | Ga0495602_0000228_49694_50308 | 189 |
| 154 | 3300048903 | Ga0496100_0000049 | Ga0496100_0000049_61350_61937 | 189 |
| 155 | 3300048904 | Ga0496101_0000010 | Ga0496101_0000010_38623_39210 | 189 |
| 156 | 3300048906 | Ga0496103_0293369 | Ga0496103_0293369_79_675 | 189 |
| 157 | 3300048909 | Ga0496106_0000018 | Ga0496106_0000018_34069_34656 | 189 |
| 158 | 3300048910 | Ga0496107_0000032 | Ga0496107_0000032_60687_61274 | 189 |
| 159 | 3300048911 | Ga0496108_0000045 | Ga0496108_0000045_84090_84791 | 189 |
| 160 | 3300048912 | Ga0496109_0000032 | Ga0496109_0000032_52635_53336 | 189 |
| 161 | 3300048918 | Ga0496115_0000020 | Ga0496115_0000020_80852_81493 | 189 |
| 162 | 3300053084 | Ga0495595_0089118 | Ga0495595_0089118_797_1411 | 189 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2qdw-assembly1.cif.gz_A | structure of cu(i) form of the m51a mutant of amicyanin | 0.7575 | 37 | 185 |
| 1sf5-assembly1.cif.gz_A | structure of oxidized state of the p94a mutant of amicyanin | 0.7522 | 40 | 185 |
| 2idu-assembly1.cif.gz_A | structure of m98q mutant of amicyanin, cu(i) | 0.752 | 32 | 185 |
| 1sfh-assembly2.cif.gz_B | reduced state of amicyanin mutant p94f | 0.7437 | 39 | 185 |
| 3ply-assembly4.cif.gz_D | structure of oxidized p96g mutant of amicyanin | 0.7301 | 36 | 185 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5fc9B00 | Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - | 0.7468 | 42 | 185 | 2.60.40.420 |
| 5fc9B00 | Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - | 0.7256 | 42 | 185 | 2.60.40.420 |
| af_A0A1D6HT08_29_132_2.60.40.420 | Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - | 0.6977 | 60 | 189 | 2.60.40.420 |
| 1mdaA00 | Mainly Beta;Sandwich;Immunoglobulin-like;Cupredoxins - | 0.656 | 34 | 185 | 2.60.40.420 |
| af_G5EDX1_562_658_2.60.40.10 | Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins | 0.6445 | 145 | 189 | 2.60.40.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A838UZC5-F1-model_v4 | Blue (type 1) copper domain-containing protein | 0.8743 | 4 | 187 |
|
| AF-A0A1Q7FXH9-F1-model_v4 | Rhamnogalacturonan lyase domain-containing protein | 0.8435 | 40 | 186 |
|
| AF-A0A838UZC5-F1-model_v4 | Blue (type 1) copper domain-containing protein | 0.8316 | 4 | 187 |
|
| AF-A0A3D1TEH2-F1-model_v4 | Rhamnogalacturonan lyase domain-containing protein | 0.831 | 41 | 188 |
|
| AF-A0A1Q8A4P6-F1-model_v4 | Blue (type 1) copper domain-containing protein | 0.8301 | 41 | 186 |
|
Predicted Structure (AlphaFold2)
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