F237477

General Info

Members Datasets Scaffolds Average Seq Length
161 95 322 222

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0779694|Ga0436364_0779694_381_1073
Length 230
Sequence LQAEENSLSRRLVVIRERIARAARRTNRDPAGILLLAVTKVFPAAIIREAYDLGLRDFGENYVQEFERKASEVRSLAGARFHFIGHLQSNKSASAAELFEVIQTVDSPKLARRLDAASKTVAGKPLDVMLEVKLAEEEAKSGVPPDQLPELVAAVRDCAHLRLLGLMTMPPWSEDAERSRPYFRRLRELAERHELTQLSMGMSNDFEVAIEEGASCVRIGTALFGKRRKV

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
53 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
54 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
55 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
56 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
57 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
58 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
63 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
64 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
65 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
66 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
67 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
68 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
69 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
70 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
71 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
72 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
73 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
74 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
75 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
78 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
79 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
80 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
81 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
82 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
83 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
84 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
85 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
86 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
87 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
88 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
89 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
90 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
91 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
92 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
93 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
94 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
95 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.14
Stem 0
Stem Tuber 0
Unclassified 22.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_0779694 3300037853 Unclassified 1145
2 Ga0070658_10174738 3300005327 Unclassified 1806
3 Ga0070683_100000004 3300005329 Bacteria 373231
4 Ga0070683_100068233 3300005329 Unclassified 3313
5 Ga0070683_100310329 3300005329 Bacteria 1501
6 Ga0070690_100289429 3300005330 Bacteria 1171
7 Ga0070713_100015406 3300005436 Bacteria 5714
8 Ga0070713_100075450 3300005436 Unclassified 2859
9 Ga0070711_100021190 3300005439 Unclassified 4198
10 Ga0070706_100057361 3300005467 Unclassified 3594
11 Ga0070684_100000142 3300005535 Bacteria 47988
12 Ga0070684_100161470 3300005535 Unclassified 2033
13 Ga0070684_100365041 3300005535 Bacteria 1329
14 Ga0070686_100328077 3300005544 Bacteria 1143
15 Ga0070696_100003172 3300005546 Bacteria 10947
16 Ga0070696_100470645 3300005546 Bacteria 995
17 Ga0070696_100638593 3300005546 Unclassified 862
18 Ga0070665_100943718 3300005548 Bacteria 875
19 Ga0068855_100378767 3300005563 Unclassified 1554
20 Ga0068864_100514844 3300005618 Unclassified 1153
21 Ga0068863_100265951 3300005841 Bacteria 1659
22 Ga0068863_100774871 3300005841 Bacteria 956
23 Ga0070717_10004207 3300006028 Bacteria 10380
24 Ga0070715_10056663 3300006163 Unclassified 1705
25 Ga0097621_100347166 3300006237 Bacteria 1319
26 Ga0075436_100010509 3300006914 Bacteria 6349
27 Ga0105240_10073136 3300009093 Bacteria 4234
28 Ga0105240_10506130 3300009093 Bacteria 1342
29 Ga0105245_10117893 3300009098 Bacteria 2477
30 Ga0105245_10518694 3300009098 Bacteria 1210
31 Ga0105241_10145398 3300009174 Bacteria 1934
32 Ga0105248_10021748 3300009177 Bacteria 7107
33 Ga0105237_10012812 3300009545 Bacteria 8820
34 Ga0105237_10085331 3300009545 Unclassified 3147
35 Ga0105237_10766553 3300009545 Bacteria 971
36 Ga0105238_10163963 3300009551 Bacteria 2198
37 Ga0105238_10270604 3300009551 Bacteria 1679
38 Ga0105238_10461140 3300009551 Bacteria 1268
39 Ga0105239_10164549 3300010375 Bacteria 2480
40 Ga0157370_10567665 3300013104 Unclassified 1040
41 Ga0157369_10064894 3300013105 Bacteria 3932
42 Ga0157369_10266925 3300013105 Unclassified 1784
43 Ga0157375_10297141 3300013308 Bacteria 1778
44 Ga0157375_10470421 3300013308 Bacteria 1422
45 Ga0163163_10090280 3300014325 Bacteria 3077
46 Ga0163163_10178583 3300014325 Bacteria 2170
47 Ga0213876_10104803 3300021384 Bacteria 1500
48 Ga0207699_10062044 3300025906 Bacteria 2252
49 Ga0207699_10107381 3300025906 Unclassified 1783
50 Ga0207705_10299592 3300025909 Bacteria 1233
51 Ga0207684_10061258 3300025910 Unclassified 3196
52 Ga0207707_10023827 3300025912 Bacteria 5353
53 Ga0207695_10011370 3300025913 Bacteria 10789
54 Ga0207695_10230142 3300025913 Unclassified 1758
55 Ga0207695_10449252 3300025913 Unclassified 1172
56 Ga0207671_10437726 3300025914 Bacteria 1041
57 Ga0207694_10097174 3300025924 Unclassified 2330
58 Ga0207694_10172499 3300025924 Bacteria 1752
59 Ga0207687_10332946 3300025927 Bacteria 1232
60 Ga0207700_10012002 3300025928 Bacteria 5560
61 Ga0207700_10050431 3300025928 Bacteria 3102
62 Ga0207670_10245322 3300025936 Bacteria 1382
63 Ga0207711_10150599 3300025941 Bacteria 2099
64 Ga0207689_10497053 3300025942 Bacteria 1022
65 Ga0207661_10000017 3300025944 Bacteria 289163
66 Ga0207661_10049841 3300025944 Unclassified 3335
67 Ga0207667_10623046 3300025949 Unclassified 1086
68 Ga0207712_10211271 3300025961 Bacteria 1545
69 Ga0207641_10233255 3300026088 Bacteria 1711
70 Ga0207641_10586828 3300026088 Unclassified 1090
71 Ga0207676_10221086 3300026095 Bacteria 1687
72 Ga0268266_10405270 3300028379 Bacteria 1290
73 Ga0268266_10578528 3300028379 Bacteria 1078
74 Ga0265331_10028939 3300031250 Bacteria 2768
75 Ga0265316_10000253 3300031344 Bacteria 60909
76 Ga0265316_10215785 3300031344 Bacteria 1417
77 Ga0265314_10021836 3300031711 Bacteria 4912
78 Ga0373954_0002469 3300035118 Bacteria 7758
79 Ga0373954_0121762 3300035118 Bacteria 1267
80 Ga0373946_0152887 3300035171 Bacteria 1078
81 Ga0373955_0069033 3300035172 Bacteria 1971
82 Ga0373955_0078375 3300035172 Bacteria 1862
83 Ga0373955_0353631 3300035172 Bacteria 890
84 Ga0373935_0013350 3300035692 Bacteria 4955
85 Ga0373935_0363252 3300035692 Bacteria 1034
86 Ga0373927_0011410 3300035695 Bacteria 5919
87 Ga0373927_0232982 3300035695 Bacteria 1210
88 Ga0373925_0052774 3300037068 Bacteria 3038
89 Ga0373925_0706990 3300037068 Bacteria 831
90 Ga0436364_1082086 3300037853 Bacteria 4444
91 Ga0466963_0238851 3300044694 Bacteria 1274
92 Ga0453684_0187756 3300044712 Bacteria 2420
93 Ga0466959_0440489 3300045049 Bacteria 884
94 Ga0451576_0010552 3300045051 Bacteria 10581
95 Ga0495592_0038148 3300046454 Bacteria 3615
96 Ga0495651_0081127 3300046462 Bacteria 2449
97 Ga0495651_0412169 3300046462 Unclassified 880
98 Ga0495653_0305862 3300046463 Bacteria 1035
99 Ga0495580_0001144 3300046472 Bacteria 23366
100 Ga0495580_0008418 3300046472 Bacteria 8205
101 Ga0495580_0031807 3300046472 Unclassified 3811
102 Ga0495580_0063688 3300046472 Unclassified 2585
103 Ga0495580_0174447 3300046472 Bacteria 1485
104 Ga0495580_0244689 3300046472 Bacteria 1229
105 Ga0495580_0246265 3300046472 Bacteria 1224
106 Ga0495580_0254764 3300046472 Unclassified 1201
107 Ga0495662_0032476 3300046476 Bacteria 2521
108 Ga0495662_0144209 3300046476 Bacteria 1173
109 Ga0495664_0030264 3300046477 Bacteria 3170
110 Ga0495664_0347559 3300046477 Bacteria 893
111 Ga0495594_0051092 3300046499 Unclassified 2275
112 Ga0495594_0439887 3300046499 Bacteria 741
113 Ga0495608_0272838 3300046511 Bacteria 1051
114 Ga0495618_0249520 3300046514 Unclassified 1114
115 Ga0495628_0016981 3300046516 Bacteria 6065
116 Ga0495628_0250306 3300046516 Bacteria 1323
117 Ga0495628_0366935 3300046516 Bacteria 1056
118 Ga0495630_0530990 3300046517 Bacteria 902
119 Ga0495665_0008571 3300046531 Bacteria 5549
120 Ga0495640_0128189 3300046533 Unclassified 1644
121 Ga0495645_0010828 3300046543 Bacteria 6407
122 Ga0495645_0084452 3300046543 Bacteria 2274
123 Ga0495645_0142712 3300046543 Unclassified 1670
124 Ga0495645_0384638 3300046543 Bacteria 897
125 Ga0495667_0046826 3300046559 Unclassified 2858
126 Ga0495667_0089759 3300046559 Bacteria 1992
127 Ga0495667_0494749 3300046559 Viruses 766
128 Ga0495634_0436535 3300046642 Unclassified 774
129 Ga0495635_0080366 3300046663 Bacteria 2231
130 Ga0495657_0247649 3300046675 Unclassified 1074
131 Ga0495599_0044175 3300046678 Bacteria 2795
132 Ga0495599_0183421 3300046678 Bacteria 1289
133 Ga0495599_0393487 3300046678 Unclassified 826
134 Ga0495599_0413644 3300046678 Bacteria 802
135 Ga0495623_0132668 3300046679 Bacteria 1489
136 Ga0495613_0097904 3300046689 Unclassified 2120
137 Ga0495624_0441710 3300046690 Unclassified 780
138 Ga0495600_0125873 3300046809 Bacteria 1667
139 Ga0495604_0179468 3300047317 Bacteria 1482
140 Ga0495604_0245905 3300047317 Bacteria 1221
141 Ga0495674_0043711 3300047319 Bacteria 3986
142 Ga0495674_0051893 3300047319 Bacteria 3613
143 Ga0495674_0059706 3300047319 Bacteria 3330
144 Ga0495674_0081450 3300047319 Bacteria 2777
145 Ga0495674_0090427 3300047319 Unclassified 2616
146 Ga0495674_0500059 3300047319 Bacteria 972
147 Ga0495680_0214088 3300047322 Bacteria 1378
148 Ga0495675_0025211 3300047444 Bacteria 3792
149 Ga0495675_0180418 3300047444 Bacteria 1293
150 Ga0495675_0186746 3300047444 Bacteria 1267
151 Ga0495684_0001189 3300047471 Bacteria 20997
152 Ga0495684_0002669 3300047471 Bacteria 14135
153 Ga0495684_0190092 3300047471 Bacteria 1518
154 Ga0495684_0258917 3300047471 Bacteria 1263
155 Ga0495602_0049212 3300048088 Bacteria 3778
156 Ga0495602_0073383 3300048088 Bacteria 2913
157 Ga0495614_0195990 3300048089 Bacteria 913
158 Ga0501073_0591245 3300049589 Bacteria 767
159 nmdc:mga08x19_4812_c1 3300050514 Bacteria 8000
160 Ga0501084_0526749 3300054114 Bacteria 999
161 Ga0501082_0003931 3300060353 Bacteria 12962
162 Ga0436364_0779694
163 Ga0070658_10174738
164 Ga0070683_100000004
165 Ga0070683_100068233
166 Ga0070683_100310329
167 Ga0070690_100289429
168 Ga0070713_100015406
169 Ga0070713_100075450
170 Ga0070711_100021190
171 Ga0070706_100057361
172 Ga0070684_100000142
173 Ga0070684_100161470
174 Ga0070684_100365041
175 Ga0070686_100328077
176 Ga0070696_100003172
177 Ga0070696_100470645
178 Ga0070696_100638593
179 Ga0070665_100943718
180 Ga0068855_100378767
181 Ga0068864_100514844
182 Ga0068863_100265951
183 Ga0068863_100774871
184 Ga0070717_10004207
185 Ga0070715_10056663
186 Ga0097621_100347166
187 Ga0075436_100010509
188 Ga0105240_10073136
189 Ga0105240_10506130
190 Ga0105245_10117893
191 Ga0105245_10518694
192 Ga0105241_10145398
193 Ga0105248_10021748
194 Ga0105237_10012812
195 Ga0105237_10085331
196 Ga0105237_10766553
197 Ga0105238_10163963
198 Ga0105238_10270604
199 Ga0105238_10461140
200 Ga0105239_10164549
201 Ga0157370_10567665
202 Ga0157369_10064894
203 Ga0157369_10266925
204 Ga0157375_10297141
205 Ga0157375_10470421
206 Ga0163163_10090280
207 Ga0163163_10178583
208 Ga0213876_10104803
209 Ga0207699_10062044
210 Ga0207699_10107381
211 Ga0207705_10299592
212 Ga0207684_10061258
213 Ga0207707_10023827
214 Ga0207695_10011370
215 Ga0207695_10230142
216 Ga0207695_10449252
217 Ga0207671_10437726
218 Ga0207694_10097174
219 Ga0207694_10172499
220 Ga0207687_10332946
221 Ga0207700_10012002
222 Ga0207700_10050431
223 Ga0207670_10245322
224 Ga0207711_10150599
225 Ga0207689_10497053
226 Ga0207661_10000017
227 Ga0207661_10049841
228 Ga0207667_10623046
229 Ga0207712_10211271
230 Ga0207641_10233255
231 Ga0207641_10586828
232 Ga0207676_10221086
233 Ga0268266_10405270
234 Ga0268266_10578528
235 Ga0265331_10028939
236 Ga0265316_10000253
237 Ga0265316_10215785
238 Ga0265314_10021836
239 Ga0373954_0002469
240 Ga0373954_0121762
241 Ga0373946_0152887
242 Ga0373955_0069033
243 Ga0373955_0078375
244 Ga0373955_0353631
245 Ga0373935_0013350
246 Ga0373935_0363252
247 Ga0373927_0011410
248 Ga0373927_0232982
249 Ga0373925_0052774
250 Ga0373925_0706990
251 Ga0436364_1082086
252 Ga0466963_0238851
253 Ga0453684_0187756
254 Ga0466959_0440489
255 Ga0451576_0010552
256 Ga0495592_0038148
257 Ga0495651_0081127
258 Ga0495651_0412169
259 Ga0495653_0305862
260 Ga0495580_0001144
261 Ga0495580_0008418
262 Ga0495580_0031807
263 Ga0495580_0063688
264 Ga0495580_0174447
265 Ga0495580_0244689
266 Ga0495580_0246265
267 Ga0495580_0254764
268 Ga0495662_0032476
269 Ga0495662_0144209
270 Ga0495664_0030264
271 Ga0495664_0347559
272 Ga0495594_0051092
273 Ga0495594_0439887
274 Ga0495608_0272838
275 Ga0495618_0249520
276 Ga0495628_0016981
277 Ga0495628_0250306
278 Ga0495628_0366935
279 Ga0495630_0530990
280 Ga0495665_0008571
281 Ga0495640_0128189
282 Ga0495645_0010828
283 Ga0495645_0084452
284 Ga0495645_0142712
285 Ga0495645_0384638
286 Ga0495667_0046826
287 Ga0495667_0089759
288 Ga0495667_0494749
289 Ga0495634_0436535
290 Ga0495635_0080366
291 Ga0495657_0247649
292 Ga0495599_0044175
293 Ga0495599_0183421
294 Ga0495599_0393487
295 Ga0495599_0413644
296 Ga0495623_0132668
297 Ga0495613_0097904
298 Ga0495624_0441710
299 Ga0495600_0125873
300 Ga0495604_0179468
301 Ga0495604_0245905
302 Ga0495674_0043711
303 Ga0495674_0051893
304 Ga0495674_0059706
305 Ga0495674_0081450
306 Ga0495674_0090427
307 Ga0495674_0500059
308 Ga0495680_0214088
309 Ga0495675_0025211
310 Ga0495675_0180418
311 Ga0495675_0186746
312 Ga0495684_0001189
313 Ga0495684_0002669
314 Ga0495684_0190092
315 Ga0495684_0258917
316 Ga0495602_0049212
317 Ga0495602_0073383
318 Ga0495614_0195990
319 Ga0501073_0591245
320 nmdc:mga08x19_4812_c1
321 Ga0501084_0526749
322 Ga0501082_0003931

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01168

Ala_racemase_N

Alanine racemase, N-terminal domain

12

228

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
1w8g-assembly1.cif.gz_A crystal structure of e. coli k-12 yggs 0.9492 6 219
7uat-assembly1.cif.gz_A the crystal structure of the k36a mutant of e. coli yggs in complex with plp 0.9473 6 219
7ubp-assembly1.cif.gz_A the crystal structure of the k36a/k137a double mutant of e. coli yggs in complex with plp 0.9472 6 219
7uax-assembly1.cif.gz_A the crystal structure of the k36a/k38a double mutant of e. coli yggs in complex with plp 0.9463 6 218
7uau-assembly1.cif.gz_A the crystal structure of the k137a mutant of e. coli yggs in complex with plp 0.9457 6 219
ID Description Score Start End Superfamily
1w8gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9492 6 219 3.20.20.10
af_P9WFQ7_2_257_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9137 6 224 3.20.20.10
3r79B00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9106 6 219 3.20.20.10
af_Q9Z2Y8_11_258_3.20.20.10 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9087 5 224 3.20.20.10
1w8gA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9043 6 219 3.20.20.10
ID Description Score Start End GO Terms
AF-A0A2V8U0I5-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9914 6 222 GO:0030170
AF-A0A3N5KY13-F1-model_v4 YggS family pyridoxal phosphate-dependent enzyme 0.9903 6 97 GO:0030170
AF-A0A150RJB2-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9798 6 220 GO:0030170
AF-A0A3S5GY77-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9785 5 220 GO:0030170
AF-A0A2V8U0I5-F1-model_v4 Pyridoxal phosphate homeostasis protein (PLP homeostasis protein) 0.9779 6 222 GO:0030170

Map