F237796
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 161 | 127 | 153 | 676 |
Family's Representative Sequence
| Representative Sequence | 3300048908|Ga0496105_0062334|Ga0496105_0062334_204_2504 |
| Length | 766 |
| Sequence | MAESAVAPHIPAARAFSGSVLPQCQRTGFAHATRTSNPERPMTTSDTSPHTPASPPHENRLAHETSPYLLQHSHNPVEWWPWGPQALAAAKASNKPILLSIGYAACHWCHVMAHESFEDATIAAVMNDLFINIKVDREERPDIDQIYMAALHALGEQGGWPLTMFLTPDGEPVWGGTYFPKVARYGRPGFVDIMREVARLFRDEPQRIAHNRNALMKALATKSRPAGTVVIGPDELDATAAAIGRAFDHVNGGLGRAPKFPQCSMLELLWRTGQRRNEARFFELVELTLTHMSEGGIYDHLGGGFSRYSVDERWLVPHFEKMLYDNAQLLELLALAHLRTGDDLYRQRAEETVGWLAREMTTPDGAFSASLDADSEGEEGKFYVWSRAEIEEVLGPRDAEFFARIYDVTPGGNFEGHNILNRLASLSETKKSDEPAAPPAKNGTPGNGHSGDRPVPAADYLIAQKRRADNIVRITSLREKLLAARAKRIRPGLDDKVLADWNGLMIAALVNAGVMLREPAWIGMAKRAFAFITVHMTRGDRLGHSWRAGKLLYPGLASDHAAMIRAALALYEATGAQEYLVAALTWQTALDRHYVNRETGGYYLTADDAEGLVVRPESTADEAIPNPIGLAAQNLVRLAVLTGDDLWRERADILFDGLLPIAAESMYMHASLLNALDLRMRALEIVAVGPAADRFAETALAQPYLDRIVARAASLDALPARHPARAVKLTPGATAALVCAGERCSLPVMDVDKLVEAIAAARVQLS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221736 | Bosea sp. Root483D1 | Isolate | Unclassified |
| 2 | 2841760612 | Bosea sp. Tri-49 | Isolate | Nodule |
| 3 | 2844104063 | Bosea sp. Tri-39 | Isolate | Nodule |
| 4 | 2851182111 | Bosea sp. Tri-44 | Isolate | Nodule |
| 5 | 2851246043 | Bosea sp. Tri-54 | Isolate | Nodule |
| 6 | 2909042592 | Labrys sp. LIt4 | Isolate | Nodule |
| 7 | 2939669807 | Kaistia defluvii 3207 | Isolate | Rhizosphere |
| 8 | 3300000041 | Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere | Metagenome | Rhizosphere |
| 9 | 3300002987 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB | Metagenome | Endosphere |
| 10 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 11 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 12 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 13 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 15 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 16 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 17 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 23 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 24 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 25 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 26 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 27 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 28 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 29 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 30 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 32 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 33 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 34 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 35 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 36 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 37 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 38 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 43 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 44 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 45 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 46 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 57 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 59 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 60 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 61 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 62 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 63 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 64 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 65 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 66 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 67 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 68 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 69 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 70 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 71 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 72 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 73 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 74 | 3300042461 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 | Metagenome | Rhizosphere |
| 75 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 76 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 77 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046531 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300047673 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 90 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 91 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 92 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 93 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 94 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 95 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 96 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 97 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 98 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 99 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 100 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 101 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 104 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 109 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 110 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 113 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 114 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 115 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 116 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 117 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 121 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 124 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 125 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 126 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 127 | 8054563764 | Acuticoccus kalidii M5D2P5 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.03 |
| Metatranscriptomes | 0 |
| Isolates | 4.97 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.8 |
| Nodule | 3.11 |
| Rhizoplane | 6.83 |
| Rhizosphere | 75.78 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.48 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | ARcpr5oldR_c000196 | 3300000041 | Bacteria | 10309 |
| 2 | JGI25159J45721_1007301 | 3300002987 | Bacteria | 3180 |
| 3 | JGI25153J46596_10004479 | 3300003215 | Bacteria | 7529 |
| 4 | Ga0055526_1000863 | 3300003771 | Bacteria | 22614 |
| 5 | Ga0065165_1001133 | 3300005262 | Bacteria | 31291 |
| 6 | Ga0070658_10042050 | 3300005327 | Bacteria | 3689 |
| 7 | Ga0070690_100006931 | 3300005330 | Bacteria | 6448 |
| 8 | Ga0070690_100008129 | 3300005330 | Bacteria | 6028 |
| 9 | Ga0070689_100013911 | 3300005340 | Bacteria | 5836 |
| 10 | Ga0070687_100007700 | 3300005343 | Bacteria | 4512 |
| 11 | Ga0070675_100043903 | 3300005354 | Bacteria | 3656 |
| 12 | Ga0070674_100048227 | 3300005356 | Bacteria | 2922 |
| 13 | Ga0070701_10002080 | 3300005438 | Bacteria | 7595 |
| 14 | Ga0070679_100038003 | 3300005530 | Bacteria | 4784 |
| 15 | Ga0070697_100056580 | 3300005536 | Bacteria | 3190 |
| 16 | Ga0068857_100032910 | 3300005577 | Bacteria | 4584 |
| 17 | Ga0068864_100000001 | 3300005618 | Bacteria | 686767 |
| 18 | Ga0068862_100052143 | 3300005844 | Bacteria | 3499 |
| 19 | Ga0081455_10003646 | 3300005937 | Bacteria | 17638 |
| 20 | Ga0081538_10037282 | 3300005981 | Bacteria | 3157 |
| 21 | Ga0081539_10003687 | 3300005985 | Bacteria | 18336 |
| 22 | Ga0075363_100020757 | 3300006048 | Bacteria | 3299 |
| 23 | Ga0070715_10000022 | 3300006163 | Bacteria | 118193 |
| 24 | Ga0070716_100000011 | 3300006173 | Bacteria | 143884 |
| 25 | Ga0075367_10032665 | 3300006178 | Bacteria | 2996 |
| 26 | Ga0075369_10009891 | 3300006186 | Bacteria | 3719 |
| 27 | Ga0075428_100084934 | 3300006844 | Bacteria | 3453 |
| 28 | Ga0075430_100006188 | 3300006846 | Bacteria | 10088 |
| 29 | Ga0075431_100005554 | 3300006847 | Bacteria | 12447 |
| 30 | Ga0075431_100026540 | 3300006847 | Bacteria | 5942 |
| 31 | Ga0075431_100081157 | 3300006847 | Bacteria | 3349 |
| 32 | Ga0075434_100093148 | 3300006871 | Bacteria | 3016 |
| 33 | Ga0075429_100023641 | 3300006880 | Bacteria | 5333 |
| 34 | Ga0111539_10000003 | 3300009094 | Bacteria | 880006 |
| 35 | Ga0111539_10092372 | 3300009094 | Bacteria | 3556 |
| 36 | Ga0105239_10081705 | 3300010375 | Bacteria | 3557 |
| 37 | Ga0157370_10105693 | 3300013104 | Bacteria | 2635 |
| 38 | Ga0157380_10025192 | 3300014326 | Bacteria | 4509 |
| 39 | Ga0209130_1000045 | 3300025284 | Bacteria | 240278 |
| 40 | Ga0209025_1000852 | 3300025294 | Bacteria | 48287 |
| 41 | Ga0209564_1001034 | 3300025295 | Bacteria | 34077 |
| 42 | Ga0209758_1000686 | 3300025297 | Bacteria | 50478 |
| 43 | Ga0207682_10006966 | 3300025893 | Bacteria | 4531 |
| 44 | Ga0207685_10000015 | 3300025905 | Bacteria | 170813 |
| 45 | Ga0207693_10002430 | 3300025915 | Bacteria | 16175 |
| 46 | Ga0207693_10003534 | 3300025915 | Bacteria | 13346 |
| 47 | Ga0207693_10016815 | 3300025915 | Bacteria | 5839 |
| 48 | Ga0207652_10039710 | 3300025921 | Bacteria | 3994 |
| 49 | Ga0207686_10016319 | 3300025934 | Bacteria | 4168 |
| 50 | Ga0207670_10030190 | 3300025936 | Bacteria | 3461 |
| 51 | Ga0207665_10000087 | 3300025939 | Bacteria | 60306 |
| 52 | Ga0207641_10124655 | 3300026088 | Bacteria | 2305 |
| 53 | Ga0207676_10000002 | 3300026095 | Bacteria | 1198607 |
| 54 | Ga0207674_10028345 | 3300026116 | Bacteria | 5912 |
| 55 | Ga0207428_10000001 | 3300027907 | Bacteria | 1034622 |
| 56 | Ga0268265_10019068 | 3300028380 | Bacteria | 4763 |
| 57 | Ga0265338_10006780 | 3300028800 | Bacteria | 14441 |
| 58 | Ga0265325_10003580 | 3300031241 | Bacteria | 10077 |
| 59 | Ga0265325_10005129 | 3300031241 | Bacteria | 8148 |
| 60 | Ga0265325_10006106 | 3300031241 | Bacteria | 7357 |
| 61 | Ga0265340_10008425 | 3300031247 | Bacteria | 5570 |
| 62 | Ga0265340_10025327 | 3300031247 | Bacteria | 3005 |
| 63 | Ga0265339_10000068 | 3300031249 | Bacteria | 91555 |
| 64 | Ga0307410_10072426 | 3300031852 | Bacteria | 2393 |
| 65 | Ga0307416_100028721 | 3300032002 | Bacteria | 4142 |
| 66 | Ga0316583_10013028 | 3300032133 | Bacteria | 2999 |
| 67 | Ga0373943_0000193 | 3300035170 | Bacteria | 24677 |
| 68 | Ga0373935_0007382 | 3300035692 | Bacteria | 6576 |
| 69 | Ga0373927_0001067 | 3300035695 | Bacteria | 20963 |
| 70 | Ga0373927_0024263 | 3300035695 | Bacteria | 3967 |
| 71 | Ga0373927_0037639 | 3300035695 | Bacteria | 3143 |
| 72 | Ga0373947_0000076 | 3300035725 | Bacteria | 49938 |
| 73 | Ga0373937_0001232 | 3300036401 | Bacteria | 21520 |
| 74 | Ga0373925_0039758 | 3300037068 | Bacteria | 3480 |
| 75 | Ga0395900_0006273 | 3300037418 | Bacteria | 12407 |
| 76 | Ga0400483_248975 | 3300039062 | Bacteria | 12816 |
| 77 | Ga0436365_0868535 | 3300039437 | Bacteria | 4238 |
| 78 | Ga0439460_0004885 | 3300042461 | Bacteria | 3275 |
| 79 | Ga0466958_0006651 | 3300045836 | Bacteria | 6306 |
| 80 | Ga0466967_0008743 | 3300045976 | Bacteria | 7460 |
| 81 | Ga0495629_0111073 | 3300046459 | Bacteria | 1911 |
| 82 | Ga0495664_0002805 | 3300046477 | Bacteria | 9367 |
| 83 | Ga0495665_0045003 | 3300046531 | Bacteria | 2344 |
| 84 | Ga0495634_0005388 | 3300046642 | Bacteria | 9857 |
| 85 | Ga0495634_0053381 | 3300046642 | Bacteria | 2707 |
| 86 | Ga0495635_0008914 | 3300046663 | Bacteria | 7002 |
| 87 | Ga0495635_0038040 | 3300046663 | Bacteria | 3331 |
| 88 | Ga0495599_0026174 | 3300046678 | Bacteria | 3655 |
| 89 | Ga0495646_0073113 | 3300046680 | Bacteria | 2015 |
| 90 | Ga0495624_0012266 | 3300046690 | Bacteria | 5865 |
| 91 | Ga0495581_0013863 | 3300047315 | Bacteria | 4672 |
| 92 | Ga0495672_0003750 | 3300047320 | Bacteria | 12813 |
| 93 | Ga0495684_0012237 | 3300047471 | Bacteria | 6619 |
| 94 | Ga0495684_0014480 | 3300047471 | Bacteria | 6069 |
| 95 | Ga0495684_0021820 | 3300047471 | Bacteria | 4928 |
| 96 | Ga0495593_0014002 | 3300047673 | Bacteria | 4567 |
| 97 | Ga0496102_0064743 | 3300048905 | Bacteria | 3349 |
| 98 | Ga0496104_0012239 | 3300048907 | Bacteria | 7712 |
| 99 | Ga0496105_0062334 | 3300048908 | Bacteria | 3077 |
| 100 | Ga0496110_0031149 | 3300048913 | Bacteria | 4600 |
| 101 | Ga0496110_0037239 | 3300048913 | Bacteria | 4228 |
| 102 | Ga0496111_0001884 | 3300048914 | Bacteria | 12408 |
| 103 | Ga0496113_0088431 | 3300048916 | Bacteria | 2383 |
| 104 | Ga0496114_0074602 | 3300048917 | Bacteria | 2855 |
| 105 | Ga0496115_0019986 | 3300048918 | Bacteria | 5160 |
| 106 | Ga0496115_0044498 | 3300048918 | Bacteria | 3541 |
| 107 | Ga0496115_0090004 | 3300048918 | Bacteria | 2507 |
| 108 | Ga0501031_0005549 | 3300049568 | Bacteria | 8214 |
| 109 | Ga0501032_0004479 | 3300049569 | Bacteria | 10517 |
| 110 | Ga0501034_0000046 | 3300049571 | Bacteria | 224049 |
| 111 | Ga0501034_0029153 | 3300049571 | Bacteria | 5611 |
| 112 | Ga0501034_0047349 | 3300049571 | Bacteria | 4342 |
| 113 | Ga0501036_0019371 | 3300049572 | Bacteria | 5712 |
| 114 | Ga0501036_0020453 | 3300049572 | Bacteria | 5560 |
| 115 | Ga0501037_0017675 | 3300049573 | Bacteria | 5249 |
| 116 | Ga0501038_0022861 | 3300049574 | Bacteria | 5597 |
| 117 | Ga0501039_0000076 | 3300049575 | Bacteria | 74183 |
| 118 | Ga0501046_0001018 | 3300049580 | Bacteria | 27339 |
| 119 | Ga0501047_0000386 | 3300049581 | Bacteria | 49479 |
| 120 | Ga0501047_0026279 | 3300049581 | Bacteria | 5600 |
| 121 | Ga0501047_0033226 | 3300049581 | Bacteria | 4980 |
| 122 | Ga0501067_0001735 | 3300049583 | Bacteria | 11990 |
| 123 | Ga0501067_0033024 | 3300049583 | Bacteria | 2873 |
| 124 | Ga0501073_0053175 | 3300049589 | Bacteria | 2835 |
| 125 | Ga0501079_0098176 | 3300049741 | Bacteria | 2271 |
| 126 | Ga0501080_0051341 | 3300049742 | Bacteria | 3837 |
| 127 | Ga0501080_0080609 | 3300049742 | Bacteria | 3025 |
| 128 | Ga0501035_0000104 | 3300049822 | Bacteria | 105594 |
| 129 | Ga0501035_0008993 | 3300049822 | Bacteria | 9289 |
| 130 | Ga0501044_0000020 | 3300049823 | Bacteria | 213460 |
| 131 | Ga0501044_0031591 | 3300049823 | Bacteria | 5572 |
| 132 | Ga0501044_0042602 | 3300049823 | Bacteria | 4720 |
| 133 | nmdc:mga03n38_21005_c1 | 3300050490 | Bacteria | 2621 |
| 134 | nmdc:mga03n38_2127_c1 | 3300050490 | Bacteria | 6018 |
| 135 | nmdc:mga0yw44_18650_c1 | 3300050492 | Bacteria | 3807 |
| 136 | nmdc:mga06z11_17693_c1 | 3300050494 | Bacteria | 3241 |
| 137 | nmdc:mga09592_1744_c1 | 3300050508 | Bacteria | 17486 |
| 138 | nmdc:mga09592_2493_c2 | 3300050508 | Bacteria | 7975 |
| 139 | nmdc:mga06r32_104800_c1 | 3300050510 | Bacteria | 2778 |
| 140 | nmdc:mga06r32_6015_c1 | 3300050510 | Bacteria | 10916 |
| 141 | nmdc:mga06r32_7093_c1 | 3300050510 | Bacteria | 10088 |
| 142 | nmdc:mga06r32_90384_c1 | 3300050510 | Bacteria | 2991 |
| 143 | nmdc:mga08y16_1_c1 | 3300050511 | Bacteria | 1034622 |
| 144 | nmdc:mga08x19_18_c1 | 3300050514 | Bacteria | 321445 |
| 145 | nmdc:mga0a205_89262_c1 | 3300050515 | Bacteria | 2979 |
| 146 | nmdc:mga0sz30_4963_c1 | 3300050516 | Bacteria | 2772 |
| 147 | Ga0495601_0014728 | 3300053077 | Bacteria | 4718 |
| 148 | Ga0495619_0012063 | 3300053085 | Bacteria | 5444 |
| 149 | Ga0500593_000072 | 3300053117 | Bacteria | 37884 |
| 150 | Ga0500559_0033956 | 3300053136 | Bacteria | 2198 |
| 151 | Ga0500568_0000005 | 3300053139 | Bacteria | 614296 |
| 152 | Ga0501082_0015348 | 3300060353 | Bacteria | 6591 |
| 153 | Ga0501082_0022212 | 3300060353 | Bacteria | 5468 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046459 | Ga0495629_0111073 | Ga0495629_0111073_154_1899 | 578 |
| 2 | 3300046642 | Ga0495634_0053381 | Ga0495634_0053381_842_2695 | 598 |
| 3 | 3300046680 | Ga0495646_0073113 | Ga0495646_0073113_43_1896 | 598 |
| 4 | 3300035695 | Ga0373927_0037639 | Ga0373927_0037639_17_1894 | 600 |
| 5 | 3300049583 | Ga0501067_0033024 | Ga0501067_0033024_935_2800 | 613 |
| 6 | 3300053136 | Ga0500559_0033956 | Ga0500559_0033956_41_1912 | 613 |
| 7 | 3300005577 | Ga0068857_100032910 | Ga0068857_1000329102 | 628 |
| 8 | 3300026116 | Ga0207674_10028345 | Ga0207674_100283453 | 628 |
| 9 | 3300049742 | Ga0501080_0080609 | Ga0501080_0080609_47_1987 | 634 |
| 10 | 3300006871 | Ga0075434_100093148 | Ga0075434_1000931482 | 644 |
| 11 | 3300014326 | Ga0157380_10025192 | Ga0157380_100251923 | 645 |
| 12 | 3300005618 | Ga0068864_100000001 | Ga0068864_100000001278 | 649 |
| 13 | 3300026095 | Ga0207676_10000002 | Ga0207676_10000002556 | 649 |
| 14 | iso_pu_bacteria | 8054563764 | 8054566026 | 649 |
| 15 | 3300047320 | Ga0495672_0003750 | Ga0495672_0003750_9432_11408 | 650 |
| 16 | 3300005438 | Ga0070701_10002080 | Ga0070701_100020803 | 652 |
| 17 | 3300025934 | Ga0207686_10016319 | Ga0207686_100163192 | 652 |
| 18 | 3300050490 | nmdc:mga03n38_2127_c1 | nmdc:mga03n38_2127_c1_1274_3238 | 652 |
| 19 | 3300050508 | nmdc:mga09592_2493_c2 | nmdc:mga09592_2493_c2_225_2231 | 652 |
| 20 | 3300050510 | nmdc:mga06r32_7093_c1 | nmdc:mga06r32_7093_c1_2654_4660 | 652 |
| 21 | 3300009094 | Ga0111539_10000003 | Ga0111539_10000003290 | 654 |
| 22 | 3300027907 | Ga0207428_10000001 | Ga0207428_10000001441 | 654 |
| 23 | 3300050511 | nmdc:mga08y16_1_c1 | nmdc:mga08y16_1_c1_561696_563699 | 654 |
| 24 | 3300006846 | Ga0075430_100006188 | Ga0075430_1000061883 | 655 |
| 25 | 3300006847 | Ga0075431_100026540 | Ga0075431_1000265403 | 655 |
| 26 | 3300006880 | Ga0075429_100023641 | Ga0075429_1000236414 | 655 |
| 27 | 3300053117 | Ga0500593_000072 | Ga0500593_000072_9961_11976 | 656 |
| 28 | 3300010375 | Ga0105239_10081705 | Ga0105239_100817052 | 660 |
| 29 | 3300039437 | Ga0436365_0868535 | Ga0436365_0868535_2041_4092 | 660 |
| 30 | 3300005530 | Ga0070679_100038003 | Ga0070679_1000380031 | 661 |
| 31 | 3300025921 | Ga0207652_10039710 | Ga0207652_100397102 | 661 |
| 32 | 3300035695 | Ga0373927_0024263 | Ga0373927_0024263_1049_3121 | 661 |
| 33 | 3300046477 | Ga0495664_0002805 | Ga0495664_0002805_6076_8148 | 661 |
| 34 | 3300046663 | Ga0495635_0008914 | Ga0495635_0008914_1667_3739 | 661 |
| 35 | 3300047471 | Ga0495684_0021820 | Ga0495684_0021820_789_2861 | 661 |
| 36 | 3300053085 | Ga0495619_0012063 | Ga0495619_0012063_1555_3627 | 661 |
| 37 | iso_pu_bacteria | 2643221736 | 2644746482 | 661 |
| 38 | iso_pu_bacteria | 2841760612 | 2841765004 | 661 |
| 39 | iso_pu_bacteria | 2844104063 | 2844107548 | 661 |
| 40 | iso_pu_bacteria | 2851182111 | 2851183705 | 661 |
| 41 | iso_pu_bacteria | 2851246043 | 2851249654 | 661 |
| 42 | 3300032002 | Ga0307416_100028721 | Ga0307416_1000287213 | 662 |
| 43 | 3300046531 | Ga0495665_0045003 | Ga0495665_0045003_119_2191 | 662 |
| 44 | 3300046642 | Ga0495634_0005388 | Ga0495634_0005388_6986_9058 | 662 |
| 45 | 3300047471 | Ga0495684_0014480 | Ga0495684_0014480_3277_5349 | 662 |
| 46 | 3300049581 | Ga0501047_0026279 | Ga0501047_0026279_3514_5574 | 662 |
| 47 | 3300049742 | Ga0501080_0051341 | Ga0501080_0051341_1231_3291 | 662 |
| 48 | 3300049823 | Ga0501044_0031591 | Ga0501044_0031591_506_2566 | 662 |
| 49 | iso_pu_bacteria | 2909042592 | 2909044457 | 663 |
| 50 | iso_pu_bacteria | 2939669807 | 2939673278 | 663 |
| 51 | 3300005343 | Ga0070687_100007700 | Ga0070687_1000077002 | 664 |
| 52 | 3300039062 | Ga0400483_248975 | Ga0400483_248975_9554_11572 | 664 |
| 53 | 3300002987 | JGI25159J45721_1007301 | JGI25159J45721_10073012 | 665 |
| 54 | 3300005262 | Ga0065165_1001133 | Ga0065165_100113316 | 665 |
| 55 | 3300025284 | Ga0209130_1000045 | Ga0209130_1000045217 | 665 |
| 56 | 3300025294 | Ga0209025_1000852 | Ga0209025_100085226 | 665 |
| 57 | 3300031852 | Ga0307410_10072426 | Ga0307410_100724261 | 665 |
| 58 | 3300003771 | Ga0055526_1000863 | Ga0055526_100086318 | 666 |
| 59 | 3300005844 | Ga0068862_100052143 | Ga0068862_1000521433 | 666 |
| 60 | 3300006847 | Ga0075431_100081157 | Ga0075431_1000811571 | 666 |
| 61 | 3300025295 | Ga0209564_1001034 | Ga0209564_100103419 | 666 |
| 62 | 3300028380 | Ga0268265_10019068 | Ga0268265_100190682 | 666 |
| 63 | 3300005536 | Ga0070697_100056580 | Ga0070697_1000565802 | 667 |
| 64 | 3300053139 | Ga0500568_0000005 | Ga0500568_0000005_222674_224686 | 667 |
| 65 | 3300037418 | Ga0395900_0006273 | Ga0395900_0006273_9705_11738 | 669 |
| 66 | 3300048905 | Ga0496102_0064743 | Ga0496102_0064743_538_2562 | 669 |
| 67 | 3300049569 | Ga0501032_0004479 | Ga0501032_0004479_3117_5150 | 669 |
| 68 | 3300049571 | Ga0501034_0000046 | Ga0501034_0000046_31106_33139 | 669 |
| 69 | 3300049571 | Ga0501034_0029153 | Ga0501034_0029153_1125_3158 | 669 |
| 70 | 3300049572 | Ga0501036_0019371 | Ga0501036_0019371_1092_3125 | 669 |
| 71 | 3300049573 | Ga0501037_0017675 | Ga0501037_0017675_1049_3082 | 669 |
| 72 | 3300049574 | Ga0501038_0022861 | Ga0501038_0022861_2230_4263 | 669 |
| 73 | 3300049575 | Ga0501039_0000076 | Ga0501039_0000076_51842_53875 | 669 |
| 74 | 3300049580 | Ga0501046_0001018 | Ga0501046_0001018_20707_22740 | 669 |
| 75 | 3300049581 | Ga0501047_0000386 | Ga0501047_0000386_27922_29955 | 669 |
| 76 | 3300049581 | Ga0501047_0033226 | Ga0501047_0033226_1485_3518 | 669 |
| 77 | 3300049583 | Ga0501067_0001735 | Ga0501067_0001735_3286_5319 | 669 |
| 78 | 3300049589 | Ga0501073_0053175 | Ga0501073_0053175_786_2819 | 669 |
| 79 | 3300049822 | Ga0501035_0000104 | Ga0501035_0000104_72213_74246 | 669 |
| 80 | 3300049823 | Ga0501044_0000020 | Ga0501044_0000020_32944_34977 | 669 |
| 81 | 3300050515 | nmdc:mga0a205_89262_c1 | nmdc:mga0a205_89262_c1_945_2969 | 669 |
| 82 | 3300060353 | Ga0501082_0015348 | Ga0501082_0015348_4263_6296 | 669 |
| 83 | 3300006163 | Ga0070715_10000022 | Ga0070715_1000002299 | 671 |
| 84 | 3300006173 | Ga0070716_100000011 | Ga0070716_10000001111 | 671 |
| 85 | 3300025905 | Ga0207685_10000015 | Ga0207685_1000001566 | 671 |
| 86 | 3300025939 | Ga0207665_10000087 | Ga0207665_1000008747 | 671 |
| 87 | 3300003215 | JGI25153J46596_10004479 | JGI25153J46596_100044795 | 673 |
| 88 | 3300025297 | Ga0209758_1000686 | Ga0209758_100068623 | 673 |
| 89 | 3300032133 | Ga0316583_10013028 | Ga0316583_100130282 | 673 |
| 90 | 3300050510 | nmdc:mga06r32_104800_c1 | nmdc:mga06r32_104800_c1_68_2134 | 673 |
| 91 | 3300005985 | Ga0081539_10003687 | Ga0081539_100036877 | 674 |
| 92 | 3300031241 | Ga0265325_10005129 | Ga0265325_100051298 | 674 |
| 93 | 3300005354 | Ga0070675_100043903 | Ga0070675_1000439031 | 675 |
| 94 | 3300005937 | Ga0081455_10003646 | Ga0081455_100036462 | 675 |
| 95 | 3300005981 | Ga0081538_10037282 | Ga0081538_100372821 | 675 |
| 96 | 3300006844 | Ga0075428_100084934 | Ga0075428_1000849342 | 675 |
| 97 | 3300006847 | Ga0075431_100005554 | Ga0075431_1000055544 | 675 |
| 98 | 3300009094 | Ga0111539_10092372 | Ga0111539_100923722 | 675 |
| 99 | 3300025915 | Ga0207693_10002430 | Ga0207693_100024306 | 675 |
| 100 | 3300049571 | Ga0501034_0047349 | Ga0501034_0047349_431_2464 | 675 |
| 101 | 3300050508 | nmdc:mga09592_1744_c1 | nmdc:mga09592_1744_c1_4397_6475 | 675 |
| 102 | 3300050510 | nmdc:mga06r32_6015_c1 | nmdc:mga06r32_6015_c1_6003_8081 | 675 |
| 103 | 3300050514 | nmdc:mga08x19_18_c1 | nmdc:mga08x19_18_c1_181555_183663 | 675 |
| 104 | 3300013104 | Ga0157370_10105693 | Ga0157370_101056932 | 676 |
| 105 | 3300031247 | Ga0265340_10025327 | Ga0265340_100253273 | 676 |
| 106 | 3300036401 | Ga0373937_0001232 | Ga0373937_0001232_13627_15678 | 676 |
| 107 | 3300045976 | Ga0466967_0008743 | Ga0466967_0008743_1888_3918 | 676 |
| 108 | 3300048918 | Ga0496115_0090004 | Ga0496115_0090004_362_2461 | 676 |
| 109 | 3300049568 | Ga0501031_0005549 | Ga0501031_0005549_112_2163 | 676 |
| 110 | 3300049572 | Ga0501036_0020453 | Ga0501036_0020453_467_2518 | 676 |
| 111 | 3300049822 | Ga0501035_0008993 | Ga0501035_0008993_364_2415 | 676 |
| 112 | 3300049823 | Ga0501044_0042602 | Ga0501044_0042602_364_2415 | 676 |
| 113 | 3300050510 | nmdc:mga06r32_90384_c1 | nmdc:mga06r32_90384_c1_65_2095 | 676 |
| 114 | 3300060353 | Ga0501082_0022212 | Ga0501082_0022212_2071_4131 | 676 |
| 115 | 3300000041 | ARcpr5oldR_c000196 | ARcpr5oldR_0001963 | 677 |
| 116 | 3300005327 | Ga0070658_10042050 | Ga0070658_100420502 | 677 |
| 117 | 3300005330 | Ga0070690_100006931 | Ga0070690_1000069312 | 677 |
| 118 | 3300005330 | Ga0070690_100008129 | Ga0070690_1000081294 | 677 |
| 119 | 3300005340 | Ga0070689_100013911 | Ga0070689_1000139113 | 677 |
| 120 | 3300005356 | Ga0070674_100048227 | Ga0070674_1000482273 | 677 |
| 121 | 3300006048 | Ga0075363_100020757 | Ga0075363_1000207573 | 677 |
| 122 | 3300006178 | Ga0075367_10032665 | Ga0075367_100326652 | 677 |
| 123 | 3300006186 | Ga0075369_10009891 | Ga0075369_100098912 | 677 |
| 124 | 3300025893 | Ga0207682_10006966 | Ga0207682_100069663 | 677 |
| 125 | 3300025915 | Ga0207693_10003534 | Ga0207693_100035346 | 677 |
| 126 | 3300025915 | Ga0207693_10016815 | Ga0207693_100168154 | 677 |
| 127 | 3300025936 | Ga0207670_10030190 | Ga0207670_100301903 | 677 |
| 128 | 3300026088 | Ga0207641_10124655 | Ga0207641_101246551 | 677 |
| 129 | 3300028800 | Ga0265338_10006780 | Ga0265338_100067804 | 677 |
| 130 | 3300031241 | Ga0265325_10003580 | Ga0265325_100035808 | 677 |
| 131 | 3300031241 | Ga0265325_10006106 | Ga0265325_100061063 | 677 |
| 132 | 3300031247 | Ga0265340_10008425 | Ga0265340_100084253 | 677 |
| 133 | 3300031249 | Ga0265339_10000068 | Ga0265339_1000006858 | 677 |
| 134 | 3300035170 | Ga0373943_0000193 | Ga0373943_0000193_13866_15923 | 677 |
| 135 | 3300035692 | Ga0373935_0007382 | Ga0373935_0007382_4213_6426 | 677 |
| 136 | 3300035695 | Ga0373927_0001067 | Ga0373927_0001067_3475_5532 | 677 |
| 137 | 3300035725 | Ga0373947_0000076 | Ga0373947_0000076_22036_24093 | 677 |
| 138 | 3300037068 | Ga0373925_0039758 | Ga0373925_0039758_638_2695 | 677 |
| 139 | 3300042461 | Ga0439460_0004885 | Ga0439460_0004885_810_2843 | 677 |
| 140 | 3300045836 | Ga0466958_0006651 | Ga0466958_0006651_686_2734 | 677 |
| 141 | 3300046663 | Ga0495635_0038040 | Ga0495635_0038040_333_2390 | 677 |
| 142 | 3300046678 | Ga0495599_0026174 | Ga0495599_0026174_1410_3500 | 677 |
| 143 | 3300046690 | Ga0495624_0012266 | Ga0495624_0012266_1118_3175 | 677 |
| 144 | 3300047315 | Ga0495581_0013863 | Ga0495581_0013863_1398_3455 | 677 |
| 145 | 3300047471 | Ga0495684_0012237 | Ga0495684_0012237_2382_4439 | 677 |
| 146 | 3300047673 | Ga0495593_0014002 | Ga0495593_0014002_2495_4552 | 677 |
| 147 | 3300048907 | Ga0496104_0012239 | Ga0496104_0012239_52_2229 | 677 |
| 148 | 3300048908 | Ga0496105_0062334 | Ga0496105_0062334_204_2504 | 677 |
| 149 | 3300048913 | Ga0496110_0031149 | Ga0496110_0031149_331_2391 | 677 |
| 150 | 3300048913 | Ga0496110_0037239 | Ga0496110_0037239_1846_3879 | 677 |
| 151 | 3300048914 | Ga0496111_0001884 | Ga0496111_0001884_9810_11870 | 677 |
| 152 | 3300048916 | Ga0496113_0088431 | Ga0496113_0088431_103_2163 | 677 |
| 153 | 3300048917 | Ga0496114_0074602 | Ga0496114_0074602_491_2551 | 677 |
| 154 | 3300048918 | Ga0496115_0019986 | Ga0496115_0019986_893_2953 | 677 |
| 155 | 3300048918 | Ga0496115_0044498 | Ga0496115_0044498_151_2328 | 677 |
| 156 | 3300049741 | Ga0501079_0098176 | Ga0501079_0098176_81_2129 | 677 |
| 157 | 3300050490 | nmdc:mga03n38_21005_c1 | nmdc:mga03n38_21005_c1_341_2464 | 677 |
| 158 | 3300050492 | nmdc:mga0yw44_18650_c1 | nmdc:mga0yw44_18650_c1_930_3053 | 677 |
| 159 | 3300050494 | nmdc:mga06z11_17693_c1 | nmdc:mga06z11_17693_c1_445_2568 | 677 |
| 160 | 3300050516 | nmdc:mga0sz30_4963_c1 | nmdc:mga0sz30_4963_c1_568_2691 | 677 |
| 161 | 3300053077 | Ga0495601_0014728 | Ga0495601_0014728_1734_3767 | 677 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7tkv-assembly1.cif.gz_B | crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus | 0.9618 | 10 | 627 |
| 7tkv-assembly1.cif.gz_B | crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus | 0.9557 | 10 | 627 |
| 7tkv-assembly1.cif.gz_A | crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus | 0.932 | 9 | 670 |
| 3ira-assembly1.cif.gz_A | the crystal structure of one domain of the conserved protein from methanosarcina mazei go1 | 0.9296 | 9 | 173 |
| 7tkv-assembly1.cif.gz_A | crystal structure of the thioredox_dsbh domain-containing uncharacterized protein bab1_2064 from brucella abortus | 0.9277 | 9 | 670 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_O53432_8_170_3.40.30.10 | Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin | 0.9787 | 10 | 175 | 3.40.30.10 |
| af_Q6T393_64_232_3.40.30.10 | Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin | 0.9601 | 10 | 170 | 3.40.30.10 |
| af_O53432_8_170_3.40.30.10 | Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin | 0.9551 | 10 | 175 | 3.40.30.10 |
| af_O53432_177_332_1.50.10.20 | Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; | 0.9476 | 182 | 335 | 1.50.10.20 |
| af_Q8TB22_239_408_1.50.10.20 | Mainly Alpha;Alpha/alpha barrel;Glycosyltransferase; | 0.9415 | 184 | 342 | 1.50.10.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7Y3FXR5-F1-model_v4 | DUF255 domain-containing protein | 0.9919 | 10 | 99 |
|
| AF-A0A348S2W9-F1-model_v4 | Thioredoxin domain-containing protein | 0.9879 | 9 | 89 |
|
| AF-A0A7C7IY43-F1-model_v4 | DUF255 domain-containing protein | 0.9871 | 10 | 88 |
|
| AF-A0A7J9VIK1-F1-model_v4 | DUF255 domain-containing protein | 0.987 | 10 | 91 |
|
| AF-A0A353B7L6-F1-model_v4 | Thioredoxin domain-containing protein | 0.9861 | 10 | 132 |
|
Predicted Structure (AlphaFold2)
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