F238135

General Info

Members Datasets Scaffolds Average Seq Length
161 109 322 457

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2997600082|2997604591
Length 542
Sequence PSARASDTPSPAPATGGAAAAAGAPEPSASHPTSSNHWSDRHGRHPPNPNPPCRFGGPPREVPTITAETTSADRRAALDRAARLRQLSEVDQDLIRLVQDPGFSRWLDQITATGGCAHPIHLTGSTTTRDALTGELLHHYDTRNEPGERLLIRCRNRRATVCAPCSRLHAGDTFHLVRAGLLGGKTVPADVRERPRLFLTLTAPSFGPVHRTTTDGQRCRPRRDAGQCEHGRPLGCPAVHDGTERLVGQPLCPDCYDYAAHILWHAHAGRLWKAFTDNLYNHLAARVGHTRTGLRRSLRISYAKVAEYQKRAAVHVHAVVRLDGVHGSDDPPPAWATADVLLAVVRTAAAAVHLHTPYSVALGEHELRWGTELDARPLRAFGDGEGLADDAVAAYVAKYVTKGATDTGAGLDHQIANLDEIEAAPVSAHVRTLMRACWRLGGLLELEPLRLRAWAHTLGYRGHILTKSRAYSTTYAALRTERADHQRDRTQLADPDVIRDAHWRYVGSGHTPGAALIATGIAEDLERNREIAREHRGGESTS

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
8 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
9 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
10 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
11 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
12 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
13 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
14 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
15 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
16 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
17 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
18 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
19 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
20 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
21 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
22 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
23 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
24 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
25 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
26 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
27 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
28 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
29 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
30 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
31 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
32 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
33 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
34 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
35 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
36 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
37 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
38 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
39 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
40 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
41 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
42 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
43 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
44 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
45 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
46 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
47 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
48 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
49 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
50 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
51 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
52 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
53 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
54 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
55 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
56 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
57 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
58 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
59 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
65 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
69 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
70 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
73 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
74 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
75 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
76 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
77 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
78 2643221548 Streptomyces sp. Root55 Isolate Unclassified
79 2643221578 Streptomyces sp. Root63 Isolate Unclassified
80 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
81 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
82 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
83 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
84 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
85 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
86 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
87 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
88 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
89 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
90 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
91 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
92 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
93 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
94 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
95 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
96 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
97 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
98 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
99 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
100 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
101 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
102 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
103 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
104 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
105 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
106 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
107 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
108 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
109 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 73.91
Metatranscriptomes 1.24
Isolates 24.84

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.48
Nodule 0
Rhizoplane 0
Rhizosphere 70.19
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10004380 3300003316 Bacteria 26063
2 rootH2_10009784 3300003320 Bacteria 27893
3 rootL2_10009957 3300003322 Bacteria 22080
4 rootH1_10017845 3300003323 Bacteria 11975
5 rootH1_10052396 3300003323 Bacteria 7214
6 rootH1_10106897 3300003323 Bacteria 4327
7 JGI25160J50197_1000651 3300003354 Bacteria 19299
8 Ga0006562J51391_1140752 3300003578 Bacteria 6320
9 Ga0006562J51391_1140754 3300003578 Bacteria 5870
10 Ga0105237_10005797 3300009545 Bacteria 13860
11 Ga0207426_1001205 3300025302 Bacteria 22985
12 Ga0207671_10001100 3300025914 Bacteria 32636
13 Ga0307511_10000029 3300030521 Bacteria 108570
14 Ga0307511_10000414 3300030521 Bacteria 45583
15 Ga0307513_10163169 3300031456 Bacteria 2117
16 Ga0307509_10012761 3300031507 Bacteria 10010
17 Ga0307508_10001984 3300031616 Bacteria 22367
18 Ga0307508_10006054 3300031616 Bacteria 11414
19 Ga0307508_10014791 3300031616 Bacteria 7116
20 Ga0307508_10026465 3300031616 Bacteria 5257
21 Ga0307508_10032227 3300031616 Bacteria 4735
22 Ga0307508_10047781 3300031616 Bacteria 3814
23 Ga0307514_10024575 3300031649 Bacteria 4875
24 Ga0307514_10079662 3300031649 Bacteria 2427
25 Ga0307518_10016384 3300031838 Bacteria 5312
26 Ga0373935_0008548 3300035692 Bacteria 6129
27 Ga0395898_0001842 3300037466 Bacteria 27261
28 Ga0436364_0216625 3300037853 Bacteria 2206
29 Ga0466966_0066215 3300044684 Bacteria 2271
30 Ga0466970_0014588 3300044765 Bacteria 4036
31 Ga0495592_0021126 3300046454 Bacteria 4950
32 Ga0495603_0002638 3300046455 Bacteria 10577
33 Ga0495603_0015402 3300046455 Bacteria 4626
34 Ga0495629_0002527 3300046459 Bacteria 14027
35 Ga0495629_0005298 3300046459 Bacteria 9642
36 Ga0495651_0002686 3300046462 Bacteria 13795
37 Ga0495653_0231244 3300046463 Bacteria 1237
38 Ga0495605_0001984 3300046474 Bacteria 12958
39 Ga0495662_0038273 3300046476 Bacteria 2318
40 Ga0495664_0006552 3300046477 Bacteria 6432
41 Ga0495664_0021972 3300046477 Bacteria 3690
42 Ga0495664_0028791 3300046477 Bacteria 3245
43 Ga0495585_0005228 3300046492 Bacteria 8226
44 Ga0495608_0060251 3300046511 Bacteria 2498
45 Ga0495628_0020170 3300046516 Bacteria 5501
46 Ga0495652_0007111 3300046529 Bacteria 10326
47 Ga0495640_0108788 3300046533 Bacteria 1813
48 Ga0495587_0001991 3300046536 Bacteria 13627
49 Ga0495587_0010350 3300046536 Bacteria 5942
50 Ga0495622_0001248 3300046557 Bacteria 13078
51 Ga0495667_0001674 3300046559 Bacteria 14707
52 Ga0495668_0046449 3300046616 Bacteria 2412
53 Ga0495634_0001630 3300046642 Bacteria 19530
54 Ga0495634_0002539 3300046642 Bacteria 15099
55 Ga0495634_0009353 3300046642 Bacteria 7230
56 Ga0495634_0043343 3300046642 Bacteria 3050
57 Ga0495611_0014029 3300046648 Bacteria 3418
58 Ga0495635_0000821 3300046663 Bacteria 20349
59 Ga0495635_0036184 3300046663 Bacteria 3422
60 Ga0495635_0040651 3300046663 Bacteria 3214
61 Ga0495588_0003390 3300046674 Bacteria 6924
62 Ga0495657_0004584 3300046675 Bacteria 11034
63 Ga0495657_0009067 3300046675 Bacteria 7561
64 Ga0495599_0047410 3300046678 Bacteria 2693
65 Ga0495623_0002011 3300046679 Bacteria 13653
66 Ga0495623_0015426 3300046679 Bacteria 4939
67 Ga0495623_0063702 3300046679 Bacteria 2308
68 Ga0495646_0026557 3300046680 Bacteria 3635
69 Ga0495613_0000898 3300046689 Bacteria 22894
70 Ga0495613_0002299 3300046689 Bacteria 14474
71 Ga0495613_0005660 3300046689 Bacteria 9363
72 Ga0495613_0069525 3300046689 Bacteria 2566
73 Ga0495613_0135471 3300046689 Bacteria 1762
74 Ga0495600_0001935 3300046809 Bacteria 11637
75 Ga0495600_0002645 3300046809 Bacteria 10341
76 Ga0495600_0010265 3300046809 Bacteria 5806
77 Ga0495600_0033444 3300046809 Bacteria 3338
78 Ga0495660_0017990 3300046810 Bacteria 4066
79 Ga0495604_0000226 3300047317 Bacteria 50983
80 Ga0495604_0001750 3300047317 Bacteria 17747
81 Ga0495604_0005143 3300047317 Bacteria 10359
82 Ga0495676_0006690 3300047321 Bacteria 10614
83 Ga0495676_0013018 3300047321 Bacteria 7487
84 Ga0495676_0043581 3300047321 Bacteria 3669
85 Ga0495676_0154322 3300047321 Bacteria 1630
86 Ga0495683_0012071 3300047323 Bacteria 4541
87 Ga0495683_0015591 3300047323 Bacteria 3951
88 Ga0495683_0052620 3300047323 Bacteria 2032
89 Ga0495687_004016 3300047443 Bacteria 10219
90 Ga0495687_009271 3300047443 Bacteria 5523
91 Ga0495687_021130 3300047443 Bacteria 3158
92 Ga0495687_030191 3300047443 Bacteria 2498
93 Ga0495675_0002856 3300047444 Bacteria 10357
94 Ga0495675_0006329 3300047444 Bacteria 7249
95 Ga0495675_0008073 3300047444 Bacteria 6516
96 Ga0495685_028409 3300047447 Bacteria 1924
97 Ga0495685_033129 3300047447 Bacteria 1775
98 Ga0495684_0015485 3300047471 Bacteria 5868
99 Ga0495593_0002993 3300047673 Bacteria 10178
100 Ga0495593_0021306 3300047673 Bacteria 3622
101 Ga0495593_0056185 3300047673 Bacteria 2070
102 Ga0495614_0000141 3300048089 Bacteria 25843
103 Ga0495614_0000188 3300048089 Bacteria 23296
104 Ga0495614_0000232 3300048089 Bacteria 21631
105 Ga0501032_0011790 3300049569 Bacteria 6264
106 Ga0501036_0004058 3300049572 Bacteria 11775
107 Ga0501037_0007719 3300049573 Bacteria 7874
108 Ga0501038_0011129 3300049574 Bacteria 8216
109 Ga0501039_0003505 3300049575 Bacteria 11741
110 Ga0501040_0015205 3300049576 Bacteria 5085
111 Ga0501042_0086499 3300049578 Bacteria 2248
112 Ga0501043_0004141 3300049579 Bacteria 11846
113 Ga0501046_0007609 3300049580 Bacteria 9504
114 Ga0501048_0028431 3300049582 Bacteria 4057
115 Ga0501070_0015396 3300049586 Bacteria 6434
116 Ga0501080_0074972 3300049742 Bacteria 3147
117 Ga0501035_0038699 3300049822 Bacteria 4317
118 Ga0501044_0020497 3300049823 Bacteria 7060
119 Ga0501045_0163063 3300049824 Bacteria 1659
120 Ga0500641_0024431 3300053096 Bacteria 2330
121 Ga0500600_0054734 3300053149 Bacteria 2249
122 2997604591 2997600082 Bacteria 9896405
123 2585304815 2582581313 Bacteria 10042643
124 2616700723 2616644814 Bacteria 11555299
125 2643765080 2643221548 Bacteria 8053412
126 2643900076 2643221578 Bacteria 9213798
127 2643943531 2643221587 Bacteria 7586415
128 2644405700 2643221673 Bacteria 9196637
129 2644429818 2643221677 Bacteria 7584031
130 2644461082 2643221682 Bacteria 6743283
131 2784588953 2784132148 Bacteria 8627943
132 2786669677 2786546132 Bacteria 10419719
133 2808842518 2808606359 Bacteria 9866990
134 2811844624 2808606982 Bacteria 7791042
135 2811848895 2808606982 Bacteria 7791042
136 2812358875 2811994879 Bacteria 9313447
137 2819742862 2818991472 Bacteria 10089953
138 2852641271 2852635781 Bacteria 8251373
139 2862291438 2862290372 Bacteria 7471434
140 2862291729 2862290372 Bacteria 7471434
141 2862508178 2862507626 Bacteria 9425308
142 2867346988 2867346516 Bacteria 7608576
143 2870783092 2870782633 Bacteria 9624083
144 2873155843 2873151551 Bacteria 8625867
145 2877681455 2877676314 Bacteria 9512378
146 2877681919 2877676314 Bacteria 9512378
147 2912760199 2912757875 Bacteria 7940295
148 2946067016 2946064051 Bacteria 8957905
149 2946068707 2946064051 Bacteria 8957905
150 2954678913 2954673503 Bacteria 9685905
151 2954685238 2954682443 Bacteria 9862841
152 2954714040 2954711539 Bacteria 10867210
153 2954756683 2954749733 Bacteria 10366972
154 2966601779 2966598605 Bacteria 7676064
155 2990048312 2990044586 Bacteria 6603797
156 3006428321 3006425503 Bacteria 6491253
157 3006493238 3006486233 Bacteria 8157040
158 8008579509 8008574985 Bacteria 7815457
159 8048129489 8048127548 Bacteria 11053136
160 8048407763 8048406513 Bacteria 8936924
161 8048411964 8048406513 Bacteria 8936924
162 rootH1_10004380
163 rootH2_10009784
164 rootL2_10009957
165 rootH1_10017845
166 rootH1_10052396
167 rootH1_10106897
168 JGI25160J50197_1000651
169 Ga0006562J51391_1140752
170 Ga0006562J51391_1140754
171 Ga0105237_10005797
172 Ga0207426_1001205
173 Ga0207671_10001100
174 Ga0307511_10000029
175 Ga0307511_10000414
176 Ga0307513_10163169
177 Ga0307509_10012761
178 Ga0307508_10001984
179 Ga0307508_10006054
180 Ga0307508_10014791
181 Ga0307508_10026465
182 Ga0307508_10032227
183 Ga0307508_10047781
184 Ga0307514_10024575
185 Ga0307514_10079662
186 Ga0307518_10016384
187 Ga0373935_0008548
188 Ga0395898_0001842
189 Ga0436364_0216625
190 Ga0466966_0066215
191 Ga0466970_0014588
192 Ga0495592_0021126
193 Ga0495603_0002638
194 Ga0495603_0015402
195 Ga0495629_0002527
196 Ga0495629_0005298
197 Ga0495651_0002686
198 Ga0495653_0231244
199 Ga0495605_0001984
200 Ga0495662_0038273
201 Ga0495664_0006552
202 Ga0495664_0021972
203 Ga0495664_0028791
204 Ga0495585_0005228
205 Ga0495608_0060251
206 Ga0495628_0020170
207 Ga0495652_0007111
208 Ga0495640_0108788
209 Ga0495587_0001991
210 Ga0495587_0010350
211 Ga0495622_0001248
212 Ga0495667_0001674
213 Ga0495668_0046449
214 Ga0495634_0001630
215 Ga0495634_0002539
216 Ga0495634_0009353
217 Ga0495634_0043343
218 Ga0495611_0014029
219 Ga0495635_0000821
220 Ga0495635_0036184
221 Ga0495635_0040651
222 Ga0495588_0003390
223 Ga0495657_0004584
224 Ga0495657_0009067
225 Ga0495599_0047410
226 Ga0495623_0002011
227 Ga0495623_0015426
228 Ga0495623_0063702
229 Ga0495646_0026557
230 Ga0495613_0000898
231 Ga0495613_0002299
232 Ga0495613_0005660
233 Ga0495613_0069525
234 Ga0495613_0135471
235 Ga0495600_0001935
236 Ga0495600_0002645
237 Ga0495600_0010265
238 Ga0495600_0033444
239 Ga0495660_0017990
240 Ga0495604_0000226
241 Ga0495604_0001750
242 Ga0495604_0005143
243 Ga0495676_0006690
244 Ga0495676_0013018
245 Ga0495676_0043581
246 Ga0495676_0154322
247 Ga0495683_0012071
248 Ga0495683_0015591
249 Ga0495683_0052620
250 Ga0495687_004016
251 Ga0495687_009271
252 Ga0495687_021130
253 Ga0495687_030191
254 Ga0495675_0002856
255 Ga0495675_0006329
256 Ga0495675_0008073
257 Ga0495685_028409
258 Ga0495685_033129
259 Ga0495684_0015485
260 Ga0495593_0002993
261 Ga0495593_0021306
262 Ga0495593_0056185
263 Ga0495614_0000141
264 Ga0495614_0000188
265 Ga0495614_0000232
266 Ga0501032_0011790
267 Ga0501036_0004058
268 Ga0501037_0007719
269 Ga0501038_0011129
270 Ga0501039_0003505
271 Ga0501040_0015205
272 Ga0501042_0086499
273 Ga0501043_0004141
274 Ga0501046_0007609
275 Ga0501048_0028431
276 Ga0501070_0015396
277 Ga0501080_0074972
278 Ga0501035_0038699
279 Ga0501044_0020497
280 Ga0501045_0163063
281 Ga0500641_0024431
282 Ga0500600_0054734
283 2997604591
284 2585304815
285 2616700723
286 2643765080
287 2643900076
288 2643943531
289 2644405700
290 2644429818
291 2644461082
292 2784588953
293 2786669677
294 2808842518
295 2811844624
296 2811848895
297 2812358875
298 2819742862
299 2852641271
300 2862291438
301 2862291729
302 2862508178
303 2867346988
304 2870783092
305 2873155843
306 2877681455
307 2877681919
308 2912760199
309 2946067016
310 2946068707
311 2954678913
312 2954685238
313 2954714040
314 2954756683
315 2966601779
316 2990048312
317 3006428321
318 3006493238
319 8008579509
320 8048129489
321 8048407763
322 8048411964

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20199

RepSA

Replication initiator protein, pSAM2

102

523

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7wa9-assembly1.cif.gz_A crystal structure of msmeg_5634 from mycobacterium smegmatis 0.6663 233 276
1txc-assembly1.cif.gz_B complex crystal structure of spe16 with ans 0.6662 236 278
2k7h-assembly1.cif.gz_A nmr solution structure of soybean allergen gly m 4 0.6448 236 278
6cay-assembly1.cif.gz_A crystal structure of the first start-like domain of ysp2p/lam2p in its apo and ergosterol-bound state. 0.6347 232 278
6ax0-assembly1.cif.gz_A structure of pr-10 allergen ara h 8.01 in complex with epicatechin 0.6153 236 278
ID Description Score Start End Superfamily
af_Q8IHR6_950_1067_3.30.310.10 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;TATA-Binding Protein 0.724 230 275 3.30.310.10
af_Q8WUJ3_1244_1330_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.6987 59 76 3.40.50.2300
af_Q4CRU8_433_536_3.30.300.330 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3; 0.6947 203 278 3.30.300.330
af_I1MGJ7_35_194_3.30.530.20 Alpha Beta;2-Layer Sandwich;Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4;START domain 0.6846 236 278 3.30.530.20
af_Q20183_436_601_2.60.120.820 Mainly Beta;Sandwich;Jelly Rolls;PHR domain 0.6826 51 76 2.60.120.820
ID Description Score Start End GO Terms
AF-A0A1X7HD34-F1-model_v4 Uncharacterized protein 0.9433 196 300
AF-A0A4R4NN02-F1-model_v4 Replication initiation protein 0.9153 22 462
AF-A0A2W6E4W1-F1-model_v4 Replication initiation protein 0.9144 49 431
AF-A0A5D0P0B3-F1-model_v4 Replication initiation protein 0.9072 31 446
AF-A0A7Y6FI81-F1-model_v4 Replication initiation protein 0.9055 89 327

Map